AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene025899

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene025899.t1 MTR_7g117430 95.679 486 15 4 1 481 1 485 0.0 933
MS.gene025899.t1 MTR_1g111350 57.073 410 164 6 72 480 69 467 9.54e-145 423
MS.gene025899.t1 MTR_1g115210 46.259 441 225 8 47 480 51 486 2.94e-126 376
MS.gene025899.t1 MTR_1g039270 46.462 424 217 6 64 480 49 469 2.29e-119 358
MS.gene025899.t1 MTR_6g085010 49.647 425 188 10 72 480 77 491 4.88e-114 345
MS.gene025899.t1 MTR_2g028190 37.471 435 241 13 69 481 27 452 1.90e-87 275
MS.gene025899.t1 MTR_8g103880 39.353 371 213 8 108 473 85 448 3.46e-84 267
MS.gene025899.t1 MTR_3g097150 38.889 414 233 10 75 480 45 446 1.23e-83 265
MS.gene025899.t1 MTR_3g053710 36.607 448 232 11 54 481 52 467 3.25e-77 249
MS.gene025899.t1 MTR_5g091130 36.966 468 241 14 65 480 88 553 6.45e-77 251
MS.gene025899.t1 MTR_4g007740 35.763 439 248 11 62 480 53 477 7.89e-76 246
MS.gene025899.t1 MTR_3g046300 39.075 389 201 9 120 481 80 459 2.06e-75 244
MS.gene025899.t1 MTR_5g080890 38.764 356 198 12 136 480 85 431 1.52e-67 223
MS.gene025899.t1 MTR_5g044770 35.748 428 232 17 71 480 26 428 5.64e-66 219
MS.gene025899.t1 MTR_5g080960 38.764 356 198 12 136 480 85 431 5.65e-66 219
MS.gene025899.t1 MTR_3g053980 40.274 365 194 9 129 481 134 486 1.41e-65 219
MS.gene025899.t1 MTR_8g038280 35.104 433 237 18 69 480 24 433 4.75e-64 214
MS.gene025899.t1 MTR_8g096990 34.129 419 248 14 73 480 28 429 5.75e-63 211
MS.gene025899.t1 MTR_0036s0070 36.723 354 197 12 136 480 89 424 4.91e-61 206
MS.gene025899.t1 MTR_2g059460 37.534 373 201 11 125 480 47 404 1.10e-60 204
MS.gene025899.t1 MTR_3g028120 35.014 357 208 13 138 480 90 436 3.66e-59 201
MS.gene025899.t1 MTR_0036s0050 35.989 364 195 12 136 480 89 433 5.42e-58 198
MS.gene025899.t1 MTR_5g038360 36.141 368 211 16 126 480 78 434 1.58e-57 197
MS.gene025899.t1 MTR_2g059490 36.695 357 207 10 137 480 58 408 1.86e-57 197
MS.gene025899.t1 MTR_6g090290 33.886 422 250 13 73 480 28 434 4.02e-57 196
MS.gene025899.t1 MTR_0024s0040 36.313 358 200 13 138 480 64 408 6.35e-57 194
MS.gene025899.t1 MTR_2g067830 32.512 406 225 16 97 480 26 404 2.01e-56 193
MS.gene025899.t1 MTR_0036s0110 32.488 434 250 15 70 480 27 440 8.68e-56 192
MS.gene025899.t1 MTR_5g008110 34.719 409 227 16 92 480 25 413 2.46e-55 190
MS.gene025899.t1 MTR_8g038250 32.861 423 232 15 73 480 28 413 2.15e-53 185
MS.gene025899.t1 MTR_3g014290 36.000 350 209 6 135 480 78 416 2.54e-53 185
MS.gene025899.t1 MTR_1g037630 36.000 350 209 6 135 480 90 428 4.30e-53 185
MS.gene025899.t1 MTR_8g038310 32.000 425 230 17 73 480 29 411 4.39e-52 182
MS.gene025899.t1 MTR_4g109760 36.657 341 189 14 153 480 70 396 7.48e-51 178
MS.gene025899.t1 MTR_5g008150 32.331 399 234 14 102 480 28 410 1.18e-50 178
MS.gene025899.t1 MTR_5g008070 32.947 431 249 14 65 480 19 424 2.39e-50 177
MS.gene025899.t1 MTR_2g105300 32.164 342 196 14 156 477 54 379 2.30e-49 173
MS.gene025899.t1 MTR_5g044570 31.655 417 233 18 77 480 32 409 4.39e-49 174
MS.gene025899.t1 MTR_8g039540 31.579 437 264 13 60 480 16 433 4.66e-48 171
MS.gene025899.t1 MTR_6g088760 31.845 336 197 11 128 444 79 401 1.56e-46 169
MS.gene025899.t1 MTR_3g100500 34.699 366 220 8 124 481 84 438 8.90e-46 165
MS.gene025899.t1 MTR_4g045857 37.872 235 134 5 113 335 32 266 8.15e-41 148
MS.gene025899.t1 MTR_7g105850 30.414 411 226 16 117 481 70 466 1.41e-40 152
MS.gene025899.t1 MTR_5g012490 30.657 411 214 19 131 480 69 469 6.10e-39 147
MS.gene025899.t1 MTR_3g068000 31.830 377 204 18 144 481 80 442 8.56e-39 147
MS.gene025899.t1 MTR_2g055840 29.650 371 222 13 138 480 14 373 2.35e-38 144
MS.gene025899.t1 MTR_4g100990 30.488 410 217 18 131 480 69 470 2.71e-38 145
MS.gene025899.t1 MTR_5g077850 30.833 360 216 15 144 480 88 437 3.97e-38 144
MS.gene025899.t1 MTR_3g065160 28.090 445 268 20 60 480 10 426 1.85e-37 142
MS.gene025899.t1 MTR_1g060750 30.894 369 191 14 134 480 48 374 3.47e-37 140
MS.gene025899.t1 MTR_2g063110 29.040 427 236 18 112 481 93 509 3.85e-37 143
MS.gene025899.t1 MTR_5g077920 32.692 364 206 16 144 480 75 426 7.63e-32 127
MS.gene025899.t1 MTR_7g062360 30.400 375 214 20 142 481 64 426 1.38e-30 123
MS.gene025899.t1 MTR_2g070430 29.288 379 223 15 135 479 85 452 2.19e-30 123
MS.gene025899.t1 MTR_7g102750 27.493 371 233 13 136 480 80 440 4.46e-30 122
MS.gene025899.t1 MTR_7g080230 27.506 389 224 16 129 480 63 430 5.71e-30 122
MS.gene025899.t1 MTR_5g008090 33.013 312 165 15 193 480 21 312 8.49e-29 116
MS.gene025899.t1 MTR_6g084710 27.461 386 230 18 128 480 182 550 1.81e-28 119
MS.gene025899.t1 MTR_1g078240 26.371 383 238 14 129 480 61 430 1.15e-27 115
MS.gene025899.t1 MTR_5g016260 26.146 371 224 14 135 480 86 431 1.24e-27 116
MS.gene025899.t1 MTR_5g016260 26.146 371 224 14 135 480 86 431 1.45e-27 116
MS.gene025899.t1 MTR_4g056420 27.628 409 242 16 110 480 44 436 2.16e-27 115
MS.gene025899.t1 MTR_1g061940 27.105 380 229 14 134 480 80 444 7.91e-27 113
MS.gene025899.t1 MTR_1g078240 26.371 383 237 15 129 480 61 429 1.23e-26 112
MS.gene025899.t1 MTR_2g084550 28.140 430 255 16 78 480 35 437 2.60e-26 112
MS.gene025899.t1 MTR_8g075090 26.613 372 221 16 138 481 113 460 4.33e-26 110
MS.gene025899.t1 MTR_3g096930 27.660 376 219 17 136 481 83 435 9.79e-26 109
MS.gene025899.t1 MTR_7g102750 27.457 346 215 13 136 455 80 415 1.29e-25 109
MS.gene025899.t1 MTR_7g021510 26.649 379 228 17 136 480 71 433 3.18e-25 108
MS.gene025899.t1 MTR_8g094590 26.492 419 249 19 98 481 31 425 3.21e-25 108
MS.gene025899.t1 MTR_8g075090 26.415 371 221 16 138 480 113 459 3.51e-25 108
MS.gene025899.t1 MTR_4g095270 26.146 371 224 15 135 480 78 423 1.44e-24 107
MS.gene025899.t1 MTR_4g095270 26.613 372 221 16 135 480 78 423 1.83e-24 107
MS.gene025899.t1 MTR_1g078240 28.049 328 198 13 129 431 61 375 3.18e-24 104
MS.gene025899.t1 MTR_5g022880 27.394 376 213 17 138 480 113 461 3.26e-24 105
MS.gene025899.t1 MTR_6g084710 28.571 266 158 11 128 377 182 431 2.82e-23 103
MS.gene025899.t1 MTR_8g094590 27.249 378 220 18 98 444 31 384 3.41e-22 99.0
MS.gene025899.t1 MTR_8g075090 27.742 310 177 13 138 422 113 400 1.03e-21 98.2
MS.gene025899.t1 MTR_4g023650 26.506 415 241 21 108 481 29 420 3.81e-21 95.9
MS.gene025899.t1 MTR_1g029810 26.667 375 226 17 136 481 56 410 9.64e-21 94.7
MS.gene025899.t1 MTR_1g029810 26.260 377 225 17 136 481 56 410 2.10e-20 94.0
MS.gene025899.t1 MTR_5g080330 27.874 348 207 15 153 481 1 323 2.80e-20 93.6
MS.gene025899.t1 MTR_3g087780 25.067 371 232 12 138 481 100 451 3.66e-20 93.6
MS.gene025899.t1 MTR_8g094590 27.852 298 174 12 98 377 31 305 8.55e-20 90.5
MS.gene025899.t1 MTR_5g061690 26.630 368 227 14 138 481 102 450 2.50e-19 91.3
MS.gene025899.t1 MTR_8g075010 26.146 371 224 16 138 480 101 449 8.86e-18 86.3
MS.gene025899.t1 MTR_1g072380 25.897 390 226 17 137 476 56 432 7.66e-17 83.2
MS.gene025899.t1 MTR_2g022320 26.042 384 224 16 138 476 37 405 1.28e-16 82.0
MS.gene025899.t1 MTR_7g080230 26.347 334 193 15 179 480 48 360 4.53e-16 80.5
MS.gene025899.t1 MTR_1g072450 25.323 387 229 19 135 476 44 415 5.09e-16 80.5
MS.gene025899.t1 MTR_2g022480 25.234 321 187 14 138 420 50 355 1.48e-14 75.9
MS.gene025899.t1 MTR_2g022430 25.765 392 217 19 138 476 40 410 2.19e-13 72.4
MS.gene025899.t1 MTR_5g061690 25.817 306 193 12 191 481 25 311 3.42e-13 71.6
MS.gene025899.t1 MTR_2g022380 25.714 385 225 17 138 476 40 409 8.55e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene025899.t1 AT1G01300 75.055 457 102 4 35 480 29 484 0.0 645
MS.gene025899.t1 AT3G61820 65.051 495 146 11 1 480 1 483 0.0 567
MS.gene025899.t1 AT3G18490 48.207 502 221 15 11 480 6 500 2.82e-130 387
MS.gene025899.t1 AT1G25510 48.387 465 215 9 33 480 27 483 5.88e-129 383
MS.gene025899.t1 AT3G20015 47.630 422 209 6 67 480 53 470 5.06e-119 357
MS.gene025899.t1 AT5G10770 39.206 403 225 9 88 480 81 473 2.63e-83 265
MS.gene025899.t1 AT2G03200 36.768 427 234 13 75 480 47 458 2.35e-79 254
MS.gene025899.t1 AT5G10760 39.589 389 217 11 97 480 89 464 9.72e-74 240
MS.gene025899.t1 AT3G25700 38.084 407 213 17 108 480 48 449 7.42e-71 232
MS.gene025899.t1 AT2G42980 35.828 441 230 14 87 480 90 524 2.31e-68 228
MS.gene025899.t1 AT3G59080 39.474 380 202 11 125 480 157 532 7.45e-68 226
MS.gene025899.t1 AT5G33340 34.901 404 234 10 87 480 50 434 7.61e-68 224
MS.gene025899.t1 AT1G79720 34.259 432 249 12 71 480 64 482 1.12e-65 219
MS.gene025899.t1 AT3G54400 34.286 420 252 10 67 480 23 424 3.17e-62 209
MS.gene025899.t1 AT2G35615 33.483 445 258 14 59 480 14 443 2.25e-59 202
MS.gene025899.t1 AT1G64830 32.779 421 243 14 80 480 28 428 3.52e-59 201
MS.gene025899.t1 AT1G09750 35.262 363 221 8 127 481 93 449 7.86e-59 201
MS.gene025899.t1 AT3G59080 37.766 376 178 11 125 480 157 496 2.96e-58 200
MS.gene025899.t1 AT1G31450 33.256 430 252 16 71 480 27 441 8.18e-57 195
MS.gene025899.t1 AT3G12700 32.054 443 261 15 60 480 36 460 1.58e-47 171
MS.gene025899.t1 AT2G28040 31.653 357 201 11 137 480 64 390 7.52e-45 162
MS.gene025899.t1 AT2G28040 31.653 357 201 11 137 480 55 381 8.68e-45 161
MS.gene025899.t1 AT5G07030 32.394 355 221 10 135 481 112 455 4.60e-43 158
MS.gene025899.t1 AT2G28010 30.791 354 207 12 138 480 65 391 5.66e-43 157
MS.gene025899.t1 AT2G39710 32.249 369 205 15 142 476 69 426 5.40e-42 155
MS.gene025899.t1 AT5G02190 34.043 376 193 22 147 481 82 443 1.38e-41 154
MS.gene025899.t1 AT4G30040 30.986 355 216 12 138 475 85 427 1.66e-41 154
MS.gene025899.t1 AT2G28030 31.356 354 205 12 138 480 61 387 5.45e-41 151
MS.gene025899.t1 AT4G30030 31.180 356 220 15 138 481 78 420 2.09e-40 150
MS.gene025899.t1 AT3G52500 30.804 448 249 19 85 480 29 467 1.66e-39 149
MS.gene025899.t1 AT1G66180 32.687 361 207 19 144 480 78 426 2.24e-39 148
MS.gene025899.t1 AT5G37540 32.020 406 230 20 106 481 50 439 3.97e-39 147
MS.gene025899.t1 AT2G28220 30.641 359 205 13 138 480 67 397 2.31e-38 144
MS.gene025899.t1 AT2G28225 30.362 359 206 13 138 480 67 397 1.57e-37 142
MS.gene025899.t1 AT5G45120 28.398 412 232 17 127 480 72 478 7.87e-36 139
MS.gene025899.t1 AT5G36260 29.223 373 221 17 136 480 76 433 8.09e-33 130
MS.gene025899.t1 AT4G16563 32.581 399 189 17 155 480 100 491 2.11e-31 127
MS.gene025899.t1 AT5G22850 29.301 372 226 14 136 480 79 440 2.89e-31 126
MS.gene025899.t1 AT5G43100 26.829 369 223 14 135 480 73 417 1.07e-30 124
MS.gene025899.t1 AT5G43100 26.829 369 223 14 135 480 73 417 1.21e-30 125
MS.gene025899.t1 AT2G23945 26.906 446 278 22 65 480 21 448 9.00e-30 121
MS.gene025899.t1 AT3G02740 26.714 423 257 18 92 480 36 439 1.92e-28 118
MS.gene025899.t1 AT4G33490 28.232 379 215 18 136 481 58 412 6.42e-28 115
MS.gene025899.t1 AT3G02740 26.542 373 226 15 138 480 10 364 3.76e-27 113
MS.gene025899.t1 AT2G36670 27.568 370 233 13 136 480 98 457 2.15e-26 112
MS.gene025899.t1 AT2G36670 27.446 368 232 13 138 480 105 462 4.21e-26 111
MS.gene025899.t1 AT2G36670 27.717 368 231 14 138 480 34 391 5.42e-26 110
MS.gene025899.t1 AT2G36670 27.717 368 231 14 138 480 34 391 5.42e-26 110
MS.gene025899.t1 AT4G12920 25.128 390 234 12 117 481 32 388 2.53e-24 104
MS.gene025899.t1 AT2G17760 28.378 370 214 19 138 480 104 449 3.08e-24 105
MS.gene025899.t1 AT1G05840 25.397 378 232 16 136 480 78 438 7.95e-24 104
MS.gene025899.t1 AT1G65240 25.600 375 229 16 136 480 72 426 2.85e-23 102
MS.gene025899.t1 AT3G51340 25.056 443 272 19 73 480 30 447 6.08e-23 102
MS.gene025899.t1 AT3G50050 25.381 394 237 14 113 480 74 436 9.49e-23 102
MS.gene025899.t1 AT4G33490 28.613 346 193 17 136 451 55 376 1.57e-22 99.8
MS.gene025899.t1 AT3G51330 26.549 452 263 21 73 481 29 454 2.56e-21 96.7
MS.gene025899.t1 AT3G51330 26.608 451 262 21 73 480 29 453 2.72e-21 97.4
MS.gene025899.t1 AT1G08210 27.642 369 233 14 136 480 116 474 3.47e-21 97.1
MS.gene025899.t1 AT1G08210 27.642 369 233 14 136 480 130 488 3.62e-21 97.1
MS.gene025899.t1 AT3G25700 35.260 173 92 7 108 261 48 219 3.71e-21 95.1
MS.gene025899.t1 AT3G25700 37.037 135 77 6 352 480 215 347 3.69e-14 74.3
MS.gene025899.t1 AT1G08210 28.108 370 230 15 136 480 82 440 3.92e-21 96.7
MS.gene025899.t1 AT3G51350 25.272 368 233 13 138 480 102 452 3.40e-20 94.0
MS.gene025899.t1 AT3G51340 25.648 386 231 16 73 425 30 392 7.34e-20 92.0
MS.gene025899.t1 AT3G51340 24.503 453 274 20 73 480 30 459 1.77e-19 91.7
MS.gene025899.t1 AT3G51340 25.824 364 216 15 73 403 30 372 1.37e-18 87.8
MS.gene025899.t1 AT3G51330 26.995 426 242 21 73 455 29 428 2.78e-18 87.4
MS.gene025899.t1 AT3G42550 25.691 362 206 14 135 480 75 389 7.35e-17 83.2
MS.gene025899.t1 AT1G08210 27.711 332 207 13 136 444 82 403 8.65e-17 83.2
MS.gene025899.t1 AT3G51360 25.806 341 195 15 72 383 31 342 1.83e-13 72.0
MS.gene025899.t1 AT1G03220 24.242 396 228 19 133 476 39 414 1.67e-11 66.6

Find 142 sgRNAs with CRISPR-Local

Find 160 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGGAGAGTGATTCTTCTTT+TGG 0.170893 7.1:-802369 None:intergenic
CGCGTGGCGCGTGTGGCTTT+AGG 0.227012 7.1:+802885 MS.gene025899:CDS
TATTCAGCAGCAAGGGTTTC+GGG 0.242630 7.1:+803535 MS.gene025899:CDS
AATAGAAAGTATCGAGTTTA+GGG 0.273510 7.1:-803124 None:intergenic
GTTGGTGCTGCTGGTTTATT+AGG 0.281772 7.1:+802936 MS.gene025899:CDS
CACGCGCCACGCGCGTCTTT+CGG 0.291329 7.1:-802875 None:intergenic
TAATAGAAAGTATCGAGTTT+AGG 0.292382 7.1:-803125 None:intergenic
GATAAAGATTCGTCTGATTC+TGG 0.298910 7.1:-802327 None:intergenic
TGAAGCCAGTAGCGGATCTA+TGG 0.300042 7.1:-802515 None:intergenic
CTGCTTGCGAATAACATTTC+CGG 0.301592 7.1:-802674 None:intergenic
TTCTATTACGTTGGACTTCT+CGG 0.303284 7.1:+803140 MS.gene025899:CDS
GCGTGGCGCGTGTGGCTTTA+GGG 0.318817 7.1:+802886 MS.gene025899:CDS
GATACTTGCTTTGATTTATC+TGG 0.322152 7.1:+803359 MS.gene025899:CDS
TTGCACTGAGAGATGCATTT+AGG 0.324139 7.1:+803291 MS.gene025899:CDS
GGCGGAGTTATCATTGATTC+AGG 0.331058 7.1:+803233 MS.gene025899:CDS
AGGAGCACCGCATGGGATTC+CGG 0.333198 7.1:-802733 None:intergenic
TGACTCTGGCAGCATCTCTT+TGG 0.333372 7.1:-802458 None:intergenic
ATATTCAGCAGCAAGGGTTT+CGG 0.334919 7.1:+803534 MS.gene025899:CDS
GATTGAACCGGCGACCGGTT+TGG 0.338038 7.1:-802989 None:intergenic
ACCCTTCTACAACACTTTCA+TGG 0.345759 7.1:+802304 MS.gene025899:CDS
GGCACAGAATTACTTGATTC+CGG 0.349446 7.1:+803445 MS.gene025899:CDS
GGCGATGGGTCTTTCACTTT+CGG 0.355522 7.1:+802825 MS.gene025899:CDS
AATGATAACTCCGCCGTTTC+CGG 0.356163 7.1:-803225 None:intergenic
GGCCATGAAAGTGTTGTAGA+AGG 0.364631 7.1:-802306 None:intergenic
AGTTTGAGTATGTGTGTTAG+TGG 0.374005 7.1:-802247 None:intergenic
CATGCGGTGCTCCTCTTTGC+CGG 0.374955 7.1:+802742 MS.gene025899:CDS
TTGAGAAAGTCCGGAGACTA+TGG 0.378424 7.1:-802544 None:intergenic
CTCGATACTTTCTATTACGT+TGG 0.395207 7.1:+803131 MS.gene025899:CDS
CGTAGGAACGTGACTTTGTT+GGG 0.396292 7.1:-802710 None:intergenic
AGAAGGAGATGGCTAATAAC+AGG 0.397096 7.1:-802200 None:intergenic
ATCTTGCGAGCTCGCGGGTC+GGG 0.397716 7.1:+803567 MS.gene025899:CDS
TAGCCACACCACGTCACTTC+CGG 0.407176 7.1:-802637 None:intergenic
AGGTGCTGATGTGTCCCTTC+CGG 0.412328 7.1:+803424 MS.gene025899:CDS
TAATCTCATTCACACCCTTT+CGG 0.415131 7.1:-803596 None:intergenic
AAGAGAATTTCTGATTGAAC+CGG 0.429358 7.1:-803001 None:intergenic
ATGTTATTCGCAAGCAGATC+CGG 0.430664 7.1:+802680 MS.gene025899:CDS
ATGAGTGGTTTGTCCATCAT+TGG 0.431680 7.1:+803509 MS.gene025899:CDS
GCTGCTGGTTTATTAGGTCT+TGG 0.436699 7.1:+802942 MS.gene025899:CDS
TATTTCACTCGCATCGGCGT+TGG 0.442972 7.1:+802579 MS.gene025899:CDS
GAGGCGGAGACGCCACGAAC+TGG 0.443110 7.1:-803182 None:intergenic
TGTCAGTATCAAGTTTCTTA+CGG 0.448845 7.1:+802804 MS.gene025899:CDS
TGTAAGCAGGTCGAGTCAAT+CGG 0.453067 7.1:-803268 None:intergenic
GAAATTCTCTTATTGTCTTG+TGG 0.459018 7.1:+803013 MS.gene025899:CDS
CTGCTGAATATTACCAATGA+TGG 0.459225 7.1:-803522 None:intergenic
GCGTAGGAACGTGACTTTGT+TGG 0.461415 7.1:-802711 None:intergenic
TGGGTCTTCGGATTCGGGTA+TGG 0.461666 7.1:-802349 None:intergenic
TTCCGGTCCAAACCGGTCGC+CGG 0.464037 7.1:+802982 MS.gene025899:CDS
TGCCGGCGACTCGACACTGC+TGG 0.466483 7.1:+802759 MS.gene025899:CDS
TCTATTACGTTGGACTTCTC+GGG 0.468916 7.1:+803141 MS.gene025899:CDS
TCTCTTATTGTCTTGTGGAC+CGG 0.472788 7.1:+803018 MS.gene025899:CDS
AACCGGCGACCGGTTTGGAC+CGG 0.474663 7.1:-802984 None:intergenic
AAACTCGACACCGCCGGAAA+CGG 0.478325 7.1:+803212 MS.gene025899:CDS
AGTTTCTGCTTTGCTTTCGC+CGG 0.481212 7.1:+803482 MS.gene025899:CDS
TAATGAGAGTGTGAAGGAGA+AGG 0.487577 7.1:-802217 None:intergenic
GGACAAACCACTCATCGTTC+CGG 0.488760 7.1:-803501 None:intergenic
TTTCTGATTGAACCGGCGAC+CGG 0.493839 7.1:-802994 None:intergenic
GCCGCTGCCTTGAGAAAGTC+CGG 0.495381 7.1:-802553 None:intergenic
GAAGCCAGTAGCGGATCTAT+GGG 0.498743 7.1:-802514 None:intergenic
GTCGGTGGTGCTCCAGTTCG+TGG 0.500304 7.1:+803170 MS.gene025899:CDS
ATCAAGTTTCTTACGGCGAT+GGG 0.503051 7.1:+802811 MS.gene025899:CDS
GAAAGTGTTGTAGAAGGGTT+GGG 0.503412 7.1:-802300 None:intergenic
TGAGATGGAAGAGTTGTTGT+GGG 0.508451 7.1:-802431 None:intergenic
TGAAAGTGTTGTAGAAGGGT+TGG 0.509537 7.1:-802301 None:intergenic
AAAGACGCGCGTGGCGCGTG+TGG 0.510956 7.1:+802878 MS.gene025899:CDS
TATCAAGTTTCTTACGGCGA+TGG 0.511342 7.1:+802810 MS.gene025899:CDS
CATCTCTTTGGAGTCTGAGA+TGG 0.515518 7.1:-802446 None:intergenic
TCTCTATCTCCAACAATGGA+AGG 0.516165 7.1:+802153 None:intergenic
AACCAGCAGTGTCGAGTCGC+CGG 0.516796 7.1:-802761 None:intergenic
CGTCCCCATAGATCCGCTAC+TGG 0.516821 7.1:+802510 MS.gene025899:CDS
TTTGAGAAGTGGAGTGAACC+GGG 0.525991 7.1:-803099 None:intergenic
CTGAGAGATGCATTTAGGCT+TGG 0.527744 7.1:+803296 MS.gene025899:CDS
TTGAGTATGTGTGTTAGTGG+TGG 0.527925 7.1:-802244 None:intergenic
ATACTGACAAACCTTGCTCT+TGG 0.528974 7.1:-802790 None:intergenic
CTCTTCAAACTCGACACCGC+CGG 0.530466 7.1:+803206 MS.gene025899:CDS
TGGTGCTACGCATCTGAAGA+AGG 0.532453 7.1:+803316 MS.gene025899:CDS
TGGCTAATAACAGGAAGAGA+AGG 0.533278 7.1:-802191 None:intergenic
GAGTGTGAAGGAGAAGGAGA+TGG 0.533697 7.1:-802211 None:intergenic
TTCAGCAGCTCCATAGTCTC+CGG 0.534475 7.1:+802534 MS.gene025899:CDS
GCTTTCGCCGGAACGATGAG+TGG 0.540100 7.1:+803494 MS.gene025899:CDS
GGGTCGGGTTTGCACCGAAA+GGG 0.540863 7.1:+803582 MS.gene025899:CDS
GGCAAAGAGGAGCACCGCAT+GGG 0.541095 7.1:-802740 None:intergenic
TCTCTCAGTGCAATGTAAGC+AGG 0.541916 7.1:-803281 None:intergenic
CGGGTCGGGTTTGCACCGAA+AGG 0.542657 7.1:+803581 MS.gene025899:CDS
GCGCGTGTGGCTTTAGGGTG+TGG 0.542668 7.1:+802891 MS.gene025899:CDS
CTCGACACCGCCGGAAACGG+CGG 0.545168 7.1:+803215 MS.gene025899:CDS
GATCTTGCGAGCTCGCGGGT+CGG 0.545739 7.1:+803566 MS.gene025899:CDS
CGGCTGTTTCTCGAACCGCC+CGG 0.547042 7.1:+803081 MS.gene025899:CDS
CTGAGATGGAAGAGTTGTTG+TGG 0.551222 7.1:-802432 None:intergenic
CGGCAAAGAGGAGCACCGCA+TGG 0.553154 7.1:-802741 None:intergenic
ACCATGAAAACATACCTAGC+TGG 0.553972 7.1:-802606 None:intergenic
ATCTGGTCTGACGGAAGTGA+AGG 0.555136 7.1:+803376 MS.gene025899:CDS
GTAAGCAGGTCGAGTCAATC+GGG 0.555188 7.1:-803267 None:intergenic
TGTTGCGAAGGATTTGACTC+TGG 0.555494 7.1:-802472 None:intergenic
TGCGAATAACATTTCCGGCA+TGG 0.557017 7.1:-802669 None:intergenic
CTTTGATTTATCTGGTCTGA+CGG 0.557950 7.1:+803367 MS.gene025899:CDS
GGCTACAATGTGCGCCATGC+CGG 0.558061 7.1:+802655 MS.gene025899:CDS
TTGGTAATATTCAGCAGCAA+GGG 0.558689 7.1:+803528 MS.gene025899:CDS
GGAATCAAGTAATTCTGTGC+CGG 0.577242 7.1:-803443 None:intergenic
ATTGGTAATATTCAGCAGCA+AGG 0.580766 7.1:+803527 MS.gene025899:CDS
GGACTTCTCGGGATCAGTGT+CGG 0.581085 7.1:+803152 MS.gene025899:CDS
GTGTCGAGTCGCCGGCAAAG+AGG 0.582989 7.1:-802753 None:intergenic
TCGGAACGTGAGTGTTTCAG+TGG 0.583381 7.1:-802856 None:intergenic
GGTTTATTAGGTCTTGGTCG+TGG 0.585085 7.1:+802948 MS.gene025899:CDS
GGCGAATATTTCACTCGCAT+CGG 0.585714 7.1:+802573 MS.gene025899:CDS
ACCGCATGGGATTCCGGCGT+AGG 0.586025 7.1:-802727 None:intergenic
TTATGATCTTGCGAGCTCGC+GGG 0.587097 7.1:+803562 MS.gene025899:CDS
TTTGTTGAGAGCTGTTGCGA+AGG 0.589319 7.1:-802484 None:intergenic
TCAAGTAATTCTGTGCCGGA+AGG 0.590991 7.1:-803439 None:intergenic
ATAGTCTCCGGACTTTCTCA+AGG 0.594667 7.1:+802546 MS.gene025899:CDS
CTCTATCTCCAACAATGGAA+GGG 0.596956 7.1:+802154 None:intergenic
TGAAAATGAAGCACTAATGT+CGG 0.602965 7.1:-803401 None:intergenic
GTTATGATCTTGCGAGCTCG+CGG 0.603166 7.1:+803561 MS.gene025899:CDS
GAGATGGAAGAGTTGTTGTG+GGG 0.607914 7.1:-802430 None:intergenic
ACAAAGTCACGTTCCTACGC+CGG 0.611027 7.1:+802714 MS.gene025899:CDS
AAACTCCCACTGTTGTCCAC+CGG 0.611488 7.1:-803464 None:intergenic
TCGGCGTTGGAACTCCAGCT+AGG 0.613832 7.1:+802592 MS.gene025899:CDS
TGGTTGCAACACCAAGAGCA+AGG 0.613988 7.1:+802779 MS.gene025899:CDS
GGCTAATAACAGGAAGAGAA+GGG 0.614090 7.1:-802190 None:intergenic
TCCGGACTTTCTCAAGGCAG+CGG 0.615778 7.1:+802552 MS.gene025899:CDS
GATAACTCCGCCGTTTCCGG+CGG 0.625472 7.1:-803222 None:intergenic
TTGATTCCGGTGGACAACAG+TGG 0.625730 7.1:+803458 MS.gene025899:CDS
TACGCATCTGAAGAAGGCGC+CGG 0.628413 7.1:+803322 MS.gene025899:CDS
ACACCGGAAGTGACGTGGTG+TGG 0.630163 7.1:+802634 MS.gene025899:CDS
CTTCTCGGGATCAGTGTCGG+TGG 0.631380 7.1:+803155 MS.gene025899:CDS
GTCTATGTGGTGTAGCTGAA+GGG 0.633304 7.1:-802388 None:intergenic
TGATTCCGGTGGACAACAGT+GGG 0.634457 7.1:+803459 MS.gene025899:CDS
GTATCGAACAACGAAAACTC+CGG 0.636421 7.1:-803341 None:intergenic
CAAGTAATTCTGTGCCGGAA+GGG 0.643698 7.1:-803438 None:intergenic
CACGTTCCGAAAGACGCGCG+TGG 0.647276 7.1:+802869 MS.gene025899:CDS
TGTCTATGTGGTGTAGCTGA+AGG 0.647590 7.1:-802389 None:intergenic
TCTCGACACCGGAAGTGACG+TGG 0.648988 7.1:+802629 MS.gene025899:CDS
GCCATGAAAGTGTTGTAGAA+GGG 0.671272 7.1:-802305 None:intergenic
GGAGCTGCTGAAGCCAGTAG+CGG 0.671965 7.1:-802523 None:intergenic
ACAGAATTACTTGATTCCGG+TGG 0.679406 7.1:+803448 MS.gene025899:CDS
GGTGTCGAGTTTGAAGAGCG+AGG 0.684854 7.1:-803201 None:intergenic
CGGAGGAGAGAGTGTCTATG+TGG 0.693842 7.1:-802401 None:intergenic
TCCTACGCCGGAATCCCATG+CGG 0.708485 7.1:+802726 MS.gene025899:CDS
GGTTGTTAATGAGAGTGTGA+AGG 0.708906 7.1:-802223 None:intergenic
AAGCCAGTAGCGGATCTATG+GGG 0.720794 7.1:-802513 None:intergenic
GGGTGTGGACATGATAACGA+AGG 0.721683 7.1:+802906 MS.gene025899:CDS
GTCGAGTTTGAAGAGCGAGG+CGG 0.728421 7.1:-803198 None:intergenic
GAGAAGTGGAGTGAACCGGG+CGG 0.786995 7.1:-803096 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATAGAAAGTATCGAGTTTA+GGG - chr7.1:803127-803146 None:intergenic 25.0%
!!! TAATAGAAAGTATCGAGTTT+AGG - chr7.1:803128-803147 None:intergenic 25.0%
AAGAGAATTTCTGATTGAAC+CGG - chr7.1:803004-803023 None:intergenic 30.0%
GAAATTCTCTTATTGTCTTG+TGG + chr7.1:803013-803032 MS.gene025899:CDS 30.0%
TGTCAGTATCAAGTTTCTTA+CGG + chr7.1:802804-802823 MS.gene025899:CDS 30.0%
! ACATTAGTGCTTCATTTTCA+AGG + chr7.1:803404-803423 MS.gene025899:CDS 30.0%
! GATACTTGCTTTGATTTATC+TGG + chr7.1:803359-803378 MS.gene025899:CDS 30.0%
! TGAAAATGAAGCACTAATGT+CGG - chr7.1:803404-803423 None:intergenic 30.0%
AGTTTGAGTATGTGTGTTAG+TGG - chr7.1:802250-802269 None:intergenic 35.0%
CTCGATACTTTCTATTACGT+TGG + chr7.1:803131-803150 MS.gene025899:CDS 35.0%
CTGCTGAATATTACCAATGA+TGG - chr7.1:803525-803544 None:intergenic 35.0%
GATAAAGATTCGTCTGATTC+TGG - chr7.1:802330-802349 None:intergenic 35.0%
TTCTATTACGTTGGACTTCT+CGG + chr7.1:803140-803159 MS.gene025899:CDS 35.0%
! ATTGGTAATATTCAGCAGCA+AGG + chr7.1:803527-803546 MS.gene025899:CDS 35.0%
! CTTTGATTTATCTGGTCTGA+CGG + chr7.1:803367-803386 MS.gene025899:CDS 35.0%
! TCGTGGTAGATTATCTTTTC+CGG + chr7.1:802965-802984 MS.gene025899:CDS 35.0%
! TTGGTAATATTCAGCAGCAA+GGG + chr7.1:803528-803547 MS.gene025899:CDS 35.0%
!! AGTTTAGGGTTTTTGAGAAG+TGG - chr7.1:803113-803132 None:intergenic 35.0%
!! TGATTCTTCTTTTGGGTCTT+CGG - chr7.1:802364-802383 None:intergenic 35.0%
ACAGAATTACTTGATTCCGG+TGG + chr7.1:803448-803467 MS.gene025899:CDS 40.0%
ACCATGAAAACATACCTAGC+TGG - chr7.1:802609-802628 None:intergenic 40.0%
ACCCTTCTACAACACTTTCA+TGG + chr7.1:802304-802323 MS.gene025899:CDS 40.0%
AGAAGGAGATGGCTAATAAC+AGG - chr7.1:802203-802222 None:intergenic 40.0%
ATACTGACAAACCTTGCTCT+TGG - chr7.1:802793-802812 None:intergenic 40.0%
ATATTCAGCAGCAAGGGTTT+CGG + chr7.1:803534-803553 MS.gene025899:CDS 40.0%
ATCAAGTTTCTTACGGCGAT+GGG + chr7.1:802811-802830 MS.gene025899:CDS 40.0%
ATGTTATTCGCAAGCAGATC+CGG + chr7.1:802680-802699 MS.gene025899:CDS 40.0%
CTGCTTGCGAATAACATTTC+CGG - chr7.1:802677-802696 None:intergenic 40.0%
GACTTTGTTGGGTCAAAAAC+CGG - chr7.1:802702-802721 None:intergenic 40.0%
GGAATCAAGTAATTCTGTGC+CGG - chr7.1:803446-803465 None:intergenic 40.0%
GGCACAGAATTACTTGATTC+CGG + chr7.1:803445-803464 MS.gene025899:CDS 40.0%
GGCTAATAACAGGAAGAGAA+GGG - chr7.1:802193-802212 None:intergenic 40.0%
GTATCGAACAACGAAAACTC+CGG - chr7.1:803344-803363 None:intergenic 40.0%
TATCAAGTTTCTTACGGCGA+TGG + chr7.1:802810-802829 MS.gene025899:CDS 40.0%
TCACCAAAAACAACGGAAGA+CGG - chr7.1:803059-803078 None:intergenic 40.0%
TCTATTACGTTGGACTTCTC+GGG + chr7.1:803141-803160 MS.gene025899:CDS 40.0%
TCTCTTATTGTCTTGTGGAC+CGG + chr7.1:803018-803037 MS.gene025899:CDS 40.0%
TGAGATGGAAGAGTTGTTGT+GGG - chr7.1:802434-802453 None:intergenic 40.0%
TGGCTAATAACAGGAAGAGA+AGG - chr7.1:802194-802213 None:intergenic 40.0%
TTGAGTATGTGTGTTAGTGG+TGG - chr7.1:802247-802266 None:intergenic 40.0%
TTGCACTGAGAGATGCATTT+AGG + chr7.1:803291-803310 MS.gene025899:CDS 40.0%
! AGGGAGAGTGATTCTTCTTT+TGG - chr7.1:802372-802391 None:intergenic 40.0%
! ATGAGTGGTTTGTCCATCAT+TGG + chr7.1:803509-803528 MS.gene025899:CDS 40.0%
! GATAACGAAGGTCTTTTCGT+TGG + chr7.1:802918-802937 MS.gene025899:CDS 40.0%
! GGGAGAGTGATTCTTCTTTT+GGG - chr7.1:802371-802390 None:intergenic 40.0%
! GGTTGTTAATGAGAGTGTGA+AGG - chr7.1:802226-802245 None:intergenic 40.0%
! TAATGAGAGTGTGAAGGAGA+AGG - chr7.1:802220-802239 None:intergenic 40.0%
! TCCAGCTAGGTATGTTTTCA+TGG + chr7.1:802605-802624 MS.gene025899:CDS 40.0%
! TTATCTTTTCCGGTCCAAAC+CGG + chr7.1:802975-802994 MS.gene025899:CDS 40.0%
!! AAACCGTCTTCCGTTGTTTT+TGG + chr7.1:803053-803072 MS.gene025899:CDS 40.0%
!! GAAAGTGTTGTAGAAGGGTT+GGG - chr7.1:802303-802322 None:intergenic 40.0%
!! GCCATGAAAGTGTTGTAGAA+GGG - chr7.1:802308-802327 None:intergenic 40.0%
!! TGAAAGTGTTGTAGAAGGGT+TGG - chr7.1:802304-802323 None:intergenic 40.0%
!! TTCTTTTGGGTCTTCGGATT+CGG - chr7.1:802358-802377 None:intergenic 40.0%
!! TTTTGAGAAGTGGAGTGAAC+CGG - chr7.1:803103-803122 None:intergenic 40.0%
!!! TTCCGTTGTTTTTGGTGACT+CGG + chr7.1:803061-803080 MS.gene025899:CDS 40.0%
AATGATAACTCCGCCGTTTC+CGG - chr7.1:803228-803247 None:intergenic 45.0%
AGCCGAGTCACCAAAAACAA+CGG - chr7.1:803066-803085 None:intergenic 45.0%
AGTTTCTGCTTTGCTTTCGC+CGG + chr7.1:803482-803501 MS.gene025899:CDS 45.0%
ATAGTCTCCGGACTTTCTCA+AGG + chr7.1:802546-802565 MS.gene025899:CDS 45.0%
CAAGTAATTCTGTGCCGGAA+GGG - chr7.1:803441-803460 None:intergenic 45.0%
CGTAGGAACGTGACTTTGTT+GGG - chr7.1:802713-802732 None:intergenic 45.0%
CTGAGAGATGCATTTAGGCT+TGG + chr7.1:803296-803315 MS.gene025899:CDS 45.0%
CTGAGATGGAAGAGTTGTTG+TGG - chr7.1:802435-802454 None:intergenic 45.0%
GAGATGGAAGAGTTGTTGTG+GGG - chr7.1:802433-802452 None:intergenic 45.0%
GGCGAATATTTCACTCGCAT+CGG + chr7.1:802573-802592 MS.gene025899:CDS 45.0%
GGTTTATTAGGTCTTGGTCG+TGG + chr7.1:802948-802967 MS.gene025899:CDS 45.0%
GTCTATGTGGTGTAGCTGAA+GGG - chr7.1:802391-802410 None:intergenic 45.0%
TATTCAGCAGCAAGGGTTTC+GGG + chr7.1:803535-803554 MS.gene025899:CDS 45.0%
TCAAGTAATTCTGTGCCGGA+AGG - chr7.1:803442-803461 None:intergenic 45.0%
TCTCTCAGTGCAATGTAAGC+AGG - chr7.1:803284-803303 None:intergenic 45.0%
TGCGAATAACATTTCCGGCA+TGG - chr7.1:802672-802691 None:intergenic 45.0%
TGTAAGCAGGTCGAGTCAAT+CGG - chr7.1:803271-803290 None:intergenic 45.0%
TGTCTATGTGGTGTAGCTGA+AGG - chr7.1:802392-802411 None:intergenic 45.0%
TGTTGCGAAGGATTTGACTC+TGG - chr7.1:802475-802494 None:intergenic 45.0%
TTGAGAAAGTCCGGAGACTA+TGG - chr7.1:802547-802566 None:intergenic 45.0%
TTTGAGAAGTGGAGTGAACC+GGG - chr7.1:803102-803121 None:intergenic 45.0%
TTTGTTGAGAGCTGTTGCGA+AGG - chr7.1:802487-802506 None:intergenic 45.0%
! GTTTTCATGGTTCTCGACAC+CGG + chr7.1:802618-802637 MS.gene025899:CDS 45.0%
!! ACGGTTTTGATGTAGCAGAC+CGG - chr7.1:803040-803059 None:intergenic 45.0%
!! CATCTCTTTGGAGTCTGAGA+TGG - chr7.1:802449-802468 None:intergenic 45.0%
!! GAGTTGTTGTGGGGTTTTGT+CGG - chr7.1:802424-802443 None:intergenic 45.0%
!! GCTGCTGGTTTATTAGGTCT+TGG + chr7.1:802942-802961 MS.gene025899:CDS 45.0%
!! GGCCATGAAAGTGTTGTAGA+AGG - chr7.1:802309-802328 None:intergenic 45.0%
!! GGCGGAGTTATCATTGATTC+AGG + chr7.1:803233-803252 MS.gene025899:CDS 45.0%
!! GTTGGTGCTGCTGGTTTATT+AGG + chr7.1:802936-802955 MS.gene025899:CDS 45.0%
!! TCTTTTGGGTCTTCGGATTC+GGG - chr7.1:802357-802376 None:intergenic 45.0%
AAACTCCCACTGTTGTCCAC+CGG - chr7.1:803467-803486 None:intergenic 50.0%
ACAAAGTCACGTTCCTACGC+CGG + chr7.1:802714-802733 MS.gene025899:CDS 50.0%
ATCTGGTCTGACGGAAGTGA+AGG + chr7.1:803376-803395 MS.gene025899:CDS 50.0%
GAGTGTGAAGGAGAAGGAGA+TGG - chr7.1:802214-802233 None:intergenic 50.0%
GCGTAGGAACGTGACTTTGT+TGG - chr7.1:802714-802733 None:intergenic 50.0%
GGACAAACCACTCATCGTTC+CGG - chr7.1:803504-803523 None:intergenic 50.0%
GGCGATGGGTCTTTCACTTT+CGG + chr7.1:802825-802844 MS.gene025899:CDS 50.0%
GTAAGCAGGTCGAGTCAATC+GGG - chr7.1:803270-803289 None:intergenic 50.0%
GTTATGATCTTGCGAGCTCG+CGG + chr7.1:803561-803580 MS.gene025899:CDS 50.0%
TCGGAACGTGAGTGTTTCAG+TGG - chr7.1:802859-802878 None:intergenic 50.0%
TGACTCTGGCAGCATCTCTT+TGG - chr7.1:802461-802480 None:intergenic 50.0%
TGATTCCGGTGGACAACAGT+GGG + chr7.1:803459-803478 MS.gene025899:CDS 50.0%
TGGTTGCAACACCAAGAGCA+AGG + chr7.1:802779-802798 MS.gene025899:CDS 50.0%
TTATGATCTTGCGAGCTCGC+GGG + chr7.1:803562-803581 MS.gene025899:CDS 50.0%
TTCAGCAGCTCCATAGTCTC+CGG + chr7.1:802534-802553 MS.gene025899:CDS 50.0%
TTGATTCCGGTGGACAACAG+TGG + chr7.1:803458-803477 MS.gene025899:CDS 50.0%
TTTCTGATTGAACCGGCGAC+CGG - chr7.1:802997-803016 None:intergenic 50.0%
! GGGTGTGGACATGATAACGA+AGG + chr7.1:802906-802925 MS.gene025899:CDS 50.0%
! TATTTCACTCGCATCGGCGT+TGG + chr7.1:802579-802598 MS.gene025899:CDS 50.0%
!! AAGCCAGTAGCGGATCTATG+GGG - chr7.1:802516-802535 None:intergenic 50.0%
!! GAAGCCAGTAGCGGATCTAT+GGG - chr7.1:802517-802536 None:intergenic 50.0%
!! TGAAGCCAGTAGCGGATCTA+TGG - chr7.1:802518-802537 None:intergenic 50.0%
!! TGGTGCTACGCATCTGAAGA+AGG + chr7.1:803316-803335 MS.gene025899:CDS 50.0%
!! TTGTTGTGGGGTTTTGTCGG+AGG - chr7.1:802421-802440 None:intergenic 50.0%
AAACTCGACACCGCCGGAAA+CGG + chr7.1:803212-803231 MS.gene025899:CDS 55.0%
CTCTTCAAACTCGACACCGC+CGG + chr7.1:803206-803225 MS.gene025899:CDS 55.0%
GGACTTCTCGGGATCAGTGT+CGG + chr7.1:803152-803171 MS.gene025899:CDS 55.0%
GTCGAGTTTGAAGAGCGAGG+CGG - chr7.1:803201-803220 None:intergenic 55.0%
TAGCCACACCACGTCACTTC+CGG - chr7.1:802640-802659 None:intergenic 55.0%
TCCGGACTTTCTCAAGGCAG+CGG + chr7.1:802552-802571 MS.gene025899:CDS 55.0%
TGGGTCTTCGGATTCGGGTA+TGG - chr7.1:802352-802371 None:intergenic 55.0%
! GGTGTCGAGTTTGAAGAGCG+AGG - chr7.1:803204-803223 None:intergenic 55.0%
! TACGCATCTGAAGAAGGCGC+CGG + chr7.1:803322-803341 MS.gene025899:CDS 55.0%
!! AGGTGCTGATGTGTCCCTTC+CGG + chr7.1:803424-803443 MS.gene025899:CDS 55.0%
!! CGGAGGAGAGAGTGTCTATG+TGG - chr7.1:802404-802423 None:intergenic 55.0%
!!! GGTCTTTTCGTTGGTGCTGC+TGG + chr7.1:802927-802946 MS.gene025899:CDS 55.0%
ACACCGGAAGTGACGTGGTG+TGG + chr7.1:802634-802653 MS.gene025899:CDS 60.0%
CATGCGGTGCTCCTCTTTGC+CGG + chr7.1:802742-802761 MS.gene025899:CDS 60.0%
CGTCCCCATAGATCCGCTAC+TGG + chr7.1:802510-802529 MS.gene025899:CDS 60.0%
GAGAAGTGGAGTGAACCGGG+CGG - chr7.1:803099-803118 None:intergenic 60.0%
GATAACTCCGCCGTTTCCGG+CGG - chr7.1:803225-803244 None:intergenic 60.0%
GATTGAACCGGCGACCGGTT+TGG - chr7.1:802992-803011 None:intergenic 60.0%
GCCGCTGCCTTGAGAAAGTC+CGG - chr7.1:802556-802575 None:intergenic 60.0%
GCTTTCGCCGGAACGATGAG+TGG + chr7.1:803494-803513 MS.gene025899:CDS 60.0%
GGAGCTGCTGAAGCCAGTAG+CGG - chr7.1:802526-802545 None:intergenic 60.0%
GGCTACAATGTGCGCCATGC+CGG + chr7.1:802655-802674 MS.gene025899:CDS 60.0%
GGGTCGGGTTTGCACCGAAA+GGG + chr7.1:803582-803601 MS.gene025899:CDS 60.0%
TCCTACGCCGGAATCCCATG+CGG + chr7.1:802726-802745 MS.gene025899:CDS 60.0%
TCTCGACACCGGAAGTGACG+TGG + chr7.1:802629-802648 MS.gene025899:CDS 60.0%
! AACCAGCAGTGTCGAGTCGC+CGG - chr7.1:802764-802783 None:intergenic 60.0%
! CTTCTCGGGATCAGTGTCGG+TGG + chr7.1:803155-803174 MS.gene025899:CDS 60.0%
! TCGGCGTTGGAACTCCAGCT+AGG + chr7.1:802592-802611 MS.gene025899:CDS 60.0%
!! AGGAGCACCGCATGGGATTC+CGG - chr7.1:802736-802755 None:intergenic 60.0%
!! GGCAAAGAGGAGCACCGCAT+GGG - chr7.1:802743-802762 None:intergenic 60.0%
ACCGCATGGGATTCCGGCGT+AGG - chr7.1:802730-802749 None:intergenic 65.0%
ATCTTGCGAGCTCGCGGGTC+GGG + chr7.1:803567-803586 MS.gene025899:CDS 65.0%
CACGTTCCGAAAGACGCGCG+TGG + chr7.1:802869-802888 MS.gene025899:CDS 65.0%
CGGGTCGGGTTTGCACCGAA+AGG + chr7.1:803581-803600 MS.gene025899:CDS 65.0%
GATCTTGCGAGCTCGCGGGT+CGG + chr7.1:803566-803585 MS.gene025899:CDS 65.0%
GTCGGTGGTGCTCCAGTTCG+TGG + chr7.1:803170-803189 MS.gene025899:CDS 65.0%
GTGTCGAGTCGCCGGCAAAG+AGG - chr7.1:802756-802775 None:intergenic 65.0%
TTCCGGTCCAAACCGGTCGC+CGG + chr7.1:802982-803001 MS.gene025899:CDS 65.0%
! GCGTGGCGCGTGTGGCTTTA+GGG + chr7.1:802886-802905 MS.gene025899:CDS 65.0%
!! AACCGGCGACCGGTTTGGAC+CGG - chr7.1:802987-803006 None:intergenic 65.0%
!! CGGCAAAGAGGAGCACCGCA+TGG - chr7.1:802744-802763 None:intergenic 65.0%
!! CGGCTGTTTCTCGAACCGCC+CGG + chr7.1:803081-803100 MS.gene025899:CDS 65.0%
!! GCGCGTGTGGCTTTAGGGTG+TGG + chr7.1:802891-802910 MS.gene025899:CDS 65.0%
AAAGACGCGCGTGGCGCGTG+TGG + chr7.1:802878-802897 MS.gene025899:CDS 70.0%
CACGCGCCACGCGCGTCTTT+CGG - chr7.1:802878-802897 None:intergenic 70.0%
CGCGTGGCGCGTGTGGCTTT+AGG + chr7.1:802885-802904 MS.gene025899:CDS 70.0%
CTCGACACCGCCGGAAACGG+CGG + chr7.1:803215-803234 MS.gene025899:CDS 70.0%
GAGGCGGAGACGCCACGAAC+TGG - chr7.1:803185-803204 None:intergenic 70.0%
TGCCGGCGACTCGACACTGC+TGG + chr7.1:802759-802778 MS.gene025899:CDS 70.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 802168 803613 802168 ID=MS.gene025899
chr7.1 mRNA 802168 803613 802168 ID=MS.gene025899.t1;Parent=MS.gene025899
chr7.1 exon 802168 803613 802168 ID=MS.gene025899.t1.exon1;Parent=MS.gene025899.t1
chr7.1 CDS 802168 803613 802168 ID=cds.MS.gene025899.t1;Parent=MS.gene025899.t1
Gene Sequence

>MS.gene025899

ATGGAAGGGAACAATAACAAAACCCTTCTCTTCCTGTTATTAGCCATCTCCTTCTCCTTCACACTCTCATTAACAACCACCACTAACACACATACTCAAACTCAAACTCAAACTCTTTCTATTCGCTCTCTTCCCAACCCTTCTACAACACTTTCATGGCCAGAATCAGACGAATCTTTATCCATACCCGAATCCGAAGACCCAAAAGAAGAATCACTCTCCCTTCAGCTACACCACATAGACACTCTCTCCTCCGACAAAACCCCACAACAACTCTTCCATCTCAGACTCCAAAGAGATGCTGCCAGAGTCAAATCCTTCGCAACAGCTCTCAACAAAACTCGTCCCCATAGATCCGCTACTGGCTTCAGCAGCTCCATAGTCTCCGGACTTTCTCAAGGCAGCGGCGAATATTTCACTCGCATCGGCGTTGGAACTCCAGCTAGGTATGTTTTCATGGTTCTCGACACCGGAAGTGACGTGGTGTGGCTACAATGTGCGCCATGCCGGAAATGTTATTCGCAAGCAGATCCGGTTTTTGACCCAACAAAGTCACGTTCCTACGCCGGAATCCCATGCGGTGCTCCTCTTTGCCGGCGACTCGACACTGCTGGTTGCAACACCAAGAGCAAGGTTTGTCAGTATCAAGTTTCTTACGGCGATGGGTCTTTCACTTTCGGTGATTTCTCCACTGAAACACTCACGTTCCGAAAGACGCGCGTGGCGCGTGTGGCTTTAGGGTGTGGACATGATAACGAAGGTCTTTTCGTTGGTGCTGCTGGTTTATTAGGTCTTGGTCGTGGTAGATTATCTTTTCCGGTCCAAACCGGTCGCCGGTTCAATCAGAAATTCTCTTATTGTCTTGTGGACCGGTCTGCTACATCAAAACCGTCTTCCGTTGTTTTTGGTGACTCGGCTGTTTCTCGAACCGCCCGGTTCACTCCACTTCTCAAAAACCCTAAACTCGATACTTTCTATTACGTTGGACTTCTCGGGATCAGTGTCGGTGGTGCTCCAGTTCGTGGCGTCTCCGCCTCGCTCTTCAAACTCGACACCGCCGGAAACGGCGGAGTTATCATTGATTCAGGAACTTCAGTAACCCGATTGACTCGACCTGCTTACATTGCACTGAGAGATGCATTTAGGCTTGGTGCTACGCATCTGAAGAAGGCGCCGGAGTTTTCGTTGTTCGATACTTGCTTTGATTTATCTGGTCTGACGGAAGTGAAGGTGCCGACATTAGTGCTTCATTTTCAAGGTGCTGATGTGTCCCTTCCGGCACAGAATTACTTGATTCCGGTGGACAACAGTGGGAGTTTCTGCTTTGCTTTCGCCGGAACGATGAGTGGTTTGTCCATCATTGGTAATATTCAGCAGCAAGGGTTTCGGGTCAGTTATGATCTTGCGAGCTCGCGGGTCGGGTTTGCACCGAAAGGGTGTGAATGA
Protein sequence

>MS.gene025899.t1

MEGNNNKTLLFLLLAISFSFTLSLTTTTNTHTQTQTQTLSIRSLPNPSTTLSWPESDESLSIPESEDPKEESLSLQLHHIDTLSSDKTPQQLFHLRLQRDAARVKSFATALNKTRPHRSATGFSSSIVSGLSQGSGEYFTRIGVGTPARYVFMVLDTGSDVVWLQCAPCRKCYSQADPVFDPTKSRSYAGIPCGAPLCRRLDTAGCNTKSKVCQYQVSYGDGSFTFGDFSTETLTFRKTRVARVALGCGHDNEGLFVGAAGLLGLGRGRLSFPVQTGRRFNQKFSYCLVDRSATSKPSSVVFGDSAVSRTARFTPLLKNPKLDTFYYVGLLGISVGGAPVRGVSASLFKLDTAGNGGVIIDSGTSVTRLTRPAYIALRDAFRLGATHLKKAPEFSLFDTCFDLSGLTEVKVPTLVLHFQGADVSLPAQNYLIPVDNSGSFCFAFAGTMSGLSIIGNIQQQGFRVSYDLASSRVGFAPKGCE