AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene050655

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050655.t1 MTR_7g117430 95.062 486 14 4 1 477 1 485 0.0 927
MS.gene050655.t1 MTR_1g111350 57.073 410 164 6 68 476 69 467 6.25e-145 423
MS.gene050655.t1 MTR_1g115210 46.833 442 221 9 43 476 51 486 2.41e-126 376
MS.gene050655.t1 MTR_1g039270 46.462 424 217 6 60 476 49 469 2.55e-119 358
MS.gene050655.t1 MTR_6g085010 49.647 425 188 10 68 476 77 491 2.84e-114 345
MS.gene050655.t1 MTR_2g028190 37.471 435 241 13 65 477 27 452 1.48e-87 275
MS.gene050655.t1 MTR_8g103880 39.353 371 213 8 104 469 85 448 3.21e-84 267
MS.gene050655.t1 MTR_3g097150 39.518 415 229 12 71 476 45 446 1.21e-83 265
MS.gene050655.t1 MTR_3g053710 36.607 448 232 11 50 477 52 467 1.65e-77 250
MS.gene050655.t1 MTR_5g091130 36.966 468 241 14 61 476 88 553 5.19e-77 251
MS.gene050655.t1 MTR_4g007740 35.763 439 248 11 58 476 53 477 7.44e-76 246
MS.gene050655.t1 MTR_3g046300 38.817 389 202 9 116 477 80 459 1.49e-75 244
MS.gene050655.t1 MTR_5g080890 38.764 356 198 12 132 476 85 431 1.08e-67 223
MS.gene050655.t1 MTR_5g044770 35.748 428 232 17 67 476 26 428 4.93e-66 219
MS.gene050655.t1 MTR_5g080960 38.764 356 198 12 132 476 85 431 6.64e-66 218
MS.gene050655.t1 MTR_3g053980 40.274 365 194 9 125 477 134 486 1.21e-65 219
MS.gene050655.t1 MTR_8g038280 35.104 433 237 18 65 476 24 433 5.83e-64 213
MS.gene050655.t1 MTR_8g096990 34.286 420 246 15 69 476 28 429 6.77e-63 211
MS.gene050655.t1 MTR_0036s0070 36.723 354 197 12 132 476 89 424 5.10e-61 206
MS.gene050655.t1 MTR_2g059460 37.534 373 201 11 121 476 47 404 8.68e-61 204
MS.gene050655.t1 MTR_3g028120 35.014 357 208 13 134 476 90 436 3.39e-59 201
MS.gene050655.t1 MTR_0036s0050 35.989 364 195 12 132 476 89 433 5.09e-58 198
MS.gene050655.t1 MTR_5g038360 36.141 368 211 16 122 476 78 434 1.38e-57 197
MS.gene050655.t1 MTR_2g059490 36.695 357 207 10 133 476 58 408 2.13e-57 196
MS.gene050655.t1 MTR_6g090290 33.886 422 250 13 69 476 28 434 3.55e-57 196
MS.gene050655.t1 MTR_0024s0040 36.313 358 200 13 134 476 64 408 6.56e-57 194
MS.gene050655.t1 MTR_2g067830 32.512 406 225 16 93 476 26 404 2.42e-56 192
MS.gene050655.t1 MTR_0036s0110 32.488 434 250 15 66 476 27 440 4.99e-56 192
MS.gene050655.t1 MTR_5g008110 34.719 409 227 16 88 476 25 413 1.84e-55 191
MS.gene050655.t1 MTR_8g038250 32.861 423 232 15 69 476 28 413 2.13e-53 185
MS.gene050655.t1 MTR_3g014290 36.000 350 209 6 131 476 78 416 2.25e-53 185
MS.gene050655.t1 MTR_1g037630 36.000 350 209 6 131 476 90 428 3.09e-53 185
MS.gene050655.t1 MTR_8g038310 32.000 425 230 17 69 476 29 411 4.90e-52 181
MS.gene050655.t1 MTR_4g109760 36.657 341 189 14 149 476 70 396 8.02e-51 178
MS.gene050655.t1 MTR_5g008150 32.331 399 234 14 98 476 28 410 9.45e-51 178
MS.gene050655.t1 MTR_5g008070 32.947 431 249 14 61 476 19 424 2.35e-50 177
MS.gene050655.t1 MTR_2g105300 32.164 342 196 14 152 473 54 379 1.60e-49 174
MS.gene050655.t1 MTR_5g044570 31.655 417 233 18 73 476 32 409 4.38e-49 173
MS.gene050655.t1 MTR_8g039540 31.579 437 264 13 56 476 16 433 3.79e-48 171
MS.gene050655.t1 MTR_6g088760 31.845 336 197 11 124 440 79 401 1.67e-46 169
MS.gene050655.t1 MTR_3g100500 34.699 366 220 8 120 477 84 438 7.96e-46 165
MS.gene050655.t1 MTR_4g045857 37.872 235 134 5 109 331 32 266 7.93e-41 148
MS.gene050655.t1 MTR_7g105850 30.414 411 226 16 113 477 70 466 1.59e-40 151
MS.gene050655.t1 MTR_5g012490 30.657 411 214 19 127 476 69 469 5.00e-39 147
MS.gene050655.t1 MTR_3g068000 31.830 377 204 18 140 477 80 442 6.81e-39 147
MS.gene050655.t1 MTR_2g055840 29.650 371 222 13 134 476 14 373 1.95e-38 144
MS.gene050655.t1 MTR_4g100990 30.732 410 216 18 127 476 69 470 2.25e-38 146
MS.gene050655.t1 MTR_5g077850 30.833 360 216 15 140 476 88 437 3.01e-38 145
MS.gene050655.t1 MTR_3g065160 28.090 445 268 20 56 476 10 426 1.54e-37 142
MS.gene050655.t1 MTR_1g060750 30.894 369 191 14 130 476 48 374 2.41e-37 141
MS.gene050655.t1 MTR_2g063110 29.040 427 236 18 108 477 93 509 2.57e-37 143
MS.gene050655.t1 MTR_5g077920 32.692 364 206 16 140 476 75 426 6.95e-32 127
MS.gene050655.t1 MTR_7g062360 30.400 375 214 20 138 477 64 426 1.03e-30 124
MS.gene050655.t1 MTR_2g070430 29.288 379 223 15 131 475 85 452 2.39e-30 123
MS.gene050655.t1 MTR_7g102750 27.493 371 233 13 132 476 80 440 2.83e-30 123
MS.gene050655.t1 MTR_7g080230 27.506 389 224 16 125 476 63 430 4.98e-30 122
MS.gene050655.t1 MTR_5g008090 33.013 312 165 15 189 476 21 312 9.72e-29 115
MS.gene050655.t1 MTR_6g084710 27.461 386 230 18 124 476 182 550 1.35e-28 119
MS.gene050655.t1 MTR_1g078240 26.371 383 238 14 125 476 61 430 1.01e-27 115
MS.gene050655.t1 MTR_5g016260 26.146 371 224 14 131 476 86 431 1.09e-27 116
MS.gene050655.t1 MTR_5g016260 26.146 371 224 14 131 476 86 431 1.61e-27 116
MS.gene050655.t1 MTR_4g056420 27.603 413 245 16 102 476 40 436 1.97e-27 115
MS.gene050655.t1 MTR_1g061940 27.105 380 229 14 130 476 80 444 8.98e-27 113
MS.gene050655.t1 MTR_1g078240 26.371 383 237 15 125 476 61 429 1.25e-26 112
MS.gene050655.t1 MTR_2g084550 28.140 430 255 16 74 476 35 437 2.40e-26 112
MS.gene050655.t1 MTR_8g075090 26.613 372 221 16 134 477 113 460 4.44e-26 110
MS.gene050655.t1 MTR_3g096930 27.660 376 219 17 132 477 83 435 6.88e-26 110
MS.gene050655.t1 MTR_7g102750 27.457 346 215 13 132 451 80 415 1.08e-25 109
MS.gene050655.t1 MTR_7g021510 26.649 379 228 17 132 476 71 433 2.61e-25 108
MS.gene050655.t1 MTR_8g075090 26.415 371 221 16 134 476 113 459 3.10e-25 108
MS.gene050655.t1 MTR_8g094590 26.492 419 249 19 94 477 31 425 3.21e-25 108
MS.gene050655.t1 MTR_4g095270 26.146 371 224 14 131 476 78 423 1.39e-24 107
MS.gene050655.t1 MTR_4g095270 26.613 372 221 16 131 476 78 423 1.57e-24 107
MS.gene050655.t1 MTR_1g078240 28.049 328 198 13 125 427 61 375 2.26e-24 104
MS.gene050655.t1 MTR_5g022880 27.394 376 213 17 134 476 113 461 3.02e-24 105
MS.gene050655.t1 MTR_6g084710 28.571 266 158 11 124 373 182 431 2.00e-23 103
MS.gene050655.t1 MTR_8g094590 27.249 378 220 18 94 440 31 384 3.63e-22 99.0
MS.gene050655.t1 MTR_8g075090 27.742 310 177 13 134 418 113 400 8.39e-22 98.2
MS.gene050655.t1 MTR_4g023650 26.506 415 241 21 104 477 29 420 3.40e-21 95.9
MS.gene050655.t1 MTR_1g029810 26.667 375 226 17 132 477 56 410 1.04e-20 94.4
MS.gene050655.t1 MTR_1g029810 26.260 377 225 17 132 477 56 410 2.14e-20 94.0
MS.gene050655.t1 MTR_5g080330 27.874 348 207 15 149 477 1 323 3.13e-20 93.2
MS.gene050655.t1 MTR_3g087780 25.067 371 232 12 134 477 100 451 4.45e-20 93.6
MS.gene050655.t1 MTR_8g094590 27.852 298 174 12 94 373 31 305 6.60e-20 90.5
MS.gene050655.t1 MTR_5g061690 26.630 368 227 14 134 477 102 450 1.95e-19 91.3
MS.gene050655.t1 MTR_8g075010 26.146 371 224 16 134 476 101 449 8.41e-18 86.3
MS.gene050655.t1 MTR_1g072380 25.897 390 226 17 133 472 56 432 6.42e-17 83.2
MS.gene050655.t1 MTR_2g022320 26.042 384 224 16 134 472 37 405 1.04e-16 82.4
MS.gene050655.t1 MTR_7g080230 26.347 334 193 15 175 476 48 360 4.65e-16 80.5
MS.gene050655.t1 MTR_1g072450 25.323 387 229 19 131 472 44 415 5.12e-16 80.5
MS.gene050655.t1 MTR_2g022480 24.922 321 188 14 134 416 50 355 1.52e-14 75.9
MS.gene050655.t1 MTR_2g022430 25.510 392 218 19 134 472 40 410 2.04e-13 72.4
MS.gene050655.t1 MTR_5g061690 25.817 306 193 12 187 477 25 311 3.64e-13 71.2
MS.gene050655.t1 MTR_2g022380 25.714 385 225 17 134 472 40 409 8.19e-12 67.4
MS.gene050655.t1 MTR_2g022370 25.393 382 226 17 134 472 40 405 9.78e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene050655.t1 AT1G01300 79.469 414 78 2 69 476 72 484 0.0 645
MS.gene050655.t1 AT3G61820 65.173 491 148 10 1 476 1 483 0.0 571
MS.gene050655.t1 AT3G18490 47.723 505 217 15 9 476 6 500 1.18e-130 388
MS.gene050655.t1 AT1G25510 50.461 434 190 9 60 476 58 483 5.31e-129 383
MS.gene050655.t1 AT3G20015 47.630 422 209 6 63 476 53 470 9.98e-119 356
MS.gene050655.t1 AT5G10770 39.206 403 225 9 84 476 81 473 2.44e-83 265
MS.gene050655.t1 AT2G03200 36.768 427 234 13 71 476 47 458 3.77e-79 254
MS.gene050655.t1 AT5G10760 39.589 389 217 11 93 476 89 464 8.43e-74 240
MS.gene050655.t1 AT3G25700 37.685 406 216 15 104 476 48 449 7.89e-71 232
MS.gene050655.t1 AT2G42980 35.828 441 230 14 83 476 90 524 1.93e-68 228
MS.gene050655.t1 AT5G33340 34.901 404 234 10 83 476 50 434 5.48e-68 224
MS.gene050655.t1 AT3G59080 39.474 380 202 11 121 476 157 532 6.77e-68 226
MS.gene050655.t1 AT1G79720 34.259 432 249 12 67 476 64 482 1.56e-65 219
MS.gene050655.t1 AT3G54400 34.286 420 252 10 63 476 23 424 3.02e-62 209
MS.gene050655.t1 AT2G35615 33.483 445 258 14 55 476 14 443 2.24e-59 202
MS.gene050655.t1 AT1G64830 32.779 421 243 14 76 476 28 428 2.84e-59 201
MS.gene050655.t1 AT1G09750 35.262 363 221 8 123 477 93 449 9.87e-59 200
MS.gene050655.t1 AT3G59080 37.766 376 178 11 121 476 157 496 3.34e-58 200
MS.gene050655.t1 AT1G31450 33.256 430 252 16 67 476 27 441 7.60e-57 195
MS.gene050655.t1 AT3G12700 32.054 443 261 15 56 476 36 460 1.42e-47 171
MS.gene050655.t1 AT2G28040 31.653 357 201 11 133 476 64 390 6.54e-45 162
MS.gene050655.t1 AT2G28040 31.653 357 201 11 133 476 55 381 6.74e-45 162
MS.gene050655.t1 AT5G07030 32.394 355 221 10 131 477 112 455 4.22e-43 158
MS.gene050655.t1 AT2G28010 30.791 354 207 12 134 476 65 391 5.53e-43 157
MS.gene050655.t1 AT2G39710 32.249 369 205 15 138 472 69 426 4.49e-42 155
MS.gene050655.t1 AT4G30040 30.986 355 216 12 134 471 85 427 1.21e-41 154
MS.gene050655.t1 AT5G02190 34.043 376 193 22 143 477 82 443 1.38e-41 154
MS.gene050655.t1 AT2G28030 31.356 354 205 12 134 476 61 387 4.40e-41 151
MS.gene050655.t1 AT4G30030 31.180 356 220 15 134 477 78 420 1.88e-40 150
MS.gene050655.t1 AT3G52500 30.804 448 249 19 81 476 29 467 2.03e-39 149
MS.gene050655.t1 AT1G66180 32.687 361 207 19 140 476 78 426 2.07e-39 148
MS.gene050655.t1 AT5G37540 32.020 406 230 20 102 477 50 439 4.39e-39 147
MS.gene050655.t1 AT2G28220 30.641 359 205 13 134 476 67 397 2.12e-38 144
MS.gene050655.t1 AT2G28225 30.362 359 206 13 134 476 67 397 1.75e-37 142
MS.gene050655.t1 AT5G45120 28.928 401 222 17 134 476 83 478 6.50e-36 139
MS.gene050655.t1 AT5G36260 29.223 373 221 17 132 476 76 433 5.49e-33 131
MS.gene050655.t1 AT4G16563 32.581 399 189 17 151 476 100 491 2.10e-31 126
MS.gene050655.t1 AT5G22850 29.301 372 226 14 132 476 79 440 2.51e-31 126
MS.gene050655.t1 AT5G43100 26.829 369 223 14 131 476 73 417 1.15e-30 124
MS.gene050655.t1 AT5G43100 26.829 369 223 14 131 476 73 417 1.18e-30 125
MS.gene050655.t1 AT2G23945 26.906 446 278 22 61 476 21 448 6.73e-30 122
MS.gene050655.t1 AT3G02740 26.714 423 257 18 88 476 36 439 1.44e-28 118
MS.gene050655.t1 AT4G33490 28.232 379 215 18 132 477 58 412 4.82e-28 116
MS.gene050655.t1 AT3G02740 26.542 373 226 15 134 476 10 364 2.55e-27 114
MS.gene050655.t1 AT2G36670 27.568 370 233 13 132 476 98 457 1.98e-26 112
MS.gene050655.t1 AT2G36670 27.446 368 232 13 134 476 105 462 3.22e-26 112
MS.gene050655.t1 AT2G36670 27.717 368 231 14 134 476 34 391 3.63e-26 110
MS.gene050655.t1 AT2G36670 27.717 368 231 14 134 476 34 391 3.63e-26 110
MS.gene050655.t1 AT4G12920 25.128 390 234 12 113 477 32 388 2.33e-24 105
MS.gene050655.t1 AT2G17760 28.378 370 214 19 134 476 104 449 3.31e-24 105
MS.gene050655.t1 AT1G05840 25.397 378 232 16 132 476 78 438 5.85e-24 105
MS.gene050655.t1 AT1G65240 25.600 375 229 16 132 476 72 426 2.49e-23 102
MS.gene050655.t1 AT3G51340 25.056 443 272 19 69 476 30 447 6.44e-23 102
MS.gene050655.t1 AT3G50050 25.381 394 237 14 109 476 74 436 7.16e-23 102
MS.gene050655.t1 AT4G33490 28.613 346 193 17 132 447 55 376 1.22e-22 100
MS.gene050655.t1 AT3G51330 26.549 452 263 21 69 477 29 454 2.17e-21 97.1
MS.gene050655.t1 AT1G08210 28.108 370 230 15 132 476 82 440 2.83e-21 97.1
MS.gene050655.t1 AT1G08210 27.642 369 233 14 132 476 130 488 2.92e-21 97.1
MS.gene050655.t1 AT1G08210 27.642 369 233 14 132 476 116 474 2.96e-21 97.1
MS.gene050655.t1 AT3G25700 35.260 173 92 7 104 257 48 219 3.02e-21 95.1
MS.gene050655.t1 AT3G25700 35.821 134 80 4 348 476 215 347 3.87e-14 73.9
MS.gene050655.t1 AT3G51330 26.608 451 262 21 69 476 29 453 3.49e-21 97.1
MS.gene050655.t1 AT3G51350 25.272 368 233 13 134 476 102 452 3.71e-20 93.6
MS.gene050655.t1 AT3G51340 25.648 386 231 16 69 421 30 392 6.28e-20 92.0
MS.gene050655.t1 AT3G51340 24.503 453 274 20 69 476 30 459 1.60e-19 91.7
MS.gene050655.t1 AT3G51340 25.824 364 216 15 69 399 30 372 1.34e-18 87.8
MS.gene050655.t1 AT3G51330 26.995 426 242 21 69 451 29 428 2.30e-18 87.8
MS.gene050655.t1 AT3G42550 25.691 362 206 14 131 476 75 389 5.43e-17 83.6
MS.gene050655.t1 AT1G08210 27.711 332 207 13 132 440 82 403 6.51e-17 83.6
MS.gene050655.t1 AT3G51360 25.806 341 195 15 68 379 31 342 1.82e-13 72.0
MS.gene050655.t1 AT1G03220 24.041 391 235 18 129 472 39 414 2.34e-11 66.2
MS.gene050655.t1 AT5G48430 25.392 319 202 11 187 472 74 389 9.27e-11 63.9

Find 141 sgRNAs with CRISPR-Local

Find 159 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGGAGAGTGATTCTTCTTT+TGG 0.170893 7.3:-879310 None:intergenic
CGCGTGGCGCGTGTGGCTTT+AGG 0.227012 7.3:+879826 MS.gene050655:CDS
TATTCAGCAGCAAGGGTTTC+GGG 0.242630 7.3:+880476 MS.gene050655:CDS
GATAAAGATTCTTCTGATTC+TGG 0.246841 7.3:-879268 None:intergenic
GTTGGTGCTGCTGGTTTATT+AGG 0.281772 7.3:+879877 MS.gene050655:CDS
CACGCGCCACGCGCGTCTTT+CGG 0.291329 7.3:-879816 None:intergenic
TGAAGCCAGTAGCGGATCTA+TGG 0.300042 7.3:-879456 None:intergenic
CTGCTTGCGAATAACATTTC+CGG 0.301592 7.3:-879615 None:intergenic
TTCTATTACGTTGGACTTCT+CGG 0.303284 7.3:+880081 MS.gene050655:CDS
GCGTGGCGCGTGTGGCTTTA+GGG 0.318817 7.3:+879827 MS.gene050655:CDS
GATACTTGCTTTGATTTATC+TGG 0.322152 7.3:+880300 MS.gene050655:CDS
TTGCACTGAGAGATGCATTT+AGG 0.324139 7.3:+880232 MS.gene050655:CDS
GGCGGAGTTATCATTGATTC+AGG 0.331058 7.3:+880174 MS.gene050655:CDS
AGGAGCACCGCATGGGATTC+CGG 0.333198 7.3:-879674 None:intergenic
TGACTCTGGCAGCATCTCTT+TGG 0.333372 7.3:-879399 None:intergenic
ATATTCAGCAGCAAGGGTTT+CGG 0.334919 7.3:+880475 MS.gene050655:CDS
TAATCTCATTCACACCCTTT+TGG 0.336138 7.3:-880537 None:intergenic
GATTGAACCGGCGACCGGTT+TGG 0.338038 7.3:-879930 None:intergenic
ACCCTTCTACAACACTTTCA+TGG 0.345759 7.3:+879245 MS.gene050655:CDS
TAATAGAAAGTATCGAGTTT+AGG 0.348580 7.3:-880066 None:intergenic
GGCACAGAATTACTTGATTC+CGG 0.349446 7.3:+880386 MS.gene050655:CDS
GGCGATGGGTCTTTCACTTT+CGG 0.355522 7.3:+879766 MS.gene050655:CDS
AATGATAACTCCGCCGTTTC+CGG 0.356163 7.3:-880166 None:intergenic
GGCCATGAAAGTGTTGTAGA+AGG 0.364631 7.3:-879247 None:intergenic
CATGCGGTGCTCCTCTTTGC+CGG 0.374955 7.3:+879683 MS.gene050655:CDS
TTGAGAAAGTCCGGAGACTA+TGG 0.378424 7.3:-879485 None:intergenic
CTCGATACTTTCTATTACGT+TGG 0.395207 7.3:+880072 MS.gene050655:CDS
CGTAGGAACGTGACTTTGTT+GGG 0.396292 7.3:-879651 None:intergenic
AGAAGGAGATGGCTAATAAC+AGG 0.397096 7.3:-879153 None:intergenic
ATCTTGCGAGCTCGCGGGTC+GGG 0.397716 7.3:+880508 MS.gene050655:CDS
TAGCCACACCACGTCACTTC+CGG 0.407176 7.3:-879578 None:intergenic
AGTTTGAGTTTGTGTGTTAG+TGG 0.410528 7.3:-879200 None:intergenic
AGGTGCTGATGTGTCCCTTC+CGG 0.412328 7.3:+880365 MS.gene050655:CDS
AAGAGAATTTCTGATTGAAC+CGG 0.429358 7.3:-879942 None:intergenic
ATGTTATTCGCAAGCAGATC+CGG 0.430664 7.3:+879621 MS.gene050655:CDS
ATGAGTGGTTTGTCCATCAT+TGG 0.431680 7.3:+880450 MS.gene050655:CDS
GCTGCTGGTTTATTAGGTCT+TGG 0.436699 7.3:+879883 MS.gene050655:CDS
CGGGTCGGGTTTGCACCAAA+AGG 0.439668 7.3:+880522 MS.gene050655:CDS
TATTTCACTCGCATCGGCGT+TGG 0.442972 7.3:+879520 MS.gene050655:CDS
GAGGCGGAGACGCCACGAAC+TGG 0.443110 7.3:-880123 None:intergenic
TGTCAGTATCAAGTTTCTTA+CGG 0.448845 7.3:+879745 MS.gene050655:CDS
TGTAAGCAGGTCGAGTCAAT+CGG 0.453067 7.3:-880209 None:intergenic
GAAATTCTCTTATTGTCTTG+TGG 0.459018 7.3:+879954 MS.gene050655:CDS
CTGCTGAATATTACCAATGA+TGG 0.459225 7.3:-880463 None:intergenic
GCGTAGGAACGTGACTTTGT+TGG 0.461415 7.3:-879652 None:intergenic
TGGGTCTTCGGATTCGGGTA+TGG 0.461666 7.3:-879290 None:intergenic
TTCCGGTCCAAACCGGTCGC+CGG 0.464037 7.3:+879923 MS.gene050655:CDS
TGCCGGCGACTCGACACTGC+TGG 0.466483 7.3:+879700 MS.gene050655:CDS
TCTATTACGTTGGACTTCTC+GGG 0.468916 7.3:+880082 MS.gene050655:CDS
TCTCTTATTGTCTTGTGGAC+CGG 0.472788 7.3:+879959 MS.gene050655:CDS
AACCGGCGACCGGTTTGGAC+CGG 0.474663 7.3:-879925 None:intergenic
AAACTCGACACCGCCGGAAA+CGG 0.478325 7.3:+880153 MS.gene050655:CDS
AGTTTCTGCTTTGCTTTCGC+CGG 0.481212 7.3:+880423 MS.gene050655:CDS
TAATGAGAGTGTGAAGGAGA+AGG 0.487577 7.3:-879170 None:intergenic
GGACAAACCACTCATCGTTC+CGG 0.488760 7.3:-880442 None:intergenic
TTTCTGATTGAACCGGCGAC+CGG 0.493839 7.3:-879935 None:intergenic
GCCGCTGCCTTGAGAAAGTC+CGG 0.495381 7.3:-879494 None:intergenic
GAAGCCAGTAGCGGATCTAT+GGG 0.498743 7.3:-879455 None:intergenic
GTCGGTGGTGCTCCAGTTCG+TGG 0.500304 7.3:+880111 MS.gene050655:CDS
ATCAAGTTTCTTACGGCGAT+GGG 0.503051 7.3:+879752 MS.gene050655:CDS
GAAAGTGTTGTAGAAGGGTT+GGG 0.503412 7.3:-879241 None:intergenic
TCTTTCTCTCCAACAATGGA+AGG 0.507668 7.3:+879106 None:intergenic
TGAGATGGAAGAGTTGTTGT+GGG 0.508451 7.3:-879372 None:intergenic
TGAAAGTGTTGTAGAAGGGT+TGG 0.509537 7.3:-879242 None:intergenic
AAAGACGCGCGTGGCGCGTG+TGG 0.510956 7.3:+879819 MS.gene050655:CDS
TATCAAGTTTCTTACGGCGA+TGG 0.511342 7.3:+879751 MS.gene050655:CDS
CATCTCTTTGGAGTCTGAGA+TGG 0.515518 7.3:-879387 None:intergenic
AACCAGCAGTGTCGAGTCGC+CGG 0.516796 7.3:-879702 None:intergenic
CGTCCCCATAGATCCGCTAC+TGG 0.516821 7.3:+879451 MS.gene050655:CDS
CTGAGAGATGCATTTAGGCT+TGG 0.527744 7.3:+880237 MS.gene050655:CDS
TTTGAGAAGTGGAGTGAACC+GGG 0.528011 7.3:-880040 None:intergenic
ATACTGACAAACCTTGCTCT+TGG 0.528974 7.3:-879731 None:intergenic
CTCTTCAAACTCGACACCGC+CGG 0.530466 7.3:+880147 MS.gene050655:CDS
TGGTGCTACGCATCTGAAGA+AGG 0.532453 7.3:+880257 MS.gene050655:CDS
TGGCTAATAACAGGAAGAGA+AGG 0.533278 7.3:-879144 None:intergenic
GAGTGTGAAGGAGAAGGAGA+TGG 0.533697 7.3:-879164 None:intergenic
TTCAGCAGCTCCATAGTCTC+CGG 0.534475 7.3:+879475 MS.gene050655:CDS
GCTTTCGCCGGAACGATGAG+TGG 0.540100 7.3:+880435 MS.gene050655:CDS
GGCAAAGAGGAGCACCGCAT+GGG 0.541095 7.3:-879681 None:intergenic
TCTCTCAGTGCAATGTAAGC+AGG 0.541916 7.3:-880222 None:intergenic
GCGCGTGTGGCTTTAGGGTG+TGG 0.542668 7.3:+879832 MS.gene050655:CDS
CTCGACACCGCCGGAAACGG+CGG 0.545168 7.3:+880156 MS.gene050655:CDS
GATCTTGCGAGCTCGCGGGT+CGG 0.545739 7.3:+880507 MS.gene050655:CDS
CGGCTGTTTCTCGAACCGCC+CGG 0.547042 7.3:+880022 MS.gene050655:CDS
CTGAGATGGAAGAGTTGTTG+TGG 0.551222 7.3:-879373 None:intergenic
CGGCAAAGAGGAGCACCGCA+TGG 0.553154 7.3:-879682 None:intergenic
ACCATGAAAACATACCTAGC+TGG 0.553972 7.3:-879547 None:intergenic
ATCTGGTCTGACGGAAGTGA+AGG 0.555136 7.3:+880317 MS.gene050655:CDS
GTAAGCAGGTCGAGTCAATC+GGG 0.555188 7.3:-880208 None:intergenic
TGTTGCGAAGGATTTGACTC+TGG 0.555494 7.3:-879413 None:intergenic
TGCGAATAACATTTCCGGCA+TGG 0.557017 7.3:-879610 None:intergenic
CTTTGATTTATCTGGTCTGA+CGG 0.557950 7.3:+880308 MS.gene050655:CDS
GGCTACAATGTGCGCCATGC+CGG 0.558061 7.3:+879596 MS.gene050655:CDS
GGGTCGGGTTTGCACCAAAA+GGG 0.558186 7.3:+880523 MS.gene050655:CDS
TTGGTAATATTCAGCAGCAA+GGG 0.558689 7.3:+880469 MS.gene050655:CDS
TTGAGTTTGTGTGTTAGTGG+TGG 0.574851 7.3:-879197 None:intergenic
GGAATCAAGTAATTCTGTGC+CGG 0.577242 7.3:-880384 None:intergenic
ATTGGTAATATTCAGCAGCA+AGG 0.580766 7.3:+880468 MS.gene050655:CDS
GGACTTCTCGGGATCAGTGT+CGG 0.581085 7.3:+880093 MS.gene050655:CDS
GTGTCGAGTCGCCGGCAAAG+AGG 0.582989 7.3:-879694 None:intergenic
TCGGAACGTGAGTGTTTCAG+TGG 0.583381 7.3:-879797 None:intergenic
GGTTTATTAGGTCTTGGTCG+TGG 0.585085 7.3:+879889 MS.gene050655:CDS
GGCGAATATTTCACTCGCAT+CGG 0.585714 7.3:+879514 MS.gene050655:CDS
ACCGCATGGGATTCCGGCGT+AGG 0.586025 7.3:-879668 None:intergenic
TTATGATCTTGCGAGCTCGC+GGG 0.587097 7.3:+880503 MS.gene050655:CDS
TTTGTTGAGAGCTGTTGCGA+AGG 0.589319 7.3:-879425 None:intergenic
TCAAGTAATTCTGTGCCGGA+AGG 0.590991 7.3:-880380 None:intergenic
ATAGTCTCCGGACTTTCTCA+AGG 0.594667 7.3:+879487 MS.gene050655:CDS
CTTTCTCTCCAACAATGGAA+GGG 0.596519 7.3:+879107 None:intergenic
TGAAAATGAAGCACTAATGT+CGG 0.602965 7.3:-880342 None:intergenic
GTTATGATCTTGCGAGCTCG+CGG 0.603166 7.3:+880502 MS.gene050655:CDS
GAGATGGAAGAGTTGTTGTG+GGG 0.607914 7.3:-879371 None:intergenic
ACAAAGTCACGTTCCTACGC+CGG 0.611027 7.3:+879655 MS.gene050655:CDS
AAACTCCCACTGTTGTCCAC+CGG 0.611488 7.3:-880405 None:intergenic
TCGGCGTTGGAACTCCAGCT+AGG 0.613832 7.3:+879533 MS.gene050655:CDS
TGGTTGCAACACCAAGAGCA+AGG 0.613988 7.3:+879720 MS.gene050655:CDS
GGCTAATAACAGGAAGAGAA+GGG 0.614090 7.3:-879143 None:intergenic
TCCGGACTTTCTCAAGGCAG+CGG 0.615778 7.3:+879493 MS.gene050655:CDS
GATAACTCCGCCGTTTCCGG+CGG 0.625472 7.3:-880163 None:intergenic
TTGATTCCGGTGGACAACAG+TGG 0.625730 7.3:+880399 MS.gene050655:CDS
TACGCATCTGAAGAAGGCGC+CGG 0.628413 7.3:+880263 MS.gene050655:CDS
ACACCGGAAGTGACGTGGTG+TGG 0.630163 7.3:+879575 MS.gene050655:CDS
CTTCTCGGGATCAGTGTCGG+TGG 0.631380 7.3:+880096 MS.gene050655:CDS
GTCTATGTGGTGTAGCTGAA+GGG 0.633304 7.3:-879329 None:intergenic
TGATTCCGGTGGACAACAGT+GGG 0.634457 7.3:+880400 MS.gene050655:CDS
GTATCGAACAACGAAAACTC+CGG 0.636421 7.3:-880282 None:intergenic
CAAGTAATTCTGTGCCGGAA+GGG 0.643698 7.3:-880379 None:intergenic
CACGTTCCGAAAGACGCGCG+TGG 0.647276 7.3:+879810 MS.gene050655:CDS
TGTCTATGTGGTGTAGCTGA+AGG 0.647590 7.3:-879330 None:intergenic
TCTCGACACCGGAAGTGACG+TGG 0.648988 7.3:+879570 MS.gene050655:CDS
GCCATGAAAGTGTTGTAGAA+GGG 0.671272 7.3:-879246 None:intergenic
GGAGCTGCTGAAGCCAGTAG+CGG 0.671965 7.3:-879464 None:intergenic
ACAGAATTACTTGATTCCGG+TGG 0.679406 7.3:+880389 MS.gene050655:CDS
GGTGTCGAGTTTGAAGAGCG+AGG 0.684854 7.3:-880142 None:intergenic
CGGAGGAGAGAGTGTCTATG+TGG 0.693842 7.3:-879342 None:intergenic
TCCTACGCCGGAATCCCATG+CGG 0.708485 7.3:+879667 MS.gene050655:CDS
GGTTGTTAATGAGAGTGTGA+AGG 0.708906 7.3:-879176 None:intergenic
AAGCCAGTAGCGGATCTATG+GGG 0.720794 7.3:-879454 None:intergenic
GGGTGTGGACATGATAACGA+AGG 0.721683 7.3:+879847 MS.gene050655:CDS
GTCGAGTTTGAAGAGCGAGG+CGG 0.728421 7.3:-880139 None:intergenic
GAGAAGTGGAGTGAACCGGG+CGG 0.786995 7.3:-880037 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATAGAAAGTATCGAGTTT+AGG - chr7.3:880069-880088 None:intergenic 25.0%
AAGAGAATTTCTGATTGAAC+CGG - chr7.3:879945-879964 None:intergenic 30.0%
GAAATTCTCTTATTGTCTTG+TGG + chr7.3:879954-879973 MS.gene050655:CDS 30.0%
GATAAAGATTCTTCTGATTC+TGG - chr7.3:879271-879290 None:intergenic 30.0%
TGTCAGTATCAAGTTTCTTA+CGG + chr7.3:879745-879764 MS.gene050655:CDS 30.0%
! ACATTAGTGCTTCATTTTCA+AGG + chr7.3:880345-880364 MS.gene050655:CDS 30.0%
! GATACTTGCTTTGATTTATC+TGG + chr7.3:880300-880319 MS.gene050655:CDS 30.0%
! TGAAAATGAAGCACTAATGT+CGG - chr7.3:880345-880364 None:intergenic 30.0%
!! AGTTTAGGATTTTTGAGAAG+TGG - chr7.3:880054-880073 None:intergenic 30.0%
CTCGATACTTTCTATTACGT+TGG + chr7.3:880072-880091 MS.gene050655:CDS 35.0%
CTGCTGAATATTACCAATGA+TGG - chr7.3:880466-880485 None:intergenic 35.0%
TTCTATTACGTTGGACTTCT+CGG + chr7.3:880081-880100 MS.gene050655:CDS 35.0%
! AGTTTGAGTTTGTGTGTTAG+TGG - chr7.3:879203-879222 None:intergenic 35.0%
! ATTGGTAATATTCAGCAGCA+AGG + chr7.3:880468-880487 MS.gene050655:CDS 35.0%
! CTTTGATTTATCTGGTCTGA+CGG + chr7.3:880308-880327 MS.gene050655:CDS 35.0%
! TCGTGGTAGATTATCTTTTC+CGG + chr7.3:879906-879925 MS.gene050655:CDS 35.0%
! TTGGTAATATTCAGCAGCAA+GGG + chr7.3:880469-880488 MS.gene050655:CDS 35.0%
!! TGATTCTTCTTTTGGGTCTT+CGG - chr7.3:879305-879324 None:intergenic 35.0%
ACAGAATTACTTGATTCCGG+TGG + chr7.3:880389-880408 MS.gene050655:CDS 40.0%
ACCATGAAAACATACCTAGC+TGG - chr7.3:879550-879569 None:intergenic 40.0%
ACCCTTCTACAACACTTTCA+TGG + chr7.3:879245-879264 MS.gene050655:CDS 40.0%
AGAAGGAGATGGCTAATAAC+AGG - chr7.3:879156-879175 None:intergenic 40.0%
ATACTGACAAACCTTGCTCT+TGG - chr7.3:879734-879753 None:intergenic 40.0%
ATATTCAGCAGCAAGGGTTT+CGG + chr7.3:880475-880494 MS.gene050655:CDS 40.0%
ATCAAGTTTCTTACGGCGAT+GGG + chr7.3:879752-879771 MS.gene050655:CDS 40.0%
ATGTTATTCGCAAGCAGATC+CGG + chr7.3:879621-879640 MS.gene050655:CDS 40.0%
CTGCTTGCGAATAACATTTC+CGG - chr7.3:879618-879637 None:intergenic 40.0%
GACTTTGTTGGGTCAAAAAC+CGG - chr7.3:879643-879662 None:intergenic 40.0%
GGAATCAAGTAATTCTGTGC+CGG - chr7.3:880387-880406 None:intergenic 40.0%
GGCACAGAATTACTTGATTC+CGG + chr7.3:880386-880405 MS.gene050655:CDS 40.0%
GGCTAATAACAGGAAGAGAA+GGG - chr7.3:879146-879165 None:intergenic 40.0%
GTATCGAACAACGAAAACTC+CGG - chr7.3:880285-880304 None:intergenic 40.0%
TATCAAGTTTCTTACGGCGA+TGG + chr7.3:879751-879770 MS.gene050655:CDS 40.0%
TCACCAAAAACAACGGAAGA+CGG - chr7.3:880000-880019 None:intergenic 40.0%
TCTATTACGTTGGACTTCTC+GGG + chr7.3:880082-880101 MS.gene050655:CDS 40.0%
TCTCTTATTGTCTTGTGGAC+CGG + chr7.3:879959-879978 MS.gene050655:CDS 40.0%
TGAGATGGAAGAGTTGTTGT+GGG - chr7.3:879375-879394 None:intergenic 40.0%
TGGCTAATAACAGGAAGAGA+AGG - chr7.3:879147-879166 None:intergenic 40.0%
TTGAGTTTGTGTGTTAGTGG+TGG - chr7.3:879200-879219 None:intergenic 40.0%
TTGCACTGAGAGATGCATTT+AGG + chr7.3:880232-880251 MS.gene050655:CDS 40.0%
! AGGGAGAGTGATTCTTCTTT+TGG - chr7.3:879313-879332 None:intergenic 40.0%
! ATGAGTGGTTTGTCCATCAT+TGG + chr7.3:880450-880469 MS.gene050655:CDS 40.0%
! GATAACGAAGGTCTTTTCGT+TGG + chr7.3:879859-879878 MS.gene050655:CDS 40.0%
! GGGAGAGTGATTCTTCTTTT+GGG - chr7.3:879312-879331 None:intergenic 40.0%
! GGTTGTTAATGAGAGTGTGA+AGG - chr7.3:879179-879198 None:intergenic 40.0%
! TAATGAGAGTGTGAAGGAGA+AGG - chr7.3:879173-879192 None:intergenic 40.0%
! TCCAGCTAGGTATGTTTTCA+TGG + chr7.3:879546-879565 MS.gene050655:CDS 40.0%
! TTATCTTTTCCGGTCCAAAC+CGG + chr7.3:879916-879935 MS.gene050655:CDS 40.0%
!! AAACCGTCTTCCGTTGTTTT+TGG + chr7.3:879994-880013 MS.gene050655:CDS 40.0%
!! GAAAGTGTTGTAGAAGGGTT+GGG - chr7.3:879244-879263 None:intergenic 40.0%
!! GCCATGAAAGTGTTGTAGAA+GGG - chr7.3:879249-879268 None:intergenic 40.0%
!! TGAAAGTGTTGTAGAAGGGT+TGG - chr7.3:879245-879264 None:intergenic 40.0%
!! TTCTTTTGGGTCTTCGGATT+CGG - chr7.3:879299-879318 None:intergenic 40.0%
!! TTTTGAGAAGTGGAGTGAAC+CGG - chr7.3:880044-880063 None:intergenic 40.0%
!!! TTCCGTTGTTTTTGGTGACT+CGG + chr7.3:880002-880021 MS.gene050655:CDS 40.0%
AATGATAACTCCGCCGTTTC+CGG - chr7.3:880169-880188 None:intergenic 45.0%
AGCCGAGTCACCAAAAACAA+CGG - chr7.3:880007-880026 None:intergenic 45.0%
AGTTTCTGCTTTGCTTTCGC+CGG + chr7.3:880423-880442 MS.gene050655:CDS 45.0%
ATAGTCTCCGGACTTTCTCA+AGG + chr7.3:879487-879506 MS.gene050655:CDS 45.0%
CAAGTAATTCTGTGCCGGAA+GGG - chr7.3:880382-880401 None:intergenic 45.0%
CGTAGGAACGTGACTTTGTT+GGG - chr7.3:879654-879673 None:intergenic 45.0%
CTGAGAGATGCATTTAGGCT+TGG + chr7.3:880237-880256 MS.gene050655:CDS 45.0%
CTGAGATGGAAGAGTTGTTG+TGG - chr7.3:879376-879395 None:intergenic 45.0%
GAGATGGAAGAGTTGTTGTG+GGG - chr7.3:879374-879393 None:intergenic 45.0%
GGCGAATATTTCACTCGCAT+CGG + chr7.3:879514-879533 MS.gene050655:CDS 45.0%
GGTTTATTAGGTCTTGGTCG+TGG + chr7.3:879889-879908 MS.gene050655:CDS 45.0%
GTCTATGTGGTGTAGCTGAA+GGG - chr7.3:879332-879351 None:intergenic 45.0%
TATTCAGCAGCAAGGGTTTC+GGG + chr7.3:880476-880495 MS.gene050655:CDS 45.0%
TCAAGTAATTCTGTGCCGGA+AGG - chr7.3:880383-880402 None:intergenic 45.0%
TCTCTCAGTGCAATGTAAGC+AGG - chr7.3:880225-880244 None:intergenic 45.0%
TGCGAATAACATTTCCGGCA+TGG - chr7.3:879613-879632 None:intergenic 45.0%
TGTAAGCAGGTCGAGTCAAT+CGG - chr7.3:880212-880231 None:intergenic 45.0%
TGTCTATGTGGTGTAGCTGA+AGG - chr7.3:879333-879352 None:intergenic 45.0%
TGTTGCGAAGGATTTGACTC+TGG - chr7.3:879416-879435 None:intergenic 45.0%
TTGAGAAAGTCCGGAGACTA+TGG - chr7.3:879488-879507 None:intergenic 45.0%
TTTGAGAAGTGGAGTGAACC+GGG - chr7.3:880043-880062 None:intergenic 45.0%
TTTGTTGAGAGCTGTTGCGA+AGG - chr7.3:879428-879447 None:intergenic 45.0%
! GTTTTCATGGTTCTCGACAC+CGG + chr7.3:879559-879578 MS.gene050655:CDS 45.0%
!! ACGGTTTTGATGTAGCAGAC+CGG - chr7.3:879981-880000 None:intergenic 45.0%
!! CATCTCTTTGGAGTCTGAGA+TGG - chr7.3:879390-879409 None:intergenic 45.0%
!! GAGTTGTTGTGGGGTTTTGT+CGG - chr7.3:879365-879384 None:intergenic 45.0%
!! GCTGCTGGTTTATTAGGTCT+TGG + chr7.3:879883-879902 MS.gene050655:CDS 45.0%
!! GGCCATGAAAGTGTTGTAGA+AGG - chr7.3:879250-879269 None:intergenic 45.0%
!! GGCGGAGTTATCATTGATTC+AGG + chr7.3:880174-880193 MS.gene050655:CDS 45.0%
!! GTTGGTGCTGCTGGTTTATT+AGG + chr7.3:879877-879896 MS.gene050655:CDS 45.0%
!! TCTTTTGGGTCTTCGGATTC+GGG - chr7.3:879298-879317 None:intergenic 45.0%
AAACTCCCACTGTTGTCCAC+CGG - chr7.3:880408-880427 None:intergenic 50.0%
ACAAAGTCACGTTCCTACGC+CGG + chr7.3:879655-879674 MS.gene050655:CDS 50.0%
ATCTGGTCTGACGGAAGTGA+AGG + chr7.3:880317-880336 MS.gene050655:CDS 50.0%
GAGTGTGAAGGAGAAGGAGA+TGG - chr7.3:879167-879186 None:intergenic 50.0%
GCGTAGGAACGTGACTTTGT+TGG - chr7.3:879655-879674 None:intergenic 50.0%
GGACAAACCACTCATCGTTC+CGG - chr7.3:880445-880464 None:intergenic 50.0%
GGCGATGGGTCTTTCACTTT+CGG + chr7.3:879766-879785 MS.gene050655:CDS 50.0%
GTAAGCAGGTCGAGTCAATC+GGG - chr7.3:880211-880230 None:intergenic 50.0%
GTTATGATCTTGCGAGCTCG+CGG + chr7.3:880502-880521 MS.gene050655:CDS 50.0%
TCGGAACGTGAGTGTTTCAG+TGG - chr7.3:879800-879819 None:intergenic 50.0%
TGACTCTGGCAGCATCTCTT+TGG - chr7.3:879402-879421 None:intergenic 50.0%
TGATTCCGGTGGACAACAGT+GGG + chr7.3:880400-880419 MS.gene050655:CDS 50.0%
TGGTTGCAACACCAAGAGCA+AGG + chr7.3:879720-879739 MS.gene050655:CDS 50.0%
TTATGATCTTGCGAGCTCGC+GGG + chr7.3:880503-880522 MS.gene050655:CDS 50.0%
TTCAGCAGCTCCATAGTCTC+CGG + chr7.3:879475-879494 MS.gene050655:CDS 50.0%
TTGATTCCGGTGGACAACAG+TGG + chr7.3:880399-880418 MS.gene050655:CDS 50.0%
TTTCTGATTGAACCGGCGAC+CGG - chr7.3:879938-879957 None:intergenic 50.0%
! GGGTGTGGACATGATAACGA+AGG + chr7.3:879847-879866 MS.gene050655:CDS 50.0%
! TATTTCACTCGCATCGGCGT+TGG + chr7.3:879520-879539 MS.gene050655:CDS 50.0%
!! AAGCCAGTAGCGGATCTATG+GGG - chr7.3:879457-879476 None:intergenic 50.0%
!! GAAGCCAGTAGCGGATCTAT+GGG - chr7.3:879458-879477 None:intergenic 50.0%
!! TGAAGCCAGTAGCGGATCTA+TGG - chr7.3:879459-879478 None:intergenic 50.0%
!! TGGTGCTACGCATCTGAAGA+AGG + chr7.3:880257-880276 MS.gene050655:CDS 50.0%
!! TTGTTGTGGGGTTTTGTCGG+AGG - chr7.3:879362-879381 None:intergenic 50.0%
AAACTCGACACCGCCGGAAA+CGG + chr7.3:880153-880172 MS.gene050655:CDS 55.0%
CTCTTCAAACTCGACACCGC+CGG + chr7.3:880147-880166 MS.gene050655:CDS 55.0%
GGACTTCTCGGGATCAGTGT+CGG + chr7.3:880093-880112 MS.gene050655:CDS 55.0%
GGGTCGGGTTTGCACCAAAA+GGG + chr7.3:880523-880542 MS.gene050655:CDS 55.0%
GTCGAGTTTGAAGAGCGAGG+CGG - chr7.3:880142-880161 None:intergenic 55.0%
TAGCCACACCACGTCACTTC+CGG - chr7.3:879581-879600 None:intergenic 55.0%
TCCGGACTTTCTCAAGGCAG+CGG + chr7.3:879493-879512 MS.gene050655:CDS 55.0%
TGGGTCTTCGGATTCGGGTA+TGG - chr7.3:879293-879312 None:intergenic 55.0%
! GGTGTCGAGTTTGAAGAGCG+AGG - chr7.3:880145-880164 None:intergenic 55.0%
! TACGCATCTGAAGAAGGCGC+CGG + chr7.3:880263-880282 MS.gene050655:CDS 55.0%
!! AGGTGCTGATGTGTCCCTTC+CGG + chr7.3:880365-880384 MS.gene050655:CDS 55.0%
!! CGGAGGAGAGAGTGTCTATG+TGG - chr7.3:879345-879364 None:intergenic 55.0%
!!! GGTCTTTTCGTTGGTGCTGC+TGG + chr7.3:879868-879887 MS.gene050655:CDS 55.0%
ACACCGGAAGTGACGTGGTG+TGG + chr7.3:879575-879594 MS.gene050655:CDS 60.0%
CATGCGGTGCTCCTCTTTGC+CGG + chr7.3:879683-879702 MS.gene050655:CDS 60.0%
CGGGTCGGGTTTGCACCAAA+AGG + chr7.3:880522-880541 MS.gene050655:CDS 60.0%
CGTCCCCATAGATCCGCTAC+TGG + chr7.3:879451-879470 MS.gene050655:CDS 60.0%
GAGAAGTGGAGTGAACCGGG+CGG - chr7.3:880040-880059 None:intergenic 60.0%
GATAACTCCGCCGTTTCCGG+CGG - chr7.3:880166-880185 None:intergenic 60.0%
GATTGAACCGGCGACCGGTT+TGG - chr7.3:879933-879952 None:intergenic 60.0%
GCCGCTGCCTTGAGAAAGTC+CGG - chr7.3:879497-879516 None:intergenic 60.0%
GCTTTCGCCGGAACGATGAG+TGG + chr7.3:880435-880454 MS.gene050655:CDS 60.0%
GGAGCTGCTGAAGCCAGTAG+CGG - chr7.3:879467-879486 None:intergenic 60.0%
GGCTACAATGTGCGCCATGC+CGG + chr7.3:879596-879615 MS.gene050655:CDS 60.0%
TCCTACGCCGGAATCCCATG+CGG + chr7.3:879667-879686 MS.gene050655:CDS 60.0%
TCTCGACACCGGAAGTGACG+TGG + chr7.3:879570-879589 MS.gene050655:CDS 60.0%
! AACCAGCAGTGTCGAGTCGC+CGG - chr7.3:879705-879724 None:intergenic 60.0%
! CTTCTCGGGATCAGTGTCGG+TGG + chr7.3:880096-880115 MS.gene050655:CDS 60.0%
! TCGGCGTTGGAACTCCAGCT+AGG + chr7.3:879533-879552 MS.gene050655:CDS 60.0%
!! AGGAGCACCGCATGGGATTC+CGG - chr7.3:879677-879696 None:intergenic 60.0%
!! GGCAAAGAGGAGCACCGCAT+GGG - chr7.3:879684-879703 None:intergenic 60.0%
ACCGCATGGGATTCCGGCGT+AGG - chr7.3:879671-879690 None:intergenic 65.0%
ATCTTGCGAGCTCGCGGGTC+GGG + chr7.3:880508-880527 MS.gene050655:CDS 65.0%
CACGTTCCGAAAGACGCGCG+TGG + chr7.3:879810-879829 MS.gene050655:CDS 65.0%
GATCTTGCGAGCTCGCGGGT+CGG + chr7.3:880507-880526 MS.gene050655:CDS 65.0%
GTCGGTGGTGCTCCAGTTCG+TGG + chr7.3:880111-880130 MS.gene050655:CDS 65.0%
GTGTCGAGTCGCCGGCAAAG+AGG - chr7.3:879697-879716 None:intergenic 65.0%
TTCCGGTCCAAACCGGTCGC+CGG + chr7.3:879923-879942 MS.gene050655:CDS 65.0%
! GCGTGGCGCGTGTGGCTTTA+GGG + chr7.3:879827-879846 MS.gene050655:CDS 65.0%
!! AACCGGCGACCGGTTTGGAC+CGG - chr7.3:879928-879947 None:intergenic 65.0%
!! CGGCAAAGAGGAGCACCGCA+TGG - chr7.3:879685-879704 None:intergenic 65.0%
!! CGGCTGTTTCTCGAACCGCC+CGG + chr7.3:880022-880041 MS.gene050655:CDS 65.0%
!! GCGCGTGTGGCTTTAGGGTG+TGG + chr7.3:879832-879851 MS.gene050655:CDS 65.0%
AAAGACGCGCGTGGCGCGTG+TGG + chr7.3:879819-879838 MS.gene050655:CDS 70.0%
CACGCGCCACGCGCGTCTTT+CGG - chr7.3:879819-879838 None:intergenic 70.0%
CGCGTGGCGCGTGTGGCTTT+AGG + chr7.3:879826-879845 MS.gene050655:CDS 70.0%
CTCGACACCGCCGGAAACGG+CGG + chr7.3:880156-880175 MS.gene050655:CDS 70.0%
GAGGCGGAGACGCCACGAAC+TGG - chr7.3:880126-880145 None:intergenic 70.0%
TGCCGGCGACTCGACACTGC+TGG + chr7.3:879700-879719 MS.gene050655:CDS 70.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 879121 880554 879121 ID=MS.gene050655
chr7.3 mRNA 879121 880554 879121 ID=MS.gene050655.t1;Parent=MS.gene050655
chr7.3 exon 879121 880554 879121 ID=MS.gene050655.t1.exon1;Parent=MS.gene050655.t1
chr7.3 CDS 879121 880554 879121 ID=cds.MS.gene050655.t1;Parent=MS.gene050655.t1
Gene Sequence

>MS.gene050655

ATGGAAGGGAACAATAACAAAACCCTTCTCTTCCTGTTATTAGCCATCTCCTTCTCCTTCACACTCTCATTAACAACCACCACTAACACACAAACTCAAACTCTTTCTATTCGCTCTCTTCCCAACCCTTCTACAACACTTTCATGGCCAGAATCAGAAGAATCTTTATCCATACCCGAATCCGAAGACCCAAAAGAAGAATCACTCTCCCTTCAGCTACACCACATAGACACTCTCTCCTCCGACAAAACCCCACAACAACTCTTCCATCTCAGACTCCAAAGAGATGCTGCCAGAGTCAAATCCTTCGCAACAGCTCTCAACAAAACTCGTCCCCATAGATCCGCTACTGGCTTCAGCAGCTCCATAGTCTCCGGACTTTCTCAAGGCAGCGGCGAATATTTCACTCGCATCGGCGTTGGAACTCCAGCTAGGTATGTTTTCATGGTTCTCGACACCGGAAGTGACGTGGTGTGGCTACAATGTGCGCCATGCCGGAAATGTTATTCGCAAGCAGATCCGGTTTTTGACCCAACAAAGTCACGTTCCTACGCCGGAATCCCATGCGGTGCTCCTCTTTGCCGGCGACTCGACACTGCTGGTTGCAACACCAAGAGCAAGGTTTGTCAGTATCAAGTTTCTTACGGCGATGGGTCTTTCACTTTCGGTGATTTCTCCACTGAAACACTCACGTTCCGAAAGACGCGCGTGGCGCGTGTGGCTTTAGGGTGTGGACATGATAACGAAGGTCTTTTCGTTGGTGCTGCTGGTTTATTAGGTCTTGGTCGTGGTAGATTATCTTTTCCGGTCCAAACCGGTCGCCGGTTCAATCAGAAATTCTCTTATTGTCTTGTGGACCGGTCTGCTACATCAAAACCGTCTTCCGTTGTTTTTGGTGACTCGGCTGTTTCTCGAACCGCCCGGTTCACTCCACTTCTCAAAAATCCTAAACTCGATACTTTCTATTACGTTGGACTTCTCGGGATCAGTGTCGGTGGTGCTCCAGTTCGTGGCGTCTCCGCCTCGCTCTTCAAACTCGACACCGCCGGAAACGGCGGAGTTATCATTGATTCAGGAACTTCAGTAACCCGATTGACTCGACCTGCTTACATTGCACTGAGAGATGCATTTAGGCTTGGTGCTACGCATCTGAAGAAGGCGCCGGAGTTTTCGTTGTTCGATACTTGCTTTGATTTATCTGGTCTGACGGAAGTGAAGGTGCCGACATTAGTGCTTCATTTTCAAGGTGCTGATGTGTCCCTTCCGGCACAGAATTACTTGATTCCGGTGGACAACAGTGGGAGTTTCTGCTTTGCTTTCGCCGGAACGATGAGTGGTTTGTCCATCATTGGTAATATTCAGCAGCAAGGGTTTCGGGTCAGTTATGATCTTGCGAGCTCGCGGGTCGGGTTTGCACCAAAAGGGTGTGAATGA
Protein sequence

>MS.gene050655.t1

MEGNNNKTLLFLLLAISFSFTLSLTTTTNTQTQTLSIRSLPNPSTTLSWPESEESLSIPESEDPKEESLSLQLHHIDTLSSDKTPQQLFHLRLQRDAARVKSFATALNKTRPHRSATGFSSSIVSGLSQGSGEYFTRIGVGTPARYVFMVLDTGSDVVWLQCAPCRKCYSQADPVFDPTKSRSYAGIPCGAPLCRRLDTAGCNTKSKVCQYQVSYGDGSFTFGDFSTETLTFRKTRVARVALGCGHDNEGLFVGAAGLLGLGRGRLSFPVQTGRRFNQKFSYCLVDRSATSKPSSVVFGDSAVSRTARFTPLLKNPKLDTFYYVGLLGISVGGAPVRGVSASLFKLDTAGNGGVIIDSGTSVTRLTRPAYIALRDAFRLGATHLKKAPEFSLFDTCFDLSGLTEVKVPTLVLHFQGADVSLPAQNYLIPVDNSGSFCFAFAGTMSGLSIIGNIQQQGFRVSYDLASSRVGFAPKGCE