AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene22706

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene22706.t1 MTR_7g117430 95.885 486 14 4 1 481 1 485 0.0 935
MS.gene22706.t1 MTR_1g111350 57.073 410 164 6 72 480 69 467 8.56e-145 423
MS.gene22706.t1 MTR_1g115210 46.833 442 221 9 47 480 51 486 3.42e-126 376
MS.gene22706.t1 MTR_1g039270 46.462 424 217 6 64 480 49 469 1.57e-119 358
MS.gene22706.t1 MTR_6g085010 49.647 425 188 10 72 480 77 491 4.38e-114 345
MS.gene22706.t1 MTR_2g028190 37.471 435 241 13 69 481 27 452 1.80e-87 275
MS.gene22706.t1 MTR_8g103880 39.353 371 213 8 108 473 85 448 2.98e-84 267
MS.gene22706.t1 MTR_3g097150 38.889 414 233 10 75 480 45 446 1.18e-83 265
MS.gene22706.t1 MTR_3g053710 36.607 448 232 11 54 481 52 467 1.45e-77 250
MS.gene22706.t1 MTR_5g091130 36.966 468 241 14 65 480 88 553 5.17e-77 251
MS.gene22706.t1 MTR_4g007740 35.763 439 248 11 62 480 53 477 8.15e-76 246
MS.gene22706.t1 MTR_3g046300 39.075 389 201 9 120 481 80 459 2.20e-75 244
MS.gene22706.t1 MTR_5g080890 38.764 356 198 12 136 480 85 431 1.76e-67 223
MS.gene22706.t1 MTR_5g044770 35.748 428 232 17 71 480 26 428 5.35e-66 219
MS.gene22706.t1 MTR_5g080960 38.764 356 198 12 136 480 85 431 5.59e-66 219
MS.gene22706.t1 MTR_3g053980 40.274 365 194 9 129 481 134 486 1.12e-65 219
MS.gene22706.t1 MTR_8g038280 35.104 433 237 18 69 480 24 433 4.46e-64 214
MS.gene22706.t1 MTR_8g096990 34.286 420 246 15 73 480 28 429 5.52e-63 211
MS.gene22706.t1 MTR_0036s0070 36.723 354 197 12 136 480 89 424 4.46e-61 206
MS.gene22706.t1 MTR_2g059460 37.534 373 201 11 125 480 47 404 1.17e-60 204
MS.gene22706.t1 MTR_3g028120 35.014 357 208 13 138 480 90 436 3.74e-59 201
MS.gene22706.t1 MTR_0036s0050 36.164 365 193 13 136 480 89 433 4.05e-58 198
MS.gene22706.t1 MTR_5g038360 36.141 368 211 16 126 480 78 434 1.57e-57 197
MS.gene22706.t1 MTR_2g059490 36.695 357 207 10 137 480 58 408 1.71e-57 197
MS.gene22706.t1 MTR_6g090290 33.886 422 250 13 73 480 28 434 3.07e-57 196
MS.gene22706.t1 MTR_0024s0040 36.313 358 200 13 138 480 64 408 5.78e-57 194
MS.gene22706.t1 MTR_2g067830 32.512 406 225 16 97 480 26 404 2.14e-56 193
MS.gene22706.t1 MTR_0036s0110 32.488 434 250 15 70 480 27 440 8.95e-56 192
MS.gene22706.t1 MTR_5g008110 34.719 409 227 16 92 480 25 413 2.31e-55 190
MS.gene22706.t1 MTR_8g038250 32.861 423 232 15 73 480 28 413 2.17e-53 185
MS.gene22706.t1 MTR_3g014290 36.000 350 209 6 135 480 78 416 2.88e-53 185
MS.gene22706.t1 MTR_1g037630 36.000 350 209 6 135 480 90 428 4.77e-53 184
MS.gene22706.t1 MTR_8g038310 32.000 425 230 17 73 480 29 411 4.00e-52 182
MS.gene22706.t1 MTR_4g109760 36.657 341 189 14 153 480 70 396 7.10e-51 178
MS.gene22706.t1 MTR_5g008150 32.331 399 234 14 102 480 28 410 1.17e-50 178
MS.gene22706.t1 MTR_5g008070 32.947 431 249 14 65 480 19 424 1.88e-50 177
MS.gene22706.t1 MTR_2g105300 32.164 342 196 14 156 477 54 379 2.05e-49 174
MS.gene22706.t1 MTR_5g044570 31.655 417 233 18 77 480 32 409 4.26e-49 174
MS.gene22706.t1 MTR_8g039540 31.579 437 264 13 60 480 16 433 4.21e-48 171
MS.gene22706.t1 MTR_6g088760 31.845 336 197 11 128 444 79 401 1.61e-46 169
MS.gene22706.t1 MTR_3g100500 34.699 366 220 8 124 481 84 438 9.17e-46 165
MS.gene22706.t1 MTR_4g045857 37.872 235 134 5 113 335 32 266 8.24e-41 148
MS.gene22706.t1 MTR_7g105850 30.414 411 226 16 117 481 70 466 1.41e-40 152
MS.gene22706.t1 MTR_5g012490 30.657 411 214 19 131 480 69 469 6.22e-39 147
MS.gene22706.t1 MTR_3g068000 31.830 377 204 18 144 481 80 442 8.31e-39 147
MS.gene22706.t1 MTR_2g055840 29.650 371 222 13 138 480 14 373 2.31e-38 144
MS.gene22706.t1 MTR_4g100990 30.488 410 217 18 131 480 69 470 2.96e-38 145
MS.gene22706.t1 MTR_5g077850 30.833 360 216 15 144 480 88 437 4.22e-38 144
MS.gene22706.t1 MTR_3g065160 28.090 445 268 20 60 480 10 426 1.85e-37 142
MS.gene22706.t1 MTR_2g063110 29.040 427 236 18 112 481 93 509 2.59e-37 143
MS.gene22706.t1 MTR_1g060750 30.894 369 191 14 134 480 48 374 3.37e-37 140
MS.gene22706.t1 MTR_5g077920 32.692 364 206 16 144 480 75 426 6.99e-32 127
MS.gene22706.t1 MTR_7g062360 30.400 375 214 20 142 481 64 426 1.32e-30 123
MS.gene22706.t1 MTR_2g070430 29.288 379 223 15 135 479 85 452 2.21e-30 123
MS.gene22706.t1 MTR_7g102750 27.493 371 233 13 136 480 80 440 3.94e-30 123
MS.gene22706.t1 MTR_7g080230 27.506 389 224 16 129 480 63 430 6.17e-30 122
MS.gene22706.t1 MTR_5g008090 33.013 312 165 15 193 480 21 312 8.00e-29 116
MS.gene22706.t1 MTR_6g084710 27.461 386 230 18 128 480 182 550 1.86e-28 119
MS.gene22706.t1 MTR_5g016260 26.146 371 224 14 135 480 86 431 1.17e-27 116
MS.gene22706.t1 MTR_1g078240 26.371 383 238 14 129 480 61 430 1.27e-27 115
MS.gene22706.t1 MTR_5g016260 26.146 371 224 14 135 480 86 431 1.54e-27 116
MS.gene22706.t1 MTR_4g056420 27.628 409 242 16 110 480 44 436 2.20e-27 114
MS.gene22706.t1 MTR_1g061940 27.105 380 229 14 134 480 80 444 8.45e-27 113
MS.gene22706.t1 MTR_1g078240 26.371 383 237 15 129 480 61 429 1.28e-26 112
MS.gene22706.t1 MTR_2g084550 28.140 430 255 16 78 480 35 437 2.53e-26 112
MS.gene22706.t1 MTR_8g075090 26.613 372 221 16 138 481 113 460 4.01e-26 111
MS.gene22706.t1 MTR_3g096930 27.660 376 219 17 136 481 83 435 7.65e-26 110
MS.gene22706.t1 MTR_7g102750 27.457 346 215 13 136 455 80 415 1.18e-25 109
MS.gene22706.t1 MTR_7g021510 26.649 379 228 17 136 480 71 433 2.32e-25 108
MS.gene22706.t1 MTR_8g094590 26.492 419 249 19 98 481 31 425 3.31e-25 108
MS.gene22706.t1 MTR_8g075090 26.415 371 221 16 138 480 113 459 3.32e-25 108
MS.gene22706.t1 MTR_4g095270 26.613 372 221 16 135 480 78 423 1.47e-24 107
MS.gene22706.t1 MTR_4g095270 26.613 372 221 16 135 480 78 423 1.85e-24 107
MS.gene22706.t1 MTR_1g078240 28.049 328 198 13 129 431 61 375 2.78e-24 104
MS.gene22706.t1 MTR_5g022880 27.394 376 213 17 138 480 113 461 3.14e-24 105
MS.gene22706.t1 MTR_6g084710 28.571 266 158 11 128 377 182 431 2.76e-23 103
MS.gene22706.t1 MTR_8g094590 27.249 378 220 18 98 444 31 384 3.19e-22 99.0
MS.gene22706.t1 MTR_8g075090 27.742 310 177 13 138 422 113 400 9.67e-22 98.2
MS.gene22706.t1 MTR_4g023650 26.506 415 241 21 108 481 29 420 3.95e-21 95.9
MS.gene22706.t1 MTR_1g029810 26.667 375 226 17 136 481 56 410 9.20e-21 94.7
MS.gene22706.t1 MTR_1g029810 26.260 377 225 17 136 481 56 410 2.45e-20 93.6
MS.gene22706.t1 MTR_5g080330 27.874 348 207 15 153 481 1 323 2.80e-20 93.6
MS.gene22706.t1 MTR_3g087780 25.067 371 232 12 138 481 100 451 3.69e-20 93.6
MS.gene22706.t1 MTR_8g094590 27.852 298 174 12 98 377 31 305 7.85e-20 90.5
MS.gene22706.t1 MTR_5g061690 26.630 368 227 14 138 481 102 450 2.54e-19 91.3
MS.gene22706.t1 MTR_8g075010 26.146 371 224 16 138 480 101 449 9.35e-18 86.3
MS.gene22706.t1 MTR_1g072380 25.897 390 226 17 137 476 56 432 6.00e-17 83.6
MS.gene22706.t1 MTR_2g022320 26.042 384 224 16 138 476 37 405 1.28e-16 82.0
MS.gene22706.t1 MTR_7g080230 26.347 334 193 15 179 480 48 360 4.33e-16 80.5
MS.gene22706.t1 MTR_1g072450 25.323 387 229 19 135 476 44 415 5.67e-16 80.5
MS.gene22706.t1 MTR_2g022480 24.922 321 188 14 138 420 50 355 1.59e-14 75.9
MS.gene22706.t1 MTR_2g022430 25.765 392 217 19 138 476 40 410 1.95e-13 72.4
MS.gene22706.t1 MTR_5g061690 25.817 306 193 12 191 481 25 311 3.26e-13 71.6
MS.gene22706.t1 MTR_2g022380 25.714 385 225 17 138 476 40 409 7.90e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene22706.t1 AT1G01300 79.469 414 78 2 73 480 72 484 0.0 645
MS.gene22706.t1 AT3G61820 65.051 495 146 11 1 480 1 483 0.0 567
MS.gene22706.t1 AT3G18490 48.207 502 221 15 11 480 6 500 1.24e-130 388
MS.gene22706.t1 AT1G25510 48.387 465 215 9 33 480 27 483 5.76e-129 383
MS.gene22706.t1 AT3G20015 47.630 422 209 6 67 480 53 470 5.01e-119 357
MS.gene22706.t1 AT5G10770 39.206 403 225 9 88 480 81 473 2.29e-83 265
MS.gene22706.t1 AT2G03200 36.768 427 234 13 75 480 47 458 2.56e-79 254
MS.gene22706.t1 AT5G10760 39.589 389 217 11 97 480 89 464 1.13e-73 240
MS.gene22706.t1 AT3G25700 38.084 407 213 17 108 480 48 449 6.60e-71 232
MS.gene22706.t1 AT2G42980 35.828 441 230 14 87 480 90 524 2.02e-68 228
MS.gene22706.t1 AT5G33340 34.901 404 234 10 87 480 50 434 5.90e-68 224
MS.gene22706.t1 AT3G59080 39.474 380 202 11 125 480 157 532 6.50e-68 227
MS.gene22706.t1 AT1G79720 34.259 432 249 12 71 480 64 482 1.16e-65 219
MS.gene22706.t1 AT3G54400 34.286 420 252 10 67 480 23 424 2.76e-62 209
MS.gene22706.t1 AT2G35615 33.483 445 258 14 59 480 14 443 2.18e-59 202
MS.gene22706.t1 AT1G64830 32.779 421 243 14 80 480 28 428 3.24e-59 201
MS.gene22706.t1 AT1G09750 35.262 363 221 8 127 481 93 449 7.08e-59 201
MS.gene22706.t1 AT3G59080 37.766 376 178 11 125 480 157 496 2.96e-58 200
MS.gene22706.t1 AT1G31450 33.256 430 252 16 71 480 27 441 6.57e-57 195
MS.gene22706.t1 AT3G12700 32.054 443 261 15 60 480 36 460 1.28e-47 171
MS.gene22706.t1 AT2G28040 31.653 357 201 11 137 480 64 390 8.08e-45 162
MS.gene22706.t1 AT2G28040 31.653 357 201 11 137 480 55 381 9.23e-45 161
MS.gene22706.t1 AT5G07030 32.394 355 221 10 135 481 112 455 4.41e-43 158
MS.gene22706.t1 AT2G28010 30.791 354 207 12 138 480 65 391 6.02e-43 157
MS.gene22706.t1 AT2G39710 32.249 369 205 15 142 476 69 426 5.35e-42 155
MS.gene22706.t1 AT5G02190 34.043 376 193 22 147 481 82 443 1.23e-41 154
MS.gene22706.t1 AT4G30040 30.986 355 216 12 138 475 85 427 1.61e-41 154
MS.gene22706.t1 AT2G28030 31.356 354 205 12 138 480 61 387 5.73e-41 151
MS.gene22706.t1 AT4G30030 31.180 356 220 15 138 481 78 420 2.36e-40 150
MS.gene22706.t1 AT3G52500 30.804 448 249 19 85 480 29 467 1.91e-39 149
MS.gene22706.t1 AT1G66180 32.687 361 207 19 144 480 78 426 2.53e-39 147
MS.gene22706.t1 AT5G37540 32.020 406 230 20 106 481 50 439 3.62e-39 147
MS.gene22706.t1 AT2G28220 30.641 359 205 13 138 480 67 397 2.36e-38 144
MS.gene22706.t1 AT2G28225 30.362 359 206 13 138 480 67 397 1.47e-37 142
MS.gene22706.t1 AT5G45120 28.928 401 222 17 138 480 83 478 8.27e-36 139
MS.gene22706.t1 AT5G36260 29.223 373 221 17 136 480 76 433 7.34e-33 130
MS.gene22706.t1 AT4G16563 32.581 399 189 17 155 480 100 491 2.03e-31 127
MS.gene22706.t1 AT5G22850 29.301 372 226 14 136 480 79 440 2.86e-31 126
MS.gene22706.t1 AT5G43100 26.829 369 223 14 135 480 73 417 1.09e-30 125
MS.gene22706.t1 AT5G43100 26.829 369 223 14 135 480 73 417 1.10e-30 124
MS.gene22706.t1 AT2G23945 26.906 446 278 22 65 480 21 448 1.06e-29 121
MS.gene22706.t1 AT3G02740 26.714 423 257 18 92 480 36 439 2.13e-28 118
MS.gene22706.t1 AT4G33490 28.232 379 215 18 136 481 58 412 5.40e-28 115
MS.gene22706.t1 AT3G02740 26.542 373 226 15 138 480 10 364 4.02e-27 113
MS.gene22706.t1 AT2G36670 27.568 370 233 13 136 480 98 457 2.07e-26 112
MS.gene22706.t1 AT2G36670 27.446 368 232 13 138 480 105 462 4.09e-26 111
MS.gene22706.t1 AT2G36670 27.989 368 230 15 138 480 34 391 5.63e-26 110
MS.gene22706.t1 AT2G36670 27.989 368 230 15 138 480 34 391 5.63e-26 110
MS.gene22706.t1 AT4G12920 25.128 390 234 12 117 481 32 388 2.22e-24 105
MS.gene22706.t1 AT2G17760 28.378 370 214 19 138 480 104 449 3.38e-24 105
MS.gene22706.t1 AT1G05840 25.397 378 232 16 136 480 78 438 7.11e-24 104
MS.gene22706.t1 AT1G65240 25.600 375 229 16 136 480 72 426 3.16e-23 102
MS.gene22706.t1 AT3G51340 25.056 443 272 19 73 480 30 447 6.49e-23 102
MS.gene22706.t1 AT3G50050 25.381 394 237 14 113 480 74 436 8.99e-23 102
MS.gene22706.t1 AT4G33490 28.613 346 193 17 136 451 55 376 1.69e-22 99.8
MS.gene22706.t1 AT3G51330 26.549 452 263 21 73 481 29 454 2.36e-21 97.1
MS.gene22706.t1 AT3G51330 26.608 451 262 21 73 480 29 453 2.82e-21 97.1
MS.gene22706.t1 AT1G08210 27.642 369 233 14 136 480 130 488 3.10e-21 97.1
MS.gene22706.t1 AT1G08210 27.642 369 233 14 136 480 116 474 3.14e-21 97.1
MS.gene22706.t1 AT3G25700 35.260 173 92 7 108 261 48 219 3.44e-21 95.1
MS.gene22706.t1 AT3G25700 37.037 135 77 6 352 480 215 347 3.66e-14 74.3
MS.gene22706.t1 AT1G08210 28.108 370 230 15 136 480 82 440 3.54e-21 96.7
MS.gene22706.t1 AT3G51350 25.272 368 233 13 138 480 102 452 3.72e-20 93.6
MS.gene22706.t1 AT3G51340 25.648 386 231 16 73 425 30 392 7.47e-20 92.0
MS.gene22706.t1 AT3G51340 24.835 455 270 21 73 480 30 459 1.88e-19 91.7
MS.gene22706.t1 AT3G51340 25.824 364 216 15 73 403 30 372 1.44e-18 87.8
MS.gene22706.t1 AT3G51330 26.995 426 242 21 73 455 29 428 2.75e-18 87.8
MS.gene22706.t1 AT3G42550 25.691 362 206 14 135 480 75 389 6.72e-17 83.2
MS.gene22706.t1 AT1G08210 27.711 332 207 13 136 444 82 403 7.84e-17 83.6
MS.gene22706.t1 AT3G51360 25.806 341 195 15 72 383 31 342 2.06e-13 72.0
MS.gene22706.t1 AT1G03220 24.041 391 235 18 133 476 39 414 1.79e-11 66.6

Find 141 sgRNAs with CRISPR-Local

Find 159 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGGAGAGTGATTCTTCTTT+TGG 0.170893 7.4:-946830 None:intergenic
CGCGTGGCGCGTGTGGCTTT+AGG 0.227012 7.4:+947346 MS.gene22706:CDS
TATTCAGCAGCAAGGGTTTC+GGG 0.242630 7.4:+947996 MS.gene22706:CDS
GATAAAGATTCTTCTGATTC+TGG 0.246841 7.4:-946788 None:intergenic
GTTGGTGCTGCTGGTTTATT+AGG 0.281772 7.4:+947397 MS.gene22706:CDS
CACGCGCCACGCGCGTCTTT+CGG 0.291329 7.4:-947336 None:intergenic
TGAAGCCAGTAGCGGATCTA+TGG 0.300042 7.4:-946976 None:intergenic
CTGCTTGCGAATAACATTTC+CGG 0.301592 7.4:-947135 None:intergenic
TTCTATTACGTTGGACTTCT+CGG 0.303284 7.4:+947601 MS.gene22706:CDS
GCGTGGCGCGTGTGGCTTTA+GGG 0.318817 7.4:+947347 MS.gene22706:CDS
GATACTTGCTTTGATTTATC+TGG 0.322152 7.4:+947820 MS.gene22706:CDS
TTGCACTGAGAGATGCATTT+AGG 0.324139 7.4:+947752 MS.gene22706:CDS
GGCGGAGTTATCATTGATTC+AGG 0.331058 7.4:+947694 MS.gene22706:CDS
AGGAGCACCGCATGGGATTC+CGG 0.333198 7.4:-947194 None:intergenic
TGACTCTGGCAGCATCTCTT+TGG 0.333372 7.4:-946919 None:intergenic
ATATTCAGCAGCAAGGGTTT+CGG 0.334919 7.4:+947995 MS.gene22706:CDS
TAATCTCATTCACACCCTTT+TGG 0.336138 7.4:-948057 None:intergenic
GATTGAACCGGCGACCGGTT+TGG 0.338038 7.4:-947450 None:intergenic
ACCCTTCTACAACACTTTCA+TGG 0.345759 7.4:+946765 MS.gene22706:CDS
TAATAGAAAGTATCGAGTTT+AGG 0.348580 7.4:-947586 None:intergenic
GGCACAGAATTACTTGATTC+CGG 0.349446 7.4:+947906 MS.gene22706:CDS
GGCGATGGGTCTTTCACTTT+CGG 0.355522 7.4:+947286 MS.gene22706:CDS
AATGATAACTCCGCCGTTTC+CGG 0.356163 7.4:-947686 None:intergenic
GGCCATGAAAGTGTTGTAGA+AGG 0.364631 7.4:-946767 None:intergenic
AGTTTGAGTATGTGTGTTAG+TGG 0.374005 7.4:-946708 None:intergenic
CATGCGGTGCTCCTCTTTGC+CGG 0.374955 7.4:+947203 MS.gene22706:CDS
TTGAGAAAGTCCGGAGACTA+TGG 0.378424 7.4:-947005 None:intergenic
CTCGATACTTTCTATTACGT+TGG 0.395207 7.4:+947592 MS.gene22706:CDS
CGTAGGAACGTGACTTTGTT+GGG 0.396292 7.4:-947171 None:intergenic
AGAAGGAGATGGCTAATAAC+AGG 0.397096 7.4:-946661 None:intergenic
ATCTTGCGAGCTCGCGGGTC+GGG 0.397716 7.4:+948028 MS.gene22706:CDS
TAGCCACACCACGTCACTTC+CGG 0.407176 7.4:-947098 None:intergenic
AGGTGCTGATGTGTCCCTTC+CGG 0.412328 7.4:+947885 MS.gene22706:CDS
AAGAGAATTTCTGATTGAAC+CGG 0.429358 7.4:-947462 None:intergenic
ATGTTATTCGCAAGCAGATC+CGG 0.430664 7.4:+947141 MS.gene22706:CDS
ATGAGTGGTTTGTCCATCAT+TGG 0.431680 7.4:+947970 MS.gene22706:CDS
GCTGCTGGTTTATTAGGTCT+TGG 0.436699 7.4:+947403 MS.gene22706:CDS
CGGGTCGGGTTTGCACCAAA+AGG 0.439668 7.4:+948042 MS.gene22706:CDS
TATTTCACTCGCATCGGCGT+TGG 0.442972 7.4:+947040 MS.gene22706:CDS
GAGGCGGAGACGCCACGAAC+TGG 0.443110 7.4:-947643 None:intergenic
TGTCAGTATCAAGTTTCTTA+CGG 0.448845 7.4:+947265 MS.gene22706:CDS
TGTAAGCAGGTCGAGTCAAT+CGG 0.453067 7.4:-947729 None:intergenic
GAAATTCTCTTATTGTCTTG+TGG 0.459018 7.4:+947474 MS.gene22706:CDS
CTGCTGAATATTACCAATGA+TGG 0.459225 7.4:-947983 None:intergenic
GCGTAGGAACGTGACTTTGT+TGG 0.461415 7.4:-947172 None:intergenic
TGGGTCTTCGGATTCGGGTA+TGG 0.461666 7.4:-946810 None:intergenic
TTCCGGTCCAAACCGGTCGC+CGG 0.464037 7.4:+947443 MS.gene22706:CDS
TGCCGGCGACTCGACACTGC+TGG 0.466483 7.4:+947220 MS.gene22706:CDS
TCTATTACGTTGGACTTCTC+GGG 0.468916 7.4:+947602 MS.gene22706:CDS
TCTCTTATTGTCTTGTGGAC+CGG 0.472788 7.4:+947479 MS.gene22706:CDS
AACCGGCGACCGGTTTGGAC+CGG 0.474663 7.4:-947445 None:intergenic
AAACTCGACACCGCCGGAAA+CGG 0.478325 7.4:+947673 MS.gene22706:CDS
AGTTTCTGCTTTGCTTTCGC+CGG 0.481212 7.4:+947943 MS.gene22706:CDS
TAATGAGAGTGTGAAGGAGA+AGG 0.487577 7.4:-946678 None:intergenic
GGACAAACCACTCATCGTTC+CGG 0.488760 7.4:-947962 None:intergenic
TTTCTGATTGAACCGGCGAC+CGG 0.493839 7.4:-947455 None:intergenic
GCCGCTGCCTTGAGAAAGTC+CGG 0.495381 7.4:-947014 None:intergenic
GAAGCCAGTAGCGGATCTAT+GGG 0.498743 7.4:-946975 None:intergenic
GTCGGTGGTGCTCCAGTTCG+TGG 0.500304 7.4:+947631 MS.gene22706:CDS
ATCAAGTTTCTTACGGCGAT+GGG 0.503051 7.4:+947272 MS.gene22706:CDS
GAAAGTGTTGTAGAAGGGTT+GGG 0.503412 7.4:-946761 None:intergenic
TGAGATGGAAGAGTTGTTGT+GGG 0.508451 7.4:-946892 None:intergenic
TGAAAGTGTTGTAGAAGGGT+TGG 0.509537 7.4:-946762 None:intergenic
AAAGACGCGCGTGGCGCGTG+TGG 0.510956 7.4:+947339 MS.gene22706:CDS
TATCAAGTTTCTTACGGCGA+TGG 0.511342 7.4:+947271 MS.gene22706:CDS
CATCTCTTTGGAGTCTGAGA+TGG 0.515518 7.4:-946907 None:intergenic
TCTCTATCTCCAACAATGGA+AGG 0.516165 7.4:+946614 None:intergenic
AACCAGCAGTGTCGAGTCGC+CGG 0.516796 7.4:-947222 None:intergenic
CGTCCCCATAGATCCGCTAC+TGG 0.516821 7.4:+946971 MS.gene22706:CDS
CTGAGAGATGCATTTAGGCT+TGG 0.527744 7.4:+947757 MS.gene22706:CDS
TTGAGTATGTGTGTTAGTGG+TGG 0.527925 7.4:-946705 None:intergenic
TTTGAGAAGTGGAGTGAACC+GGG 0.528011 7.4:-947560 None:intergenic
ATACTGACAAACCTTGCTCT+TGG 0.528974 7.4:-947251 None:intergenic
CTCTTCAAACTCGACACCGC+CGG 0.530466 7.4:+947667 MS.gene22706:CDS
TGGTGCTACGCATCTGAAGA+AGG 0.532453 7.4:+947777 MS.gene22706:CDS
TGGCTAATAACAGGAAGAGA+AGG 0.533278 7.4:-946652 None:intergenic
GAGTGTGAAGGAGAAGGAGA+TGG 0.533697 7.4:-946672 None:intergenic
TTCAGCAGCTCCATAGTCTC+CGG 0.534475 7.4:+946995 MS.gene22706:CDS
GCTTTCGCCGGAACGATGAG+TGG 0.540100 7.4:+947955 MS.gene22706:CDS
GGCAAAGAGGAGCACCGCAT+GGG 0.541095 7.4:-947201 None:intergenic
TCTCTCAGTGCAATGTAAGC+AGG 0.541916 7.4:-947742 None:intergenic
GCGCGTGTGGCTTTAGGGTG+TGG 0.542668 7.4:+947352 MS.gene22706:CDS
CTCGACACCGCCGGAAACGG+CGG 0.545168 7.4:+947676 MS.gene22706:CDS
GATCTTGCGAGCTCGCGGGT+CGG 0.545739 7.4:+948027 MS.gene22706:CDS
CGGCTGTTTCTCGAACCGCC+CGG 0.547042 7.4:+947542 MS.gene22706:CDS
CTGAGATGGAAGAGTTGTTG+TGG 0.551222 7.4:-946893 None:intergenic
CGGCAAAGAGGAGCACCGCA+TGG 0.553154 7.4:-947202 None:intergenic
ACCATGAAAACATACCTAGC+TGG 0.553972 7.4:-947067 None:intergenic
ATCTGGTCTGACGGAAGTGA+AGG 0.555136 7.4:+947837 MS.gene22706:CDS
GTAAGCAGGTCGAGTCAATC+GGG 0.555188 7.4:-947728 None:intergenic
TGTTGCGAAGGATTTGACTC+TGG 0.555494 7.4:-946933 None:intergenic
TGCGAATAACATTTCCGGCA+TGG 0.557017 7.4:-947130 None:intergenic
CTTTGATTTATCTGGTCTGA+CGG 0.557950 7.4:+947828 MS.gene22706:CDS
GGCTACAATGTGCGCCATGC+CGG 0.558061 7.4:+947116 MS.gene22706:CDS
GGGTCGGGTTTGCACCAAAA+GGG 0.558186 7.4:+948043 MS.gene22706:CDS
TTGGTAATATTCAGCAGCAA+GGG 0.558689 7.4:+947989 MS.gene22706:CDS
GGAATCAAGTAATTCTGTGC+CGG 0.577242 7.4:-947904 None:intergenic
ATTGGTAATATTCAGCAGCA+AGG 0.580766 7.4:+947988 MS.gene22706:CDS
GGACTTCTCGGGATCAGTGT+CGG 0.581085 7.4:+947613 MS.gene22706:CDS
GTGTCGAGTCGCCGGCAAAG+AGG 0.582989 7.4:-947214 None:intergenic
TCGGAACGTGAGTGTTTCAG+TGG 0.583381 7.4:-947317 None:intergenic
GGTTTATTAGGTCTTGGTCG+TGG 0.585085 7.4:+947409 MS.gene22706:CDS
GGCGAATATTTCACTCGCAT+CGG 0.585714 7.4:+947034 MS.gene22706:CDS
ACCGCATGGGATTCCGGCGT+AGG 0.586025 7.4:-947188 None:intergenic
TTATGATCTTGCGAGCTCGC+GGG 0.587097 7.4:+948023 MS.gene22706:CDS
TTTGTTGAGAGCTGTTGCGA+AGG 0.589319 7.4:-946945 None:intergenic
TCAAGTAATTCTGTGCCGGA+AGG 0.590991 7.4:-947900 None:intergenic
ATAGTCTCCGGACTTTCTCA+AGG 0.594667 7.4:+947007 MS.gene22706:CDS
CTCTATCTCCAACAATGGAA+GGG 0.596956 7.4:+946615 None:intergenic
TGAAAATGAAGCACTAATGT+CGG 0.602965 7.4:-947862 None:intergenic
GTTATGATCTTGCGAGCTCG+CGG 0.603166 7.4:+948022 MS.gene22706:CDS
GAGATGGAAGAGTTGTTGTG+GGG 0.607914 7.4:-946891 None:intergenic
ACAAAGTCACGTTCCTACGC+CGG 0.611027 7.4:+947175 MS.gene22706:CDS
AAACTCCCACTGTTGTCCAC+CGG 0.611488 7.4:-947925 None:intergenic
TCGGCGTTGGAACTCCAGCT+AGG 0.613832 7.4:+947053 MS.gene22706:CDS
TGGTTGCAACACCAAGAGCA+AGG 0.613988 7.4:+947240 MS.gene22706:CDS
GGCTAATAACAGGAAGAGAA+GGG 0.614090 7.4:-946651 None:intergenic
TCCGGACTTTCTCAAGGCAG+CGG 0.615778 7.4:+947013 MS.gene22706:CDS
GATAACTCCGCCGTTTCCGG+CGG 0.625472 7.4:-947683 None:intergenic
TTGATTCCGGTGGACAACAG+TGG 0.625730 7.4:+947919 MS.gene22706:CDS
TACGCATCTGAAGAAGGCGC+CGG 0.628413 7.4:+947783 MS.gene22706:CDS
ACACCGGAAGTGACGTGGTG+TGG 0.630163 7.4:+947095 MS.gene22706:CDS
CTTCTCGGGATCAGTGTCGG+TGG 0.631380 7.4:+947616 MS.gene22706:CDS
GTCTATGTGGTGTAGCTGAA+GGG 0.633304 7.4:-946849 None:intergenic
TGATTCCGGTGGACAACAGT+GGG 0.634457 7.4:+947920 MS.gene22706:CDS
GTATCGAACAACGAAAACTC+CGG 0.636421 7.4:-947802 None:intergenic
CAAGTAATTCTGTGCCGGAA+GGG 0.643698 7.4:-947899 None:intergenic
CACGTTCCGAAAGACGCGCG+TGG 0.647276 7.4:+947330 MS.gene22706:CDS
TGTCTATGTGGTGTAGCTGA+AGG 0.647590 7.4:-946850 None:intergenic
TCTCGACACCGGAAGTGACG+TGG 0.648988 7.4:+947090 MS.gene22706:CDS
GCCATGAAAGTGTTGTAGAA+GGG 0.671272 7.4:-946766 None:intergenic
GGAGCTGCTGAAGCCAGTAG+CGG 0.671965 7.4:-946984 None:intergenic
ACAGAATTACTTGATTCCGG+TGG 0.679406 7.4:+947909 MS.gene22706:CDS
GGTGTCGAGTTTGAAGAGCG+AGG 0.684854 7.4:-947662 None:intergenic
CGGAGGAGAGAGTGTCTATG+TGG 0.693842 7.4:-946862 None:intergenic
TCCTACGCCGGAATCCCATG+CGG 0.708485 7.4:+947187 MS.gene22706:CDS
GGTTGTTAATGAGAGTGTGA+AGG 0.708906 7.4:-946684 None:intergenic
AAGCCAGTAGCGGATCTATG+GGG 0.720794 7.4:-946974 None:intergenic
GGGTGTGGACATGATAACGA+AGG 0.721683 7.4:+947367 MS.gene22706:CDS
GTCGAGTTTGAAGAGCGAGG+CGG 0.728421 7.4:-947659 None:intergenic
GAGAAGTGGAGTGAACCGGG+CGG 0.786995 7.4:-947557 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATAGAAAGTATCGAGTTT+AGG - chr7.4:947589-947608 None:intergenic 25.0%
AAGAGAATTTCTGATTGAAC+CGG - chr7.4:947465-947484 None:intergenic 30.0%
GAAATTCTCTTATTGTCTTG+TGG + chr7.4:947474-947493 MS.gene22706:CDS 30.0%
GATAAAGATTCTTCTGATTC+TGG - chr7.4:946791-946810 None:intergenic 30.0%
TGTCAGTATCAAGTTTCTTA+CGG + chr7.4:947265-947284 MS.gene22706:CDS 30.0%
! ACATTAGTGCTTCATTTTCA+AGG + chr7.4:947865-947884 MS.gene22706:CDS 30.0%
! GATACTTGCTTTGATTTATC+TGG + chr7.4:947820-947839 MS.gene22706:CDS 30.0%
! TGAAAATGAAGCACTAATGT+CGG - chr7.4:947865-947884 None:intergenic 30.0%
!! AGTTTAGGATTTTTGAGAAG+TGG - chr7.4:947574-947593 None:intergenic 30.0%
AGTTTGAGTATGTGTGTTAG+TGG - chr7.4:946711-946730 None:intergenic 35.0%
CTCGATACTTTCTATTACGT+TGG + chr7.4:947592-947611 MS.gene22706:CDS 35.0%
CTGCTGAATATTACCAATGA+TGG - chr7.4:947986-948005 None:intergenic 35.0%
TTCTATTACGTTGGACTTCT+CGG + chr7.4:947601-947620 MS.gene22706:CDS 35.0%
! ATTGGTAATATTCAGCAGCA+AGG + chr7.4:947988-948007 MS.gene22706:CDS 35.0%
! CTTTGATTTATCTGGTCTGA+CGG + chr7.4:947828-947847 MS.gene22706:CDS 35.0%
! TCGTGGTAGATTATCTTTTC+CGG + chr7.4:947426-947445 MS.gene22706:CDS 35.0%
! TTGGTAATATTCAGCAGCAA+GGG + chr7.4:947989-948008 MS.gene22706:CDS 35.0%
!! TGATTCTTCTTTTGGGTCTT+CGG - chr7.4:946825-946844 None:intergenic 35.0%
ACAGAATTACTTGATTCCGG+TGG + chr7.4:947909-947928 MS.gene22706:CDS 40.0%
ACCATGAAAACATACCTAGC+TGG - chr7.4:947070-947089 None:intergenic 40.0%
ACCCTTCTACAACACTTTCA+TGG + chr7.4:946765-946784 MS.gene22706:CDS 40.0%
AGAAGGAGATGGCTAATAAC+AGG - chr7.4:946664-946683 None:intergenic 40.0%
ATACTGACAAACCTTGCTCT+TGG - chr7.4:947254-947273 None:intergenic 40.0%
ATATTCAGCAGCAAGGGTTT+CGG + chr7.4:947995-948014 MS.gene22706:CDS 40.0%
ATCAAGTTTCTTACGGCGAT+GGG + chr7.4:947272-947291 MS.gene22706:CDS 40.0%
ATGTTATTCGCAAGCAGATC+CGG + chr7.4:947141-947160 MS.gene22706:CDS 40.0%
CTGCTTGCGAATAACATTTC+CGG - chr7.4:947138-947157 None:intergenic 40.0%
GACTTTGTTGGGTCAAAAAC+CGG - chr7.4:947163-947182 None:intergenic 40.0%
GGAATCAAGTAATTCTGTGC+CGG - chr7.4:947907-947926 None:intergenic 40.0%
GGCACAGAATTACTTGATTC+CGG + chr7.4:947906-947925 MS.gene22706:CDS 40.0%
GGCTAATAACAGGAAGAGAA+GGG - chr7.4:946654-946673 None:intergenic 40.0%
GTATCGAACAACGAAAACTC+CGG - chr7.4:947805-947824 None:intergenic 40.0%
TATCAAGTTTCTTACGGCGA+TGG + chr7.4:947271-947290 MS.gene22706:CDS 40.0%
TCACCAAAAACAACGGAAGA+CGG - chr7.4:947520-947539 None:intergenic 40.0%
TCTATTACGTTGGACTTCTC+GGG + chr7.4:947602-947621 MS.gene22706:CDS 40.0%
TCTCTTATTGTCTTGTGGAC+CGG + chr7.4:947479-947498 MS.gene22706:CDS 40.0%
TGAGATGGAAGAGTTGTTGT+GGG - chr7.4:946895-946914 None:intergenic 40.0%
TGGCTAATAACAGGAAGAGA+AGG - chr7.4:946655-946674 None:intergenic 40.0%
TTGAGTATGTGTGTTAGTGG+TGG - chr7.4:946708-946727 None:intergenic 40.0%
TTGCACTGAGAGATGCATTT+AGG + chr7.4:947752-947771 MS.gene22706:CDS 40.0%
! AGGGAGAGTGATTCTTCTTT+TGG - chr7.4:946833-946852 None:intergenic 40.0%
! ATGAGTGGTTTGTCCATCAT+TGG + chr7.4:947970-947989 MS.gene22706:CDS 40.0%
! GATAACGAAGGTCTTTTCGT+TGG + chr7.4:947379-947398 MS.gene22706:CDS 40.0%
! GGGAGAGTGATTCTTCTTTT+GGG - chr7.4:946832-946851 None:intergenic 40.0%
! GGTTGTTAATGAGAGTGTGA+AGG - chr7.4:946687-946706 None:intergenic 40.0%
! TAATGAGAGTGTGAAGGAGA+AGG - chr7.4:946681-946700 None:intergenic 40.0%
! TCCAGCTAGGTATGTTTTCA+TGG + chr7.4:947066-947085 MS.gene22706:CDS 40.0%
! TTATCTTTTCCGGTCCAAAC+CGG + chr7.4:947436-947455 MS.gene22706:CDS 40.0%
!! AAACCGTCTTCCGTTGTTTT+TGG + chr7.4:947514-947533 MS.gene22706:CDS 40.0%
!! GAAAGTGTTGTAGAAGGGTT+GGG - chr7.4:946764-946783 None:intergenic 40.0%
!! GCCATGAAAGTGTTGTAGAA+GGG - chr7.4:946769-946788 None:intergenic 40.0%
!! TGAAAGTGTTGTAGAAGGGT+TGG - chr7.4:946765-946784 None:intergenic 40.0%
!! TTCTTTTGGGTCTTCGGATT+CGG - chr7.4:946819-946838 None:intergenic 40.0%
!! TTTTGAGAAGTGGAGTGAAC+CGG - chr7.4:947564-947583 None:intergenic 40.0%
!!! TTCCGTTGTTTTTGGTGACT+CGG + chr7.4:947522-947541 MS.gene22706:CDS 40.0%
AATGATAACTCCGCCGTTTC+CGG - chr7.4:947689-947708 None:intergenic 45.0%
AGCCGAGTCACCAAAAACAA+CGG - chr7.4:947527-947546 None:intergenic 45.0%
AGTTTCTGCTTTGCTTTCGC+CGG + chr7.4:947943-947962 MS.gene22706:CDS 45.0%
ATAGTCTCCGGACTTTCTCA+AGG + chr7.4:947007-947026 MS.gene22706:CDS 45.0%
CAAGTAATTCTGTGCCGGAA+GGG - chr7.4:947902-947921 None:intergenic 45.0%
CGTAGGAACGTGACTTTGTT+GGG - chr7.4:947174-947193 None:intergenic 45.0%
CTGAGAGATGCATTTAGGCT+TGG + chr7.4:947757-947776 MS.gene22706:CDS 45.0%
CTGAGATGGAAGAGTTGTTG+TGG - chr7.4:946896-946915 None:intergenic 45.0%
GAGATGGAAGAGTTGTTGTG+GGG - chr7.4:946894-946913 None:intergenic 45.0%
GGCGAATATTTCACTCGCAT+CGG + chr7.4:947034-947053 MS.gene22706:CDS 45.0%
GGTTTATTAGGTCTTGGTCG+TGG + chr7.4:947409-947428 MS.gene22706:CDS 45.0%
GTCTATGTGGTGTAGCTGAA+GGG - chr7.4:946852-946871 None:intergenic 45.0%
TATTCAGCAGCAAGGGTTTC+GGG + chr7.4:947996-948015 MS.gene22706:CDS 45.0%
TCAAGTAATTCTGTGCCGGA+AGG - chr7.4:947903-947922 None:intergenic 45.0%
TCTCTCAGTGCAATGTAAGC+AGG - chr7.4:947745-947764 None:intergenic 45.0%
TGCGAATAACATTTCCGGCA+TGG - chr7.4:947133-947152 None:intergenic 45.0%
TGTAAGCAGGTCGAGTCAAT+CGG - chr7.4:947732-947751 None:intergenic 45.0%
TGTCTATGTGGTGTAGCTGA+AGG - chr7.4:946853-946872 None:intergenic 45.0%
TGTTGCGAAGGATTTGACTC+TGG - chr7.4:946936-946955 None:intergenic 45.0%
TTGAGAAAGTCCGGAGACTA+TGG - chr7.4:947008-947027 None:intergenic 45.0%
TTTGAGAAGTGGAGTGAACC+GGG - chr7.4:947563-947582 None:intergenic 45.0%
TTTGTTGAGAGCTGTTGCGA+AGG - chr7.4:946948-946967 None:intergenic 45.0%
! GTTTTCATGGTTCTCGACAC+CGG + chr7.4:947079-947098 MS.gene22706:CDS 45.0%
!! ACGGTTTTGATGTAGCAGAC+CGG - chr7.4:947501-947520 None:intergenic 45.0%
!! CATCTCTTTGGAGTCTGAGA+TGG - chr7.4:946910-946929 None:intergenic 45.0%
!! GAGTTGTTGTGGGGTTTTGT+CGG - chr7.4:946885-946904 None:intergenic 45.0%
!! GCTGCTGGTTTATTAGGTCT+TGG + chr7.4:947403-947422 MS.gene22706:CDS 45.0%
!! GGCCATGAAAGTGTTGTAGA+AGG - chr7.4:946770-946789 None:intergenic 45.0%
!! GGCGGAGTTATCATTGATTC+AGG + chr7.4:947694-947713 MS.gene22706:CDS 45.0%
!! GTTGGTGCTGCTGGTTTATT+AGG + chr7.4:947397-947416 MS.gene22706:CDS 45.0%
!! TCTTTTGGGTCTTCGGATTC+GGG - chr7.4:946818-946837 None:intergenic 45.0%
AAACTCCCACTGTTGTCCAC+CGG - chr7.4:947928-947947 None:intergenic 50.0%
ACAAAGTCACGTTCCTACGC+CGG + chr7.4:947175-947194 MS.gene22706:CDS 50.0%
ATCTGGTCTGACGGAAGTGA+AGG + chr7.4:947837-947856 MS.gene22706:CDS 50.0%
GAGTGTGAAGGAGAAGGAGA+TGG - chr7.4:946675-946694 None:intergenic 50.0%
GCGTAGGAACGTGACTTTGT+TGG - chr7.4:947175-947194 None:intergenic 50.0%
GGACAAACCACTCATCGTTC+CGG - chr7.4:947965-947984 None:intergenic 50.0%
GGCGATGGGTCTTTCACTTT+CGG + chr7.4:947286-947305 MS.gene22706:CDS 50.0%
GTAAGCAGGTCGAGTCAATC+GGG - chr7.4:947731-947750 None:intergenic 50.0%
GTTATGATCTTGCGAGCTCG+CGG + chr7.4:948022-948041 MS.gene22706:CDS 50.0%
TCGGAACGTGAGTGTTTCAG+TGG - chr7.4:947320-947339 None:intergenic 50.0%
TGACTCTGGCAGCATCTCTT+TGG - chr7.4:946922-946941 None:intergenic 50.0%
TGATTCCGGTGGACAACAGT+GGG + chr7.4:947920-947939 MS.gene22706:CDS 50.0%
TGGTTGCAACACCAAGAGCA+AGG + chr7.4:947240-947259 MS.gene22706:CDS 50.0%
TTATGATCTTGCGAGCTCGC+GGG + chr7.4:948023-948042 MS.gene22706:CDS 50.0%
TTCAGCAGCTCCATAGTCTC+CGG + chr7.4:946995-947014 MS.gene22706:CDS 50.0%
TTGATTCCGGTGGACAACAG+TGG + chr7.4:947919-947938 MS.gene22706:CDS 50.0%
TTTCTGATTGAACCGGCGAC+CGG - chr7.4:947458-947477 None:intergenic 50.0%
! GGGTGTGGACATGATAACGA+AGG + chr7.4:947367-947386 MS.gene22706:CDS 50.0%
! TATTTCACTCGCATCGGCGT+TGG + chr7.4:947040-947059 MS.gene22706:CDS 50.0%
!! AAGCCAGTAGCGGATCTATG+GGG - chr7.4:946977-946996 None:intergenic 50.0%
!! GAAGCCAGTAGCGGATCTAT+GGG - chr7.4:946978-946997 None:intergenic 50.0%
!! TGAAGCCAGTAGCGGATCTA+TGG - chr7.4:946979-946998 None:intergenic 50.0%
!! TGGTGCTACGCATCTGAAGA+AGG + chr7.4:947777-947796 MS.gene22706:CDS 50.0%
!! TTGTTGTGGGGTTTTGTCGG+AGG - chr7.4:946882-946901 None:intergenic 50.0%
AAACTCGACACCGCCGGAAA+CGG + chr7.4:947673-947692 MS.gene22706:CDS 55.0%
CTCTTCAAACTCGACACCGC+CGG + chr7.4:947667-947686 MS.gene22706:CDS 55.0%
GGACTTCTCGGGATCAGTGT+CGG + chr7.4:947613-947632 MS.gene22706:CDS 55.0%
GGGTCGGGTTTGCACCAAAA+GGG + chr7.4:948043-948062 MS.gene22706:CDS 55.0%
GTCGAGTTTGAAGAGCGAGG+CGG - chr7.4:947662-947681 None:intergenic 55.0%
TAGCCACACCACGTCACTTC+CGG - chr7.4:947101-947120 None:intergenic 55.0%
TCCGGACTTTCTCAAGGCAG+CGG + chr7.4:947013-947032 MS.gene22706:CDS 55.0%
TGGGTCTTCGGATTCGGGTA+TGG - chr7.4:946813-946832 None:intergenic 55.0%
! GGTGTCGAGTTTGAAGAGCG+AGG - chr7.4:947665-947684 None:intergenic 55.0%
! TACGCATCTGAAGAAGGCGC+CGG + chr7.4:947783-947802 MS.gene22706:CDS 55.0%
!! AGGTGCTGATGTGTCCCTTC+CGG + chr7.4:947885-947904 MS.gene22706:CDS 55.0%
!! CGGAGGAGAGAGTGTCTATG+TGG - chr7.4:946865-946884 None:intergenic 55.0%
!!! GGTCTTTTCGTTGGTGCTGC+TGG + chr7.4:947388-947407 MS.gene22706:CDS 55.0%
ACACCGGAAGTGACGTGGTG+TGG + chr7.4:947095-947114 MS.gene22706:CDS 60.0%
CATGCGGTGCTCCTCTTTGC+CGG + chr7.4:947203-947222 MS.gene22706:CDS 60.0%
CGGGTCGGGTTTGCACCAAA+AGG + chr7.4:948042-948061 MS.gene22706:CDS 60.0%
CGTCCCCATAGATCCGCTAC+TGG + chr7.4:946971-946990 MS.gene22706:CDS 60.0%
GAGAAGTGGAGTGAACCGGG+CGG - chr7.4:947560-947579 None:intergenic 60.0%
GATAACTCCGCCGTTTCCGG+CGG - chr7.4:947686-947705 None:intergenic 60.0%
GATTGAACCGGCGACCGGTT+TGG - chr7.4:947453-947472 None:intergenic 60.0%
GCCGCTGCCTTGAGAAAGTC+CGG - chr7.4:947017-947036 None:intergenic 60.0%
GCTTTCGCCGGAACGATGAG+TGG + chr7.4:947955-947974 MS.gene22706:CDS 60.0%
GGAGCTGCTGAAGCCAGTAG+CGG - chr7.4:946987-947006 None:intergenic 60.0%
GGCTACAATGTGCGCCATGC+CGG + chr7.4:947116-947135 MS.gene22706:CDS 60.0%
TCCTACGCCGGAATCCCATG+CGG + chr7.4:947187-947206 MS.gene22706:CDS 60.0%
TCTCGACACCGGAAGTGACG+TGG + chr7.4:947090-947109 MS.gene22706:CDS 60.0%
! AACCAGCAGTGTCGAGTCGC+CGG - chr7.4:947225-947244 None:intergenic 60.0%
! CTTCTCGGGATCAGTGTCGG+TGG + chr7.4:947616-947635 MS.gene22706:CDS 60.0%
! TCGGCGTTGGAACTCCAGCT+AGG + chr7.4:947053-947072 MS.gene22706:CDS 60.0%
!! AGGAGCACCGCATGGGATTC+CGG - chr7.4:947197-947216 None:intergenic 60.0%
!! GGCAAAGAGGAGCACCGCAT+GGG - chr7.4:947204-947223 None:intergenic 60.0%
ACCGCATGGGATTCCGGCGT+AGG - chr7.4:947191-947210 None:intergenic 65.0%
ATCTTGCGAGCTCGCGGGTC+GGG + chr7.4:948028-948047 MS.gene22706:CDS 65.0%
CACGTTCCGAAAGACGCGCG+TGG + chr7.4:947330-947349 MS.gene22706:CDS 65.0%
GATCTTGCGAGCTCGCGGGT+CGG + chr7.4:948027-948046 MS.gene22706:CDS 65.0%
GTCGGTGGTGCTCCAGTTCG+TGG + chr7.4:947631-947650 MS.gene22706:CDS 65.0%
GTGTCGAGTCGCCGGCAAAG+AGG - chr7.4:947217-947236 None:intergenic 65.0%
TTCCGGTCCAAACCGGTCGC+CGG + chr7.4:947443-947462 MS.gene22706:CDS 65.0%
! GCGTGGCGCGTGTGGCTTTA+GGG + chr7.4:947347-947366 MS.gene22706:CDS 65.0%
!! AACCGGCGACCGGTTTGGAC+CGG - chr7.4:947448-947467 None:intergenic 65.0%
!! CGGCAAAGAGGAGCACCGCA+TGG - chr7.4:947205-947224 None:intergenic 65.0%
!! CGGCTGTTTCTCGAACCGCC+CGG + chr7.4:947542-947561 MS.gene22706:CDS 65.0%
!! GCGCGTGTGGCTTTAGGGTG+TGG + chr7.4:947352-947371 MS.gene22706:CDS 65.0%
AAAGACGCGCGTGGCGCGTG+TGG + chr7.4:947339-947358 MS.gene22706:CDS 70.0%
CACGCGCCACGCGCGTCTTT+CGG - chr7.4:947339-947358 None:intergenic 70.0%
CGCGTGGCGCGTGTGGCTTT+AGG + chr7.4:947346-947365 MS.gene22706:CDS 70.0%
CTCGACACCGCCGGAAACGG+CGG + chr7.4:947676-947695 MS.gene22706:CDS 70.0%
GAGGCGGAGACGCCACGAAC+TGG - chr7.4:947646-947665 None:intergenic 70.0%
TGCCGGCGACTCGACACTGC+TGG + chr7.4:947220-947239 MS.gene22706:CDS 70.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 946629 948074 946629 ID=MS.gene22706
chr7.4 mRNA 946629 948074 946629 ID=MS.gene22706.t1;Parent=MS.gene22706
chr7.4 exon 946629 948074 946629 ID=MS.gene22706.t1.exon1;Parent=MS.gene22706.t1
chr7.4 CDS 946629 948074 946629 ID=cds.MS.gene22706.t1;Parent=MS.gene22706.t1
Gene Sequence

>MS.gene22706

ATGGAAGGGAACAATAACAAAACCCTTCTCTTCCTGTTATTAGCCATCTCCTTCTCCTTCACACTCTCATTAACAACCACCACTAACACACATACTCAAACTCAAACTCAAACGCTTTCTATTCGCTCTCTTCCCAACCCTTCTACAACACTTTCATGGCCAGAATCAGAAGAATCTTTATCCATACCCGAATCCGAAGACCCAAAAGAAGAATCACTCTCCCTTCAGCTACACCACATAGACACTCTCTCCTCCGACAAAACCCCACAACAACTCTTCCATCTCAGACTCCAAAGAGATGCTGCCAGAGTCAAATCCTTCGCAACAGCTCTCAACAAAACTCGTCCCCATAGATCCGCTACTGGCTTCAGCAGCTCCATAGTCTCCGGACTTTCTCAAGGCAGCGGCGAATATTTCACTCGCATCGGCGTTGGAACTCCAGCTAGGTATGTTTTCATGGTTCTCGACACCGGAAGTGACGTGGTGTGGCTACAATGTGCGCCATGCCGGAAATGTTATTCGCAAGCAGATCCGGTTTTTGACCCAACAAAGTCACGTTCCTACGCCGGAATCCCATGCGGTGCTCCTCTTTGCCGGCGACTCGACACTGCTGGTTGCAACACCAAGAGCAAGGTTTGTCAGTATCAAGTTTCTTACGGCGATGGGTCTTTCACTTTCGGTGATTTCTCCACTGAAACACTCACGTTCCGAAAGACGCGCGTGGCGCGTGTGGCTTTAGGGTGTGGACATGATAACGAAGGTCTTTTCGTTGGTGCTGCTGGTTTATTAGGTCTTGGTCGTGGTAGATTATCTTTTCCGGTCCAAACCGGTCGCCGGTTCAATCAGAAATTCTCTTATTGTCTTGTGGACCGGTCTGCTACATCAAAACCGTCTTCCGTTGTTTTTGGTGACTCGGCTGTTTCTCGAACCGCCCGGTTCACTCCACTTCTCAAAAATCCTAAACTCGATACTTTCTATTACGTTGGACTTCTCGGGATCAGTGTCGGTGGTGCTCCAGTTCGTGGCGTCTCCGCCTCGCTCTTCAAACTCGACACCGCCGGAAACGGCGGAGTTATCATTGATTCAGGAACTTCAGTAACCCGATTGACTCGACCTGCTTACATTGCACTGAGAGATGCATTTAGGCTTGGTGCTACGCATCTGAAGAAGGCGCCGGAGTTTTCGTTGTTCGATACTTGCTTTGATTTATCTGGTCTGACGGAAGTGAAGGTGCCGACATTAGTGCTTCATTTTCAAGGTGCTGATGTGTCCCTTCCGGCACAGAATTACTTGATTCCGGTGGACAACAGTGGGAGTTTCTGCTTTGCTTTCGCCGGAACGATGAGTGGTTTGTCCATCATTGGTAATATTCAGCAGCAAGGGTTTCGGGTCAGTTATGATCTTGCGAGCTCGCGGGTCGGGTTTGCACCAAAAGGGTGTGAATGA
Protein sequence

>MS.gene22706.t1

MEGNNNKTLLFLLLAISFSFTLSLTTTTNTHTQTQTQTLSIRSLPNPSTTLSWPESEESLSIPESEDPKEESLSLQLHHIDTLSSDKTPQQLFHLRLQRDAARVKSFATALNKTRPHRSATGFSSSIVSGLSQGSGEYFTRIGVGTPARYVFMVLDTGSDVVWLQCAPCRKCYSQADPVFDPTKSRSYAGIPCGAPLCRRLDTAGCNTKSKVCQYQVSYGDGSFTFGDFSTETLTFRKTRVARVALGCGHDNEGLFVGAAGLLGLGRGRLSFPVQTGRRFNQKFSYCLVDRSATSKPSSVVFGDSAVSRTARFTPLLKNPKLDTFYYVGLLGISVGGAPVRGVSASLFKLDTAGNGGVIIDSGTSVTRLTRPAYIALRDAFRLGATHLKKAPEFSLFDTCFDLSGLTEVKVPTLVLHFQGADVSLPAQNYLIPVDNSGSFCFAFAGTMSGLSIIGNIQQQGFRVSYDLASSRVGFAPKGCE