AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene024430

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene024430.t1 MTR_7g117430 95.688 487 14 5 1 482 1 485 0.0 931
MS.gene024430.t1 MTR_1g111350 57.073 410 164 6 73 481 69 467 6.75e-145 423
MS.gene024430.t1 MTR_1g115210 46.833 442 221 9 48 481 51 486 3.04e-126 376
MS.gene024430.t1 MTR_1g039270 46.462 424 217 6 65 481 49 469 1.71e-119 358
MS.gene024430.t1 MTR_6g085010 49.647 425 188 10 73 481 77 491 3.65e-114 345
MS.gene024430.t1 MTR_2g028190 37.471 435 241 13 70 482 27 452 1.61e-87 275
MS.gene024430.t1 MTR_8g103880 39.353 371 213 8 109 474 85 448 3.34e-84 267
MS.gene024430.t1 MTR_3g097150 38.889 414 233 10 76 481 45 446 1.30e-83 265
MS.gene024430.t1 MTR_3g053710 36.607 448 232 11 55 482 52 467 1.66e-77 250
MS.gene024430.t1 MTR_5g091130 36.966 468 241 14 66 481 88 553 5.49e-77 251
MS.gene024430.t1 MTR_4g007740 35.763 439 248 11 63 481 53 477 9.22e-76 246
MS.gene024430.t1 MTR_3g046300 38.817 389 202 9 121 482 80 459 1.57e-75 244
MS.gene024430.t1 MTR_5g080890 38.764 356 198 12 137 481 85 431 1.39e-67 223
MS.gene024430.t1 MTR_5g044770 35.748 428 232 17 72 481 26 428 3.91e-66 219
MS.gene024430.t1 MTR_5g080960 38.764 356 198 12 137 481 85 431 6.66e-66 219
MS.gene024430.t1 MTR_3g053980 40.274 365 194 9 130 482 134 486 1.20e-65 219
MS.gene024430.t1 MTR_8g038280 35.104 433 237 18 70 481 24 433 4.48e-64 214
MS.gene024430.t1 MTR_8g096990 34.286 420 246 15 74 481 28 429 5.72e-63 211
MS.gene024430.t1 MTR_0036s0070 36.723 354 197 12 137 481 89 424 4.92e-61 206
MS.gene024430.t1 MTR_2g059460 37.534 373 201 11 126 481 47 404 1.25e-60 204
MS.gene024430.t1 MTR_3g028120 35.014 357 208 13 139 481 90 436 3.87e-59 201
MS.gene024430.t1 MTR_0036s0050 36.164 365 193 13 137 481 89 433 4.65e-58 198
MS.gene024430.t1 MTR_5g038360 36.141 368 211 16 127 481 78 434 1.26e-57 197
MS.gene024430.t1 MTR_2g059490 36.695 357 207 10 138 481 58 408 2.27e-57 196
MS.gene024430.t1 MTR_6g090290 33.886 422 250 13 74 481 28 434 2.77e-57 196
MS.gene024430.t1 MTR_0024s0040 36.313 358 200 13 139 481 64 408 5.86e-57 194
MS.gene024430.t1 MTR_2g067830 32.512 406 225 16 98 481 26 404 2.01e-56 193
MS.gene024430.t1 MTR_0036s0110 32.488 434 250 15 71 481 27 440 9.65e-56 192
MS.gene024430.t1 MTR_5g008110 34.719 409 227 16 93 481 25 413 2.32e-55 190
MS.gene024430.t1 MTR_8g038250 32.861 423 232 15 74 481 28 413 2.15e-53 185
MS.gene024430.t1 MTR_3g014290 36.000 350 209 6 136 481 78 416 2.77e-53 185
MS.gene024430.t1 MTR_1g037630 36.000 350 209 6 136 481 90 428 4.78e-53 184
MS.gene024430.t1 MTR_8g038310 32.000 425 230 17 74 481 29 411 4.63e-52 182
MS.gene024430.t1 MTR_4g109760 36.657 341 189 14 154 481 70 396 7.41e-51 178
MS.gene024430.t1 MTR_5g008150 32.331 399 234 14 103 481 28 410 1.23e-50 178
MS.gene024430.t1 MTR_5g008070 32.947 431 249 14 66 481 19 424 2.09e-50 177
MS.gene024430.t1 MTR_2g105300 32.164 342 196 14 157 478 54 379 1.91e-49 174
MS.gene024430.t1 MTR_5g044570 31.655 417 233 18 78 481 32 409 4.26e-49 174
MS.gene024430.t1 MTR_8g039540 31.579 437 264 13 61 481 16 433 4.29e-48 171
MS.gene024430.t1 MTR_6g088760 31.845 336 197 11 129 445 79 401 1.82e-46 169
MS.gene024430.t1 MTR_3g100500 34.699 366 220 8 125 482 84 438 9.65e-46 165
MS.gene024430.t1 MTR_4g045857 37.872 235 134 5 114 336 32 266 7.72e-41 148
MS.gene024430.t1 MTR_7g105850 30.414 411 226 16 118 482 70 466 1.42e-40 152
MS.gene024430.t1 MTR_5g012490 30.657 411 214 19 132 481 69 469 6.46e-39 147
MS.gene024430.t1 MTR_3g068000 31.830 377 204 18 145 482 80 442 8.62e-39 147
MS.gene024430.t1 MTR_2g055840 30.194 361 213 13 139 471 14 363 2.47e-38 144
MS.gene024430.t1 MTR_4g100990 30.488 410 217 18 132 481 69 470 3.33e-38 145
MS.gene024430.t1 MTR_5g077850 30.833 360 216 15 145 481 88 437 4.12e-38 144
MS.gene024430.t1 MTR_3g065160 28.090 445 268 20 61 481 10 426 1.90e-37 142
MS.gene024430.t1 MTR_2g063110 29.040 427 236 18 113 482 93 509 2.97e-37 143
MS.gene024430.t1 MTR_1g060750 30.894 369 191 14 135 481 48 374 3.22e-37 140
MS.gene024430.t1 MTR_5g077920 32.692 364 206 16 145 481 75 426 7.73e-32 127
MS.gene024430.t1 MTR_7g062360 30.400 375 214 20 143 482 64 426 1.03e-30 124
MS.gene024430.t1 MTR_2g070430 29.288 379 223 15 136 480 85 452 2.16e-30 123
MS.gene024430.t1 MTR_7g102750 27.493 371 233 13 137 481 80 440 3.52e-30 123
MS.gene024430.t1 MTR_7g080230 27.506 389 224 16 130 481 63 430 7.15e-30 122
MS.gene024430.t1 MTR_5g008090 33.013 312 165 15 194 481 21 312 7.62e-29 116
MS.gene024430.t1 MTR_6g084710 27.461 386 230 18 129 481 182 550 1.64e-28 119
MS.gene024430.t1 MTR_5g016260 26.146 371 224 14 136 481 86 431 1.11e-27 116
MS.gene024430.t1 MTR_1g078240 26.371 383 238 14 130 481 61 430 1.20e-27 115
MS.gene024430.t1 MTR_5g016260 26.146 371 224 14 136 481 86 431 1.67e-27 116
MS.gene024430.t1 MTR_4g056420 27.628 409 242 16 111 481 44 436 2.12e-27 115
MS.gene024430.t1 MTR_1g061940 27.105 380 229 14 135 481 80 444 8.71e-27 113
MS.gene024430.t1 MTR_1g078240 26.371 383 237 15 130 481 61 429 1.53e-26 112
MS.gene024430.t1 MTR_2g084550 28.140 430 255 16 79 481 35 437 2.42e-26 112
MS.gene024430.t1 MTR_8g075090 26.613 372 221 16 139 482 113 460 4.37e-26 110
MS.gene024430.t1 MTR_3g096930 27.660 376 219 17 137 482 83 435 7.73e-26 110
MS.gene024430.t1 MTR_7g102750 27.457 346 215 13 137 456 80 415 1.10e-25 109
MS.gene024430.t1 MTR_7g021510 26.649 379 228 17 137 481 71 433 2.54e-25 108
MS.gene024430.t1 MTR_8g094590 26.492 419 249 19 99 482 31 425 3.01e-25 108
MS.gene024430.t1 MTR_8g075090 26.415 371 221 16 139 481 113 459 3.45e-25 108
MS.gene024430.t1 MTR_4g095270 26.613 372 221 16 136 481 78 423 1.38e-24 107
MS.gene024430.t1 MTR_4g095270 26.146 371 224 14 136 481 78 423 1.63e-24 107
MS.gene024430.t1 MTR_1g078240 28.049 328 198 13 130 432 61 375 2.94e-24 104
MS.gene024430.t1 MTR_5g022880 27.394 376 213 17 139 481 113 461 3.20e-24 105
MS.gene024430.t1 MTR_6g084710 28.571 266 158 11 129 378 182 431 2.71e-23 103
MS.gene024430.t1 MTR_8g094590 27.249 378 220 18 99 445 31 384 3.25e-22 99.0
MS.gene024430.t1 MTR_8g075090 27.742 310 177 13 139 423 113 400 9.75e-22 98.2
MS.gene024430.t1 MTR_4g023650 26.506 415 241 21 109 482 29 420 3.66e-21 95.9
MS.gene024430.t1 MTR_1g029810 26.667 375 226 17 137 482 56 410 9.89e-21 94.7
MS.gene024430.t1 MTR_1g029810 26.260 377 225 17 137 482 56 410 2.36e-20 93.6
MS.gene024430.t1 MTR_5g080330 27.874 348 207 15 154 482 1 323 3.09e-20 93.2
MS.gene024430.t1 MTR_3g087780 25.067 371 232 12 139 482 100 451 4.34e-20 93.6
MS.gene024430.t1 MTR_8g094590 27.852 298 174 12 99 378 31 305 6.53e-20 90.5
MS.gene024430.t1 MTR_5g061690 26.630 368 227 14 139 482 102 450 2.28e-19 91.3
MS.gene024430.t1 MTR_8g075010 26.146 371 224 16 139 481 101 449 9.58e-18 86.3
MS.gene024430.t1 MTR_1g072380 25.897 390 226 17 138 477 56 432 6.15e-17 83.6
MS.gene024430.t1 MTR_2g022320 26.042 384 224 16 139 477 37 405 1.14e-16 82.4
MS.gene024430.t1 MTR_7g080230 26.347 334 193 15 180 481 48 360 4.09e-16 80.5
MS.gene024430.t1 MTR_1g072450 25.323 387 229 19 136 477 44 415 5.70e-16 80.5
MS.gene024430.t1 MTR_2g022480 24.922 321 188 14 139 421 50 355 1.31e-14 76.3
MS.gene024430.t1 MTR_2g022430 25.765 392 217 19 139 477 40 410 1.68e-13 72.8
MS.gene024430.t1 MTR_5g061690 25.817 306 193 12 192 482 25 311 3.22e-13 71.6
MS.gene024430.t1 MTR_2g022380 25.714 385 225 17 139 477 40 409 7.86e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene024430.t1 AT1G01300 79.469 414 78 2 74 481 72 484 0.0 645
MS.gene024430.t1 AT3G61820 67.532 462 132 9 35 481 25 483 0.0 565
MS.gene024430.t1 AT3G18490 48.509 503 219 16 11 481 6 500 3.00e-131 389
MS.gene024430.t1 AT1G25510 48.387 465 215 9 34 481 27 483 6.71e-129 383
MS.gene024430.t1 AT3G20015 47.630 422 209 6 68 481 53 470 3.91e-119 357
MS.gene024430.t1 AT5G10770 39.206 403 225 9 89 481 81 473 2.16e-83 265
MS.gene024430.t1 AT2G03200 36.768 427 234 13 76 481 47 458 3.09e-79 254
MS.gene024430.t1 AT5G10760 39.589 389 217 11 98 481 89 464 1.28e-73 240
MS.gene024430.t1 AT3G25700 38.084 407 213 17 109 481 48 449 7.31e-71 232
MS.gene024430.t1 AT2G42980 35.828 441 230 14 88 481 90 524 2.03e-68 228
MS.gene024430.t1 AT3G59080 39.474 380 202 11 126 481 157 532 6.07e-68 227
MS.gene024430.t1 AT5G33340 34.901 404 234 10 88 481 50 434 6.52e-68 224
MS.gene024430.t1 AT1G79720 34.259 432 249 12 72 481 64 482 1.31e-65 219
MS.gene024430.t1 AT3G54400 34.286 420 252 10 68 481 23 424 3.68e-62 209
MS.gene024430.t1 AT2G35615 33.483 445 258 14 60 481 14 443 2.12e-59 202
MS.gene024430.t1 AT1G64830 32.779 421 243 14 81 481 28 428 3.49e-59 201
MS.gene024430.t1 AT1G09750 35.262 363 221 8 128 482 93 449 7.97e-59 201
MS.gene024430.t1 AT3G59080 37.766 376 178 11 126 481 157 496 3.33e-58 200
MS.gene024430.t1 AT1G31450 33.256 430 252 16 72 481 27 441 6.39e-57 195
MS.gene024430.t1 AT3G12700 32.054 443 261 15 61 481 36 460 1.51e-47 171
MS.gene024430.t1 AT2G28040 31.653 357 201 11 138 481 64 390 7.13e-45 162
MS.gene024430.t1 AT2G28040 31.653 357 201 11 138 481 55 381 8.23e-45 161
MS.gene024430.t1 AT5G07030 32.394 355 221 10 136 482 112 455 4.88e-43 158
MS.gene024430.t1 AT2G28010 30.791 354 207 12 139 481 65 391 6.59e-43 157
MS.gene024430.t1 AT2G39710 32.249 369 205 15 143 477 69 426 5.02e-42 155
MS.gene024430.t1 AT5G02190 34.043 376 193 22 148 482 82 443 1.40e-41 154
MS.gene024430.t1 AT4G30040 30.986 355 216 12 139 476 85 427 1.61e-41 154
MS.gene024430.t1 AT2G28030 31.356 354 205 12 139 481 61 387 4.66e-41 151
MS.gene024430.t1 AT4G30030 31.180 356 220 15 139 482 78 420 2.30e-40 150
MS.gene024430.t1 AT1G66180 32.687 361 207 19 145 481 78 426 1.81e-39 148
MS.gene024430.t1 AT3G52500 30.804 448 249 19 86 481 29 467 1.83e-39 149
MS.gene024430.t1 AT5G37540 32.020 406 230 20 107 482 50 439 5.14e-39 147
MS.gene024430.t1 AT2G28220 30.641 359 205 13 139 481 67 397 1.94e-38 144
MS.gene024430.t1 AT2G28225 30.641 359 205 14 139 481 67 397 1.49e-37 142
MS.gene024430.t1 AT5G45120 28.398 412 232 17 128 481 72 478 8.49e-36 139
MS.gene024430.t1 AT5G36260 29.223 373 221 17 137 481 76 433 5.45e-33 131
MS.gene024430.t1 AT4G16563 32.581 399 189 17 156 481 100 491 2.12e-31 127
MS.gene024430.t1 AT5G22850 29.301 372 226 14 137 481 79 440 2.85e-31 126
MS.gene024430.t1 AT5G43100 26.829 369 223 14 136 481 73 417 1.12e-30 125
MS.gene024430.t1 AT5G43100 26.829 369 223 14 136 481 73 417 1.23e-30 124
MS.gene024430.t1 AT2G23945 26.906 446 278 22 66 481 21 448 8.68e-30 121
MS.gene024430.t1 AT3G02740 26.714 423 257 18 93 481 36 439 1.89e-28 118
MS.gene024430.t1 AT4G33490 28.232 379 215 18 137 482 58 412 5.67e-28 115
MS.gene024430.t1 AT3G02740 26.542 373 226 15 139 481 10 364 3.42e-27 113
MS.gene024430.t1 AT2G36670 27.568 370 233 13 137 481 98 457 1.75e-26 112
MS.gene024430.t1 AT2G36670 27.446 368 232 13 139 481 105 462 4.62e-26 111
MS.gene024430.t1 AT2G36670 27.717 368 231 14 139 481 34 391 5.07e-26 110
MS.gene024430.t1 AT2G36670 27.717 368 231 14 139 481 34 391 5.07e-26 110
MS.gene024430.t1 AT4G12920 25.128 390 234 12 118 482 32 388 2.26e-24 105
MS.gene024430.t1 AT2G17760 28.378 370 214 19 139 481 104 449 2.94e-24 106
MS.gene024430.t1 AT1G05840 25.397 378 232 16 137 481 78 438 7.24e-24 104
MS.gene024430.t1 AT1G65240 25.600 375 229 16 137 481 72 426 2.62e-23 102
MS.gene024430.t1 AT3G51340 25.056 443 272 19 74 481 30 447 6.19e-23 102
MS.gene024430.t1 AT3G50050 25.381 394 237 14 114 481 74 436 8.67e-23 102
MS.gene024430.t1 AT4G33490 28.613 346 193 17 137 452 55 376 1.54e-22 99.8
MS.gene024430.t1 AT3G51330 26.549 452 263 21 74 482 29 454 2.17e-21 97.1
MS.gene024430.t1 AT1G08210 27.642 369 233 14 137 481 130 488 2.83e-21 97.4
MS.gene024430.t1 AT1G08210 27.642 369 233 14 137 481 116 474 2.84e-21 97.1
MS.gene024430.t1 AT3G51330 26.608 451 262 21 74 481 29 453 3.06e-21 97.1
MS.gene024430.t1 AT3G25700 35.260 173 92 7 109 262 48 219 3.43e-21 95.1
MS.gene024430.t1 AT3G25700 37.037 135 77 6 353 481 215 347 3.85e-14 73.9
MS.gene024430.t1 AT1G08210 28.108 370 230 15 137 481 82 440 3.98e-21 96.7
MS.gene024430.t1 AT3G51350 25.272 368 233 13 139 481 102 452 3.95e-20 93.6
MS.gene024430.t1 AT3G51340 25.648 386 231 16 74 426 30 392 7.59e-20 92.0
MS.gene024430.t1 AT3G51340 24.835 455 270 21 74 481 30 459 1.73e-19 91.7
MS.gene024430.t1 AT3G51340 25.824 364 216 15 74 404 30 372 1.46e-18 87.8
MS.gene024430.t1 AT3G51330 26.995 426 242 21 74 456 29 428 3.03e-18 87.4
MS.gene024430.t1 AT3G42550 25.691 362 206 14 136 481 75 389 6.40e-17 83.2
MS.gene024430.t1 AT1G08210 27.711 332 207 13 137 445 82 403 7.47e-17 83.6
MS.gene024430.t1 AT3G51360 25.806 341 195 15 73 384 31 342 1.96e-13 72.0
MS.gene024430.t1 AT1G03220 24.242 396 228 19 134 477 39 414 1.81e-11 66.6

Find 141 sgRNAs with CRISPR-Local

Find 159 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGGAGAGTGATTCTTCTTT+TGG 0.170893 7.2:-839455 None:intergenic
CGCGTGGCGCGTGTGGCTTT+AGG 0.227012 7.2:+839971 MS.gene024430:CDS
TATTCAGCAGCAAGGGTTTC+GGG 0.242630 7.2:+840621 MS.gene024430:CDS
GATAAAGATTCTTCTGATTC+TGG 0.246841 7.2:-839413 None:intergenic
GTTGGTGCTGCTGGTTTATT+AGG 0.281772 7.2:+840022 MS.gene024430:CDS
CACGCGCCACGCGCGTCTTT+CGG 0.291329 7.2:-839961 None:intergenic
TGAAGCCAGTAGCGGATCTA+TGG 0.300042 7.2:-839601 None:intergenic
CTGCTTGCGAATAACATTTC+CGG 0.301592 7.2:-839760 None:intergenic
TTCTATTACGTTGGACTTCT+CGG 0.303284 7.2:+840226 MS.gene024430:CDS
GCGTGGCGCGTGTGGCTTTA+GGG 0.318817 7.2:+839972 MS.gene024430:CDS
GATACTTGCTTTGATTTATC+TGG 0.322152 7.2:+840445 MS.gene024430:CDS
TTGCACTGAGAGATGCATTT+AGG 0.324139 7.2:+840377 MS.gene024430:CDS
GGCGGAGTTATCATTGATTC+AGG 0.331058 7.2:+840319 MS.gene024430:CDS
AGGAGCACCGCATGGGATTC+CGG 0.333198 7.2:-839819 None:intergenic
TGACTCTGGCAGCATCTCTT+TGG 0.333372 7.2:-839544 None:intergenic
ATATTCAGCAGCAAGGGTTT+CGG 0.334919 7.2:+840620 MS.gene024430:CDS
GATTGAACCGGCGACCGGTT+TGG 0.338038 7.2:-840075 None:intergenic
ACCCTTCTACAACACTTTCA+TGG 0.345759 7.2:+839390 MS.gene024430:CDS
TAATAGAAAGTATCGAGTTT+AGG 0.348580 7.2:-840211 None:intergenic
GGCACAGAATTACTTGATTC+CGG 0.349446 7.2:+840531 MS.gene024430:CDS
GGCGATGGGTCTTTCACTTT+CGG 0.355522 7.2:+839911 MS.gene024430:CDS
AATGATAACTCCGCCGTTTC+CGG 0.356163 7.2:-840311 None:intergenic
GGCCATGAAAGTGTTGTAGA+AGG 0.364631 7.2:-839392 None:intergenic
AGTTTGAGTATGTGTGTTAG+TGG 0.374005 7.2:-839333 None:intergenic
CATGCGGTGCTCCTCTTTGC+CGG 0.374955 7.2:+839828 MS.gene024430:CDS
TTGAGAAAGTCCGGAGACTA+TGG 0.378424 7.2:-839630 None:intergenic
CTCGATACTTTCTATTACGT+TGG 0.395207 7.2:+840217 MS.gene024430:CDS
CGTAGGAACGTGACTTTGTT+GGG 0.396292 7.2:-839796 None:intergenic
ATCTTGCGAGCTCGCGGGTC+GGG 0.397716 7.2:+840653 MS.gene024430:CDS
AGGAGATGGCTAATAATAAC+AGG 0.397773 7.2:-839283 None:intergenic
TAGCCACACCACGTCACTTC+CGG 0.407176 7.2:-839723 None:intergenic
AGGTGCTGATGTGTCCCTTC+CGG 0.412328 7.2:+840510 MS.gene024430:CDS
TAATCTCATTCACACCCTTT+CGG 0.415131 7.2:-840682 None:intergenic
AAGAGAATTTCTGATTGAAC+CGG 0.429358 7.2:-840087 None:intergenic
ATGTTATTCGCAAGCAGATC+CGG 0.430664 7.2:+839766 MS.gene024430:CDS
ATGAGTGGTTTGTCCATCAT+TGG 0.431680 7.2:+840595 MS.gene024430:CDS
GCTGCTGGTTTATTAGGTCT+TGG 0.436699 7.2:+840028 MS.gene024430:CDS
TATTTCACTCGCATCGGCGT+TGG 0.442972 7.2:+839665 MS.gene024430:CDS
GAGGCGGAGACGCCACGAAC+TGG 0.443110 7.2:-840268 None:intergenic
TGTCAGTATCAAGTTTCTTA+CGG 0.448845 7.2:+839890 MS.gene024430:CDS
TGTAAGCAGGTCGAGTCAAT+CGG 0.453067 7.2:-840354 None:intergenic
GAAATTCTCTTATTGTCTTG+TGG 0.459018 7.2:+840099 MS.gene024430:CDS
CTGCTGAATATTACCAATGA+TGG 0.459225 7.2:-840608 None:intergenic
GCGTAGGAACGTGACTTTGT+TGG 0.461415 7.2:-839797 None:intergenic
TGGGTCTTCGGATTCGGGTA+TGG 0.461666 7.2:-839435 None:intergenic
TTCCGGTCCAAACCGGTCGC+CGG 0.464037 7.2:+840068 MS.gene024430:CDS
TGCCGGCGACTCGACACTGC+TGG 0.466483 7.2:+839845 MS.gene024430:CDS
TCTATTACGTTGGACTTCTC+GGG 0.468916 7.2:+840227 MS.gene024430:CDS
TCTCTTATTGTCTTGTGGAC+CGG 0.472788 7.2:+840104 MS.gene024430:CDS
AACCGGCGACCGGTTTGGAC+CGG 0.474663 7.2:-840070 None:intergenic
AAACTCGACACCGCCGGAAA+CGG 0.478325 7.2:+840298 MS.gene024430:CDS
AGTTTCTGCTTTGCTTTCGC+CGG 0.481212 7.2:+840568 MS.gene024430:CDS
TAATGAGAGTGTGAAGGAGA+AGG 0.487577 7.2:-839303 None:intergenic
GGACAAACCACTCATCGTTC+CGG 0.488760 7.2:-840587 None:intergenic
TTTCTGATTGAACCGGCGAC+CGG 0.493839 7.2:-840080 None:intergenic
GCCGCTGCCTTGAGAAAGTC+CGG 0.495381 7.2:-839639 None:intergenic
GAAGCCAGTAGCGGATCTAT+GGG 0.498743 7.2:-839600 None:intergenic
GTCGGTGGTGCTCCAGTTCG+TGG 0.500304 7.2:+840256 MS.gene024430:CDS
ATCAAGTTTCTTACGGCGAT+GGG 0.503051 7.2:+839897 MS.gene024430:CDS
GAAAGTGTTGTAGAAGGGTT+GGG 0.503412 7.2:-839386 None:intergenic
TGAGATGGAAGAGTTGTTGT+GGG 0.508451 7.2:-839517 None:intergenic
TGAAAGTGTTGTAGAAGGGT+TGG 0.509537 7.2:-839387 None:intergenic
AAAGACGCGCGTGGCGCGTG+TGG 0.510956 7.2:+839964 MS.gene024430:CDS
TATCAAGTTTCTTACGGCGA+TGG 0.511342 7.2:+839896 MS.gene024430:CDS
CATCTCTTTGGAGTCTGAGA+TGG 0.515518 7.2:-839532 None:intergenic
AACCAGCAGTGTCGAGTCGC+CGG 0.516796 7.2:-839847 None:intergenic
CGTCCCCATAGATCCGCTAC+TGG 0.516821 7.2:+839596 MS.gene024430:CDS
TCTCTCTCTCCAACAATGGA+AGG 0.518461 7.2:+839236 None:intergenic
CTGAGAGATGCATTTAGGCT+TGG 0.527744 7.2:+840382 MS.gene024430:CDS
TTGAGTATGTGTGTTAGTGG+TGG 0.527925 7.2:-839330 None:intergenic
TTTGAGAAGTGGAGTGAACC+GGG 0.528011 7.2:-840185 None:intergenic
ATACTGACAAACCTTGCTCT+TGG 0.528974 7.2:-839876 None:intergenic
CTCTTCAAACTCGACACCGC+CGG 0.530466 7.2:+840292 MS.gene024430:CDS
TGGTGCTACGCATCTGAAGA+AGG 0.532453 7.2:+840402 MS.gene024430:CDS
GAGTGTGAAGGAGAAGGAGA+TGG 0.533697 7.2:-839297 None:intergenic
TTCAGCAGCTCCATAGTCTC+CGG 0.534475 7.2:+839620 MS.gene024430:CDS
CTAATAATAACAGGAAGAGA+AGG 0.539960 7.2:-839274 None:intergenic
GCTTTCGCCGGAACGATGAG+TGG 0.540100 7.2:+840580 MS.gene024430:CDS
GGGTCGGGTTTGCACCGAAA+GGG 0.540863 7.2:+840668 MS.gene024430:CDS
GGCAAAGAGGAGCACCGCAT+GGG 0.541095 7.2:-839826 None:intergenic
TCTCTCAGTGCAATGTAAGC+AGG 0.541916 7.2:-840367 None:intergenic
CGGGTCGGGTTTGCACCGAA+AGG 0.542657 7.2:+840667 MS.gene024430:CDS
GCGCGTGTGGCTTTAGGGTG+TGG 0.542668 7.2:+839977 MS.gene024430:CDS
CTCGACACCGCCGGAAACGG+CGG 0.545168 7.2:+840301 MS.gene024430:CDS
GATCTTGCGAGCTCGCGGGT+CGG 0.545739 7.2:+840652 MS.gene024430:CDS
CGGCTGTTTCTCGAACCGCC+CGG 0.547042 7.2:+840167 MS.gene024430:CDS
CTGAGATGGAAGAGTTGTTG+TGG 0.551222 7.2:-839518 None:intergenic
CGGCAAAGAGGAGCACCGCA+TGG 0.553154 7.2:-839827 None:intergenic
ACCATGAAAACATACCTAGC+TGG 0.553972 7.2:-839692 None:intergenic
ATCTGGTCTGACGGAAGTGA+AGG 0.555136 7.2:+840462 MS.gene024430:CDS
GTAAGCAGGTCGAGTCAATC+GGG 0.555188 7.2:-840353 None:intergenic
TGTTGCGAAGGATTTGACTC+TGG 0.555494 7.2:-839558 None:intergenic
TGCGAATAACATTTCCGGCA+TGG 0.557017 7.2:-839755 None:intergenic
CTTTGATTTATCTGGTCTGA+CGG 0.557950 7.2:+840453 MS.gene024430:CDS
GGCTACAATGTGCGCCATGC+CGG 0.558061 7.2:+839741 MS.gene024430:CDS
TTGGTAATATTCAGCAGCAA+GGG 0.558689 7.2:+840614 MS.gene024430:CDS
GGAATCAAGTAATTCTGTGC+CGG 0.577242 7.2:-840529 None:intergenic
ATTGGTAATATTCAGCAGCA+AGG 0.580766 7.2:+840613 MS.gene024430:CDS
GGACTTCTCGGGATCAGTGT+CGG 0.581085 7.2:+840238 MS.gene024430:CDS
GTGTCGAGTCGCCGGCAAAG+AGG 0.582989 7.2:-839839 None:intergenic
TCGGAACGTGAGTGTTTCAG+TGG 0.583381 7.2:-839942 None:intergenic
GGTTTATTAGGTCTTGGTCG+TGG 0.585085 7.2:+840034 MS.gene024430:CDS
GGCGAATATTTCACTCGCAT+CGG 0.585714 7.2:+839659 MS.gene024430:CDS
ACCGCATGGGATTCCGGCGT+AGG 0.586025 7.2:-839813 None:intergenic
TTATGATCTTGCGAGCTCGC+GGG 0.587097 7.2:+840648 MS.gene024430:CDS
TTTGTTGAGAGCTGTTGCGA+AGG 0.589319 7.2:-839570 None:intergenic
TCAAGTAATTCTGTGCCGGA+AGG 0.590991 7.2:-840525 None:intergenic
ATAGTCTCCGGACTTTCTCA+AGG 0.594667 7.2:+839632 MS.gene024430:CDS
CTCTCTCTCCAACAATGGAA+GGG 0.601837 7.2:+839237 None:intergenic
TGAAAATGAAGCACTAATGT+CGG 0.602965 7.2:-840487 None:intergenic
GTTATGATCTTGCGAGCTCG+CGG 0.603166 7.2:+840647 MS.gene024430:CDS
GAGATGGAAGAGTTGTTGTG+GGG 0.607914 7.2:-839516 None:intergenic
ACAAAGTCACGTTCCTACGC+CGG 0.611027 7.2:+839800 MS.gene024430:CDS
AAACTCCCACTGTTGTCCAC+CGG 0.611488 7.2:-840550 None:intergenic
TAATAATAACAGGAAGAGAA+GGG 0.612584 7.2:-839273 None:intergenic
TCGGCGTTGGAACTCCAGCT+AGG 0.613832 7.2:+839678 MS.gene024430:CDS
TGGTTGCAACACCAAGAGCA+AGG 0.613988 7.2:+839865 MS.gene024430:CDS
TCCGGACTTTCTCAAGGCAG+CGG 0.615778 7.2:+839638 MS.gene024430:CDS
GATAACTCCGCCGTTTCCGG+CGG 0.625472 7.2:-840308 None:intergenic
TTGATTCCGGTGGACAACAG+TGG 0.625730 7.2:+840544 MS.gene024430:CDS
TACGCATCTGAAGAAGGCGC+CGG 0.628413 7.2:+840408 MS.gene024430:CDS
ACACCGGAAGTGACGTGGTG+TGG 0.630163 7.2:+839720 MS.gene024430:CDS
CTTCTCGGGATCAGTGTCGG+TGG 0.631380 7.2:+840241 MS.gene024430:CDS
GTCTATGTGGTGTAGCTGAA+GGG 0.633304 7.2:-839474 None:intergenic
TGATTCCGGTGGACAACAGT+GGG 0.634457 7.2:+840545 MS.gene024430:CDS
GTATCGAACAACGAAAACTC+CGG 0.636421 7.2:-840427 None:intergenic
CAAGTAATTCTGTGCCGGAA+GGG 0.643698 7.2:-840524 None:intergenic
CACGTTCCGAAAGACGCGCG+TGG 0.647276 7.2:+839955 MS.gene024430:CDS
TGTCTATGTGGTGTAGCTGA+AGG 0.647590 7.2:-839475 None:intergenic
TCTCGACACCGGAAGTGACG+TGG 0.648988 7.2:+839715 MS.gene024430:CDS
GCCATGAAAGTGTTGTAGAA+GGG 0.671272 7.2:-839391 None:intergenic
GGAGCTGCTGAAGCCAGTAG+CGG 0.671965 7.2:-839609 None:intergenic
ACAGAATTACTTGATTCCGG+TGG 0.679406 7.2:+840534 MS.gene024430:CDS
GGTGTCGAGTTTGAAGAGCG+AGG 0.684854 7.2:-840287 None:intergenic
CGGAGGAGAGAGTGTCTATG+TGG 0.693842 7.2:-839487 None:intergenic
TCCTACGCCGGAATCCCATG+CGG 0.708485 7.2:+839812 MS.gene024430:CDS
GGTTGTTAATGAGAGTGTGA+AGG 0.708906 7.2:-839309 None:intergenic
AAGCCAGTAGCGGATCTATG+GGG 0.720794 7.2:-839599 None:intergenic
GGGTGTGGACATGATAACGA+AGG 0.721683 7.2:+839992 MS.gene024430:CDS
GTCGAGTTTGAAGAGCGAGG+CGG 0.728421 7.2:-840284 None:intergenic
GAGAAGTGGAGTGAACCGGG+CGG 0.786995 7.2:-840182 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! TAATAATAACAGGAAGAGAA+GGG - chr7.2:839276-839295 None:intergenic 25.0%
!!! TAATAGAAAGTATCGAGTTT+AGG - chr7.2:840214-840233 None:intergenic 25.0%
AAGAGAATTTCTGATTGAAC+CGG - chr7.2:840090-840109 None:intergenic 30.0%
CTAATAATAACAGGAAGAGA+AGG - chr7.2:839277-839296 None:intergenic 30.0%
GAAATTCTCTTATTGTCTTG+TGG + chr7.2:840099-840118 MS.gene024430:CDS 30.0%
GATAAAGATTCTTCTGATTC+TGG - chr7.2:839416-839435 None:intergenic 30.0%
TGTCAGTATCAAGTTTCTTA+CGG + chr7.2:839890-839909 MS.gene024430:CDS 30.0%
! ACATTAGTGCTTCATTTTCA+AGG + chr7.2:840490-840509 MS.gene024430:CDS 30.0%
! GATACTTGCTTTGATTTATC+TGG + chr7.2:840445-840464 MS.gene024430:CDS 30.0%
! TGAAAATGAAGCACTAATGT+CGG - chr7.2:840490-840509 None:intergenic 30.0%
!! AGTTTAGGATTTTTGAGAAG+TGG - chr7.2:840199-840218 None:intergenic 30.0%
AGGAGATGGCTAATAATAAC+AGG - chr7.2:839286-839305 None:intergenic 35.0%
AGTTTGAGTATGTGTGTTAG+TGG - chr7.2:839336-839355 None:intergenic 35.0%
CTCGATACTTTCTATTACGT+TGG + chr7.2:840217-840236 MS.gene024430:CDS 35.0%
CTGCTGAATATTACCAATGA+TGG - chr7.2:840611-840630 None:intergenic 35.0%
TTCTATTACGTTGGACTTCT+CGG + chr7.2:840226-840245 MS.gene024430:CDS 35.0%
! ATTGGTAATATTCAGCAGCA+AGG + chr7.2:840613-840632 MS.gene024430:CDS 35.0%
! CTTTGATTTATCTGGTCTGA+CGG + chr7.2:840453-840472 MS.gene024430:CDS 35.0%
! TCGTGGTAGATTATCTTTTC+CGG + chr7.2:840051-840070 MS.gene024430:CDS 35.0%
! TTGGTAATATTCAGCAGCAA+GGG + chr7.2:840614-840633 MS.gene024430:CDS 35.0%
!! TGATTCTTCTTTTGGGTCTT+CGG - chr7.2:839450-839469 None:intergenic 35.0%
ACAGAATTACTTGATTCCGG+TGG + chr7.2:840534-840553 MS.gene024430:CDS 40.0%
ACCATGAAAACATACCTAGC+TGG - chr7.2:839695-839714 None:intergenic 40.0%
ACCCTTCTACAACACTTTCA+TGG + chr7.2:839390-839409 MS.gene024430:CDS 40.0%
ATACTGACAAACCTTGCTCT+TGG - chr7.2:839879-839898 None:intergenic 40.0%
ATATTCAGCAGCAAGGGTTT+CGG + chr7.2:840620-840639 MS.gene024430:CDS 40.0%
ATCAAGTTTCTTACGGCGAT+GGG + chr7.2:839897-839916 MS.gene024430:CDS 40.0%
ATGTTATTCGCAAGCAGATC+CGG + chr7.2:839766-839785 MS.gene024430:CDS 40.0%
CTGCTTGCGAATAACATTTC+CGG - chr7.2:839763-839782 None:intergenic 40.0%
GACTTTGTTGGGTCAAAAAC+CGG - chr7.2:839788-839807 None:intergenic 40.0%
GGAATCAAGTAATTCTGTGC+CGG - chr7.2:840532-840551 None:intergenic 40.0%
GGCACAGAATTACTTGATTC+CGG + chr7.2:840531-840550 MS.gene024430:CDS 40.0%
GTATCGAACAACGAAAACTC+CGG - chr7.2:840430-840449 None:intergenic 40.0%
TATCAAGTTTCTTACGGCGA+TGG + chr7.2:839896-839915 MS.gene024430:CDS 40.0%
TCACCAAAAACAACGGAAGA+CGG - chr7.2:840145-840164 None:intergenic 40.0%
TCTATTACGTTGGACTTCTC+GGG + chr7.2:840227-840246 MS.gene024430:CDS 40.0%
TCTCTTATTGTCTTGTGGAC+CGG + chr7.2:840104-840123 MS.gene024430:CDS 40.0%
TGAGATGGAAGAGTTGTTGT+GGG - chr7.2:839520-839539 None:intergenic 40.0%
TTGAGTATGTGTGTTAGTGG+TGG - chr7.2:839333-839352 None:intergenic 40.0%
TTGCACTGAGAGATGCATTT+AGG + chr7.2:840377-840396 MS.gene024430:CDS 40.0%
! AGGGAGAGTGATTCTTCTTT+TGG - chr7.2:839458-839477 None:intergenic 40.0%
! ATGAGTGGTTTGTCCATCAT+TGG + chr7.2:840595-840614 MS.gene024430:CDS 40.0%
! GATAACGAAGGTCTTTTCGT+TGG + chr7.2:840004-840023 MS.gene024430:CDS 40.0%
! GGGAGAGTGATTCTTCTTTT+GGG - chr7.2:839457-839476 None:intergenic 40.0%
! GGTTGTTAATGAGAGTGTGA+AGG - chr7.2:839312-839331 None:intergenic 40.0%
! TAATGAGAGTGTGAAGGAGA+AGG - chr7.2:839306-839325 None:intergenic 40.0%
! TCCAGCTAGGTATGTTTTCA+TGG + chr7.2:839691-839710 MS.gene024430:CDS 40.0%
! TTATCTTTTCCGGTCCAAAC+CGG + chr7.2:840061-840080 MS.gene024430:CDS 40.0%
!! AAACCGTCTTCCGTTGTTTT+TGG + chr7.2:840139-840158 MS.gene024430:CDS 40.0%
!! GAAAGTGTTGTAGAAGGGTT+GGG - chr7.2:839389-839408 None:intergenic 40.0%
!! GCCATGAAAGTGTTGTAGAA+GGG - chr7.2:839394-839413 None:intergenic 40.0%
!! TGAAAGTGTTGTAGAAGGGT+TGG - chr7.2:839390-839409 None:intergenic 40.0%
!! TTCTTTTGGGTCTTCGGATT+CGG - chr7.2:839444-839463 None:intergenic 40.0%
!! TTTTGAGAAGTGGAGTGAAC+CGG - chr7.2:840189-840208 None:intergenic 40.0%
!!! TTCCGTTGTTTTTGGTGACT+CGG + chr7.2:840147-840166 MS.gene024430:CDS 40.0%
AATGATAACTCCGCCGTTTC+CGG - chr7.2:840314-840333 None:intergenic 45.0%
AGCCGAGTCACCAAAAACAA+CGG - chr7.2:840152-840171 None:intergenic 45.0%
AGTTTCTGCTTTGCTTTCGC+CGG + chr7.2:840568-840587 MS.gene024430:CDS 45.0%
ATAGTCTCCGGACTTTCTCA+AGG + chr7.2:839632-839651 MS.gene024430:CDS 45.0%
CAAGTAATTCTGTGCCGGAA+GGG - chr7.2:840527-840546 None:intergenic 45.0%
CGTAGGAACGTGACTTTGTT+GGG - chr7.2:839799-839818 None:intergenic 45.0%
CTGAGAGATGCATTTAGGCT+TGG + chr7.2:840382-840401 MS.gene024430:CDS 45.0%
CTGAGATGGAAGAGTTGTTG+TGG - chr7.2:839521-839540 None:intergenic 45.0%
GAGATGGAAGAGTTGTTGTG+GGG - chr7.2:839519-839538 None:intergenic 45.0%
GGCGAATATTTCACTCGCAT+CGG + chr7.2:839659-839678 MS.gene024430:CDS 45.0%
GGTTTATTAGGTCTTGGTCG+TGG + chr7.2:840034-840053 MS.gene024430:CDS 45.0%
GTCTATGTGGTGTAGCTGAA+GGG - chr7.2:839477-839496 None:intergenic 45.0%
TATTCAGCAGCAAGGGTTTC+GGG + chr7.2:840621-840640 MS.gene024430:CDS 45.0%
TCAAGTAATTCTGTGCCGGA+AGG - chr7.2:840528-840547 None:intergenic 45.0%
TCTCTCAGTGCAATGTAAGC+AGG - chr7.2:840370-840389 None:intergenic 45.0%
TGCGAATAACATTTCCGGCA+TGG - chr7.2:839758-839777 None:intergenic 45.0%
TGTAAGCAGGTCGAGTCAAT+CGG - chr7.2:840357-840376 None:intergenic 45.0%
TGTCTATGTGGTGTAGCTGA+AGG - chr7.2:839478-839497 None:intergenic 45.0%
TGTTGCGAAGGATTTGACTC+TGG - chr7.2:839561-839580 None:intergenic 45.0%
TTGAGAAAGTCCGGAGACTA+TGG - chr7.2:839633-839652 None:intergenic 45.0%
TTTGAGAAGTGGAGTGAACC+GGG - chr7.2:840188-840207 None:intergenic 45.0%
TTTGTTGAGAGCTGTTGCGA+AGG - chr7.2:839573-839592 None:intergenic 45.0%
! GTTTTCATGGTTCTCGACAC+CGG + chr7.2:839704-839723 MS.gene024430:CDS 45.0%
!! ACGGTTTTGATGTAGCAGAC+CGG - chr7.2:840126-840145 None:intergenic 45.0%
!! CATCTCTTTGGAGTCTGAGA+TGG - chr7.2:839535-839554 None:intergenic 45.0%
!! GAGTTGTTGTGGGGTTTTGT+CGG - chr7.2:839510-839529 None:intergenic 45.0%
!! GCTGCTGGTTTATTAGGTCT+TGG + chr7.2:840028-840047 MS.gene024430:CDS 45.0%
!! GGCCATGAAAGTGTTGTAGA+AGG - chr7.2:839395-839414 None:intergenic 45.0%
!! GGCGGAGTTATCATTGATTC+AGG + chr7.2:840319-840338 MS.gene024430:CDS 45.0%
!! GTTGGTGCTGCTGGTTTATT+AGG + chr7.2:840022-840041 MS.gene024430:CDS 45.0%
!! TCTTTTGGGTCTTCGGATTC+GGG - chr7.2:839443-839462 None:intergenic 45.0%
AAACTCCCACTGTTGTCCAC+CGG - chr7.2:840553-840572 None:intergenic 50.0%
ACAAAGTCACGTTCCTACGC+CGG + chr7.2:839800-839819 MS.gene024430:CDS 50.0%
ATCTGGTCTGACGGAAGTGA+AGG + chr7.2:840462-840481 MS.gene024430:CDS 50.0%
GAGTGTGAAGGAGAAGGAGA+TGG - chr7.2:839300-839319 None:intergenic 50.0%
GCGTAGGAACGTGACTTTGT+TGG - chr7.2:839800-839819 None:intergenic 50.0%
GGACAAACCACTCATCGTTC+CGG - chr7.2:840590-840609 None:intergenic 50.0%
GGCGATGGGTCTTTCACTTT+CGG + chr7.2:839911-839930 MS.gene024430:CDS 50.0%
GTAAGCAGGTCGAGTCAATC+GGG - chr7.2:840356-840375 None:intergenic 50.0%
GTTATGATCTTGCGAGCTCG+CGG + chr7.2:840647-840666 MS.gene024430:CDS 50.0%
TCGGAACGTGAGTGTTTCAG+TGG - chr7.2:839945-839964 None:intergenic 50.0%
TGACTCTGGCAGCATCTCTT+TGG - chr7.2:839547-839566 None:intergenic 50.0%
TGATTCCGGTGGACAACAGT+GGG + chr7.2:840545-840564 MS.gene024430:CDS 50.0%
TGGTTGCAACACCAAGAGCA+AGG + chr7.2:839865-839884 MS.gene024430:CDS 50.0%
TTATGATCTTGCGAGCTCGC+GGG + chr7.2:840648-840667 MS.gene024430:CDS 50.0%
TTCAGCAGCTCCATAGTCTC+CGG + chr7.2:839620-839639 MS.gene024430:CDS 50.0%
TTGATTCCGGTGGACAACAG+TGG + chr7.2:840544-840563 MS.gene024430:CDS 50.0%
TTTCTGATTGAACCGGCGAC+CGG - chr7.2:840083-840102 None:intergenic 50.0%
! GGGTGTGGACATGATAACGA+AGG + chr7.2:839992-840011 MS.gene024430:CDS 50.0%
! TATTTCACTCGCATCGGCGT+TGG + chr7.2:839665-839684 MS.gene024430:CDS 50.0%
!! AAGCCAGTAGCGGATCTATG+GGG - chr7.2:839602-839621 None:intergenic 50.0%
!! GAAGCCAGTAGCGGATCTAT+GGG - chr7.2:839603-839622 None:intergenic 50.0%
!! TGAAGCCAGTAGCGGATCTA+TGG - chr7.2:839604-839623 None:intergenic 50.0%
!! TGGTGCTACGCATCTGAAGA+AGG + chr7.2:840402-840421 MS.gene024430:CDS 50.0%
!! TTGTTGTGGGGTTTTGTCGG+AGG - chr7.2:839507-839526 None:intergenic 50.0%
AAACTCGACACCGCCGGAAA+CGG + chr7.2:840298-840317 MS.gene024430:CDS 55.0%
CTCTTCAAACTCGACACCGC+CGG + chr7.2:840292-840311 MS.gene024430:CDS 55.0%
GGACTTCTCGGGATCAGTGT+CGG + chr7.2:840238-840257 MS.gene024430:CDS 55.0%
GTCGAGTTTGAAGAGCGAGG+CGG - chr7.2:840287-840306 None:intergenic 55.0%
TAGCCACACCACGTCACTTC+CGG - chr7.2:839726-839745 None:intergenic 55.0%
TCCGGACTTTCTCAAGGCAG+CGG + chr7.2:839638-839657 MS.gene024430:CDS 55.0%
TGGGTCTTCGGATTCGGGTA+TGG - chr7.2:839438-839457 None:intergenic 55.0%
! GGTGTCGAGTTTGAAGAGCG+AGG - chr7.2:840290-840309 None:intergenic 55.0%
! TACGCATCTGAAGAAGGCGC+CGG + chr7.2:840408-840427 MS.gene024430:CDS 55.0%
!! AGGTGCTGATGTGTCCCTTC+CGG + chr7.2:840510-840529 MS.gene024430:CDS 55.0%
!! CGGAGGAGAGAGTGTCTATG+TGG - chr7.2:839490-839509 None:intergenic 55.0%
!!! GGTCTTTTCGTTGGTGCTGC+TGG + chr7.2:840013-840032 MS.gene024430:CDS 55.0%
ACACCGGAAGTGACGTGGTG+TGG + chr7.2:839720-839739 MS.gene024430:CDS 60.0%
CATGCGGTGCTCCTCTTTGC+CGG + chr7.2:839828-839847 MS.gene024430:CDS 60.0%
CGTCCCCATAGATCCGCTAC+TGG + chr7.2:839596-839615 MS.gene024430:CDS 60.0%
GAGAAGTGGAGTGAACCGGG+CGG - chr7.2:840185-840204 None:intergenic 60.0%
GATAACTCCGCCGTTTCCGG+CGG - chr7.2:840311-840330 None:intergenic 60.0%
GATTGAACCGGCGACCGGTT+TGG - chr7.2:840078-840097 None:intergenic 60.0%
GCCGCTGCCTTGAGAAAGTC+CGG - chr7.2:839642-839661 None:intergenic 60.0%
GCTTTCGCCGGAACGATGAG+TGG + chr7.2:840580-840599 MS.gene024430:CDS 60.0%
GGAGCTGCTGAAGCCAGTAG+CGG - chr7.2:839612-839631 None:intergenic 60.0%
GGCTACAATGTGCGCCATGC+CGG + chr7.2:839741-839760 MS.gene024430:CDS 60.0%
GGGTCGGGTTTGCACCGAAA+GGG + chr7.2:840668-840687 MS.gene024430:CDS 60.0%
TCCTACGCCGGAATCCCATG+CGG + chr7.2:839812-839831 MS.gene024430:CDS 60.0%
TCTCGACACCGGAAGTGACG+TGG + chr7.2:839715-839734 MS.gene024430:CDS 60.0%
! AACCAGCAGTGTCGAGTCGC+CGG - chr7.2:839850-839869 None:intergenic 60.0%
! CTTCTCGGGATCAGTGTCGG+TGG + chr7.2:840241-840260 MS.gene024430:CDS 60.0%
! TCGGCGTTGGAACTCCAGCT+AGG + chr7.2:839678-839697 MS.gene024430:CDS 60.0%
!! AGGAGCACCGCATGGGATTC+CGG - chr7.2:839822-839841 None:intergenic 60.0%
!! GGCAAAGAGGAGCACCGCAT+GGG - chr7.2:839829-839848 None:intergenic 60.0%
ACCGCATGGGATTCCGGCGT+AGG - chr7.2:839816-839835 None:intergenic 65.0%
ATCTTGCGAGCTCGCGGGTC+GGG + chr7.2:840653-840672 MS.gene024430:CDS 65.0%
CACGTTCCGAAAGACGCGCG+TGG + chr7.2:839955-839974 MS.gene024430:CDS 65.0%
CGGGTCGGGTTTGCACCGAA+AGG + chr7.2:840667-840686 MS.gene024430:CDS 65.0%
GATCTTGCGAGCTCGCGGGT+CGG + chr7.2:840652-840671 MS.gene024430:CDS 65.0%
GTCGGTGGTGCTCCAGTTCG+TGG + chr7.2:840256-840275 MS.gene024430:CDS 65.0%
GTGTCGAGTCGCCGGCAAAG+AGG - chr7.2:839842-839861 None:intergenic 65.0%
TTCCGGTCCAAACCGGTCGC+CGG + chr7.2:840068-840087 MS.gene024430:CDS 65.0%
! GCGTGGCGCGTGTGGCTTTA+GGG + chr7.2:839972-839991 MS.gene024430:CDS 65.0%
!! AACCGGCGACCGGTTTGGAC+CGG - chr7.2:840073-840092 None:intergenic 65.0%
!! CGGCAAAGAGGAGCACCGCA+TGG - chr7.2:839830-839849 None:intergenic 65.0%
!! CGGCTGTTTCTCGAACCGCC+CGG + chr7.2:840167-840186 MS.gene024430:CDS 65.0%
!! GCGCGTGTGGCTTTAGGGTG+TGG + chr7.2:839977-839996 MS.gene024430:CDS 65.0%
AAAGACGCGCGTGGCGCGTG+TGG + chr7.2:839964-839983 MS.gene024430:CDS 70.0%
CACGCGCCACGCGCGTCTTT+CGG - chr7.2:839964-839983 None:intergenic 70.0%
CGCGTGGCGCGTGTGGCTTT+AGG + chr7.2:839971-839990 MS.gene024430:CDS 70.0%
CTCGACACCGCCGGAAACGG+CGG + chr7.2:840301-840320 MS.gene024430:CDS 70.0%
GAGGCGGAGACGCCACGAAC+TGG - chr7.2:840271-840290 None:intergenic 70.0%
TGCCGGCGACTCGACACTGC+TGG + chr7.2:839845-839864 MS.gene024430:CDS 70.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 839251 840699 839251 ID=MS.gene024430
chr7.2 mRNA 839251 840699 839251 ID=MS.gene024430.t1;Parent=MS.gene024430
chr7.2 exon 839251 840699 839251 ID=MS.gene024430.t1.exon1;Parent=MS.gene024430.t1
chr7.2 CDS 839251 840699 839251 ID=cds.MS.gene024430.t1;Parent=MS.gene024430.t1
Gene Sequence

>MS.gene024430

ATGGAAGGGAACAATAACAAAACCCTTCTCTTCCTGTTATTATTAGCCATCTCCTTCTCCTTCACACTCTCATTAACAACCACCACTAACACACATACTCAAACTCAAACTCAAACTCTTTCTATTCGCTCTCTTCCCAACCCTTCTACAACACTTTCATGGCCAGAATCAGAAGAATCTTTATCCATACCCGAATCCGAAGACCCAAAAGAAGAATCACTCTCCCTTCAGCTACACCACATAGACACTCTCTCCTCCGACAAAACCCCACAACAACTCTTCCATCTCAGACTCCAAAGAGATGCTGCCAGAGTCAAATCCTTCGCAACAGCTCTCAACAAAACTCGTCCCCATAGATCCGCTACTGGCTTCAGCAGCTCCATAGTCTCCGGACTTTCTCAAGGCAGCGGCGAATATTTCACTCGCATCGGCGTTGGAACTCCAGCTAGGTATGTTTTCATGGTTCTCGACACCGGAAGTGACGTGGTGTGGCTACAATGTGCGCCATGCCGGAAATGTTATTCGCAAGCAGATCCGGTTTTTGACCCAACAAAGTCACGTTCCTACGCCGGAATCCCATGCGGTGCTCCTCTTTGCCGGCGACTCGACACTGCTGGTTGCAACACCAAGAGCAAGGTTTGTCAGTATCAAGTTTCTTACGGCGATGGGTCTTTCACTTTCGGTGATTTCTCCACTGAAACACTCACGTTCCGAAAGACGCGCGTGGCGCGTGTGGCTTTAGGGTGTGGACATGATAACGAAGGTCTTTTCGTTGGTGCTGCTGGTTTATTAGGTCTTGGTCGTGGTAGATTATCTTTTCCGGTCCAAACCGGTCGCCGGTTCAATCAGAAATTCTCTTATTGTCTTGTGGACCGGTCTGCTACATCAAAACCGTCTTCCGTTGTTTTTGGTGACTCGGCTGTTTCTCGAACCGCCCGGTTCACTCCACTTCTCAAAAATCCTAAACTCGATACTTTCTATTACGTTGGACTTCTCGGGATCAGTGTCGGTGGTGCTCCAGTTCGTGGCGTCTCCGCCTCGCTCTTCAAACTCGACACCGCCGGAAACGGCGGAGTTATCATTGATTCAGGAACTTCAGTAACCCGATTGACTCGACCTGCTTACATTGCACTGAGAGATGCATTTAGGCTTGGTGCTACGCATCTGAAGAAGGCGCCGGAGTTTTCGTTGTTCGATACTTGCTTTGATTTATCTGGTCTGACGGAAGTGAAGGTGCCGACATTAGTGCTTCATTTTCAAGGTGCTGATGTGTCCCTTCCGGCACAGAATTACTTGATTCCGGTGGACAACAGTGGGAGTTTCTGCTTTGCTTTCGCCGGAACGATGAGTGGTTTGTCCATCATTGGTAATATTCAGCAGCAAGGGTTTCGGGTCAGTTATGATCTTGCGAGCTCGCGGGTCGGGTTTGCACCGAAAGGGTGTGAATGA
Protein sequence

>MS.gene024430.t1

MEGNNNKTLLFLLLLAISFSFTLSLTTTTNTHTQTQTQTLSIRSLPNPSTTLSWPESEESLSIPESEDPKEESLSLQLHHIDTLSSDKTPQQLFHLRLQRDAARVKSFATALNKTRPHRSATGFSSSIVSGLSQGSGEYFTRIGVGTPARYVFMVLDTGSDVVWLQCAPCRKCYSQADPVFDPTKSRSYAGIPCGAPLCRRLDTAGCNTKSKVCQYQVSYGDGSFTFGDFSTETLTFRKTRVARVALGCGHDNEGLFVGAAGLLGLGRGRLSFPVQTGRRFNQKFSYCLVDRSATSKPSSVVFGDSAVSRTARFTPLLKNPKLDTFYYVGLLGISVGGAPVRGVSASLFKLDTAGNGGVIIDSGTSVTRLTRPAYIALRDAFRLGATHLKKAPEFSLFDTCFDLSGLTEVKVPTLVLHFQGADVSLPAQNYLIPVDNSGSFCFAFAGTMSGLSIIGNIQQQGFRVSYDLASSRVGFAPKGCE