Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02221.t1 | XP_003593314.1 | 97.4 | 1258 | 30 | 2 | 1 | 1255 | 1 | 1258 | 0.00E+00 | 2213.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02221.t1 | O60094 | 20.3 | 711 | 465 | 20 | 153 | 847 | 38 | 662 | 1.5e-21 | 107.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02221.t1 | G7ISA4 | 97.4 | 1258 | 30 | 2 | 1 | 1255 | 1 | 1258 | 0.0e+00 | 2213.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene05640 | MS.gene02221 | PPI |
MS.gene04079 | MS.gene02221 | PPI |
MS.gene08109 | MS.gene02221 | PPI |
MS.gene04418 | MS.gene02221 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02221.t1 | MTR_2g010110 | 97.377 | 1258 | 30 | 2 | 1 | 1255 | 1 | 1258 | 0.0 | 2498 |
MS.gene02221.t1 | MTR_2g086320 | 66.964 | 112 | 18 | 2 | 533 | 644 | 1 | 93 | 9.86e-36 | 131 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02221.t1 | AT5G64420 | 57.634 | 1251 | 499 | 8 | 33 | 1254 | 57 | 1305 | 0.0 | 1297 |
Find 257 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACTCCGCATCCTTTCATTAT+TGG | 0.108234 | 2.1:-73220425 | MS.gene02221:CDS |
TGCTGTATTTGGCTTTATTT+TGG | 0.128918 | 2.1:-73219713 | MS.gene02221:CDS |
TCTACAGACAGTTCCATTTA+TGG | 0.143885 | 2.1:-73224091 | MS.gene02221:CDS |
GCATTTGATGTGGGAGATTT+TGG | 0.150780 | 2.1:+73223030 | None:intergenic |
AAATCCAAAAGGAAGAATTT+TGG | 0.171453 | 2.1:+73219893 | None:intergenic |
AAAGGAAATAATGAAGTTTA+TGG | 0.180478 | 2.1:-73223127 | MS.gene02221:CDS |
TAAACTCGTAGTAGATTTAT+TGG | 0.186853 | 2.1:-73224934 | MS.gene02221:CDS |
ATAAATCTACTACGAGTTTA+AGG | 0.201598 | 2.1:+73224937 | None:intergenic |
TGGTAGTAGTTTGCCATAAA+TGG | 0.204218 | 2.1:+73224078 | None:intergenic |
GTTTCATATTGGTGTGTTTA+AGG | 0.207989 | 2.1:-73226188 | MS.gene02221:CDS |
CCCGCATCTGGATGTCTTGC+AGG | 0.208201 | 2.1:+73220745 | None:intergenic |
TTGCCCAAAATTCTTCCTTT+TGG | 0.208711 | 2.1:-73219897 | MS.gene02221:CDS |
TTGAGTTGGACGAGAAATTT+AGG | 0.244796 | 2.1:-73223056 | MS.gene02221:CDS |
CGGAGCTGGAAGTTCGGATT+TGG | 0.249234 | 2.1:+73226273 | None:intergenic |
TGCCTTGAACCGATATAAAA+TGG | 0.254681 | 2.1:-73219929 | MS.gene02221:CDS |
AATGAAGTTTATGGCTGTTC+AGG | 0.254880 | 2.1:-73223118 | MS.gene02221:CDS |
ATTCCTTTGTTTGAAGAAAC+TGG | 0.256200 | 2.1:-73219368 | MS.gene02221:CDS |
TGGATTGGCCATGCTGTATT+TGG | 0.268961 | 2.1:-73219724 | MS.gene02221:CDS |
TTCCTTCAGTTTCTCTCTTC+CGG | 0.279221 | 2.1:-73222861 | MS.gene02221:CDS |
GAGATTCAAGTGTCGATAAT+TGG | 0.285987 | 2.1:+73220031 | None:intergenic |
ACAGACGAAAATTCTGAAAT+AGG | 0.294275 | 2.1:-73223279 | MS.gene02221:CDS |
TCCAATTGTGGAACAGTATT+GGG | 0.296061 | 2.1:+73223834 | None:intergenic |
CGTTGAGCCGCCTAATGATC+TGG | 0.304974 | 2.1:-73222923 | MS.gene02221:CDS |
TTGGTAGAGCTGAACGGATT+TGG | 0.321158 | 2.1:+73224058 | None:intergenic |
AACTAGCATCAAAACCATTT+AGG | 0.324731 | 2.1:-73219990 | MS.gene02221:CDS |
TCCTGAGGCTCAAGCTGCTT+TGG | 0.324924 | 2.1:-73219410 | MS.gene02221:CDS |
TTCTTTATCTTGAGATTCTA+TGG | 0.334670 | 2.1:+73226423 | None:intergenic |
AGCTGATTTCTTTGAGGGAT+TGG | 0.334746 | 2.1:+73219951 | None:intergenic |
TTCTTAAACAATTGTCAGAT+TGG | 0.335380 | 2.1:-73223518 | MS.gene02221:CDS |
TTCGGATTTGGATTTGGATT+TGG | 0.336489 | 2.1:+73226285 | None:intergenic |
TCTGAATCATCAGAATCTTC+AGG | 0.341427 | 2.1:+73220565 | None:intergenic |
CTGGTGCTATCGACAAAATC+AGG | 0.343136 | 2.1:-73224971 | MS.gene02221:CDS |
GCTCTTGCAGTGTGCGCGAC+AGG | 0.343666 | 2.1:-73225021 | MS.gene02221:intron |
CCTATTCGCATATGGTGCTT+TGG | 0.344339 | 2.1:-73224773 | MS.gene02221:CDS |
GCTCTTCTTGCCTGTTTGCT+TGG | 0.345913 | 2.1:+73219514 | None:intergenic |
TCTTACTGTGTACTCACATT+TGG | 0.348622 | 2.1:-73220172 | MS.gene02221:CDS |
TCATCTGCACTTCCCGCATC+TGG | 0.348902 | 2.1:+73220733 | None:intergenic |
CTTCCTGAGTAATTGTTTGA+AGG | 0.360884 | 2.1:-73224011 | MS.gene02221:intron |
ACCCAATACTGTTCCACAAT+TGG | 0.365522 | 2.1:-73223835 | MS.gene02221:CDS |
AAAGAATCTCCTAGGACTAA+TGG | 0.365603 | 2.1:-73223243 | MS.gene02221:CDS |
TGGAAGTTCGGATTTGGATT+TGG | 0.366954 | 2.1:+73226279 | None:intergenic |
CGGCGGTGAATGAATCGATT+AGG | 0.368057 | 2.1:-73226159 | MS.gene02221:CDS |
GAAGGACTTGTAAGAGCAAC+TGG | 0.370111 | 2.1:+73221893 | None:intergenic |
CCGACAAATTCTTTGATGTA+TGG | 0.378528 | 2.1:+73224703 | None:intergenic |
GACTCGCCGAAAGTCTGATT+TGG | 0.381818 | 2.1:+73219675 | None:intergenic |
TGCAATGATATCACCGATGA+TGG | 0.384725 | 2.1:-73220808 | MS.gene02221:CDS |
ATCATCTTCTCCAGGGGACT+CGG | 0.388710 | 2.1:+73221792 | None:intergenic |
CTCTTGCAGTGTGCGCGACA+GGG | 0.392256 | 2.1:-73225020 | MS.gene02221:intron |
TCCAAAGCAGCTTGAGCCTC+AGG | 0.392723 | 2.1:+73219409 | None:intergenic |
AAGAATCTCCTAGGACTAAT+GGG | 0.392912 | 2.1:-73223242 | MS.gene02221:CDS |
GGAAGCAAAAGATTGTCTTC+TGG | 0.393079 | 2.1:-73224800 | MS.gene02221:CDS |
ACTTTGTTTGACAGAACAAC+TGG | 0.395748 | 2.1:+73223606 | None:intergenic |
TTCCAATTGTGGAACAGTAT+TGG | 0.400668 | 2.1:+73223833 | None:intergenic |
GTTGTTGGCAAATGCTCATA+AGG | 0.401304 | 2.1:-73222974 | MS.gene02221:CDS |
AGCCTCGTGTTCACAGTGTT+TGG | 0.402114 | 2.1:-73223881 | MS.gene02221:CDS |
GAAGCAAAAGATTGTCTTCT+GGG | 0.403903 | 2.1:-73224799 | MS.gene02221:CDS |
TCTTAAACAATTGTCAGATT+GGG | 0.407131 | 2.1:-73223517 | MS.gene02221:CDS |
TTTATATAGCCATGTGTTGT+TGG | 0.407224 | 2.1:+73223554 | None:intergenic |
CAAGGCAGCTGATTTCTTTG+AGG | 0.408677 | 2.1:+73219945 | None:intergenic |
ATAAGAATATTTATCAAAAC+AGG | 0.410894 | 2.1:+73223858 | None:intergenic |
TAGTGGTGGTGATTCGTTGC+CGG | 0.412588 | 2.1:-73226212 | MS.gene02221:CDS |
TACTTATCTCCCTTGCAAAT+AGG | 0.412858 | 2.1:-73224678 | MS.gene02221:CDS |
GCGAGTCGAAGCACTTGAAT+TGG | 0.414700 | 2.1:-73219659 | MS.gene02221:CDS |
AAAGCAAGGAATAGAGCATC+AGG | 0.414753 | 2.1:+73224133 | None:intergenic |
AATTGGACTTCATCACCCTT+TGG | 0.414789 | 2.1:+73220048 | None:intergenic |
GAGAAGATGATGCAGAGGTT+GGG | 0.415139 | 2.1:-73221780 | MS.gene02221:CDS |
GGCGGTGAATGAATCGATTA+GGG | 0.415824 | 2.1:-73226158 | MS.gene02221:CDS |
GACAAATATGCCAAGCAAAC+AGG | 0.416463 | 2.1:-73219524 | MS.gene02221:CDS |
GGGAGAGGGGCCACGTCCTT+CGG | 0.417055 | 2.1:-73222953 | MS.gene02221:CDS |
GATTCTGATGATTCAGATAG+TGG | 0.417094 | 2.1:-73220559 | MS.gene02221:CDS |
AAGTACGAACCCAGATCATT+AGG | 0.417639 | 2.1:+73222913 | None:intergenic |
ACCTCTGCATCATCTTCTCC+AGG | 0.418263 | 2.1:+73221784 | None:intergenic |
GCAGCTCAGTCAGCGTATAT+CGG | 0.418294 | 2.1:-73220109 | MS.gene02221:CDS |
CTGGGCCGCCTATTCGCATA+TGG | 0.421484 | 2.1:-73224781 | MS.gene02221:CDS |
GGAAGTTCAGAAGGCTTATG+AGG | 0.421556 | 2.1:-73226101 | MS.gene02221:CDS |
TGGGTTATAGAATCTCTTCC+TGG | 0.424403 | 2.1:-73223198 | MS.gene02221:CDS |
AAGGCAGCTGATTTCTTTGA+GGG | 0.429594 | 2.1:+73219946 | None:intergenic |
CCAAAGCACCATATGCGAAT+AGG | 0.434100 | 2.1:+73224773 | None:intergenic |
TCGTTGCCGGAGTTTCATAT+TGG | 0.435279 | 2.1:-73226199 | MS.gene02221:CDS |
ATTGTTGGTTTGGTTGAAGA+TGG | 0.436653 | 2.1:+73226355 | None:intergenic |
ATCGACACTTGAATCTCTCT+TGG | 0.440706 | 2.1:-73220025 | MS.gene02221:CDS |
CCAAAGCATAAATACCTCTC+TGG | 0.441278 | 2.1:+73222777 | None:intergenic |
CAAGCTGAGACTGGTGAAAC+AGG | 0.441508 | 2.1:-73220655 | MS.gene02221:CDS |
TGAACAGCTGCAGTTGTTGT+TGG | 0.442984 | 2.1:-73222989 | MS.gene02221:CDS |
AAATTTGATGAACCTGTTTG+TGG | 0.444596 | 2.1:-73223346 | MS.gene02221:CDS |
AAAGAGAAGAAAAGTCAGTC+TGG | 0.445191 | 2.1:-73220484 | MS.gene02221:CDS |
TGATTCGCTAATGCTTCAAC+AGG | 0.446357 | 2.1:+73224214 | None:intergenic |
GGAAGTAACTTCATCAATGA+AGG | 0.447215 | 2.1:-73224913 | MS.gene02221:CDS |
GTAGTTGAGGCAGATGAAAC+TGG | 0.447442 | 2.1:-73220598 | MS.gene02221:CDS |
CATTATCTTCATCCACAAAC+AGG | 0.448918 | 2.1:+73223334 | None:intergenic |
GGTCTGTTCACTGCATCTCT+TGG | 0.449608 | 2.1:-73223096 | MS.gene02221:CDS |
TCAACTAGCGGCGGCGGTAG+TGG | 0.449628 | 2.1:-73226229 | MS.gene02221:CDS |
TGGGGATGCACCTGAATTGA+TGG | 0.458302 | 2.1:-73221761 | MS.gene02221:CDS |
ACAAGAACATCCATCAATTC+AGG | 0.458388 | 2.1:+73221751 | None:intergenic |
CAGCTCAGTCAGCGTATATC+GGG | 0.458624 | 2.1:-73220108 | MS.gene02221:CDS |
GTTGTTTGACTCTGATCTGA+AGG | 0.458674 | 2.1:+73223300 | None:intergenic |
TGAAGTGACTTCATTTGAGT+TGG | 0.462021 | 2.1:-73223070 | MS.gene02221:CDS |
TATGGTGCTTTGGCTCGATC+AGG | 0.468033 | 2.1:-73224763 | MS.gene02221:CDS |
GAGTTTGAACAGCAAAAGTT+GGG | 0.470843 | 2.1:+73220444 | None:intergenic |
CGAGAAGTTACGAGTTCAAA+AGG | 0.471599 | 2.1:-73223145 | MS.gene02221:CDS |
GGAGTTTGAACAGCAAAAGT+TGG | 0.474644 | 2.1:+73220443 | None:intergenic |
ATTCTTCCCTTCACCACTCT+CGG | 0.476182 | 2.1:+73219609 | None:intergenic |
CAAAAGAGTTGCTGTTATAG+TGG | 0.477088 | 2.1:-73223478 | MS.gene02221:CDS |
TATAAAATTATTGAGACGGC+AGG | 0.477862 | 2.1:+73224637 | None:intergenic |
TGGATGATGATGCAATGTTC+AGG | 0.478667 | 2.1:-73220534 | MS.gene02221:CDS |
TTGAACAATCCTCTGCAGTT+CGG | 0.481594 | 2.1:+73219837 | None:intergenic |
GGCAAATGCTCATAAGGGAG+AGG | 0.486456 | 2.1:-73222968 | MS.gene02221:CDS |
GGTCAAGGGATGGAGATTGA+TGG | 0.487783 | 2.1:-73226076 | MS.gene02221:CDS |
TTTGAATCTGCTGCAGAAGT+TGG | 0.488189 | 2.1:-73224160 | MS.gene02221:CDS |
CATCGAAAGCTAAGTGCTTA+CGG | 0.488573 | 2.1:+73223670 | None:intergenic |
TATGCGGTCTGCTATTGATC+AGG | 0.490512 | 2.1:-73221689 | MS.gene02221:intron |
TCCCAATGGGTAGCAAGAAA+AGG | 0.490679 | 2.1:-73226453 | None:intergenic |
CGAACTTCCAGCTCCGGATT+CGG | 0.490726 | 2.1:-73226266 | MS.gene02221:CDS |
AACACATGGCTATATAAAGT+TGG | 0.490755 | 2.1:-73223549 | MS.gene02221:CDS |
CGAATCCGGAGCTGGAAGTT+CGG | 0.490766 | 2.1:+73226267 | None:intergenic |
ATGAAGTTTATGGCTGTTCA+GGG | 0.491134 | 2.1:-73223117 | MS.gene02221:CDS |
TCTACCAACATAGCCGAATC+CGG | 0.493250 | 2.1:+73226253 | None:intergenic |
AACTTCATCAATGAAGGGTC+AGG | 0.494749 | 2.1:-73224907 | MS.gene02221:intron |
TAAACAATTGTCAGATTGGG+TGG | 0.495021 | 2.1:-73223514 | MS.gene02221:CDS |
CAAATCCGAACTTCCAGCTC+CGG | 0.497690 | 2.1:-73226272 | MS.gene02221:CDS |
GGAGAAGATGATGCAGAGGT+TGG | 0.500648 | 2.1:-73221781 | MS.gene02221:CDS |
CCATACATCAAAGAATTTGT+CGG | 0.502813 | 2.1:-73224703 | MS.gene02221:CDS |
TCACCAACTCTTTCATAGCA+TGG | 0.505036 | 2.1:+73219545 | None:intergenic |
CTGAATCATCAGAATCTTCA+GGG | 0.505240 | 2.1:+73220566 | None:intergenic |
TCAAACCACTTGTCCAGTCC+AGG | 0.506758 | 2.1:+73224178 | None:intergenic |
TGGTGTGTTTAAGGATTTAG+CGG | 0.508774 | 2.1:-73226179 | MS.gene02221:CDS |
TGTTATTGAAGCTCCTGGAC+TGG | 0.511530 | 2.1:-73224191 | MS.gene02221:CDS |
TGAGGCAGATGAAACTGGTC+AGG | 0.511569 | 2.1:-73220593 | MS.gene02221:CDS |
AACTGAAGGAATATTGCATA+AGG | 0.511631 | 2.1:+73222873 | None:intergenic |
CACCAACTCTTTCATAGCAT+GGG | 0.511792 | 2.1:+73219546 | None:intergenic |
TCTGATATTCCCGAGTCCCC+TGG | 0.513649 | 2.1:-73221802 | MS.gene02221:CDS |
AGCTCCGGATTCGGCTATGT+TGG | 0.515555 | 2.1:-73226257 | MS.gene02221:CDS |
TCATCTTCTCCAGGGGACTC+GGG | 0.515831 | 2.1:+73221793 | None:intergenic |
TCAGAATTCCCATTAGTCCT+AGG | 0.515926 | 2.1:+73223234 | None:intergenic |
CAGGAAGACTTATCCATGAA+TGG | 0.517068 | 2.1:-73224744 | MS.gene02221:CDS |
TTTAAAAGAAGACCATGGAT+TGG | 0.519670 | 2.1:-73219739 | MS.gene02221:CDS |
GAATGAATCGATTAGGGAAG+CGG | 0.520234 | 2.1:-73226152 | MS.gene02221:CDS |
AAGGCTTATGAGGGTGGTCA+AGG | 0.520680 | 2.1:-73226091 | MS.gene02221:CDS |
AATCATGTTATTGAAGCTCC+TGG | 0.521109 | 2.1:-73224196 | MS.gene02221:CDS |
AACATAGCCGAATCCGGAGC+TGG | 0.524306 | 2.1:+73226259 | None:intergenic |
TTTCCAGTTTCTTCAAACAA+AGG | 0.525530 | 2.1:+73219365 | None:intergenic |
TTCAAGAATTTCAAAATACC+AGG | 0.527894 | 2.1:+73223180 | None:intergenic |
GTGAAACAGGTGAGAGCGAT+GGG | 0.528108 | 2.1:-73220642 | MS.gene02221:CDS |
TCACTAACTTCAGCAGTGTG+TGG | 0.529673 | 2.1:+73220132 | None:intergenic |
GCTGCTTTGGAAACACAACT+TGG | 0.530870 | 2.1:-73219397 | MS.gene02221:CDS |
TGAATTGATGGATGTTCTTG+TGG | 0.533307 | 2.1:-73221749 | MS.gene02221:CDS |
ATGGAGATTGATGGTGATGG+TGG | 0.533466 | 2.1:-73226067 | MS.gene02221:CDS |
CAAAGTTGTTCAGTGCCTGA+TGG | 0.535223 | 2.1:-73223589 | MS.gene02221:CDS |
GAAATTGATCAAGCTGAGAC+TGG | 0.535955 | 2.1:-73220664 | MS.gene02221:CDS |
TGGTTGATAGTATATCCATC+AGG | 0.537431 | 2.1:+73223574 | None:intergenic |
GAAGTGCCAAATCAGACTTT+CGG | 0.537715 | 2.1:-73219681 | MS.gene02221:CDS |
TTCTGAAATAGGCTCTATTG+AGG | 0.539258 | 2.1:-73223268 | MS.gene02221:CDS |
ATGTTACACAGGTAAGCCTC+AGG | 0.539889 | 2.1:-73220196 | MS.gene02221:intron |
AGGTGTTTCTTCTTCAAGAG+AGG | 0.542309 | 2.1:-73225963 | MS.gene02221:intron |
ACAAATGGTGAATGAGTTGA+AGG | 0.542466 | 2.1:-73226122 | MS.gene02221:CDS |
TTGAGGATAAAGAATCTCCT+AGG | 0.544287 | 2.1:-73223251 | MS.gene02221:CDS |
GCAGCTTCTGAGTACTCGCT+TGG | 0.545003 | 2.1:+73221865 | None:intergenic |
GTTGAGCCGCCTAATGATCT+GGG | 0.545720 | 2.1:-73222922 | MS.gene02221:CDS |
TGAGTTGAAGGAAGTTCAGA+AGG | 0.548314 | 2.1:-73226110 | MS.gene02221:CDS |
CGAAGCACTTGAATTGGTGA+TGG | 0.548587 | 2.1:-73219653 | MS.gene02221:CDS |
CTAGCAACCGAGAGTGGTGA+AGG | 0.552221 | 2.1:-73219616 | MS.gene02221:CDS |
CATCCTCATCATCTAAAGAC+CGG | 0.553770 | 2.1:+73222842 | None:intergenic |
ATCTTCAACCAAACCAACAA+TGG | 0.555287 | 2.1:-73226353 | MS.gene02221:CDS |
GAAGAAAATATTGAAAGCAA+AGG | 0.555883 | 2.1:-73220076 | MS.gene02221:CDS |
GCTGTTCGTAGATTGATTCG+AGG | 0.556442 | 2.1:-73225983 | MS.gene02221:CDS |
CTCCCATGCTATGAAAGAGT+TGG | 0.556719 | 2.1:-73219548 | MS.gene02221:CDS |
ACGACATCAGCCGAAGGACG+TGG | 0.558256 | 2.1:+73222943 | None:intergenic |
AGAAGATGATGCAGAGGTTG+GGG | 0.559328 | 2.1:-73221779 | MS.gene02221:CDS |
AGTAAAAGATTTGCAAGCAA+TGG | 0.559584 | 2.1:-73222812 | MS.gene02221:CDS |
CTTCCGGTCTTTAGATGATG+AGG | 0.560084 | 2.1:-73222845 | MS.gene02221:CDS |
AACACACCAATATGAAACTC+CGG | 0.560688 | 2.1:+73226193 | None:intergenic |
TTGTTGGCAAATGCTCATAA+GGG | 0.564120 | 2.1:-73222973 | MS.gene02221:CDS |
ACTAGCGGCGGCGGTAGTGG+TGG | 0.564350 | 2.1:-73226226 | MS.gene02221:CDS |
GGTCATGAGATGAGAAGAGA+AGG | 0.567102 | 2.1:+73223691 | None:intergenic |
GGAAGCGGCGGTGAAACAAA+TGG | 0.569612 | 2.1:-73226137 | MS.gene02221:CDS |
CATCCGCATCAGCCCATCAT+CGG | 0.572641 | 2.1:+73220795 | None:intergenic |
CCTGCAAGACATCCAGATGC+GGG | 0.573562 | 2.1:-73220745 | MS.gene02221:CDS |
AGTACTCGCTTGGACAAAGA+AGG | 0.573716 | 2.1:+73221875 | None:intergenic |
GTGTGGGTTAACAAAGGCAC+GGG | 0.575582 | 2.1:+73220149 | None:intergenic |
AAGCTCCTGGACTGGACAAG+TGG | 0.579076 | 2.1:-73224183 | MS.gene02221:CDS |
GCAAATGCTCATAAGGGAGA+GGG | 0.579740 | 2.1:-73222967 | MS.gene02221:CDS |
CACTAACTTCAGCAGTGTGT+GGG | 0.580709 | 2.1:+73220133 | None:intergenic |
TACTATCAACCAACAACACA+TGG | 0.581340 | 2.1:-73223563 | MS.gene02221:CDS |
AACAATTACTCAGGAAGGAG+AGG | 0.581483 | 2.1:+73224017 | None:intergenic |
ATACCTTCAAACAATTACTC+AGG | 0.583544 | 2.1:+73224008 | None:intergenic |
CAAGTATAAAATTATTGAGA+CGG | 0.585225 | 2.1:+73224633 | None:intergenic |
GTAGATTCAACTAGCGGCGG+CGG | 0.586586 | 2.1:-73226235 | MS.gene02221:CDS |
AGTACCGCTTCCTATTTGCA+AGG | 0.586680 | 2.1:+73224668 | None:intergenic |
TTGCGGAGTCCGAACTGCAG+AGG | 0.587099 | 2.1:-73219846 | MS.gene02221:CDS |
GGTGAAACAGGTGAGAGCGA+TGG | 0.587248 | 2.1:-73220643 | MS.gene02221:CDS |
GGATGAAGATAATGCCTTGG+AGG | 0.589707 | 2.1:-73223325 | MS.gene02221:CDS |
TTATGAGGGTGGTCAAGGGA+TGG | 0.589760 | 2.1:-73226086 | MS.gene02221:CDS |
CGACTCTGAGTCTGTAGTTG+AGG | 0.592639 | 2.1:-73220611 | MS.gene02221:CDS |
GCTATACAGAAGCACAGCAA+TGG | 0.593564 | 2.1:-73223456 | MS.gene02221:CDS |
TTGCAAAGAGCATTTGATGT+GGG | 0.593810 | 2.1:+73223021 | None:intergenic |
AATACAGCATGGCCAATCCA+TGG | 0.594671 | 2.1:+73219727 | None:intergenic |
ACTCAGGAAGGAGAGGTGAT+CGG | 0.597768 | 2.1:+73224024 | None:intergenic |
AAAGCAAAGGATCATCCAAA+GGG | 0.598470 | 2.1:-73220063 | MS.gene02221:CDS |
GAAAGCAAAGGATCATCCAA+AGG | 0.599025 | 2.1:-73220064 | MS.gene02221:CDS |
ATTCTGATGATTCAGATAGT+GGG | 0.599068 | 2.1:-73220558 | MS.gene02221:CDS |
GATGCCGCATCTTCCAATTG+TGG | 0.601907 | 2.1:+73223822 | None:intergenic |
CTTCAAACAATTACTCAGGA+AGG | 0.602501 | 2.1:+73224012 | None:intergenic |
AAACAATTGTCAGATTGGGT+GGG | 0.602741 | 2.1:-73223513 | MS.gene02221:CDS |
TGTGTGGGTTAACAAAGGCA+CGG | 0.602980 | 2.1:+73220148 | None:intergenic |
TCTCCCTTGCAAATAGGAAG+CGG | 0.604277 | 2.1:-73224672 | MS.gene02221:CDS |
TGGTGCTATCGACAAAATCA+GGG | 0.605594 | 2.1:-73224970 | MS.gene02221:CDS |
GAAGTAACTTCATCAATGAA+GGG | 0.606468 | 2.1:-73224912 | MS.gene02221:CDS |
CCTCTGCATCATCTTCTCCA+GGG | 0.606722 | 2.1:+73221785 | None:intergenic |
CGAACAGCATATCGAACAGA+AGG | 0.607154 | 2.1:+73225998 | None:intergenic |
TTTCCAATAATGAAAGGATG+CGG | 0.608175 | 2.1:+73220422 | None:intergenic |
AAGTCACTAGCAACCGAGAG+TGG | 0.609058 | 2.1:-73219622 | MS.gene02221:CDS |
TGTGGATGAAGATAATGCCT+TGG | 0.609887 | 2.1:-73223328 | MS.gene02221:CDS |
CTCTGCATCATCTTCTCCAG+GGG | 0.613059 | 2.1:+73221786 | None:intergenic |
GGGATGGAGATTGATGGTGA+TGG | 0.613191 | 2.1:-73226070 | MS.gene02221:CDS |
GCAATGATATCACCGATGAT+GGG | 0.613735 | 2.1:-73220807 | MS.gene02221:CDS |
GTACCGCTTCCTATTTGCAA+GGG | 0.614801 | 2.1:+73224669 | None:intergenic |
CTGATCTGAAGGTTCCTCCA+AGG | 0.616326 | 2.1:+73223311 | None:intergenic |
TCTTAAAACATTGACTCCTG+AGG | 0.616364 | 2.1:-73219425 | MS.gene02221:CDS |
ACCTGCAAGACATCCAGATG+CGG | 0.618983 | 2.1:-73220746 | MS.gene02221:CDS |
AGTACGTAAGTTCTGTGTCA+AGG | 0.622191 | 2.1:-73219488 | MS.gene02221:CDS |
TGTTCCACAATTGGAAGATG+CGG | 0.622868 | 2.1:-73223826 | MS.gene02221:CDS |
CCCTGGAGAAGATGATGCAG+AGG | 0.623336 | 2.1:-73221785 | MS.gene02221:CDS |
AGGCTTATGAGGGTGGTCAA+GGG | 0.628293 | 2.1:-73226090 | MS.gene02221:CDS |
AAATATTTAAAAGAAGACCA+TGG | 0.628974 | 2.1:-73219744 | MS.gene02221:CDS |
GTACATCATCACTGCAGTCG+TGG | 0.629610 | 2.1:+73221947 | None:intergenic |
GTTCAGAAGGCTTATGAGGG+TGG | 0.630689 | 2.1:-73226097 | MS.gene02221:CDS |
GAAGTTCAGAAGGCTTATGA+GGG | 0.633937 | 2.1:-73226100 | MS.gene02221:CDS |
TGATGATGCAATGTTCAGGA+TGG | 0.635467 | 2.1:-73220530 | MS.gene02221:CDS |
AAGCACCATATGCGAATAGG+CGG | 0.636479 | 2.1:+73224776 | None:intergenic |
GAACTCGTAACTTCTCGTCG+TGG | 0.643517 | 2.1:+73223151 | None:intergenic |
CTTGCAAAGAGCATTTGATG+TGG | 0.647224 | 2.1:+73223020 | None:intergenic |
GTGAACACGAGGCTGACAGA+AGG | 0.648318 | 2.1:+73223890 | None:intergenic |
GGCTCAACGACATCAGCCGA+AGG | 0.649021 | 2.1:+73222937 | None:intergenic |
TGATCAATAGCAGACCGCAT+AGG | 0.649279 | 2.1:+73221691 | None:intergenic |
CGCATAGGAGCTGATGACTG+TGG | 0.649317 | 2.1:+73221706 | None:intergenic |
CAAATGCTCATAAGGGAGAG+GGG | 0.651139 | 2.1:-73222966 | MS.gene02221:CDS |
AGCAGTGTGTGGGTTAACAA+AGG | 0.656507 | 2.1:+73220143 | None:intergenic |
GACCGGAAGAGAGAAACTGA+AGG | 0.657617 | 2.1:+73222859 | None:intergenic |
TCACAATTCAAAACAGAACC+CGG | 0.659461 | 2.1:-73223387 | MS.gene02221:CDS |
TAGCAACCGAGAGTGGTGAA+GGG | 0.660003 | 2.1:-73219615 | MS.gene02221:CDS |
CACAGTCATCAGCTCCTATG+CGG | 0.663288 | 2.1:-73221705 | MS.gene02221:CDS |
AAATAAAGCCAAATACAGCA+TGG | 0.665895 | 2.1:+73219716 | None:intergenic |
GTCATGAGATGAGAAGAGAA+GGG | 0.666467 | 2.1:+73223692 | None:intergenic |
TCACCGATGATGGGCTGATG+CGG | 0.668428 | 2.1:-73220798 | MS.gene02221:CDS |
TGATGATTCAGATAGTGGGA+TGG | 0.668681 | 2.1:-73220554 | MS.gene02221:CDS |
GGCCAAACACTGTGAACACG+AGG | 0.670920 | 2.1:+73223879 | None:intergenic |
TGAATCGATTAGGGAAGCGG+CGG | 0.676427 | 2.1:-73226149 | MS.gene02221:CDS |
TGTGTTTAAGGATTTAGCGG+CGG | 0.680588 | 2.1:-73226176 | MS.gene02221:CDS |
AGTTGGACGAGAAATTTAGG+TGG | 0.682366 | 2.1:-73223053 | MS.gene02221:CDS |
ATGTTGGTAGATTCAACTAG+CGG | 0.687387 | 2.1:-73226241 | MS.gene02221:CDS |
GAAAATTTGACTGTATCACA+AGG | 0.688705 | 2.1:-73223434 | MS.gene02221:CDS |
CAGGAAGGAGAGGTGATCGG+CGG | 0.689005 | 2.1:+73224027 | None:intergenic |
GGAAGCTACATTATCCAGAG+AGG | 0.695301 | 2.1:-73222791 | MS.gene02221:intron |
GAGTACACAGTAAGAACCTG+AGG | 0.695385 | 2.1:+73220180 | None:intergenic |
TACGAACCCAGATCATTAGG+CGG | 0.700755 | 2.1:+73222916 | None:intergenic |
TTGGTAGATTCAACTAGCGG+CGG | 0.734446 | 2.1:-73226238 | MS.gene02221:CDS |
AATCATCAGAATCTTCAGGG+TGG | 0.753774 | 2.1:+73220569 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 73219360 | 73226470 | 73219360 | ID=MS.gene02221 |
chr2.1 | mRNA | 73219360 | 73226470 | 73219360 | ID=MS.gene02221.t1;Parent=MS.gene02221 |
chr2.1 | exon | 73225964 | 73226470 | 73225964 | ID=MS.gene02221.t1.exon1;Parent=MS.gene02221.t1 |
chr2.1 | CDS | 73225964 | 73226470 | 73225964 | ID=cds.MS.gene02221.t1;Parent=MS.gene02221.t1 |
chr2.1 | exon | 73224908 | 73225033 | 73224908 | ID=MS.gene02221.t1.exon2;Parent=MS.gene02221.t1 |
chr2.1 | CDS | 73224908 | 73225033 | 73224908 | ID=cds.MS.gene02221.t1;Parent=MS.gene02221.t1 |
chr2.1 | exon | 73224624 | 73224821 | 73224624 | ID=MS.gene02221.t1.exon3;Parent=MS.gene02221.t1 |
chr2.1 | CDS | 73224624 | 73224821 | 73224624 | ID=cds.MS.gene02221.t1;Parent=MS.gene02221.t1 |
chr2.1 | exon | 73224012 | 73224239 | 73224012 | ID=MS.gene02221.t1.exon4;Parent=MS.gene02221.t1 |
chr2.1 | CDS | 73224012 | 73224239 | 73224012 | ID=cds.MS.gene02221.t1;Parent=MS.gene02221.t1 |
chr2.1 | exon | 73222792 | 73223919 | 73222792 | ID=MS.gene02221.t1.exon5;Parent=MS.gene02221.t1 |
chr2.1 | CDS | 73222792 | 73223919 | 73222792 | ID=cds.MS.gene02221.t1;Parent=MS.gene02221.t1 |
chr2.1 | exon | 73221690 | 73221977 | 73221690 | ID=MS.gene02221.t1.exon6;Parent=MS.gene02221.t1 |
chr2.1 | CDS | 73221690 | 73221977 | 73221690 | ID=cds.MS.gene02221.t1;Parent=MS.gene02221.t1 |
chr2.1 | exon | 73220401 | 73220845 | 73220401 | ID=MS.gene02221.t1.exon7;Parent=MS.gene02221.t1 |
chr2.1 | CDS | 73220401 | 73220845 | 73220401 | ID=cds.MS.gene02221.t1;Parent=MS.gene02221.t1 |
chr2.1 | exon | 73219360 | 73220207 | 73219360 | ID=MS.gene02221.t1.exon8;Parent=MS.gene02221.t1 |
chr2.1 | CDS | 73219360 | 73220207 | 73219360 | ID=cds.MS.gene02221.t1;Parent=MS.gene02221.t1 |
Gene Sequence |
Protein sequence |