Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02221.t1 | XP_003593314.1 | 97.4 | 1258 | 30 | 2 | 1 | 1255 | 1 | 1258 | 0.00E+00 | 2213.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02221.t1 | O60094 | 20.3 | 711 | 465 | 20 | 153 | 847 | 38 | 662 | 1.5e-21 | 107.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02221.t1 | G7ISA4 | 97.4 | 1258 | 30 | 2 | 1 | 1255 | 1 | 1258 | 0.0e+00 | 2213.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene05640 | MS.gene02221 | PPI |
| MS.gene04079 | MS.gene02221 | PPI |
| MS.gene08109 | MS.gene02221 | PPI |
| MS.gene04418 | MS.gene02221 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02221.t1 | MTR_2g010110 | 97.377 | 1258 | 30 | 2 | 1 | 1255 | 1 | 1258 | 0.0 | 2498 |
| MS.gene02221.t1 | MTR_2g086320 | 66.964 | 112 | 18 | 2 | 533 | 644 | 1 | 93 | 9.86e-36 | 131 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02221.t1 | AT5G64420 | 57.634 | 1251 | 499 | 8 | 33 | 1254 | 57 | 1305 | 0.0 | 1297 |
Find 257 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTCCGCATCCTTTCATTAT+TGG | 0.108234 | 2.1:-73220425 | MS.gene02221:CDS |
| TGCTGTATTTGGCTTTATTT+TGG | 0.128918 | 2.1:-73219713 | MS.gene02221:CDS |
| TCTACAGACAGTTCCATTTA+TGG | 0.143885 | 2.1:-73224091 | MS.gene02221:CDS |
| GCATTTGATGTGGGAGATTT+TGG | 0.150780 | 2.1:+73223030 | None:intergenic |
| AAATCCAAAAGGAAGAATTT+TGG | 0.171453 | 2.1:+73219893 | None:intergenic |
| AAAGGAAATAATGAAGTTTA+TGG | 0.180478 | 2.1:-73223127 | MS.gene02221:CDS |
| TAAACTCGTAGTAGATTTAT+TGG | 0.186853 | 2.1:-73224934 | MS.gene02221:CDS |
| ATAAATCTACTACGAGTTTA+AGG | 0.201598 | 2.1:+73224937 | None:intergenic |
| TGGTAGTAGTTTGCCATAAA+TGG | 0.204218 | 2.1:+73224078 | None:intergenic |
| GTTTCATATTGGTGTGTTTA+AGG | 0.207989 | 2.1:-73226188 | MS.gene02221:CDS |
| CCCGCATCTGGATGTCTTGC+AGG | 0.208201 | 2.1:+73220745 | None:intergenic |
| TTGCCCAAAATTCTTCCTTT+TGG | 0.208711 | 2.1:-73219897 | MS.gene02221:CDS |
| TTGAGTTGGACGAGAAATTT+AGG | 0.244796 | 2.1:-73223056 | MS.gene02221:CDS |
| CGGAGCTGGAAGTTCGGATT+TGG | 0.249234 | 2.1:+73226273 | None:intergenic |
| TGCCTTGAACCGATATAAAA+TGG | 0.254681 | 2.1:-73219929 | MS.gene02221:CDS |
| AATGAAGTTTATGGCTGTTC+AGG | 0.254880 | 2.1:-73223118 | MS.gene02221:CDS |
| ATTCCTTTGTTTGAAGAAAC+TGG | 0.256200 | 2.1:-73219368 | MS.gene02221:CDS |
| TGGATTGGCCATGCTGTATT+TGG | 0.268961 | 2.1:-73219724 | MS.gene02221:CDS |
| TTCCTTCAGTTTCTCTCTTC+CGG | 0.279221 | 2.1:-73222861 | MS.gene02221:CDS |
| GAGATTCAAGTGTCGATAAT+TGG | 0.285987 | 2.1:+73220031 | None:intergenic |
| ACAGACGAAAATTCTGAAAT+AGG | 0.294275 | 2.1:-73223279 | MS.gene02221:CDS |
| TCCAATTGTGGAACAGTATT+GGG | 0.296061 | 2.1:+73223834 | None:intergenic |
| CGTTGAGCCGCCTAATGATC+TGG | 0.304974 | 2.1:-73222923 | MS.gene02221:CDS |
| TTGGTAGAGCTGAACGGATT+TGG | 0.321158 | 2.1:+73224058 | None:intergenic |
| AACTAGCATCAAAACCATTT+AGG | 0.324731 | 2.1:-73219990 | MS.gene02221:CDS |
| TCCTGAGGCTCAAGCTGCTT+TGG | 0.324924 | 2.1:-73219410 | MS.gene02221:CDS |
| TTCTTTATCTTGAGATTCTA+TGG | 0.334670 | 2.1:+73226423 | None:intergenic |
| AGCTGATTTCTTTGAGGGAT+TGG | 0.334746 | 2.1:+73219951 | None:intergenic |
| TTCTTAAACAATTGTCAGAT+TGG | 0.335380 | 2.1:-73223518 | MS.gene02221:CDS |
| TTCGGATTTGGATTTGGATT+TGG | 0.336489 | 2.1:+73226285 | None:intergenic |
| TCTGAATCATCAGAATCTTC+AGG | 0.341427 | 2.1:+73220565 | None:intergenic |
| CTGGTGCTATCGACAAAATC+AGG | 0.343136 | 2.1:-73224971 | MS.gene02221:CDS |
| GCTCTTGCAGTGTGCGCGAC+AGG | 0.343666 | 2.1:-73225021 | MS.gene02221:intron |
| CCTATTCGCATATGGTGCTT+TGG | 0.344339 | 2.1:-73224773 | MS.gene02221:CDS |
| GCTCTTCTTGCCTGTTTGCT+TGG | 0.345913 | 2.1:+73219514 | None:intergenic |
| TCTTACTGTGTACTCACATT+TGG | 0.348622 | 2.1:-73220172 | MS.gene02221:CDS |
| TCATCTGCACTTCCCGCATC+TGG | 0.348902 | 2.1:+73220733 | None:intergenic |
| CTTCCTGAGTAATTGTTTGA+AGG | 0.360884 | 2.1:-73224011 | MS.gene02221:intron |
| ACCCAATACTGTTCCACAAT+TGG | 0.365522 | 2.1:-73223835 | MS.gene02221:CDS |
| AAAGAATCTCCTAGGACTAA+TGG | 0.365603 | 2.1:-73223243 | MS.gene02221:CDS |
| TGGAAGTTCGGATTTGGATT+TGG | 0.366954 | 2.1:+73226279 | None:intergenic |
| CGGCGGTGAATGAATCGATT+AGG | 0.368057 | 2.1:-73226159 | MS.gene02221:CDS |
| GAAGGACTTGTAAGAGCAAC+TGG | 0.370111 | 2.1:+73221893 | None:intergenic |
| CCGACAAATTCTTTGATGTA+TGG | 0.378528 | 2.1:+73224703 | None:intergenic |
| GACTCGCCGAAAGTCTGATT+TGG | 0.381818 | 2.1:+73219675 | None:intergenic |
| TGCAATGATATCACCGATGA+TGG | 0.384725 | 2.1:-73220808 | MS.gene02221:CDS |
| ATCATCTTCTCCAGGGGACT+CGG | 0.388710 | 2.1:+73221792 | None:intergenic |
| CTCTTGCAGTGTGCGCGACA+GGG | 0.392256 | 2.1:-73225020 | MS.gene02221:intron |
| TCCAAAGCAGCTTGAGCCTC+AGG | 0.392723 | 2.1:+73219409 | None:intergenic |
| AAGAATCTCCTAGGACTAAT+GGG | 0.392912 | 2.1:-73223242 | MS.gene02221:CDS |
| GGAAGCAAAAGATTGTCTTC+TGG | 0.393079 | 2.1:-73224800 | MS.gene02221:CDS |
| ACTTTGTTTGACAGAACAAC+TGG | 0.395748 | 2.1:+73223606 | None:intergenic |
| TTCCAATTGTGGAACAGTAT+TGG | 0.400668 | 2.1:+73223833 | None:intergenic |
| GTTGTTGGCAAATGCTCATA+AGG | 0.401304 | 2.1:-73222974 | MS.gene02221:CDS |
| AGCCTCGTGTTCACAGTGTT+TGG | 0.402114 | 2.1:-73223881 | MS.gene02221:CDS |
| GAAGCAAAAGATTGTCTTCT+GGG | 0.403903 | 2.1:-73224799 | MS.gene02221:CDS |
| TCTTAAACAATTGTCAGATT+GGG | 0.407131 | 2.1:-73223517 | MS.gene02221:CDS |
| TTTATATAGCCATGTGTTGT+TGG | 0.407224 | 2.1:+73223554 | None:intergenic |
| CAAGGCAGCTGATTTCTTTG+AGG | 0.408677 | 2.1:+73219945 | None:intergenic |
| ATAAGAATATTTATCAAAAC+AGG | 0.410894 | 2.1:+73223858 | None:intergenic |
| TAGTGGTGGTGATTCGTTGC+CGG | 0.412588 | 2.1:-73226212 | MS.gene02221:CDS |
| TACTTATCTCCCTTGCAAAT+AGG | 0.412858 | 2.1:-73224678 | MS.gene02221:CDS |
| GCGAGTCGAAGCACTTGAAT+TGG | 0.414700 | 2.1:-73219659 | MS.gene02221:CDS |
| AAAGCAAGGAATAGAGCATC+AGG | 0.414753 | 2.1:+73224133 | None:intergenic |
| AATTGGACTTCATCACCCTT+TGG | 0.414789 | 2.1:+73220048 | None:intergenic |
| GAGAAGATGATGCAGAGGTT+GGG | 0.415139 | 2.1:-73221780 | MS.gene02221:CDS |
| GGCGGTGAATGAATCGATTA+GGG | 0.415824 | 2.1:-73226158 | MS.gene02221:CDS |
| GACAAATATGCCAAGCAAAC+AGG | 0.416463 | 2.1:-73219524 | MS.gene02221:CDS |
| GGGAGAGGGGCCACGTCCTT+CGG | 0.417055 | 2.1:-73222953 | MS.gene02221:CDS |
| GATTCTGATGATTCAGATAG+TGG | 0.417094 | 2.1:-73220559 | MS.gene02221:CDS |
| AAGTACGAACCCAGATCATT+AGG | 0.417639 | 2.1:+73222913 | None:intergenic |
| ACCTCTGCATCATCTTCTCC+AGG | 0.418263 | 2.1:+73221784 | None:intergenic |
| GCAGCTCAGTCAGCGTATAT+CGG | 0.418294 | 2.1:-73220109 | MS.gene02221:CDS |
| CTGGGCCGCCTATTCGCATA+TGG | 0.421484 | 2.1:-73224781 | MS.gene02221:CDS |
| GGAAGTTCAGAAGGCTTATG+AGG | 0.421556 | 2.1:-73226101 | MS.gene02221:CDS |
| TGGGTTATAGAATCTCTTCC+TGG | 0.424403 | 2.1:-73223198 | MS.gene02221:CDS |
| AAGGCAGCTGATTTCTTTGA+GGG | 0.429594 | 2.1:+73219946 | None:intergenic |
| CCAAAGCACCATATGCGAAT+AGG | 0.434100 | 2.1:+73224773 | None:intergenic |
| TCGTTGCCGGAGTTTCATAT+TGG | 0.435279 | 2.1:-73226199 | MS.gene02221:CDS |
| ATTGTTGGTTTGGTTGAAGA+TGG | 0.436653 | 2.1:+73226355 | None:intergenic |
| ATCGACACTTGAATCTCTCT+TGG | 0.440706 | 2.1:-73220025 | MS.gene02221:CDS |
| CCAAAGCATAAATACCTCTC+TGG | 0.441278 | 2.1:+73222777 | None:intergenic |
| CAAGCTGAGACTGGTGAAAC+AGG | 0.441508 | 2.1:-73220655 | MS.gene02221:CDS |
| TGAACAGCTGCAGTTGTTGT+TGG | 0.442984 | 2.1:-73222989 | MS.gene02221:CDS |
| AAATTTGATGAACCTGTTTG+TGG | 0.444596 | 2.1:-73223346 | MS.gene02221:CDS |
| AAAGAGAAGAAAAGTCAGTC+TGG | 0.445191 | 2.1:-73220484 | MS.gene02221:CDS |
| TGATTCGCTAATGCTTCAAC+AGG | 0.446357 | 2.1:+73224214 | None:intergenic |
| GGAAGTAACTTCATCAATGA+AGG | 0.447215 | 2.1:-73224913 | MS.gene02221:CDS |
| GTAGTTGAGGCAGATGAAAC+TGG | 0.447442 | 2.1:-73220598 | MS.gene02221:CDS |
| CATTATCTTCATCCACAAAC+AGG | 0.448918 | 2.1:+73223334 | None:intergenic |
| GGTCTGTTCACTGCATCTCT+TGG | 0.449608 | 2.1:-73223096 | MS.gene02221:CDS |
| TCAACTAGCGGCGGCGGTAG+TGG | 0.449628 | 2.1:-73226229 | MS.gene02221:CDS |
| TGGGGATGCACCTGAATTGA+TGG | 0.458302 | 2.1:-73221761 | MS.gene02221:CDS |
| ACAAGAACATCCATCAATTC+AGG | 0.458388 | 2.1:+73221751 | None:intergenic |
| CAGCTCAGTCAGCGTATATC+GGG | 0.458624 | 2.1:-73220108 | MS.gene02221:CDS |
| GTTGTTTGACTCTGATCTGA+AGG | 0.458674 | 2.1:+73223300 | None:intergenic |
| TGAAGTGACTTCATTTGAGT+TGG | 0.462021 | 2.1:-73223070 | MS.gene02221:CDS |
| TATGGTGCTTTGGCTCGATC+AGG | 0.468033 | 2.1:-73224763 | MS.gene02221:CDS |
| GAGTTTGAACAGCAAAAGTT+GGG | 0.470843 | 2.1:+73220444 | None:intergenic |
| CGAGAAGTTACGAGTTCAAA+AGG | 0.471599 | 2.1:-73223145 | MS.gene02221:CDS |
| GGAGTTTGAACAGCAAAAGT+TGG | 0.474644 | 2.1:+73220443 | None:intergenic |
| ATTCTTCCCTTCACCACTCT+CGG | 0.476182 | 2.1:+73219609 | None:intergenic |
| CAAAAGAGTTGCTGTTATAG+TGG | 0.477088 | 2.1:-73223478 | MS.gene02221:CDS |
| TATAAAATTATTGAGACGGC+AGG | 0.477862 | 2.1:+73224637 | None:intergenic |
| TGGATGATGATGCAATGTTC+AGG | 0.478667 | 2.1:-73220534 | MS.gene02221:CDS |
| TTGAACAATCCTCTGCAGTT+CGG | 0.481594 | 2.1:+73219837 | None:intergenic |
| GGCAAATGCTCATAAGGGAG+AGG | 0.486456 | 2.1:-73222968 | MS.gene02221:CDS |
| GGTCAAGGGATGGAGATTGA+TGG | 0.487783 | 2.1:-73226076 | MS.gene02221:CDS |
| TTTGAATCTGCTGCAGAAGT+TGG | 0.488189 | 2.1:-73224160 | MS.gene02221:CDS |
| CATCGAAAGCTAAGTGCTTA+CGG | 0.488573 | 2.1:+73223670 | None:intergenic |
| TATGCGGTCTGCTATTGATC+AGG | 0.490512 | 2.1:-73221689 | MS.gene02221:intron |
| TCCCAATGGGTAGCAAGAAA+AGG | 0.490679 | 2.1:-73226453 | None:intergenic |
| CGAACTTCCAGCTCCGGATT+CGG | 0.490726 | 2.1:-73226266 | MS.gene02221:CDS |
| AACACATGGCTATATAAAGT+TGG | 0.490755 | 2.1:-73223549 | MS.gene02221:CDS |
| CGAATCCGGAGCTGGAAGTT+CGG | 0.490766 | 2.1:+73226267 | None:intergenic |
| ATGAAGTTTATGGCTGTTCA+GGG | 0.491134 | 2.1:-73223117 | MS.gene02221:CDS |
| TCTACCAACATAGCCGAATC+CGG | 0.493250 | 2.1:+73226253 | None:intergenic |
| AACTTCATCAATGAAGGGTC+AGG | 0.494749 | 2.1:-73224907 | MS.gene02221:intron |
| TAAACAATTGTCAGATTGGG+TGG | 0.495021 | 2.1:-73223514 | MS.gene02221:CDS |
| CAAATCCGAACTTCCAGCTC+CGG | 0.497690 | 2.1:-73226272 | MS.gene02221:CDS |
| GGAGAAGATGATGCAGAGGT+TGG | 0.500648 | 2.1:-73221781 | MS.gene02221:CDS |
| CCATACATCAAAGAATTTGT+CGG | 0.502813 | 2.1:-73224703 | MS.gene02221:CDS |
| TCACCAACTCTTTCATAGCA+TGG | 0.505036 | 2.1:+73219545 | None:intergenic |
| CTGAATCATCAGAATCTTCA+GGG | 0.505240 | 2.1:+73220566 | None:intergenic |
| TCAAACCACTTGTCCAGTCC+AGG | 0.506758 | 2.1:+73224178 | None:intergenic |
| TGGTGTGTTTAAGGATTTAG+CGG | 0.508774 | 2.1:-73226179 | MS.gene02221:CDS |
| TGTTATTGAAGCTCCTGGAC+TGG | 0.511530 | 2.1:-73224191 | MS.gene02221:CDS |
| TGAGGCAGATGAAACTGGTC+AGG | 0.511569 | 2.1:-73220593 | MS.gene02221:CDS |
| AACTGAAGGAATATTGCATA+AGG | 0.511631 | 2.1:+73222873 | None:intergenic |
| CACCAACTCTTTCATAGCAT+GGG | 0.511792 | 2.1:+73219546 | None:intergenic |
| TCTGATATTCCCGAGTCCCC+TGG | 0.513649 | 2.1:-73221802 | MS.gene02221:CDS |
| AGCTCCGGATTCGGCTATGT+TGG | 0.515555 | 2.1:-73226257 | MS.gene02221:CDS |
| TCATCTTCTCCAGGGGACTC+GGG | 0.515831 | 2.1:+73221793 | None:intergenic |
| TCAGAATTCCCATTAGTCCT+AGG | 0.515926 | 2.1:+73223234 | None:intergenic |
| CAGGAAGACTTATCCATGAA+TGG | 0.517068 | 2.1:-73224744 | MS.gene02221:CDS |
| TTTAAAAGAAGACCATGGAT+TGG | 0.519670 | 2.1:-73219739 | MS.gene02221:CDS |
| GAATGAATCGATTAGGGAAG+CGG | 0.520234 | 2.1:-73226152 | MS.gene02221:CDS |
| AAGGCTTATGAGGGTGGTCA+AGG | 0.520680 | 2.1:-73226091 | MS.gene02221:CDS |
| AATCATGTTATTGAAGCTCC+TGG | 0.521109 | 2.1:-73224196 | MS.gene02221:CDS |
| AACATAGCCGAATCCGGAGC+TGG | 0.524306 | 2.1:+73226259 | None:intergenic |
| TTTCCAGTTTCTTCAAACAA+AGG | 0.525530 | 2.1:+73219365 | None:intergenic |
| TTCAAGAATTTCAAAATACC+AGG | 0.527894 | 2.1:+73223180 | None:intergenic |
| GTGAAACAGGTGAGAGCGAT+GGG | 0.528108 | 2.1:-73220642 | MS.gene02221:CDS |
| TCACTAACTTCAGCAGTGTG+TGG | 0.529673 | 2.1:+73220132 | None:intergenic |
| GCTGCTTTGGAAACACAACT+TGG | 0.530870 | 2.1:-73219397 | MS.gene02221:CDS |
| TGAATTGATGGATGTTCTTG+TGG | 0.533307 | 2.1:-73221749 | MS.gene02221:CDS |
| ATGGAGATTGATGGTGATGG+TGG | 0.533466 | 2.1:-73226067 | MS.gene02221:CDS |
| CAAAGTTGTTCAGTGCCTGA+TGG | 0.535223 | 2.1:-73223589 | MS.gene02221:CDS |
| GAAATTGATCAAGCTGAGAC+TGG | 0.535955 | 2.1:-73220664 | MS.gene02221:CDS |
| TGGTTGATAGTATATCCATC+AGG | 0.537431 | 2.1:+73223574 | None:intergenic |
| GAAGTGCCAAATCAGACTTT+CGG | 0.537715 | 2.1:-73219681 | MS.gene02221:CDS |
| TTCTGAAATAGGCTCTATTG+AGG | 0.539258 | 2.1:-73223268 | MS.gene02221:CDS |
| ATGTTACACAGGTAAGCCTC+AGG | 0.539889 | 2.1:-73220196 | MS.gene02221:intron |
| AGGTGTTTCTTCTTCAAGAG+AGG | 0.542309 | 2.1:-73225963 | MS.gene02221:intron |
| ACAAATGGTGAATGAGTTGA+AGG | 0.542466 | 2.1:-73226122 | MS.gene02221:CDS |
| TTGAGGATAAAGAATCTCCT+AGG | 0.544287 | 2.1:-73223251 | MS.gene02221:CDS |
| GCAGCTTCTGAGTACTCGCT+TGG | 0.545003 | 2.1:+73221865 | None:intergenic |
| GTTGAGCCGCCTAATGATCT+GGG | 0.545720 | 2.1:-73222922 | MS.gene02221:CDS |
| TGAGTTGAAGGAAGTTCAGA+AGG | 0.548314 | 2.1:-73226110 | MS.gene02221:CDS |
| CGAAGCACTTGAATTGGTGA+TGG | 0.548587 | 2.1:-73219653 | MS.gene02221:CDS |
| CTAGCAACCGAGAGTGGTGA+AGG | 0.552221 | 2.1:-73219616 | MS.gene02221:CDS |
| CATCCTCATCATCTAAAGAC+CGG | 0.553770 | 2.1:+73222842 | None:intergenic |
| ATCTTCAACCAAACCAACAA+TGG | 0.555287 | 2.1:-73226353 | MS.gene02221:CDS |
| GAAGAAAATATTGAAAGCAA+AGG | 0.555883 | 2.1:-73220076 | MS.gene02221:CDS |
| GCTGTTCGTAGATTGATTCG+AGG | 0.556442 | 2.1:-73225983 | MS.gene02221:CDS |
| CTCCCATGCTATGAAAGAGT+TGG | 0.556719 | 2.1:-73219548 | MS.gene02221:CDS |
| ACGACATCAGCCGAAGGACG+TGG | 0.558256 | 2.1:+73222943 | None:intergenic |
| AGAAGATGATGCAGAGGTTG+GGG | 0.559328 | 2.1:-73221779 | MS.gene02221:CDS |
| AGTAAAAGATTTGCAAGCAA+TGG | 0.559584 | 2.1:-73222812 | MS.gene02221:CDS |
| CTTCCGGTCTTTAGATGATG+AGG | 0.560084 | 2.1:-73222845 | MS.gene02221:CDS |
| AACACACCAATATGAAACTC+CGG | 0.560688 | 2.1:+73226193 | None:intergenic |
| TTGTTGGCAAATGCTCATAA+GGG | 0.564120 | 2.1:-73222973 | MS.gene02221:CDS |
| ACTAGCGGCGGCGGTAGTGG+TGG | 0.564350 | 2.1:-73226226 | MS.gene02221:CDS |
| GGTCATGAGATGAGAAGAGA+AGG | 0.567102 | 2.1:+73223691 | None:intergenic |
| GGAAGCGGCGGTGAAACAAA+TGG | 0.569612 | 2.1:-73226137 | MS.gene02221:CDS |
| CATCCGCATCAGCCCATCAT+CGG | 0.572641 | 2.1:+73220795 | None:intergenic |
| CCTGCAAGACATCCAGATGC+GGG | 0.573562 | 2.1:-73220745 | MS.gene02221:CDS |
| AGTACTCGCTTGGACAAAGA+AGG | 0.573716 | 2.1:+73221875 | None:intergenic |
| GTGTGGGTTAACAAAGGCAC+GGG | 0.575582 | 2.1:+73220149 | None:intergenic |
| AAGCTCCTGGACTGGACAAG+TGG | 0.579076 | 2.1:-73224183 | MS.gene02221:CDS |
| GCAAATGCTCATAAGGGAGA+GGG | 0.579740 | 2.1:-73222967 | MS.gene02221:CDS |
| CACTAACTTCAGCAGTGTGT+GGG | 0.580709 | 2.1:+73220133 | None:intergenic |
| TACTATCAACCAACAACACA+TGG | 0.581340 | 2.1:-73223563 | MS.gene02221:CDS |
| AACAATTACTCAGGAAGGAG+AGG | 0.581483 | 2.1:+73224017 | None:intergenic |
| ATACCTTCAAACAATTACTC+AGG | 0.583544 | 2.1:+73224008 | None:intergenic |
| CAAGTATAAAATTATTGAGA+CGG | 0.585225 | 2.1:+73224633 | None:intergenic |
| GTAGATTCAACTAGCGGCGG+CGG | 0.586586 | 2.1:-73226235 | MS.gene02221:CDS |
| AGTACCGCTTCCTATTTGCA+AGG | 0.586680 | 2.1:+73224668 | None:intergenic |
| TTGCGGAGTCCGAACTGCAG+AGG | 0.587099 | 2.1:-73219846 | MS.gene02221:CDS |
| GGTGAAACAGGTGAGAGCGA+TGG | 0.587248 | 2.1:-73220643 | MS.gene02221:CDS |
| GGATGAAGATAATGCCTTGG+AGG | 0.589707 | 2.1:-73223325 | MS.gene02221:CDS |
| TTATGAGGGTGGTCAAGGGA+TGG | 0.589760 | 2.1:-73226086 | MS.gene02221:CDS |
| CGACTCTGAGTCTGTAGTTG+AGG | 0.592639 | 2.1:-73220611 | MS.gene02221:CDS |
| GCTATACAGAAGCACAGCAA+TGG | 0.593564 | 2.1:-73223456 | MS.gene02221:CDS |
| TTGCAAAGAGCATTTGATGT+GGG | 0.593810 | 2.1:+73223021 | None:intergenic |
| AATACAGCATGGCCAATCCA+TGG | 0.594671 | 2.1:+73219727 | None:intergenic |
| ACTCAGGAAGGAGAGGTGAT+CGG | 0.597768 | 2.1:+73224024 | None:intergenic |
| AAAGCAAAGGATCATCCAAA+GGG | 0.598470 | 2.1:-73220063 | MS.gene02221:CDS |
| GAAAGCAAAGGATCATCCAA+AGG | 0.599025 | 2.1:-73220064 | MS.gene02221:CDS |
| ATTCTGATGATTCAGATAGT+GGG | 0.599068 | 2.1:-73220558 | MS.gene02221:CDS |
| GATGCCGCATCTTCCAATTG+TGG | 0.601907 | 2.1:+73223822 | None:intergenic |
| CTTCAAACAATTACTCAGGA+AGG | 0.602501 | 2.1:+73224012 | None:intergenic |
| AAACAATTGTCAGATTGGGT+GGG | 0.602741 | 2.1:-73223513 | MS.gene02221:CDS |
| TGTGTGGGTTAACAAAGGCA+CGG | 0.602980 | 2.1:+73220148 | None:intergenic |
| TCTCCCTTGCAAATAGGAAG+CGG | 0.604277 | 2.1:-73224672 | MS.gene02221:CDS |
| TGGTGCTATCGACAAAATCA+GGG | 0.605594 | 2.1:-73224970 | MS.gene02221:CDS |
| GAAGTAACTTCATCAATGAA+GGG | 0.606468 | 2.1:-73224912 | MS.gene02221:CDS |
| CCTCTGCATCATCTTCTCCA+GGG | 0.606722 | 2.1:+73221785 | None:intergenic |
| CGAACAGCATATCGAACAGA+AGG | 0.607154 | 2.1:+73225998 | None:intergenic |
| TTTCCAATAATGAAAGGATG+CGG | 0.608175 | 2.1:+73220422 | None:intergenic |
| AAGTCACTAGCAACCGAGAG+TGG | 0.609058 | 2.1:-73219622 | MS.gene02221:CDS |
| TGTGGATGAAGATAATGCCT+TGG | 0.609887 | 2.1:-73223328 | MS.gene02221:CDS |
| CTCTGCATCATCTTCTCCAG+GGG | 0.613059 | 2.1:+73221786 | None:intergenic |
| GGGATGGAGATTGATGGTGA+TGG | 0.613191 | 2.1:-73226070 | MS.gene02221:CDS |
| GCAATGATATCACCGATGAT+GGG | 0.613735 | 2.1:-73220807 | MS.gene02221:CDS |
| GTACCGCTTCCTATTTGCAA+GGG | 0.614801 | 2.1:+73224669 | None:intergenic |
| CTGATCTGAAGGTTCCTCCA+AGG | 0.616326 | 2.1:+73223311 | None:intergenic |
| TCTTAAAACATTGACTCCTG+AGG | 0.616364 | 2.1:-73219425 | MS.gene02221:CDS |
| ACCTGCAAGACATCCAGATG+CGG | 0.618983 | 2.1:-73220746 | MS.gene02221:CDS |
| AGTACGTAAGTTCTGTGTCA+AGG | 0.622191 | 2.1:-73219488 | MS.gene02221:CDS |
| TGTTCCACAATTGGAAGATG+CGG | 0.622868 | 2.1:-73223826 | MS.gene02221:CDS |
| CCCTGGAGAAGATGATGCAG+AGG | 0.623336 | 2.1:-73221785 | MS.gene02221:CDS |
| AGGCTTATGAGGGTGGTCAA+GGG | 0.628293 | 2.1:-73226090 | MS.gene02221:CDS |
| AAATATTTAAAAGAAGACCA+TGG | 0.628974 | 2.1:-73219744 | MS.gene02221:CDS |
| GTACATCATCACTGCAGTCG+TGG | 0.629610 | 2.1:+73221947 | None:intergenic |
| GTTCAGAAGGCTTATGAGGG+TGG | 0.630689 | 2.1:-73226097 | MS.gene02221:CDS |
| GAAGTTCAGAAGGCTTATGA+GGG | 0.633937 | 2.1:-73226100 | MS.gene02221:CDS |
| TGATGATGCAATGTTCAGGA+TGG | 0.635467 | 2.1:-73220530 | MS.gene02221:CDS |
| AAGCACCATATGCGAATAGG+CGG | 0.636479 | 2.1:+73224776 | None:intergenic |
| GAACTCGTAACTTCTCGTCG+TGG | 0.643517 | 2.1:+73223151 | None:intergenic |
| CTTGCAAAGAGCATTTGATG+TGG | 0.647224 | 2.1:+73223020 | None:intergenic |
| GTGAACACGAGGCTGACAGA+AGG | 0.648318 | 2.1:+73223890 | None:intergenic |
| GGCTCAACGACATCAGCCGA+AGG | 0.649021 | 2.1:+73222937 | None:intergenic |
| TGATCAATAGCAGACCGCAT+AGG | 0.649279 | 2.1:+73221691 | None:intergenic |
| CGCATAGGAGCTGATGACTG+TGG | 0.649317 | 2.1:+73221706 | None:intergenic |
| CAAATGCTCATAAGGGAGAG+GGG | 0.651139 | 2.1:-73222966 | MS.gene02221:CDS |
| AGCAGTGTGTGGGTTAACAA+AGG | 0.656507 | 2.1:+73220143 | None:intergenic |
| GACCGGAAGAGAGAAACTGA+AGG | 0.657617 | 2.1:+73222859 | None:intergenic |
| TCACAATTCAAAACAGAACC+CGG | 0.659461 | 2.1:-73223387 | MS.gene02221:CDS |
| TAGCAACCGAGAGTGGTGAA+GGG | 0.660003 | 2.1:-73219615 | MS.gene02221:CDS |
| CACAGTCATCAGCTCCTATG+CGG | 0.663288 | 2.1:-73221705 | MS.gene02221:CDS |
| AAATAAAGCCAAATACAGCA+TGG | 0.665895 | 2.1:+73219716 | None:intergenic |
| GTCATGAGATGAGAAGAGAA+GGG | 0.666467 | 2.1:+73223692 | None:intergenic |
| TCACCGATGATGGGCTGATG+CGG | 0.668428 | 2.1:-73220798 | MS.gene02221:CDS |
| TGATGATTCAGATAGTGGGA+TGG | 0.668681 | 2.1:-73220554 | MS.gene02221:CDS |
| GGCCAAACACTGTGAACACG+AGG | 0.670920 | 2.1:+73223879 | None:intergenic |
| TGAATCGATTAGGGAAGCGG+CGG | 0.676427 | 2.1:-73226149 | MS.gene02221:CDS |
| TGTGTTTAAGGATTTAGCGG+CGG | 0.680588 | 2.1:-73226176 | MS.gene02221:CDS |
| AGTTGGACGAGAAATTTAGG+TGG | 0.682366 | 2.1:-73223053 | MS.gene02221:CDS |
| ATGTTGGTAGATTCAACTAG+CGG | 0.687387 | 2.1:-73226241 | MS.gene02221:CDS |
| GAAAATTTGACTGTATCACA+AGG | 0.688705 | 2.1:-73223434 | MS.gene02221:CDS |
| CAGGAAGGAGAGGTGATCGG+CGG | 0.689005 | 2.1:+73224027 | None:intergenic |
| GGAAGCTACATTATCCAGAG+AGG | 0.695301 | 2.1:-73222791 | MS.gene02221:intron |
| GAGTACACAGTAAGAACCTG+AGG | 0.695385 | 2.1:+73220180 | None:intergenic |
| TACGAACCCAGATCATTAGG+CGG | 0.700755 | 2.1:+73222916 | None:intergenic |
| TTGGTAGATTCAACTAGCGG+CGG | 0.734446 | 2.1:-73226238 | MS.gene02221:CDS |
| AATCATCAGAATCTTCAGGG+TGG | 0.753774 | 2.1:+73220569 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 73219360 | 73226470 | 73219360 | ID=MS.gene02221 |
| chr2.1 | mRNA | 73219360 | 73226470 | 73219360 | ID=MS.gene02221.t1;Parent=MS.gene02221 |
| chr2.1 | exon | 73225964 | 73226470 | 73225964 | ID=MS.gene02221.t1.exon1;Parent=MS.gene02221.t1 |
| chr2.1 | CDS | 73225964 | 73226470 | 73225964 | ID=cds.MS.gene02221.t1;Parent=MS.gene02221.t1 |
| chr2.1 | exon | 73224908 | 73225033 | 73224908 | ID=MS.gene02221.t1.exon2;Parent=MS.gene02221.t1 |
| chr2.1 | CDS | 73224908 | 73225033 | 73224908 | ID=cds.MS.gene02221.t1;Parent=MS.gene02221.t1 |
| chr2.1 | exon | 73224624 | 73224821 | 73224624 | ID=MS.gene02221.t1.exon3;Parent=MS.gene02221.t1 |
| chr2.1 | CDS | 73224624 | 73224821 | 73224624 | ID=cds.MS.gene02221.t1;Parent=MS.gene02221.t1 |
| chr2.1 | exon | 73224012 | 73224239 | 73224012 | ID=MS.gene02221.t1.exon4;Parent=MS.gene02221.t1 |
| chr2.1 | CDS | 73224012 | 73224239 | 73224012 | ID=cds.MS.gene02221.t1;Parent=MS.gene02221.t1 |
| chr2.1 | exon | 73222792 | 73223919 | 73222792 | ID=MS.gene02221.t1.exon5;Parent=MS.gene02221.t1 |
| chr2.1 | CDS | 73222792 | 73223919 | 73222792 | ID=cds.MS.gene02221.t1;Parent=MS.gene02221.t1 |
| chr2.1 | exon | 73221690 | 73221977 | 73221690 | ID=MS.gene02221.t1.exon6;Parent=MS.gene02221.t1 |
| chr2.1 | CDS | 73221690 | 73221977 | 73221690 | ID=cds.MS.gene02221.t1;Parent=MS.gene02221.t1 |
| chr2.1 | exon | 73220401 | 73220845 | 73220401 | ID=MS.gene02221.t1.exon7;Parent=MS.gene02221.t1 |
| chr2.1 | CDS | 73220401 | 73220845 | 73220401 | ID=cds.MS.gene02221.t1;Parent=MS.gene02221.t1 |
| chr2.1 | exon | 73219360 | 73220207 | 73219360 | ID=MS.gene02221.t1.exon8;Parent=MS.gene02221.t1 |
| chr2.1 | CDS | 73219360 | 73220207 | 73219360 | ID=cds.MS.gene02221.t1;Parent=MS.gene02221.t1 |
| Gene Sequence |
| Protein sequence |