Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023023.t1 | XP_013448512.1 | 98.9 | 459 | 5 | 0 | 1 | 459 | 1 | 459 | 8.60E-253 | 882.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023023.t1 | Q9SRT0 | 49.4 | 464 | 226 | 5 | 1 | 459 | 1 | 460 | 2.2e-108 | 394.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023023.t1 | A0A072TYF9 | 98.9 | 459 | 5 | 0 | 1 | 459 | 1 | 459 | 6.2e-253 | 882.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene023023 | MS.gene016580 | PPI |
MS.gene023023 | MS.gene61746 | PPI |
MS.gene88463 | MS.gene023023 | PPI |
MS.gene61080 | MS.gene023023 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023023.t1 | MTR_7g053260 | 98.911 | 459 | 5 | 0 | 1 | 459 | 1 | 459 | 0.0 | 928 |
MS.gene023023.t1 | MTR_7g116600 | 55.580 | 457 | 190 | 4 | 14 | 459 | 6 | 460 | 4.64e-164 | 471 |
MS.gene023023.t1 | MTR_1g079450 | 48.753 | 441 | 215 | 6 | 21 | 457 | 11 | 444 | 2.06e-124 | 369 |
MS.gene023023.t1 | MTR_4g485520 | 38.250 | 400 | 231 | 9 | 62 | 452 | 89 | 481 | 5.44e-85 | 269 |
MS.gene023023.t1 | MTR_4g485520 | 38.250 | 400 | 231 | 9 | 62 | 452 | 257 | 649 | 5.21e-83 | 269 |
MS.gene023023.t1 | MTR_4g063800 | 39.005 | 382 | 219 | 8 | 78 | 452 | 255 | 629 | 1.45e-79 | 260 |
MS.gene023023.t1 | MTR_1g094215 | 37.472 | 443 | 260 | 9 | 20 | 452 | 3 | 438 | 3.82e-76 | 245 |
MS.gene023023.t1 | MTR_1g094215 | 36.717 | 463 | 268 | 10 | 8 | 452 | 166 | 621 | 1.95e-74 | 246 |
MS.gene023023.t1 | MTR_7g078330 | 36.053 | 380 | 232 | 8 | 75 | 451 | 271 | 642 | 3.12e-64 | 219 |
MS.gene023023.t1 | MTR_7g059405 | 35.958 | 381 | 221 | 9 | 79 | 449 | 265 | 632 | 1.43e-63 | 217 |
MS.gene023023.t1 | MTR_5g083030 | 34.559 | 408 | 234 | 14 | 76 | 457 | 291 | 691 | 6.63e-57 | 200 |
MS.gene023023.t1 | MTR_2g018010 | 33.586 | 396 | 239 | 11 | 76 | 454 | 290 | 678 | 6.41e-54 | 192 |
MS.gene023023.t1 | MTR_4g028960 | 32.759 | 406 | 251 | 11 | 64 | 451 | 264 | 665 | 3.42e-46 | 170 |
MS.gene023023.t1 | MTR_4g107010 | 27.595 | 395 | 266 | 7 | 72 | 450 | 274 | 664 | 3.72e-39 | 150 |
MS.gene023023.t1 | MTR_3g078160 | 28.940 | 349 | 226 | 7 | 75 | 408 | 272 | 613 | 6.11e-39 | 149 |
MS.gene023023.t1 | MTR_3g078160 | 28.940 | 349 | 226 | 7 | 75 | 408 | 272 | 613 | 7.25e-39 | 149 |
MS.gene023023.t1 | MTR_5g034440 | 29.949 | 394 | 243 | 12 | 80 | 450 | 282 | 665 | 8.11e-37 | 144 |
MS.gene023023.t1 | MTR_1g018180 | 35.273 | 275 | 167 | 7 | 180 | 451 | 70 | 336 | 2.19e-35 | 134 |
MS.gene023023.t1 | MTR_3g466220 | 35.971 | 278 | 169 | 7 | 174 | 449 | 555 | 825 | 4.79e-35 | 139 |
MS.gene023023.t1 | MTR_3g466220 | 38.994 | 159 | 80 | 4 | 1 | 156 | 167 | 311 | 1.18e-22 | 101 |
MS.gene023023.t1 | MTR_3g466220 | 35.971 | 278 | 169 | 7 | 174 | 449 | 534 | 804 | 5.60e-35 | 139 |
MS.gene023023.t1 | MTR_3g466220 | 38.994 | 159 | 80 | 4 | 1 | 156 | 146 | 290 | 1.34e-22 | 101 |
MS.gene023023.t1 | MTR_1g069845 | 33.904 | 292 | 181 | 8 | 159 | 446 | 309 | 592 | 6.55e-35 | 137 |
MS.gene023023.t1 | MTR_1g069845 | 41.905 | 105 | 54 | 1 | 40 | 144 | 93 | 190 | 1.56e-21 | 97.8 |
MS.gene023023.t1 | MTR_1g069845 | 33.559 | 295 | 184 | 8 | 159 | 449 | 426 | 712 | 2.17e-34 | 137 |
MS.gene023023.t1 | MTR_1g069845 | 41.905 | 105 | 54 | 1 | 40 | 144 | 210 | 307 | 2.60e-21 | 97.4 |
MS.gene023023.t1 | MTR_1g069845 | 33.904 | 292 | 181 | 8 | 159 | 446 | 430 | 713 | 2.41e-34 | 136 |
MS.gene023023.t1 | MTR_1g069845 | 41.905 | 105 | 54 | 1 | 40 | 144 | 214 | 311 | 2.52e-21 | 97.4 |
MS.gene023023.t1 | MTR_2g011140 | 29.155 | 367 | 218 | 14 | 80 | 435 | 17 | 352 | 1.04e-32 | 128 |
MS.gene023023.t1 | MTR_7g097020 | 33.893 | 298 | 188 | 7 | 154 | 449 | 464 | 754 | 6.25e-32 | 129 |
MS.gene023023.t1 | MTR_7g097020 | 35.252 | 139 | 80 | 2 | 14 | 152 | 187 | 315 | 1.21e-20 | 95.5 |
MS.gene023023.t1 | MTR_3g078160 | 30.370 | 270 | 171 | 5 | 75 | 333 | 272 | 535 | 4.13e-31 | 126 |
MS.gene023023.t1 | MTR_3g103050 | 31.900 | 279 | 185 | 4 | 175 | 451 | 55 | 330 | 2.00e-30 | 120 |
MS.gene023023.t1 | MTR_4g091880 | 27.970 | 404 | 228 | 15 | 78 | 452 | 5 | 374 | 4.05e-27 | 112 |
MS.gene023023.t1 | MTR_4g091880 | 25.385 | 390 | 228 | 12 | 78 | 452 | 5 | 346 | 1.23e-26 | 110 |
MS.gene023023.t1 | MTR_8g080280 | 24.724 | 453 | 258 | 15 | 66 | 446 | 264 | 705 | 1.53e-26 | 113 |
MS.gene023023.t1 | MTR_3g085610 | 23.380 | 432 | 258 | 12 | 79 | 446 | 281 | 703 | 2.92e-25 | 109 |
MS.gene023023.t1 | MTR_1g093965 | 29.707 | 239 | 115 | 6 | 91 | 329 | 1 | 186 | 5.17e-24 | 99.8 |
MS.gene023023.t1 | MTR_5g020570 | 25.446 | 448 | 234 | 16 | 63 | 446 | 251 | 662 | 4.91e-23 | 102 |
MS.gene023023.t1 | MTR_5g020570 | 25.446 | 448 | 234 | 16 | 63 | 446 | 266 | 677 | 6.25e-23 | 102 |
MS.gene023023.t1 | MTR_1g093995 | 29.289 | 239 | 116 | 6 | 91 | 329 | 1 | 186 | 1.13e-22 | 95.9 |
MS.gene023023.t1 | MTR_3g078340 | 29.032 | 279 | 187 | 6 | 175 | 449 | 214 | 485 | 1.30e-22 | 100 |
MS.gene023023.t1 | MTR_4g085720 | 26.087 | 391 | 267 | 10 | 72 | 449 | 8 | 389 | 3.02e-22 | 99.0 |
MS.gene023023.t1 | MTR_2g026130 | 30.496 | 282 | 183 | 8 | 173 | 450 | 177 | 449 | 1.09e-20 | 94.7 |
MS.gene023023.t1 | MTR_5g048050 | 36.885 | 122 | 62 | 2 | 73 | 179 | 20 | 141 | 2.35e-20 | 93.6 |
MS.gene023023.t1 | MTR_8g077205 | 46.835 | 79 | 42 | 0 | 76 | 154 | 273 | 351 | 3.54e-20 | 94.0 |
MS.gene023023.t1 | MTR_8g077205 | 46.835 | 79 | 42 | 0 | 76 | 154 | 161 | 239 | 4.02e-20 | 93.6 |
MS.gene023023.t1 | MTR_3g065080 | 52.174 | 69 | 33 | 0 | 76 | 144 | 34 | 102 | 8.85e-20 | 91.7 |
MS.gene023023.t1 | MTR_5g015210 | 25.816 | 337 | 226 | 10 | 79 | 407 | 68 | 388 | 9.70e-20 | 91.7 |
MS.gene023023.t1 | MTR_6g071340 | 36.134 | 119 | 61 | 2 | 76 | 179 | 3 | 121 | 1.27e-19 | 91.3 |
MS.gene023023.t1 | MTR_8g092870 | 25.628 | 398 | 269 | 10 | 76 | 452 | 8 | 399 | 1.78e-18 | 87.8 |
MS.gene023023.t1 | MTR_3g096370 | 44.595 | 74 | 41 | 0 | 71 | 144 | 3 | 76 | 4.19e-18 | 86.3 |
MS.gene023023.t1 | MTR_1g017770 | 27.727 | 220 | 141 | 5 | 79 | 294 | 46 | 251 | 1.49e-17 | 85.1 |
MS.gene023023.t1 | MTR_7g117890 | 29.224 | 219 | 126 | 8 | 82 | 296 | 259 | 452 | 3.03e-17 | 85.1 |
MS.gene023023.t1 | MTR_5g077510 | 42.029 | 69 | 40 | 0 | 76 | 144 | 33 | 101 | 1.84e-16 | 81.6 |
MS.gene023023.t1 | MTR_6g008170 | 27.354 | 223 | 158 | 3 | 226 | 446 | 289 | 509 | 1.86e-16 | 82.0 |
MS.gene023023.t1 | MTR_1g056880 | 43.038 | 79 | 39 | 2 | 72 | 144 | 1 | 79 | 2.34e-16 | 81.3 |
MS.gene023023.t1 | MTR_7g106340 | 47.561 | 82 | 37 | 3 | 76 | 151 | 6 | 87 | 4.08e-16 | 80.5 |
MS.gene023023.t1 | MTR_1g056840 | 43.038 | 79 | 39 | 2 | 72 | 144 | 1 | 79 | 6.08e-16 | 80.1 |
MS.gene023023.t1 | MTR_3g095730 | 44.286 | 70 | 39 | 0 | 76 | 145 | 11 | 80 | 6.46e-16 | 79.7 |
MS.gene023023.t1 | MTR_1g056870 | 43.038 | 79 | 39 | 2 | 72 | 144 | 1 | 79 | 6.62e-16 | 80.1 |
MS.gene023023.t1 | MTR_3g115670 | 25.649 | 308 | 193 | 10 | 62 | 337 | 14 | 317 | 5.94e-15 | 77.8 |
MS.gene023023.t1 | MTR_8g027140 | 24.260 | 338 | 223 | 10 | 82 | 391 | 263 | 595 | 3.64e-14 | 75.5 |
MS.gene023023.t1 | MTR_4g051515 | 26.010 | 396 | 218 | 17 | 76 | 404 | 4 | 391 | 2.13e-13 | 72.0 |
MS.gene023023.t1 | MTR_2g087350 | 43.836 | 73 | 37 | 2 | 76 | 144 | 4 | 76 | 2.29e-13 | 72.0 |
MS.gene023023.t1 | MTR_1g090320 | 41.250 | 80 | 45 | 2 | 79 | 157 | 514 | 592 | 2.57e-13 | 73.2 |
MS.gene023023.t1 | MTR_1g090320 | 41.250 | 80 | 45 | 2 | 79 | 157 | 516 | 594 | 2.69e-13 | 72.8 |
MS.gene023023.t1 | MTR_5g032010 | 40.909 | 66 | 39 | 0 | 79 | 144 | 733 | 798 | 1.44e-12 | 70.5 |
MS.gene023023.t1 | MTR_7g077780 | 35.632 | 87 | 56 | 0 | 58 | 144 | 806 | 892 | 1.74e-12 | 70.1 |
MS.gene023023.t1 | MTR_1g056910 | 47.059 | 68 | 34 | 2 | 79 | 144 | 7 | 74 | 2.81e-12 | 68.6 |
MS.gene023023.t1 | MTR_7g005940 | 40.580 | 69 | 40 | 1 | 77 | 144 | 594 | 662 | 5.94e-12 | 68.6 |
MS.gene023023.t1 | MTR_7g005940 | 40.580 | 69 | 40 | 1 | 77 | 144 | 594 | 662 | 5.98e-12 | 68.6 |
MS.gene023023.t1 | MTR_2g096850 | 46.970 | 66 | 35 | 0 | 79 | 144 | 590 | 655 | 7.44e-12 | 67.8 |
MS.gene023023.t1 | MTR_2g096850 | 46.970 | 66 | 35 | 0 | 79 | 144 | 741 | 806 | 8.97e-12 | 67.8 |
MS.gene023023.t1 | MTR_1g100820 | 39.706 | 68 | 41 | 0 | 79 | 146 | 649 | 716 | 3.43e-11 | 65.9 |
MS.gene023023.t1 | MTR_1g100820 | 39.706 | 68 | 41 | 0 | 79 | 146 | 647 | 714 | 3.46e-11 | 65.9 |
MS.gene023023.t1 | MTR_8g103227 | 40.580 | 69 | 40 | 1 | 77 | 144 | 394 | 462 | 3.51e-11 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene023023.t1 | AT3G07360 | 57.974 | 464 | 186 | 5 | 1 | 459 | 1 | 460 | 0.0 | 521 |
MS.gene023023.t1 | AT3G07360 | 59.692 | 325 | 126 | 3 | 140 | 459 | 1 | 325 | 2.48e-124 | 365 |
MS.gene023023.t1 | AT3G07360 | 59.692 | 325 | 126 | 3 | 140 | 459 | 1 | 325 | 2.48e-124 | 365 |
MS.gene023023.t1 | AT3G07360 | 59.692 | 325 | 126 | 3 | 140 | 459 | 1 | 325 | 2.48e-124 | 365 |
MS.gene023023.t1 | AT3G07360 | 59.692 | 325 | 126 | 3 | 140 | 459 | 1 | 325 | 2.48e-124 | 365 |
MS.gene023023.t1 | AT3G07360 | 59.692 | 325 | 126 | 3 | 140 | 459 | 1 | 325 | 2.48e-124 | 365 |
MS.gene023023.t1 | AT3G07360 | 59.692 | 325 | 126 | 3 | 140 | 459 | 1 | 325 | 2.48e-124 | 365 |
MS.gene023023.t1 | AT3G07360 | 59.692 | 325 | 126 | 3 | 140 | 459 | 1 | 325 | 2.48e-124 | 365 |
MS.gene023023.t1 | AT3G07360 | 59.692 | 325 | 126 | 3 | 140 | 459 | 1 | 325 | 2.48e-124 | 365 |
MS.gene023023.t1 | AT3G07360 | 59.692 | 325 | 126 | 3 | 140 | 459 | 1 | 325 | 2.48e-124 | 365 |
MS.gene023023.t1 | AT5G18320 | 42.982 | 456 | 220 | 12 | 21 | 453 | 12 | 450 | 6.64e-100 | 307 |
MS.gene023023.t1 | AT1G23030 | 38.718 | 390 | 226 | 8 | 66 | 451 | 229 | 609 | 1.49e-80 | 261 |
MS.gene023023.t1 | AT3G54850 | 36.575 | 473 | 272 | 11 | 6 | 458 | 165 | 629 | 2.54e-80 | 261 |
MS.gene023023.t1 | AT5G18340 | 38.901 | 455 | 234 | 14 | 19 | 447 | 16 | 452 | 5.44e-80 | 255 |
MS.gene023023.t1 | AT3G46510 | 36.952 | 433 | 247 | 11 | 27 | 452 | 217 | 630 | 3.61e-77 | 253 |
MS.gene023023.t1 | AT1G71020 | 37.221 | 403 | 235 | 10 | 60 | 451 | 77 | 472 | 1.32e-76 | 247 |
MS.gene023023.t1 | AT1G71020 | 37.221 | 403 | 235 | 10 | 60 | 451 | 225 | 620 | 7.38e-75 | 247 |
MS.gene023023.t1 | AT2G28830 | 38.120 | 383 | 222 | 7 | 79 | 451 | 185 | 562 | 2.51e-74 | 244 |
MS.gene023023.t1 | AT5G18330 | 37.018 | 389 | 226 | 7 | 76 | 451 | 63 | 445 | 2.70e-65 | 217 |
MS.gene023023.t1 | AT5G42340 | 34.961 | 389 | 234 | 10 | 72 | 451 | 278 | 656 | 2.41e-58 | 203 |
MS.gene023023.t1 | AT5G01830 | 28.913 | 460 | 286 | 15 | 12 | 451 | 207 | 645 | 1.19e-44 | 166 |
MS.gene023023.t1 | AT1G29340 | 31.486 | 397 | 239 | 13 | 76 | 451 | 303 | 687 | 6.46e-43 | 161 |
MS.gene023023.t1 | AT2G23140 | 36.496 | 274 | 165 | 7 | 175 | 446 | 357 | 623 | 3.59e-39 | 150 |
MS.gene023023.t1 | AT2G23140 | 53.125 | 64 | 30 | 0 | 81 | 144 | 44 | 107 | 8.09e-19 | 89.7 |
MS.gene023023.t1 | AT2G23140 | 36.496 | 274 | 165 | 7 | 175 | 446 | 357 | 623 | 3.59e-39 | 150 |
MS.gene023023.t1 | AT2G23140 | 53.125 | 64 | 30 | 0 | 81 | 144 | 44 | 107 | 8.09e-19 | 89.7 |
MS.gene023023.t1 | AT2G23140 | 36.496 | 274 | 165 | 7 | 175 | 446 | 549 | 815 | 5.37e-39 | 150 |
MS.gene023023.t1 | AT2G23140 | 34.899 | 149 | 79 | 4 | 7 | 152 | 174 | 307 | 8.86e-19 | 89.7 |
MS.gene023023.t1 | AT2G23140 | 36.496 | 274 | 165 | 7 | 175 | 446 | 546 | 812 | 6.14e-39 | 150 |
MS.gene023023.t1 | AT2G23140 | 34.899 | 149 | 79 | 4 | 7 | 152 | 171 | 304 | 9.00e-19 | 89.7 |
MS.gene023023.t1 | AT2G23140 | 36.496 | 274 | 165 | 7 | 175 | 446 | 546 | 812 | 6.14e-39 | 150 |
MS.gene023023.t1 | AT2G23140 | 34.899 | 149 | 79 | 4 | 7 | 152 | 171 | 304 | 9.00e-19 | 89.7 |
MS.gene023023.t1 | AT5G67340 | 27.542 | 472 | 243 | 14 | 76 | 454 | 238 | 703 | 4.20e-38 | 147 |
MS.gene023023.t1 | AT5G67340 | 27.542 | 472 | 243 | 14 | 76 | 454 | 238 | 703 | 4.20e-38 | 147 |
MS.gene023023.t1 | AT3G01400 | 33.562 | 292 | 184 | 7 | 170 | 459 | 65 | 348 | 1.67e-35 | 135 |
MS.gene023023.t1 | AT4G21350 | 30.347 | 346 | 227 | 9 | 78 | 420 | 5 | 339 | 4.84e-33 | 129 |
MS.gene023023.t1 | AT5G58680 | 34.545 | 275 | 170 | 7 | 180 | 451 | 72 | 339 | 4.51e-31 | 123 |
MS.gene023023.t1 | AT1G60190 | 26.382 | 398 | 252 | 14 | 80 | 450 | 280 | 663 | 7.87e-30 | 123 |
MS.gene023023.t1 | AT3G54790 | 36.406 | 217 | 133 | 5 | 232 | 446 | 495 | 708 | 8.52e-28 | 117 |
MS.gene023023.t1 | AT3G54790 | 49.333 | 75 | 38 | 0 | 70 | 144 | 194 | 268 | 9.60e-21 | 95.9 |
MS.gene023023.t1 | AT3G54790 | 36.406 | 217 | 133 | 5 | 232 | 446 | 531 | 744 | 9.91e-28 | 117 |
MS.gene023023.t1 | AT3G54790 | 49.333 | 75 | 38 | 0 | 70 | 144 | 230 | 304 | 1.29e-20 | 95.5 |
MS.gene023023.t1 | AT3G54790 | 36.406 | 217 | 133 | 5 | 232 | 446 | 531 | 744 | 9.91e-28 | 117 |
MS.gene023023.t1 | AT3G54790 | 49.333 | 75 | 38 | 0 | 70 | 144 | 230 | 304 | 1.29e-20 | 95.5 |
MS.gene023023.t1 | AT3G19380 | 28.056 | 360 | 222 | 14 | 72 | 407 | 8 | 354 | 1.05e-27 | 114 |
MS.gene023023.t1 | AT1G10560 | 26.718 | 393 | 258 | 14 | 80 | 450 | 290 | 674 | 9.47e-27 | 114 |
MS.gene023023.t1 | AT1G49780 | 26.303 | 403 | 262 | 11 | 72 | 450 | 8 | 399 | 1.37e-25 | 108 |
MS.gene023023.t1 | AT1G27910 | 27.113 | 284 | 147 | 9 | 79 | 307 | 280 | 558 | 1.28e-23 | 104 |
MS.gene023023.t1 | AT5G40140 | 27.477 | 222 | 158 | 2 | 231 | 450 | 286 | 506 | 6.07e-22 | 99.0 |
MS.gene023023.t1 | AT1G66160 | 53.623 | 69 | 32 | 0 | 76 | 144 | 31 | 99 | 4.06e-21 | 95.9 |
MS.gene023023.t1 | AT5G37490 | 48.148 | 81 | 42 | 0 | 76 | 156 | 29 | 109 | 1.21e-20 | 94.4 |
MS.gene023023.t1 | AT1G67530 | 47.297 | 74 | 39 | 0 | 79 | 152 | 273 | 346 | 1.89e-19 | 91.3 |
MS.gene023023.t1 | AT1G24330 | 47.222 | 72 | 38 | 0 | 79 | 150 | 276 | 347 | 1.90e-19 | 92.0 |
MS.gene023023.t1 | AT1G24330 | 47.222 | 72 | 38 | 0 | 79 | 150 | 276 | 347 | 1.90e-19 | 92.0 |
MS.gene023023.t1 | AT1G67530 | 47.297 | 74 | 39 | 0 | 79 | 152 | 273 | 346 | 2.08e-19 | 91.7 |
MS.gene023023.t1 | AT1G67530 | 47.297 | 74 | 39 | 0 | 79 | 152 | 273 | 346 | 2.08e-19 | 91.7 |
MS.gene023023.t1 | AT1G67530 | 47.297 | 74 | 39 | 0 | 79 | 152 | 273 | 346 | 2.08e-19 | 91.7 |
MS.gene023023.t1 | AT5G62560 | 29.091 | 220 | 150 | 4 | 231 | 446 | 292 | 509 | 3.10e-19 | 90.9 |
MS.gene023023.t1 | AT4G16490 | 31.206 | 282 | 183 | 8 | 173 | 450 | 187 | 461 | 3.72e-19 | 90.1 |
MS.gene023023.t1 | AT5G65200 | 26.882 | 279 | 186 | 6 | 180 | 447 | 235 | 506 | 3.23e-18 | 87.8 |
MS.gene023023.t1 | AT5G65920 | 25.588 | 340 | 197 | 11 | 78 | 414 | 60 | 346 | 3.28e-18 | 87.0 |
MS.gene023023.t1 | AT5G65920 | 25.588 | 340 | 197 | 11 | 78 | 414 | 60 | 346 | 3.28e-18 | 87.0 |
MS.gene023023.t1 | AT2G35930 | 25.357 | 280 | 197 | 6 | 72 | 345 | 6 | 279 | 9.51e-18 | 85.5 |
MS.gene023023.t1 | AT5G64660 | 45.714 | 70 | 38 | 0 | 76 | 145 | 8 | 77 | 2.02e-17 | 84.7 |
MS.gene023023.t1 | AT3G18710 | 45.946 | 74 | 40 | 0 | 76 | 149 | 10 | 83 | 3.99e-17 | 83.6 |
MS.gene023023.t1 | AT3G52450 | 44.595 | 74 | 40 | 1 | 72 | 144 | 1 | 74 | 5.06e-17 | 83.6 |
MS.gene023023.t1 | AT3G47820 | 26.838 | 272 | 186 | 7 | 185 | 449 | 221 | 486 | 1.04e-16 | 82.8 |
MS.gene023023.t1 | AT5G09800 | 46.377 | 69 | 37 | 0 | 77 | 145 | 10 | 78 | 8.20e-16 | 79.7 |
MS.gene023023.t1 | AT4G36550 | 42.308 | 78 | 45 | 0 | 75 | 152 | 216 | 293 | 1.17e-15 | 80.1 |
MS.gene023023.t1 | AT3G49810 | 24.601 | 313 | 181 | 8 | 78 | 387 | 64 | 324 | 9.96e-15 | 76.6 |
MS.gene023023.t1 | AT1G76390 | 23.562 | 365 | 223 | 13 | 62 | 384 | 10 | 360 | 1.06e-13 | 73.9 |
MS.gene023023.t1 | AT1G76390 | 23.562 | 365 | 223 | 13 | 62 | 384 | 10 | 360 | 1.06e-13 | 73.9 |
MS.gene023023.t1 | AT1G01680 | 43.077 | 65 | 37 | 0 | 80 | 144 | 235 | 299 | 4.95e-13 | 70.1 |
MS.gene023023.t1 | AT5G57035 | 35.000 | 100 | 65 | 0 | 58 | 157 | 688 | 787 | 8.04e-13 | 71.2 |
MS.gene023023.t1 | AT1G01660 | 40.909 | 66 | 39 | 0 | 79 | 144 | 499 | 564 | 8.78e-13 | 70.9 |
MS.gene023023.t1 | AT1G01660 | 40.909 | 66 | 39 | 0 | 79 | 144 | 498 | 563 | 8.85e-13 | 70.9 |
MS.gene023023.t1 | AT2G45910 | 34.862 | 109 | 69 | 1 | 36 | 144 | 723 | 829 | 1.59e-12 | 70.5 |
MS.gene023023.t1 | AT2G45910 | 34.862 | 109 | 69 | 1 | 36 | 144 | 723 | 829 | 1.59e-12 | 70.5 |
MS.gene023023.t1 | AT2G45920 | 30.952 | 126 | 71 | 2 | 28 | 144 | 273 | 391 | 2.65e-12 | 68.6 |
MS.gene023023.t1 | AT1G20780 | 22.255 | 337 | 227 | 9 | 80 | 384 | 25 | 358 | 8.05e-12 | 68.2 |
MS.gene023023.t1 | AT1G20780 | 22.255 | 337 | 227 | 9 | 80 | 384 | 25 | 358 | 8.05e-12 | 68.2 |
MS.gene023023.t1 | AT1G20780 | 22.255 | 337 | 227 | 9 | 80 | 384 | 25 | 358 | 8.05e-12 | 68.2 |
MS.gene023023.t1 | AT3G61390 | 40.909 | 66 | 39 | 0 | 79 | 144 | 279 | 344 | 8.11e-12 | 67.0 |
MS.gene023023.t1 | AT3G61390 | 40.909 | 66 | 39 | 0 | 79 | 144 | 354 | 419 | 9.59e-12 | 67.0 |
MS.gene023023.t1 | AT3G11840 | 44.286 | 70 | 37 | 2 | 76 | 144 | 8 | 76 | 1.24e-11 | 67.0 |
MS.gene023023.t1 | AT5G65500 | 39.394 | 66 | 40 | 0 | 79 | 144 | 716 | 781 | 1.32e-11 | 67.4 |
MS.gene023023.t1 | AT5G65500 | 39.394 | 66 | 40 | 0 | 79 | 144 | 724 | 789 | 1.41e-11 | 67.4 |
MS.gene023023.t1 | AT1G56040 | 41.538 | 65 | 38 | 0 | 79 | 143 | 354 | 418 | 3.73e-11 | 65.1 |
MS.gene023023.t1 | AT1G56030 | 41.538 | 65 | 38 | 0 | 79 | 143 | 324 | 388 | 5.07e-11 | 64.7 |
Find 70 sgRNAs with CRISPR-Local
Find 135 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTCTATCATTTCTCTTATA+AGG | 0.197429 | 7.2:-49921083 | None:intergenic |
GATCCTGTCATTGTTGCTTC+TGG | 0.279652 | 7.2:+49919710 | MS.gene023023:CDS |
CAACTCCTTCTTCAACTCTA+AGG | 0.282213 | 7.2:-49919486 | None:intergenic |
ATACTATCTCCTTCACAAAT+TGG | 0.282392 | 7.2:-49921336 | None:intergenic |
ATTTCTCTTATAAGGTGATT+TGG | 0.300937 | 7.2:-49921075 | None:intergenic |
ATCATAAACATGGCAAAATC+AGG | 0.306644 | 7.2:+49919425 | None:intergenic |
TCACATCTTCTTGAAGTTCA+TGG | 0.317630 | 7.2:-49921362 | None:intergenic |
GATGGTTTAATGCTGGAAAT+AGG | 0.321814 | 7.2:+49921007 | MS.gene023023:CDS |
AGTGGACATTTGAATTCATC+TGG | 0.326095 | 7.2:-49919668 | None:intergenic |
GCTTTCTTCAACATAACTTC+TGG | 0.328306 | 7.2:-49919464 | None:intergenic |
CGGTGCGGTTAGAGTGATTA+TGG | 0.334739 | 7.2:+49921692 | MS.gene023023:CDS |
ATCCAAGTTGAGGGAAATAA+AGG | 0.367050 | 7.2:+49921911 | MS.gene023023:CDS |
AAAACCGCTTATCGACCTAT+TGG | 0.373774 | 7.2:+49921578 | MS.gene023023:CDS |
CAAATTGGCTTAAGCAATTG+AGG | 0.379491 | 7.2:-49921321 | None:intergenic |
AGGGATTCCCTTCTTCCAAT+AGG | 0.395833 | 7.2:-49921593 | None:intergenic |
TTCCTTTATTTCCCTCAACT+TGG | 0.403611 | 7.2:-49921913 | None:intergenic |
CTCCAAGCTCTGCCATTTCA+AGG | 0.408039 | 7.2:-49921791 | None:intergenic |
TGTCATTGTTGCTTCTGGTC+AGG | 0.408833 | 7.2:+49919715 | MS.gene023023:CDS |
CATAAAGACATATAGTTTGA+AGG | 0.418853 | 7.2:-49921884 | None:intergenic |
GAGCTCGTGTGAACGCAATA+AGG | 0.419696 | 7.2:+49921845 | MS.gene023023:CDS |
ATTCAAAGATGGTTTAATGC+TGG | 0.420712 | 7.2:+49921000 | MS.gene023023:CDS |
CTCAATGCCTTCATGAGGAT+TGG | 0.426057 | 7.2:-49921456 | None:intergenic |
CGCATAATGCTTAGCAAACA+AGG | 0.449211 | 7.2:-49921819 | None:intergenic |
CTAGTGCTGATAACGTGAAA+AGG | 0.450231 | 7.2:-49921518 | None:intergenic |
ATTAGTTACATTAGCGATGA+AGG | 0.450519 | 7.2:+49921144 | MS.gene023023:CDS |
AGGATCTCTCATAAATTCCT+TGG | 0.453978 | 7.2:-49919693 | None:intergenic |
GAAAAGGGTTGCTGCAGCAT+TGG | 0.459856 | 7.2:-49921502 | None:intergenic |
TCAGAAGGCTGTCCTTGAAA+TGG | 0.461901 | 7.2:+49921779 | MS.gene023023:CDS |
GTCCTTGAAATGGCAGAGCT+TGG | 0.465269 | 7.2:+49921789 | MS.gene023023:CDS |
ATGAGGATTGGAATTACCAT+TGG | 0.468277 | 7.2:-49921444 | None:intergenic |
TTAAACCATCTTTGAATGAA+AGG | 0.473997 | 7.2:-49920994 | None:intergenic |
ATAGACCTTTCATTCAAAGA+TGG | 0.475990 | 7.2:+49920989 | MS.gene023023:CDS |
CTCATAAATTCCTTGGAAAG+TGG | 0.479852 | 7.2:-49919686 | None:intergenic |
CCTTCTGATGAGTCGAAAGT+AGG | 0.486238 | 7.2:-49921764 | None:intergenic |
AGCAACATCCTTCATAGCTA+AGG | 0.487743 | 7.2:-49921613 | None:intergenic |
AGGGAATCCCTTAGCTATGA+AGG | 0.488930 | 7.2:+49921605 | MS.gene023023:CDS |
GAGAGAACTTGATGAGTTTG+AGG | 0.500944 | 7.2:-49921036 | None:intergenic |
GACTCAAACAAAGAGCTCAT+AGG | 0.501869 | 7.2:+49921540 | MS.gene023023:CDS |
GAAAGCCTTAGAGTTGAAGA+AGG | 0.502406 | 7.2:+49919481 | MS.gene023023:CDS |
GTGATTCGTCGACGTGAACT+CGG | 0.504524 | 7.2:-49921728 | None:intergenic |
ATTCAAATGTCCACTTTCCA+AGG | 0.523076 | 7.2:+49919676 | MS.gene023023:CDS |
CTTATCGACCTATTGGAAGA+AGG | 0.525124 | 7.2:+49921585 | MS.gene023023:CDS |
GTTGAGGGAAATAAAGGAAG+AGG | 0.528465 | 7.2:+49921917 | MS.gene023023:CDS |
TAGTGCTGATAACGTGAAAA+GGG | 0.532860 | 7.2:-49921517 | None:intergenic |
TGACCAGAAGCAACAATGAC+AGG | 0.534069 | 7.2:-49919713 | None:intergenic |
TCATAAACATGGCAAAATCA+GGG | 0.534668 | 7.2:+49919426 | None:intergenic |
TTATGATAGATCCAAGTTGA+GGG | 0.541455 | 7.2:+49921902 | MS.gene023023:CDS |
CTTCTGATGAGTCGAAAGTA+GGG | 0.555075 | 7.2:-49921763 | None:intergenic |
TTTATGATAGATCCAAGTTG+AGG | 0.556104 | 7.2:+49921901 | MS.gene023023:CDS |
TTGCTTAAGCCAATTTGTGA+AGG | 0.557316 | 7.2:+49921327 | MS.gene023023:CDS |
GGTAATTCCAATCCTCATGA+AGG | 0.566880 | 7.2:+49921449 | MS.gene023023:CDS |
GCAACATCCTTCATAGCTAA+GGG | 0.568346 | 7.2:-49921612 | None:intergenic |
TTATCGACCTATTGGAAGAA+GGG | 0.569945 | 7.2:+49921586 | MS.gene023023:CDS |
GTGGACATTTGAATTCATCT+GGG | 0.582625 | 7.2:-49919667 | None:intergenic |
AATTCTTGAGAGACTGCATA+GGG | 0.582826 | 7.2:+49922010 | MS.gene023023:CDS |
CCTACTTTCGACTCATCAGA+AGG | 0.583772 | 7.2:+49921764 | MS.gene023023:CDS |
CTCATGAAGGCATTGAGATG+TGG | 0.589595 | 7.2:+49921462 | MS.gene023023:CDS |
TATATCTTCATCATCAACAA+TGG | 0.590547 | 7.2:-49919525 | None:intergenic |
CACATCTCAATGCCTTCATG+AGG | 0.603776 | 7.2:-49921461 | None:intergenic |
GAATTCTTGAGAGACTGCAT+AGG | 0.617958 | 7.2:+49922009 | MS.gene023023:CDS |
ACAAGTGGCTGAAATTCCAA+TGG | 0.623306 | 7.2:+49921428 | MS.gene023023:CDS |
TGACAACAACAAGAAACAAG+TGG | 0.636281 | 7.2:+49921413 | MS.gene023023:CDS |
AGGGCTAAGAGAAAAGCTAG+TGG | 0.642044 | 7.2:+49921987 | MS.gene023023:CDS |
ATGTGGAACAATCGAAACAC+GGG | 0.642812 | 7.2:+49921479 | MS.gene023023:CDS |
GATGTGGAACAATCGAAACA+CGG | 0.647457 | 7.2:+49921478 | MS.gene023023:CDS |
CATAAACATGGCAAAATCAG+GGG | 0.649317 | 7.2:+49919427 | None:intergenic |
GATGAGTCGAAAGTAGGGCA+AGG | 0.653116 | 7.2:-49921758 | None:intergenic |
TCTTCCAATAGGTCGATAAG+CGG | 0.656229 | 7.2:-49921582 | None:intergenic |
AAAGCAATAGCAGTGAAAGA+CGG | 0.662494 | 7.2:+49921672 | MS.gene023023:CDS |
AATAGCAGTGAAAGACGGTG+CGG | 0.724317 | 7.2:+49921677 | MS.gene023023:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTGAATTAAAATTAACTAA+AGG | + | chr7.2:49919993-49920012 | MS.gene023023:intron | 10.0% |
!! | TTGAATTAAAATTAACTAAA+GGG | + | chr7.2:49919994-49920013 | MS.gene023023:intron | 10.0% |
!! | TATAGAAATATACATTTCTA+AGG | - | chr7.2:49920166-49920185 | None:intergenic | 15.0% |
!! | TTCATTAATTATCATACATT+AGG | + | chr7.2:49919917-49919936 | MS.gene023023:intron | 15.0% |
!!! | AATGATGATTTAAAACAAAT+TGG | + | chr7.2:49920700-49920719 | MS.gene023023:intron | 15.0% |
!!! | GAAGAAAAAAAAATCTATTT+TGG | - | chr7.2:49920302-49920321 | None:intergenic | 15.0% |
!!! | TTTATTTTGTTTACCTTTTA+TGG | + | chr7.2:49920748-49920767 | MS.gene023023:intron | 15.0% |
!! | ATAAAAAATCCATTTCTGTT+AGG | - | chr7.2:49919962-49919981 | None:intergenic | 20.0% |
!! | CTAATAATCACAAATTGTTT+GGG | + | chr7.2:49920798-49920817 | MS.gene023023:intron | 20.0% |
!! | TAAGAGAAATGATAGAAAAA+TGG | + | chr7.2:49921088-49921107 | MS.gene023023:CDS | 20.0% |
!! | TATCATACATTAGGAAAAAT+TGG | + | chr7.2:49919926-49919945 | MS.gene023023:intron | 20.0% |
!! | TATCATGTATTAACCATAAA+AGG | - | chr7.2:49920764-49920783 | None:intergenic | 20.0% |
!! | TCTAATAATCACAAATTGTT+TGG | + | chr7.2:49920797-49920816 | MS.gene023023:intron | 20.0% |
!! | TGATAAGTCATTTCATTATT+TGG | + | chr7.2:49920236-49920255 | MS.gene023023:intron | 20.0% |
!! | TTTCTATCATTTCTCTTATA+AGG | - | chr7.2:49921086-49921105 | None:intergenic | 20.0% |
!!! | ATACATGATATTTTAACAAG+TGG | + | chr7.2:49920774-49920793 | MS.gene023023:intron | 20.0% |
!!! | GATATATAAGATATTGATTC+TGG | + | chr7.2:49920022-49920041 | MS.gene023023:intron | 20.0% |
! | ATATATAATGTGTGTGTAGA+TGG | + | chr7.2:49920412-49920431 | MS.gene023023:intron | 25.0% |
! | ATTTCTCTTATAAGGTGATT+TGG | - | chr7.2:49921078-49921097 | None:intergenic | 25.0% |
! | CATAAAGACATATAGTTTGA+AGG | - | chr7.2:49921887-49921906 | None:intergenic | 25.0% |
! | GAAAAATGGTCTAAAAATCA+AGG | + | chr7.2:49921102-49921121 | MS.gene023023:CDS | 25.0% |
! | GAGAAAATGTTGAAAACATA+AGG | + | chr7.2:49919815-49919834 | MS.gene023023:intron | 25.0% |
! | TAAAATGTTCCTAACAGAAA+TGG | + | chr7.2:49919950-49919969 | MS.gene023023:intron | 25.0% |
! | TATATCTTCATCATCAACAA+TGG | - | chr7.2:49919528-49919547 | None:intergenic | 25.0% |
! | TTAAACCATCTTTGAATGAA+AGG | - | chr7.2:49920997-49921016 | None:intergenic | 25.0% |
! | TTGGTACTTTATTCTATGTT+TGG | + | chr7.2:49920079-49920098 | MS.gene023023:intron | 25.0% |
!! | AAACAAATTGGAGATTTTTC+TGG | + | chr7.2:49920712-49920731 | MS.gene023023:intron | 25.0% |
!! | AAGGCATCAATGTTAAAATT+GGG | - | chr7.2:49920597-49920616 | None:intergenic | 25.0% |
!! | ACAATACATGACATTTTTGT+TGG | + | chr7.2:49920945-49920964 | MS.gene023023:intron | 25.0% |
!! | GAGAAAAGAAAAAGTAGTTT+TGG | - | chr7.2:49920625-49920644 | None:intergenic | 25.0% |
!!! | AAAAGAAAAAGTAGTTTTGG+TGG | - | chr7.2:49920622-49920641 | None:intergenic | 25.0% |
!!! | AAAGAAAAAGTAGTTTTGGT+GGG | - | chr7.2:49920621-49920640 | None:intergenic | 25.0% |
!!! | TAAGATATTGATTCTGGTTT+TGG | + | chr7.2:49920028-49920047 | MS.gene023023:intron | 25.0% |
!!! | TTTTTGTTTATCTCTTTTGC+TGG | + | chr7.2:49920052-49920071 | MS.gene023023:intron | 25.0% |
AGGTATGGTAAAGATAGAAA+AGG | + | chr7.2:49920111-49920130 | MS.gene023023:intron | 30.0% | |
ATACTATCTCCTTCACAAAT+TGG | - | chr7.2:49921339-49921358 | None:intergenic | 30.0% | |
ATAGACCTTTCATTCAAAGA+TGG | + | chr7.2:49920989-49921008 | MS.gene023023:CDS | 30.0% | |
ATTAGTTACATTAGCGATGA+AGG | + | chr7.2:49921144-49921163 | MS.gene023023:CDS | 30.0% | |
ATTCAAAGATGGTTTAATGC+TGG | + | chr7.2:49921000-49921019 | MS.gene023023:CDS | 30.0% | |
ATTTCTGAACTTGCAAAAAG+TGG | + | chr7.2:49921957-49921976 | MS.gene023023:CDS | 30.0% | |
CAATGTTAAAATTGGGAGAA+AGG | - | chr7.2:49920590-49920609 | None:intergenic | 30.0% | |
CTATCTTTACCATACCTTTA+TGG | - | chr7.2:49920108-49920127 | None:intergenic | 30.0% | |
GAGCATTAAACAACAAAAAC+AGG | - | chr7.2:49920324-49920343 | None:intergenic | 30.0% | |
TTTATGATAGATCCAAGTTG+AGG | + | chr7.2:49921901-49921920 | MS.gene023023:CDS | 30.0% | |
! | CTTTGTGTAAAACTTTTGAC+TGG | + | chr7.2:49920518-49920537 | MS.gene023023:intron | 30.0% |
! | TATCTCTTTTGCTGGAATTT+TGG | + | chr7.2:49920060-49920079 | MS.gene023023:intron | 30.0% |
! | TTATGATAGATCCAAGTTGA+GGG | + | chr7.2:49921902-49921921 | MS.gene023023:CDS | 30.0% |
!! | CAAAAAAGTACTCGAAAACA+AGG | - | chr7.2:49921282-49921301 | None:intergenic | 30.0% |
!! | GAAGGCATCAATGTTAAAAT+TGG | - | chr7.2:49920598-49920617 | None:intergenic | 30.0% |
!!! | AAGAAAAAGTAGTTTTGGTG+GGG | - | chr7.2:49920620-49920639 | None:intergenic | 30.0% |
!!! | TTTGACTGGTTTTCTCAAAA+GGG | + | chr7.2:49920532-49920551 | MS.gene023023:intron | 30.0% |
!!! | TTTTGACTGGTTTTCTCAAA+AGG | + | chr7.2:49920531-49920550 | MS.gene023023:intron | 30.0% |
AAAGCAATAGCAGTGAAAGA+CGG | + | chr7.2:49921672-49921691 | MS.gene023023:CDS | 35.0% | |
AATAGTTCTTGGTCTGACTA+TGG | + | chr7.2:49920847-49920866 | MS.gene023023:intron | 35.0% | |
AATTCTTGAGAGACTGCATA+GGG | + | chr7.2:49922010-49922029 | MS.gene023023:CDS | 35.0% | |
ACTCGAGTTTGAATCTTGAT+CGG | + | chr7.2:49920824-49920843 | MS.gene023023:intron | 35.0% | |
AGGATCTCTCATAAATTCCT+TGG | - | chr7.2:49919696-49919715 | None:intergenic | 35.0% | |
AGTGGACATTTGAATTCATC+TGG | - | chr7.2:49919671-49919690 | None:intergenic | 35.0% | |
ATCTTGATCGGAATAGTTCT+TGG | + | chr7.2:49920836-49920855 | MS.gene023023:intron | 35.0% | |
ATGAGGATTGGAATTACCAT+TGG | - | chr7.2:49921447-49921466 | None:intergenic | 35.0% | |
ATTCAAATGTCCACTTTCCA+AGG | + | chr7.2:49919676-49919695 | MS.gene023023:CDS | 35.0% | |
CTCATAAATTCCTTGGAAAG+TGG | - | chr7.2:49919689-49919708 | None:intergenic | 35.0% | |
CTGGTAATCCAAAGTTTGAT+CGG | - | chr7.2:49920880-49920899 | None:intergenic | 35.0% | |
GATGGTTTAATGCTGGAAAT+AGG | + | chr7.2:49921007-49921026 | MS.gene023023:CDS | 35.0% | |
GCTTTCTTCAACATAACTTC+TGG | - | chr7.2:49919467-49919486 | None:intergenic | 35.0% | |
GTGGACATTTGAATTCATCT+GGG | - | chr7.2:49919670-49919689 | None:intergenic | 35.0% | |
TCACATCTTCTTGAAGTTCA+TGG | - | chr7.2:49921365-49921384 | None:intergenic | 35.0% | |
TCAGGTTAGTGTCACAAATT+TGG | + | chr7.2:49919733-49919752 | MS.gene023023:intron | 35.0% | |
TGACAACAACAAGAAACAAG+TGG | + | chr7.2:49921413-49921432 | MS.gene023023:CDS | 35.0% | |
TGCAAAAAGTGGAACTTCAA+GGG | + | chr7.2:49921968-49921987 | MS.gene023023:CDS | 35.0% | |
TGTAGATGGAAAGAGAAAGT+GGG | + | chr7.2:49920426-49920445 | MS.gene023023:intron | 35.0% | |
TTATCGACCTATTGGAAGAA+GGG | + | chr7.2:49921586-49921605 | MS.gene023023:CDS | 35.0% | |
TTGCAAAAAGTGGAACTTCA+AGG | + | chr7.2:49921967-49921986 | MS.gene023023:CDS | 35.0% | |
TTGCTTAAGCCAATTTGTGA+AGG | + | chr7.2:49921327-49921346 | MS.gene023023:CDS | 35.0% | |
! | ATCCAAGTTGAGGGAAATAA+AGG | + | chr7.2:49921911-49921930 | MS.gene023023:CDS | 35.0% |
! | CAAATTGGCTTAAGCAATTG+AGG | - | chr7.2:49921324-49921343 | None:intergenic | 35.0% |
! | TCTATGTTTGGTGACCATAA+AGG | + | chr7.2:49920091-49920110 | MS.gene023023:intron | 35.0% |
! | TTCCTTTATTTCCCTCAACT+TGG | - | chr7.2:49921916-49921935 | None:intergenic | 35.0% |
!! | TAGTGCTGATAACGTGAAAA+GGG | - | chr7.2:49921520-49921539 | None:intergenic | 35.0% |
AAAACCGCTTATCGACCTAT+TGG | + | chr7.2:49921578-49921597 | MS.gene023023:CDS | 40.0% | |
ACAAGTGGCTGAAATTCCAA+TGG | + | chr7.2:49921428-49921447 | MS.gene023023:CDS | 40.0% | |
ACTTAACCATCGCGTTTCTA+GGG | - | chr7.2:49920914-49920933 | None:intergenic | 40.0% | |
AGCAACATCCTTCATAGCTA+AGG | - | chr7.2:49921616-49921635 | None:intergenic | 40.0% | |
ATGTGGAACAATCGAAACAC+GGG | + | chr7.2:49921479-49921498 | MS.gene023023:CDS | 40.0% | |
CAACTCCTTCTTCAACTCTA+AGG | - | chr7.2:49919489-49919508 | None:intergenic | 40.0% | |
CGCATAATGCTTAGCAAACA+AGG | - | chr7.2:49921822-49921841 | None:intergenic | 40.0% | |
CTTATCGACCTATTGGAAGA+AGG | + | chr7.2:49921585-49921604 | MS.gene023023:CDS | 40.0% | |
CTTCTGATGAGTCGAAAGTA+GGG | - | chr7.2:49921766-49921785 | None:intergenic | 40.0% | |
GAAAGCCTTAGAGTTGAAGA+AGG | + | chr7.2:49919481-49919500 | MS.gene023023:CDS | 40.0% | |
GAATTCTTGAGAGACTGCAT+AGG | + | chr7.2:49922009-49922028 | MS.gene023023:CDS | 40.0% | |
GACTCAAACAAAGAGCTCAT+AGG | + | chr7.2:49921540-49921559 | MS.gene023023:CDS | 40.0% | |
GAGAGAACTTGATGAGTTTG+AGG | - | chr7.2:49921039-49921058 | None:intergenic | 40.0% | |
GATGTGGAACAATCGAAACA+CGG | + | chr7.2:49921478-49921497 | MS.gene023023:CDS | 40.0% | |
GCAACATCCTTCATAGCTAA+GGG | - | chr7.2:49921615-49921634 | None:intergenic | 40.0% | |
GGTAATTCCAATCCTCATGA+AGG | + | chr7.2:49921449-49921468 | MS.gene023023:CDS | 40.0% | |
GTGTAGATGGAAAGAGAAAG+TGG | + | chr7.2:49920425-49920444 | MS.gene023023:intron | 40.0% | |
GTTGAGGGAAATAAAGGAAG+AGG | + | chr7.2:49921917-49921936 | MS.gene023023:CDS | 40.0% | |
TAATCCAAAGTTTGATCGGC+AGG | - | chr7.2:49920876-49920895 | None:intergenic | 40.0% | |
TACTTAACCATCGCGTTTCT+AGG | - | chr7.2:49920915-49920934 | None:intergenic | 40.0% | |
TCTTCCAATAGGTCGATAAG+CGG | - | chr7.2:49921585-49921604 | None:intergenic | 40.0% | |
! | GTTTGGTGACCATAAAGGTA+TGG | + | chr7.2:49920096-49920115 | MS.gene023023:intron | 40.0% |
! | TAGGTCGATAAGCGGTTTTA+AGG | - | chr7.2:49921577-49921596 | None:intergenic | 40.0% |
!! | CTAGTGCTGATAACGTGAAA+AGG | - | chr7.2:49921521-49921540 | None:intergenic | 40.0% |
!!! | AAAAGTAGTTTTGGTGGGGA+AGG | - | chr7.2:49920616-49920635 | None:intergenic | 40.0% |
AATAGCAGTGAAAGACGGTG+CGG | + | chr7.2:49921677-49921696 | MS.gene023023:CDS | 45.0% | |
AGGGAATCCCTTAGCTATGA+AGG | + | chr7.2:49921605-49921624 | MS.gene023023:CDS | 45.0% | |
AGGGATTCCCTTCTTCCAAT+AGG | - | chr7.2:49921596-49921615 | None:intergenic | 45.0% | |
AGGGCTAAGAGAAAAGCTAG+TGG | + | chr7.2:49921987-49922006 | MS.gene023023:CDS | 45.0% | |
CACATCTCAATGCCTTCATG+AGG | - | chr7.2:49921464-49921483 | None:intergenic | 45.0% | |
CCTACTTTCGACTCATCAGA+AGG | + | chr7.2:49921764-49921783 | MS.gene023023:CDS | 45.0% | |
CCTTCTGATGAGTCGAAAGT+AGG | - | chr7.2:49921767-49921786 | None:intergenic | 45.0% | |
CTCAATGCCTTCATGAGGAT+TGG | - | chr7.2:49921459-49921478 | None:intergenic | 45.0% | |
GTTACCTGCCGATCAAACTT+TGG | + | chr7.2:49920869-49920888 | MS.gene023023:intron | 45.0% | |
TCAGAAGGCTGTCCTTGAAA+TGG | + | chr7.2:49921779-49921798 | MS.gene023023:CDS | 45.0% | |
TGACCAGAAGCAACAATGAC+AGG | - | chr7.2:49919716-49919735 | None:intergenic | 45.0% | |
! | ATCGCGTTTCTAGGGGAAAA+TGG | - | chr7.2:49920906-49920925 | None:intergenic | 45.0% |
! | ATTTTCCCCTAGAAACGCGA+TGG | + | chr7.2:49920905-49920924 | MS.gene023023:intron | 45.0% |
! | CTTAACCATCGCGTTTCTAG+GGG | - | chr7.2:49920913-49920932 | None:intergenic | 45.0% |
! | GATCCTGTCATTGTTGCTTC+TGG | + | chr7.2:49919710-49919729 | MS.gene023023:CDS | 45.0% |
! | TCGCGTTTCTAGGGGAAAAT+GGG | - | chr7.2:49920905-49920924 | None:intergenic | 45.0% |
! | TGTCATTGTTGCTTCTGGTC+AGG | + | chr7.2:49919715-49919734 | MS.gene023023:CDS | 45.0% |
!! | CTCATGAAGGCATTGAGATG+TGG | + | chr7.2:49921462-49921481 | MS.gene023023:CDS | 45.0% |
!!! | GATAAGCGGTTTTAAGGCGT+TGG | - | chr7.2:49921571-49921590 | None:intergenic | 45.0% |
!! | AAATTAAATTTCATTAAAAT+TGG | + | chr7.2:49919844-49919863 | MS.gene023023:intron | 5.0% |
AGACACTCCTGAGTGAGTAG+TGG | + | chr7.2:49920483-49920502 | MS.gene023023:intron | 50.0% | |
ATCACCACCACTACTCACTC+AGG | - | chr7.2:49920493-49920512 | None:intergenic | 50.0% | |
CGGTGCGGTTAGAGTGATTA+TGG | + | chr7.2:49921692-49921711 | MS.gene023023:CDS | 50.0% | |
GAAAAGGGTTGCTGCAGCAT+TGG | - | chr7.2:49921505-49921524 | None:intergenic | 50.0% | |
GAGCTCGTGTGAACGCAATA+AGG | + | chr7.2:49921845-49921864 | MS.gene023023:CDS | 50.0% | |
GATGAGTCGAAAGTAGGGCA+AGG | - | chr7.2:49921761-49921780 | None:intergenic | 50.0% | |
GTCCTTGAAATGGCAGAGCT+TGG | + | chr7.2:49921789-49921808 | MS.gene023023:CDS | 50.0% | |
GTGATTCGTCGACGTGAACT+CGG | - | chr7.2:49921731-49921750 | None:intergenic | 50.0% | |
! | CTCCAAGCTCTGCCATTTCA+AGG | - | chr7.2:49921794-49921813 | None:intergenic | 50.0% |
! | TTCTAGGGGAAAATGGGCTC+TGG | - | chr7.2:49920899-49920918 | None:intergenic | 50.0% |
CACTCCTGAGTGAGTAGTGG+TGG | + | chr7.2:49920486-49920505 | MS.gene023023:intron | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 49919434 | 49922058 | 49919434 | ID=MS.gene023023 |
chr7.2 | mRNA | 49919434 | 49922058 | 49919434 | ID=MS.gene023023.t1;Parent=MS.gene023023 |
chr7.2 | exon | 49919434 | 49919736 | 49919434 | ID=MS.gene023023.t1.exon1;Parent=MS.gene023023.t1 |
chr7.2 | CDS | 49919434 | 49919736 | 49919434 | ID=cds.MS.gene023023.t1;Parent=MS.gene023023.t1 |
chr7.2 | exon | 49920982 | 49922058 | 49920982 | ID=MS.gene023023.t1.exon2;Parent=MS.gene023023.t1 |
chr7.2 | CDS | 49920982 | 49922058 | 49920982 | ID=cds.MS.gene023023.t1;Parent=MS.gene023023.t1 |
Gene Sequence |
Protein sequence |