AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene023194

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene023194.t1 MTR_4g094695 99.294 992 7 0 1 992 1 992 0.0 2002
MS.gene023194.t1 MTR_2g035840 81.400 1000 163 6 5 991 8 997 0.0 1617
MS.gene023194.t1 MTR_5g010420 48.791 951 458 9 45 989 52 979 0.0 880
MS.gene023194.t1 MTR_5g010420 37.500 96 50 1 12 107 107 192 4.75e-11 67.4
MS.gene023194.t1 MTR_5g010420 27.632 152 102 3 109 255 34 182 4.95e-11 67.4
MS.gene023194.t1 MTR_8g079250 47.208 949 478 8 45 989 59 988 0.0 853
MS.gene023194.t1 MTR_8g079250 30.675 163 96 4 108 255 30 190 1.03e-13 76.3
MS.gene023194.t1 MTR_8g012390 47.071 973 478 13 19 981 6 951 0.0 798
MS.gene023194.t1 MTR_8g079250 43.329 817 440 8 45 857 59 856 0.0 655
MS.gene023194.t1 MTR_8g079250 30.675 163 96 4 108 255 30 190 1.05e-13 76.3
MS.gene023194.t1 MTR_8g012390 43.042 848 448 12 19 857 6 827 0.0 629
MS.gene023194.t1 MTR_8g079250 43.711 636 349 5 45 676 59 689 3.07e-175 527
MS.gene023194.t1 MTR_8g079250 30.675 163 96 4 108 255 30 190 9.70e-14 75.9
MS.gene023194.t1 MTR_3g105190 35.634 710 393 14 302 981 210 885 4.22e-121 392
MS.gene023194.t1 MTR_4g094232 37.926 675 360 13 340 990 285 924 7.69e-121 392
MS.gene023194.t1 MTR_3g105190 33.727 593 331 13 302 866 210 768 1.66e-84 289
MS.gene023194.t1 MTR_2g036380 28.418 746 433 19 203 940 12 664 6.76e-76 266
MS.gene023194.t1 MTR_2g036380 30.660 636 362 17 320 940 3 574 2.50e-75 263
MS.gene023194.t1 MTR_2g036380 33.811 488 278 13 460 940 32 481 3.12e-72 252
MS.gene023194.t1 MTR_2g036380 33.811 488 278 13 460 940 63 512 7.75e-72 252
MS.gene023194.t1 MTR_4g127580 27.577 747 418 23 203 930 17 659 4.40e-69 250
MS.gene023194.t1 MTR_4g094985 25.743 707 406 21 296 956 125 758 8.62e-39 156
MS.gene023194.t1 MTR_8g045070 25.865 549 338 15 458 939 211 757 1.71e-26 117
MS.gene023194.t1 MTR_4g127710 22.801 614 362 20 429 973 135 705 5.75e-23 106
MS.gene023194.t1 MTR_7g117500 23.007 552 342 15 437 934 140 662 7.13e-23 105
MS.gene023194.t1 MTR_4g127710 22.801 614 362 20 429 973 135 705 8.00e-23 105
MS.gene023194.t1 MTR_3g108800 21.793 569 363 12 429 948 132 667 5.15e-22 103
MS.gene023194.t1 MTR_3g108800 21.793 569 363 12 429 948 131 666 5.19e-22 103
MS.gene023194.t1 MTR_2g036650 22.680 582 343 19 429 948 137 673 5.32e-22 103
MS.gene023194.t1 MTR_4g008650 24.343 571 338 18 458 937 255 822 5.94e-22 102
MS.gene023194.t1 MTR_1g009760 21.934 579 350 15 429 948 135 670 2.44e-21 100
MS.gene023194.t1 MTR_8g063880 22.262 557 334 16 439 934 138 656 3.29e-21 100
MS.gene023194.t1 MTR_6g016470 22.813 583 334 19 465 937 245 821 4.94e-21 100
MS.gene023194.t1 MTR_7g117500 23.290 541 343 17 437 934 140 651 6.27e-21 99.8
MS.gene023194.t1 MTR_1g009760 21.762 579 351 15 429 948 132 667 7.63e-21 99.4
MS.gene023194.t1 MTR_7g100110 31.282 195 100 4 788 950 636 828 1.86e-20 98.2
MS.gene023194.t1 MTR_6g011310 22.442 557 333 15 439 934 140 658 7.85e-20 95.9
MS.gene023194.t1 MTR_4g107500 22.442 606 358 18 439 973 142 706 9.24e-20 95.9
MS.gene023194.t1 MTR_7g095710 23.191 608 355 17 439 937 250 854 2.56e-19 94.4
MS.gene023194.t1 MTR_6g011310 22.383 554 332 14 439 934 140 653 3.31e-19 94.0
MS.gene023194.t1 MTR_8g006790 22.302 556 334 16 439 934 146 663 6.15e-19 93.2
MS.gene023194.t1 MTR_8g013780 30.198 202 107 5 772 939 174 375 1.70e-18 90.9
MS.gene023194.t1 MTR_8g027160 29.282 181 94 3 788 934 618 798 2.21e-18 91.3
MS.gene023194.t1 MTR_8g027160 29.282 181 94 3 788 934 618 798 3.28e-18 90.9
MS.gene023194.t1 MTR_2g449840 21.731 566 342 17 429 934 133 657 3.68e-18 90.5
MS.gene023194.t1 MTR_2g104860 20.885 565 348 13 429 934 130 654 7.05e-18 89.7
MS.gene023194.t1 MTR_4g116950 21.326 558 354 19 429 934 133 657 8.21e-18 89.4
MS.gene023194.t1 MTR_5g015590 32.402 179 92 3 790 939 649 827 1.33e-17 88.6
MS.gene023194.t1 MTR_5g015590 32.402 179 92 3 790 939 649 827 1.33e-17 89.0
MS.gene023194.t1 MTR_5g015590 32.402 179 92 3 790 939 649 827 1.36e-17 89.0
MS.gene023194.t1 MTR_2g038310 28.962 183 97 2 788 937 695 877 6.56e-17 86.7
MS.gene023194.t1 MTR_2g038310 28.962 183 97 2 788 937 695 877 6.56e-17 86.7
MS.gene023194.t1 MTR_0005s0140 30.508 177 95 3 789 937 568 744 7.16e-17 86.3
MS.gene023194.t1 MTR_8g090125 32.022 178 92 5 789 937 603 780 8.53e-17 86.3
MS.gene023194.t1 MTR_4g043690 30.508 177 95 3 789 937 653 829 9.71e-17 86.3
MS.gene023194.t1 MTR_4g096990 30.168 179 96 3 790 939 647 825 3.21e-16 84.3
MS.gene023194.t1 MTR_3g103070 28.283 198 113 4 771 939 456 653 6.73e-16 83.2
MS.gene023194.t1 MTR_3g103070 28.283 198 113 4 771 939 632 829 7.61e-16 83.2
MS.gene023194.t1 MTR_8g446010 32.044 181 92 5 789 939 601 780 1.62e-15 82.0
MS.gene023194.t1 MTR_4g008650 31.319 182 95 6 786 937 641 822 3.54e-15 80.9
MS.gene023194.t1 MTR_3g103270 27.119 177 98 1 789 934 614 790 1.44e-14 79.0
MS.gene023194.t1 MTR_4g008170 27.322 183 100 3 788 937 715 897 1.91e-14 78.6
MS.gene023194.t1 MTR_4g008170 27.322 183 100 3 788 937 708 890 2.51e-14 78.2
MS.gene023194.t1 MTR_1g009720 26.136 176 100 2 789 934 481 656 9.27e-13 73.2
MS.gene023194.t1 MTR_5g015590 34.328 134 59 3 790 894 649 782 2.76e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene023194.t1 AT5G44790 72.989 1007 245 6 1 989 1 998 0.0 1468
MS.gene023194.t1 AT1G63440 47.614 964 473 9 35 989 47 987 0.0 869
MS.gene023194.t1 AT1G63440 29.825 171 111 3 19 189 109 270 6.23e-12 70.5
MS.gene023194.t1 AT5G21930 36.919 688 378 15 323 979 213 875 7.63e-121 390
MS.gene023194.t1 AT5G21930 36.919 688 378 15 323 979 213 875 7.63e-121 390
MS.gene023194.t1 AT4G33520 36.351 696 380 13 300 979 270 918 1.67e-113 373
MS.gene023194.t1 AT4G33520 36.351 696 380 13 300 979 270 918 2.18e-113 372
MS.gene023194.t1 AT5G21930 35.610 688 364 16 323 979 213 852 4.47e-109 358
MS.gene023194.t1 AT5G21930 36.076 632 344 16 323 923 213 815 9.97e-99 330
MS.gene023194.t1 AT4G30110 28.070 741 422 20 203 930 13 655 8.64e-73 260
MS.gene023194.t1 AT4G30110 28.070 741 422 20 203 930 13 655 8.64e-73 260
MS.gene023194.t1 AT2G19110 26.256 796 458 22 203 980 23 707 3.46e-62 231
MS.gene023194.t1 AT2G19110 26.256 796 458 22 203 980 23 707 3.46e-62 231
MS.gene023194.t1 AT2G19110 26.256 796 458 22 203 980 23 707 3.46e-62 231
MS.gene023194.t1 AT4G30120 30.707 368 215 6 393 759 4 332 5.03e-44 164
MS.gene023194.t1 AT4G30120 27.240 558 320 15 203 759 19 491 1.95e-43 167
MS.gene023194.t1 AT4G37270 26.418 617 360 15 356 930 181 745 2.27e-34 142
MS.gene023194.t1 AT3G57330 25.214 583 347 17 439 937 184 761 3.00e-27 120
MS.gene023194.t1 AT2G41560 25.293 597 344 17 433 937 131 717 4.09e-27 119
MS.gene023194.t1 AT2G41560 25.293 597 344 17 433 937 131 717 4.09e-27 119
MS.gene023194.t1 AT2G41560 25.293 597 344 17 433 937 131 717 4.09e-27 119
MS.gene023194.t1 AT3G57330 25.214 583 347 17 439 937 239 816 5.10e-27 119
MS.gene023194.t1 AT2G41560 25.293 597 344 17 433 937 233 819 6.58e-27 119
MS.gene023194.t1 AT2G24520 24.691 567 340 15 437 948 113 647 5.33e-23 106
MS.gene023194.t1 AT2G24520 24.691 567 340 15 437 948 113 647 5.33e-23 106
MS.gene023194.t1 AT2G24520 24.691 567 340 15 437 948 176 710 6.00e-23 106
MS.gene023194.t1 AT1G80660 22.378 572 335 16 427 934 4 530 1.40e-21 101
MS.gene023194.t1 AT1G80660 22.281 570 334 16 429 934 135 659 3.59e-21 100
MS.gene023194.t1 AT1G80660 22.281 570 334 16 429 934 135 659 3.62e-21 100
MS.gene023194.t1 AT1G80660 22.281 570 334 16 429 934 135 659 3.72e-21 100
MS.gene023194.t1 AT3G60330 23.285 554 336 14 437 934 134 654 6.29e-21 99.8
MS.gene023194.t1 AT3G60330 23.285 554 336 14 437 934 134 654 6.29e-21 99.8
MS.gene023194.t1 AT3G60330 23.105 554 337 14 437 934 134 654 1.41e-20 98.6
MS.gene023194.t1 AT3G60330 23.105 554 337 14 437 934 134 654 1.41e-20 98.6
MS.gene023194.t1 AT4G30190 22.261 566 339 16 429 934 130 654 2.90e-20 97.4
MS.gene023194.t1 AT1G17260 22.000 550 343 15 439 934 144 661 3.08e-20 97.4
MS.gene023194.t1 AT5G57350 22.632 570 332 16 429 934 131 655 3.88e-20 97.1
MS.gene023194.t1 AT5G57350 22.632 570 332 16 429 934 131 655 3.88e-20 97.1
MS.gene023194.t1 AT5G57350 22.632 570 332 16 429 934 131 655 3.88e-20 97.1
MS.gene023194.t1 AT2G07560 22.301 565 339 17 429 934 133 656 6.11e-20 96.3
MS.gene023194.t1 AT1G07670 30.693 202 102 5 783 950 615 812 1.12e-19 95.9
MS.gene023194.t1 AT1G07670 30.693 202 102 5 783 950 615 812 1.12e-19 95.9
MS.gene023194.t1 AT1G07810 29.500 200 107 4 783 950 615 812 1.78e-19 95.1
MS.gene023194.t1 AT5G62670 21.818 605 363 18 439 973 140 704 3.86e-19 94.0
MS.gene023194.t1 AT3G47950 21.951 615 350 17 439 973 144 708 4.67e-19 93.6
MS.gene023194.t1 AT3G47950 21.951 615 350 17 439 973 144 708 4.67e-19 93.6
MS.gene023194.t1 AT2G18960 21.770 565 343 16 429 934 66 590 4.35e-18 90.5
MS.gene023194.t1 AT2G18960 21.770 565 343 16 429 934 66 590 4.35e-18 90.5
MS.gene023194.t1 AT2G18960 21.770 565 343 16 429 934 130 654 4.42e-18 90.5
MS.gene023194.t1 AT4G00900 29.032 186 98 4 783 934 609 794 5.46e-18 90.1
MS.gene023194.t1 AT4G00900 29.032 186 98 4 783 934 609 794 5.46e-18 90.1
MS.gene023194.t1 AT3G42640 22.144 569 336 16 429 934 133 657 1.40e-17 89.0
MS.gene023194.t1 AT4G37640 30.168 179 96 3 790 939 649 827 7.19e-17 86.7
MS.gene023194.t1 AT4G29900 27.037 270 141 7 701 937 613 859 7.27e-17 86.7
MS.gene023194.t1 AT4G29900 27.037 270 141 7 701 937 613 859 7.27e-17 86.7
MS.gene023194.t1 AT3G63380 29.670 182 95 2 789 937 640 821 2.70e-16 84.7
MS.gene023194.t1 AT2G22950 30.168 179 96 3 790 939 650 828 4.73e-16 84.0
MS.gene023194.t1 AT3G22910 30.435 184 95 4 789 939 636 819 5.03e-16 84.0
MS.gene023194.t1 AT5G57110 28.415 183 98 2 788 937 673 855 8.92e-16 83.2
MS.gene023194.t1 AT5G57110 28.415 183 98 2 788 937 673 855 8.92e-16 83.2
MS.gene023194.t1 AT5G57110 28.415 183 98 2 788 937 673 855 8.92e-16 83.2
MS.gene023194.t1 AT1G10130 27.684 177 97 1 789 934 582 758 1.25e-15 82.4
MS.gene023194.t1 AT3G21180 23.154 596 327 21 458 937 292 872 1.31e-15 82.4
MS.gene023194.t1 AT2G24520 23.724 392 233 8 610 948 26 404 1.33e-15 82.0
MS.gene023194.t1 AT5G57350 23.969 388 212 10 610 934 26 393 2.17e-14 78.2

Find 237 sgRNAs with CRISPR-Local

Find 458 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTCCTGCAACAGCTTTAT+TGG 0.127790 4.3:-18538390 MS.gene023194:CDS
CTTCTGTATGGCGCTCTTAC+TGG 0.137276 4.3:-18538536 MS.gene023194:CDS
TGTATTGTTGGGAAAGTATT+TGG 0.165698 4.3:-18538465 MS.gene023194:CDS
TTAATTCATTGGCATCATTT+TGG 0.206497 4.3:+18535924 None:intergenic
GGAGTATTGATTGGAGTCTT+AGG 0.229752 4.3:-18535531 MS.gene023194:CDS
TCAGATTCCCCTCTTCTTCA+TGG 0.235078 4.3:-18538786 MS.gene023194:intron
ATGGCGCTCTTACTGGATTT+TGG 0.241881 4.3:-18538529 MS.gene023194:CDS
GGTTGTAGGTGTTTGTTCTT+TGG 0.247236 4.3:-18539522 MS.gene023194:CDS
GAATGGGAGCTTTGGACATC+TGG 0.249424 4.3:+18537889 None:intergenic
GAGTTCTACTAGCTTCTTAA+TGG 0.251062 4.3:+18538412 None:intergenic
TATAGAGGGCCTCCAGAAAA+TGG 0.253304 4.3:-18535472 MS.gene023194:CDS
CTTGAGTCAGATAATTAATT+TGG 0.256617 4.3:-18537922 MS.gene023194:CDS
TTTGGTGGATGCAAGGGTTT+TGG 0.266860 4.3:-18539504 MS.gene023194:CDS
AACAATGGTGTGTTAATTAA+AGG 0.285608 4.3:-18536453 MS.gene023194:CDS
TCATGGTGGCAACAGGTGTT+GGG 0.293408 4.3:-18536479 MS.gene023194:CDS
TTGGTGAGTGTCATTCAATT+TGG 0.297350 4.3:-18538674 MS.gene023194:CDS
CACCATCTGAGCTCTTTCTA+AGG 0.299600 4.3:+18536422 None:intergenic
CCGCTGATGGTATTGTTACC+TGG 0.303580 4.3:-18538088 MS.gene023194:CDS
TGTGTTGATGAGAGATAATT+TGG 0.310034 4.3:-18534753 MS.gene023194:CDS
ATGCACTGCACACCCCTTCC+TGG 0.312304 4.3:+18535860 None:intergenic
GCTTATAACATTTGTATTGT+TGG 0.323122 4.3:-18538477 MS.gene023194:CDS
CGCTGATGGTATTGTTACCT+GGG 0.329723 4.3:-18538087 MS.gene023194:CDS
GGCCTTTCCTCATGGATGAT+TGG 0.331728 4.3:-18538709 MS.gene023194:CDS
TCTTCTTTGCTTATCACGTT+TGG 0.333112 4.3:+18539623 None:intergenic
TTATCTCCTGTAACCATTAC+AGG 0.336285 4.3:+18535441 None:intergenic
CATGGATGTCCTTGTTGCTT+TGG 0.338225 4.3:-18538594 MS.gene023194:CDS
AGGTATACTGCTGGGGCTCT+TGG 0.348034 4.3:-18536624 MS.gene023194:CDS
ACTCATCAAAGAAGTGAAAA+TGG 0.349385 4.3:+18535966 None:intergenic
CTTATAACATTTGTATTGTT+GGG 0.352878 4.3:-18538476 MS.gene023194:CDS
GTACTATCTCCAACCGGTTT+AGG 0.354063 4.3:+18539785 None:intergenic
TGGTGAGTGTCATTCAATTT+GGG 0.354358 4.3:-18538673 MS.gene023194:CDS
AGGTTGGCATTCAAGATGTT+AGG 0.358093 4.3:-18534946 MS.gene023194:CDS
TCTGTTGCCAAGGTGTTTGC+AGG 0.360309 4.3:-18536345 MS.gene023194:CDS
TTAGAAGCCATTCTCGCATA+AGG 0.362030 4.3:+18539320 None:intergenic
CAGAGAGTTCGTCTATGTTT+CGG 0.362552 4.3:-18539289 MS.gene023194:CDS
GTGGCTTTAGCTACTTCATT+AGG 0.364293 4.3:-18539662 MS.gene023194:CDS
CAGATTCCCCTCTTCTTCAT+GGG 0.370257 4.3:-18538785 MS.gene023194:CDS
GAGTATTGATTGGAGTCTTA+GGG 0.372614 4.3:-18535530 MS.gene023194:CDS
TCAGACTTCTCTGCTATTCC+AGG 0.372749 4.3:-18535878 MS.gene023194:CDS
ATCACGCCTGTAATGGTTAC+AGG 0.374551 4.3:-18535447 MS.gene023194:CDS
GATGCCAATGAATTAAAATC+AGG 0.379078 4.3:-18535917 MS.gene023194:CDS
CGACGGAATTAACCGGATTC+AGG 0.380567 4.3:-18540124 MS.gene023194:CDS
AAGCTTCCACCATGGGTTGC+TGG 0.384722 4.3:-18534596 MS.gene023194:CDS
TCATATACTCGTTATTACTT+TGG 0.386797 4.3:-18538739 MS.gene023194:CDS
AGCTGAGATCTTACATGAAC+CGG 0.387930 4.3:-18539819 MS.gene023194:CDS
AATGACAGAGCTACAATTGT+AGG 0.388212 4.3:+18536769 None:intergenic
GCTTTCAGAGCTCTTAGAAA+TGG 0.390325 4.3:-18538626 MS.gene023194:CDS
CCGTGGAGAATTTCTTAAAC+TGG 0.391473 4.3:-18536316 MS.gene023194:CDS
TCTGTTTGTGCTCTTCTGTA+TGG 0.392307 4.3:-18538548 MS.gene023194:CDS
TATAGACGGACAGCGTGTTT+TGG 0.392640 4.3:-18535837 MS.gene023194:intron
TGAAAGGGGTGAGGCAGTTT+CGG 0.402464 4.3:-18539463 MS.gene023194:CDS
ATGGATGTCCTTGTTGCTTT+GGG 0.403864 4.3:-18538593 MS.gene023194:CDS
GGTTTCAACCGGACCTAAAC+CGG 0.406822 4.3:-18539798 MS.gene023194:CDS
AAGTTATGTAAATGAGAGTA+TGG 0.407246 4.3:-18538060 MS.gene023194:CDS
CAACAGATATAGAAAACATA+AGG 0.407868 4.3:+18536550 None:intergenic
ACAACCAATAAAGCTGTTGC+AGG 0.410607 4.3:+18538386 None:intergenic
GTCATGGTGGCAACAGGTGT+TGG 0.416154 4.3:-18536480 MS.gene023194:CDS
AGTAATAACGAGTATATGAA+TGG 0.419114 4.3:+18538743 None:intergenic
TAATGGTTACAGGAGATAAC+TGG 0.422229 4.3:-18535437 MS.gene023194:CDS
GTTCTGATCAGGTTGGTAAC+AGG 0.435074 4.3:-18535656 MS.gene023194:intron
TAGAAGCCATTCTCGCATAA+GGG 0.435660 4.3:+18539321 None:intergenic
TTGCCGTACCAGTTGCTGCC+GGG 0.437758 4.3:-18534643 MS.gene023194:CDS
TCTATTTCTCTTTCTTCCAC+AGG 0.437986 4.3:+18538167 None:intergenic
AATAAAACCCCGGCAGCAAC+TGG 0.442685 4.3:+18534635 None:intergenic
ATCTCCAACCGGTTTAGGTC+CGG 0.444101 4.3:+18539790 None:intergenic
AGAAGCTTCTGTTGTTATAG+AGG 0.445207 4.3:-18535487 MS.gene023194:CDS
ATGCCCATGTGCACTTGGTT+TGG 0.446212 4.3:-18536517 MS.gene023194:CDS
GCATTGATCTCCTTCGAAAC+AGG 0.451969 4.3:+18538020 None:intergenic
TGCCAAGGTGTTTGCAGGAA+TGG 0.454986 4.3:-18536340 MS.gene023194:CDS
TCAAGTATTGTAGTAAGTCT+TGG 0.455124 4.3:+18534506 None:intergenic
GAGATCAATGCATCTGTCAT+TGG 0.457423 4.3:-18538008 MS.gene023194:CDS
AGTGTCATTCAATTTGGGAT+TGG 0.457590 4.3:-18538668 MS.gene023194:CDS
GCGAGAATGGCTTCTAAAGA+TGG 0.457955 4.3:-18539314 MS.gene023194:CDS
TTACATGAACCGGTTTCAAC+CGG 0.457960 4.3:-18539809 MS.gene023194:CDS
GTCATTTAAAATTCCTTCAA+CGG 0.461784 4.3:+18539709 None:intergenic
CTTGAAGAAAGTGCCAAGAC+TGG 0.462679 4.3:-18535573 MS.gene023194:CDS
TGGTACGGCAATAATATTGT+AGG 0.462863 4.3:+18534655 None:intergenic
GTTATTGCAATTGAAGATGC+AGG 0.464292 4.3:-18539596 MS.gene023194:CDS
TGTAGGTGTTTGTTCTTTGG+TGG 0.464503 4.3:-18539519 MS.gene023194:CDS
TCAACGACGACGGAATTAAC+CGG 0.465540 4.3:-18540131 MS.gene023194:CDS
TTTGTTCTTTGGTGGATGCA+AGG 0.466118 4.3:-18539511 MS.gene023194:CDS
GGTTTAGGTCCGGTTGAAAC+CGG 0.466163 4.3:+18539800 None:intergenic
GACTGTATCGGATCCTACTT+TGG 0.467006 4.3:+18537944 None:intergenic
AAGAATGCAATTGAAGATGC+AGG 0.469462 4.3:-18539848 MS.gene023194:CDS
GCAGATGTTGGTATGGCAAT+TGG 0.470750 4.3:-18534812 MS.gene023194:CDS
ATGGGTTGCTGGTGCATGCA+TGG 0.471253 4.3:-18534585 MS.gene023194:CDS
GCCGGAGTCATCGCCGGCGC+CGG 0.474208 4.3:+18540200 None:intergenic
TAGAAGCCCTTATGCGAGAA+TGG 0.476362 4.3:-18539327 MS.gene023194:CDS
CGGTGATTCTGACCTGAATC+CGG 0.483249 4.3:+18540112 None:intergenic
AGTTCTTAGTTCTAGATCGT+TGG 0.488758 4.3:-18539396 MS.gene023194:CDS
GAGATGTGGGCCTTTCCTCA+TGG 0.488956 4.3:-18538717 MS.gene023194:CDS
CGCTACAAGGATCCCAGTCT+TGG 0.489491 4.3:+18535560 None:intergenic
TCGTTATTACTTTGGAGATG+TGG 0.489608 4.3:-18538731 MS.gene023194:CDS
GTATGCTTAGTGGTATGAAA+GGG 0.490896 4.3:-18539478 MS.gene023194:CDS
ATTGCATGCCCATGTGCACT+TGG 0.493098 4.3:-18536522 MS.gene023194:CDS
AATGGGAATCACGCCTGTAA+TGG 0.494340 4.3:-18535454 MS.gene023194:CDS
CGGATTCAGGTCAGAATCAC+CGG 0.498291 4.3:-18540111 MS.gene023194:CDS
AGTATGCTTAGTGGTATGAA+AGG 0.501872 4.3:-18539479 MS.gene023194:CDS
ATTGCCGTACCAGTTGCTGC+CGG 0.503085 4.3:-18534644 MS.gene023194:CDS
CGTTATTACTTTGGAGATGT+GGG 0.506990 4.3:-18538730 MS.gene023194:CDS
TGCCGTACCAGTTGCTGCCG+GGG 0.507352 4.3:-18534642 MS.gene023194:CDS
GCATTAGCTGCTGCAGATGT+TGG 0.507757 4.3:-18534824 MS.gene023194:CDS
AATGGGAGCTTTGGACATCT+GGG 0.508519 4.3:+18537890 None:intergenic
GTCGCCAAACCAAGTGCACA+TGG 0.508959 4.3:+18536513 None:intergenic
ATAGAGGGCCTCCAGAAAAT+GGG 0.509737 4.3:-18535471 MS.gene023194:CDS
GGCAATAATATTGTAGGCCA+TGG 0.510022 4.3:+18534661 None:intergenic
TACGTTATATTTGATAAGAC+AGG 0.512329 4.3:-18536396 MS.gene023194:CDS
GGAGTCATCGCCGGCGCCGG+TGG 0.512775 4.3:+18540203 None:intergenic
GTTGGTATGGCAATTGGAGC+TGG 0.513083 4.3:-18534806 MS.gene023194:CDS
GGTTGGCATTCAAGATGTTA+GGG 0.513253 4.3:-18534945 MS.gene023194:CDS
CATTCAAGATGTTAGGGCAG+AGG 0.513441 4.3:-18534939 MS.gene023194:CDS
GAAATATATACAAACCTCCT+TGG 0.514370 4.3:+18535395 None:intergenic
CATAAGTATTTCTACTGAAG+TGG 0.514915 4.3:-18535613 MS.gene023194:CDS
ACTGCTGTCATGGTGGCAAC+AGG 0.515401 4.3:-18536486 MS.gene023194:CDS
TTGTTCTTTGGTGGATGCAA+GGG 0.516975 4.3:-18539510 MS.gene023194:CDS
GATGAGTCCTCTCTTACCAA+TGG 0.518678 4.3:-18535950 MS.gene023194:CDS
CACATTAAAGCTACCAAAGT+AGG 0.519785 4.3:-18537957 MS.gene023194:CDS
AGGGCAGAGGTTATGCCTGC+AGG 0.519939 4.3:-18534926 MS.gene023194:CDS
AGAGGTTATGCCTGCAGGAA+AGG 0.525897 4.3:-18534921 MS.gene023194:CDS
ATACTCCATTGCACGCTACA+AGG 0.526385 4.3:+18535547 None:intergenic
GGCGACACCAACTGCTGTCA+TGG 0.527208 4.3:-18536496 MS.gene023194:CDS
GGACATGAGAGCGGCTTCAA+CGG 0.527618 4.3:+18540062 None:intergenic
ACCACATCAGCCTTTCCTGC+AGG 0.530022 4.3:+18534911 None:intergenic
CATGGTGGCAACAGGTGTTG+GGG 0.530178 4.3:-18536478 MS.gene023194:CDS
TAAGACAGGAACTCTAACTC+AGG 0.530527 4.3:-18536382 MS.gene023194:CDS
GTAATAACGAGTATATGAAT+GGG 0.531622 4.3:+18538744 None:intergenic
TGATTGGTTGAAGTGGGCAT+TGG 0.532100 4.3:-18538693 MS.gene023194:CDS
ATCCTTAGAAAGAGCTCAGA+TGG 0.532974 4.3:-18536424 MS.gene023194:CDS
GCAAGCGGCGCATGTCATGC+CGG 0.533829 4.3:+18540092 None:intergenic
CTTTGGTAGCTTTAATGTGA+AGG 0.535532 4.3:+18537961 None:intergenic
GGCATCAGATGTCTTCCCCT+TGG 0.535998 4.3:+18538433 None:intergenic
GATAATTAATTTGGTCGAGA+CGG 0.537531 4.3:-18537913 MS.gene023194:CDS
AACAGATATAGAAAACATAA+GGG 0.538427 4.3:+18536551 None:intergenic
GCCGCTCTCATGTCCGTCGA+CGG 0.539449 4.3:-18540054 MS.gene023194:CDS
AGATTCCCCTCTTCTTCATG+GGG 0.539845 4.3:-18538784 MS.gene023194:CDS
ACCGGCGCCGGCGATGACTC+CGG 0.540319 4.3:-18540201 MS.gene023194:CDS
GAGTATATGAATGGGATATG+AGG 0.542597 4.3:+18538752 None:intergenic
GAAGCTTCTGTTGTTATAGA+GGG 0.546172 4.3:-18535486 MS.gene023194:CDS
GGGAATCAAGCTTCCACCAT+GGG 0.547653 4.3:-18534603 MS.gene023194:CDS
AGGAAGCTGCTGGTGGAAAG+TGG 0.550070 4.3:-18535636 MS.gene023194:CDS
AACTGCTCGAGCTGTTGCCA+AGG 0.550725 4.3:-18535412 MS.gene023194:CDS
ATTTACATAACTTGAGCCCC+AGG 0.551493 4.3:+18538070 None:intergenic
ATTGAATTATGTATTTGCCA+TGG 0.551910 4.3:-18534678 MS.gene023194:CDS
AAGGACACCATGCAAATTGA+TGG 0.553347 4.3:+18537980 None:intergenic
GTGGAAGTTAGTTGAATACT+CGG 0.553506 4.3:+18540222 None:intergenic
AGCCACTGTCTCTGTTGCCA+AGG 0.554586 4.3:-18536355 MS.gene023194:CDS
TTGGGATCCATTGGTAAGAG+AGG 0.555619 4.3:+18535943 None:intergenic
CAACTAACTTCCACCGGCGC+CGG 0.556089 4.3:-18540213 MS.gene023194:CDS
TTCTCTGCTATTCCAGGAAG+GGG 0.557195 4.3:-18535872 MS.gene023194:CDS
GGCTAGCAGTGAACACCCGC+TGG 0.559219 4.3:-18536014 MS.gene023194:CDS
GCGTGCAATGGAGTATTGAT+TGG 0.559641 4.3:-18535540 MS.gene023194:CDS
ACCACCGTACTATCTCCAAC+CGG 0.560837 4.3:+18539779 None:intergenic
GCGTGTGTGAATTCCGTTGA+AGG 0.561783 4.3:-18539722 MS.gene023194:CDS
ACATCTGCAGCAGCTAATGC+AGG 0.562486 4.3:+18534827 None:intergenic
TAAACTGGTGGCTTCTGCTG+AGG 0.563783 4.3:-18536301 MS.gene023194:intron
AGATGGTAGCATAGTTGCAA+TGG 0.564301 4.3:-18534873 MS.gene023194:CDS
GGGATCCTTGTAGCGTGCAA+TGG 0.564317 4.3:-18535552 MS.gene023194:CDS
AATGGTGTGTTAATTAAAGG+AGG 0.566500 4.3:-18536450 MS.gene023194:CDS
GCGAACATCTTCGAGATCGC+CGG 0.566672 4.3:+18540182 None:intergenic
GGTTGGTAACAGGAAGCTGC+TGG 0.567598 4.3:-18535646 MS.gene023194:CDS
CTTCTCTGCTATTCCAGGAA+GGG 0.570582 4.3:-18535873 MS.gene023194:CDS
GTATTTGGAATGTCTTGCCA+AGG 0.571096 4.3:-18538450 MS.gene023194:CDS
TCATGGATGATTGGTTGAAG+TGG 0.573589 4.3:-18538700 MS.gene023194:CDS
TTGAAGAAAGTGCCAAGACT+GGG 0.574392 4.3:-18535572 MS.gene023194:CDS
GTCACTAGGTTGAATAAGCA+AGG 0.575805 4.3:+18538142 None:intergenic
CATTATTGACACTATTGTGT+TGG 0.576900 4.3:-18536750 MS.gene023194:intron
TTGGAGCATACCCAGATGAA+TGG 0.578362 4.3:-18536605 MS.gene023194:CDS
ACTTCTCTGCTATTCCAGGA+AGG 0.579821 4.3:-18535874 MS.gene023194:CDS
CAGGTAACAATACCATCAGC+GGG 0.580491 4.3:+18538089 None:intergenic
GGTACAAAGATTCCCGCTGA+TGG 0.580974 4.3:-18538101 MS.gene023194:CDS
GATCTAGAACTAAGAACTTG+AGG 0.581982 4.3:+18539401 None:intergenic
ATGCCAATGAATTAAAATCA+GGG 0.582049 4.3:-18535916 MS.gene023194:CDS
TAGAAATGGTTCAACAAACA+TGG 0.582828 4.3:-18538612 MS.gene023194:CDS
AGCTGCTGCAGATGTTGGTA+TGG 0.585708 4.3:-18534819 MS.gene023194:CDS
TGCTCGAGCTGTTGCCAAGG+AGG 0.585770 4.3:-18535409 MS.gene023194:intron
TCAGCGGGAATCTTTGTACC+AGG 0.585900 4.3:+18538104 None:intergenic
GTCCATTCCTGCAAACACCT+TGG 0.586968 4.3:+18536338 None:intergenic
GGAGGTACCATCAATTTGCA+TGG 0.587008 4.3:-18537987 MS.gene023194:CDS
GAGATCGCCGGAGTCATCGC+CGG 0.588833 4.3:+18540194 None:intergenic
TGGAGAATTTCTTAAACTGG+TGG 0.589048 4.3:-18536313 MS.gene023194:CDS
AGTATTCAACTAACTTCCAC+CGG 0.589297 4.3:-18540219 MS.gene023194:CDS
AACCCCGGCAGCAACTGGTA+CGG 0.593335 4.3:+18534640 None:intergenic
TTATTGGTTGTTAAAGACAA+AGG 0.593463 4.3:-18538374 MS.gene023194:intron
TATTTGGAATGTCTTGCCAA+GGG 0.598379 4.3:-18538449 MS.gene023194:CDS
GCCTGCAGGAAAGGCTGATG+TGG 0.598442 4.3:-18534912 MS.gene023194:CDS
TTCAACGGAGTTAGAGCAAG+CGG 0.598928 4.3:+18540077 None:intergenic
AACCAATCATCCATGAGGAA+AGG 0.599373 4.3:+18538707 None:intergenic
ATGCATGCACCAGCAACCCA+TGG 0.601867 4.3:+18534587 None:intergenic
TATGCTTAGTGGTATGAAAG+GGG 0.608048 4.3:-18539477 MS.gene023194:CDS
GACACATTAAAAGTTCTGCC+TGG 0.608452 4.3:-18538122 MS.gene023194:CDS
TCAACCGGACCTAAACCGGT+TGG 0.610393 4.3:-18539794 MS.gene023194:CDS
ATAGTTGCAATGGTGGGTGA+CGG 0.612936 4.3:-18534863 MS.gene023194:CDS
AGTATTGATTGGAGTCTTAG+GGG 0.613540 4.3:-18535529 MS.gene023194:CDS
TTGGTATGGCAATTGGAGCT+GGG 0.615027 4.3:-18534805 MS.gene023194:CDS
TAAACCGGTTGGAGATAGTA+CGG 0.617219 4.3:-18539783 MS.gene023194:CDS
CGAGTCTATACCTGTTTCGA+AGG 0.617498 4.3:-18538030 MS.gene023194:CDS
ATCAATGCATCTGTCATTGG+AGG 0.619885 4.3:-18538005 MS.gene023194:CDS
CTGTAGTTCCCAAAGCAACA+AGG 0.623003 4.3:+18538585 None:intergenic
ACAGGTGTTGGGGCTAACAA+TGG 0.625686 4.3:-18536468 MS.gene023194:CDS
GGAAGCTTGATTCCCAGTGA+AGG 0.626009 4.3:+18534611 None:intergenic
CATGGATGATTGGTTGAAGT+GGG 0.626764 4.3:-18538699 MS.gene023194:CDS
TGGTAACAGGAAGCTGCTGG+TGG 0.634413 4.3:-18535643 MS.gene023194:CDS
TTTCAATAGAAACCTCGTCA+AGG 0.635047 4.3:-18539983 MS.gene023194:intron
GGCTTGAATTACACCGTCGA+CGG 0.636046 4.3:+18540041 None:intergenic
CCAGGTAACAATACCATCAG+CGG 0.638825 4.3:+18538088 None:intergenic
GTGGTTGGACAGTTCACGAT+CGG 0.640067 4.3:-18539761 MS.gene023194:CDS
TATCTGACTCAAGACTGTAT+CGG 0.640076 4.3:+18537932 None:intergenic
ACTCACACTAAGAAGCAAGC+TGG 0.641334 4.3:+18539256 None:intergenic
CACCTTGGCAACAGAGACAG+TGG 0.642911 4.3:+18536353 None:intergenic
TGGTAGCATAGTTGCAATGG+TGG 0.646969 4.3:-18534870 MS.gene023194:CDS
AAGACAGGAACTCTAACTCA+GGG 0.647613 4.3:-18536381 MS.gene023194:CDS
GATTCCCCTCTTCTTCATGG+GGG 0.647766 4.3:-18538783 MS.gene023194:CDS
GTTGGAGATAGTACGGTGGT+TGG 0.649965 4.3:-18539776 MS.gene023194:CDS
GTTTCTATTGAAAACGACGT+CGG 0.653328 4.3:+18539993 None:intergenic
CATGCACCAGCAACCCATGG+TGG 0.653724 4.3:+18534590 None:intergenic
GGTGTGCAGTGCATTATAGA+CGG 0.653890 4.3:-18535851 MS.gene023194:CDS
GTAAATGAGAGTATGGTGAC+TGG 0.657765 4.3:-18538053 MS.gene023194:CDS
TGGGAATCAAGCTTCCACCA+TGG 0.659512 4.3:-18534604 MS.gene023194:CDS
ATTTGGAATGTCTTGCCAAG+GGG 0.662416 4.3:-18538448 MS.gene023194:CDS
CCAGTTTAAGAAATTCTCCA+CGG 0.666614 4.3:+18536316 None:intergenic
ATTAGCGTTAAACCTTGACG+AGG 0.671055 4.3:+18539971 None:intergenic
ACATTAAGCTCACTCAACAA+AGG 0.672540 4.3:+18539434 None:intergenic
TTAGTGGTATGAAAGGGGTG+AGG 0.677514 4.3:-18539472 MS.gene023194:CDS
GTTGGACAGTTCACGATCGG+CGG 0.678514 4.3:-18539758 MS.gene023194:CDS
TCGCCAAACCAAGTGCACAT+GGG 0.686508 4.3:+18536514 None:intergenic
GTGTTTGCAGGAATGGACCG+TGG 0.689642 4.3:-18536333 MS.gene023194:CDS
GATCGGCGGTATGACATGTG+CGG 0.691196 4.3:-18539744 MS.gene023194:CDS
GACACCAACTGCTGTCATGG+TGG 0.692490 4.3:-18536493 MS.gene023194:CDS
GGTAGCATAGTTGCAATGGT+GGG 0.692738 4.3:-18534869 MS.gene023194:CDS
ACCGTCGACGGACATGAGAG+CGG 0.693610 4.3:+18540053 None:intergenic
GTTGCCACCATGACAGCAGT+TGG 0.695583 4.3:+18536489 None:intergenic
CAGTGAAGGAAATAAAACCC+CGG 0.701022 4.3:+18534625 None:intergenic
GCTGATGGTATTGTTACCTG+GGG 0.702676 4.3:-18538086 MS.gene023194:CDS
TGGAATAGCAGAGAAGTCTG+AGG 0.707769 4.3:+18535880 None:intergenic
CCAATGAATTAAAATCAGGG+TGG 0.720072 4.3:-18535913 MS.gene023194:CDS
ACTTCAACCAATCATCCATG+AGG 0.728611 4.3:+18538702 None:intergenic
ACCGGTTGGAGATAGTACGG+TGG 0.764274 4.3:-18539780 MS.gene023194:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACATATTTTGTTTAAATTTT+AGG - chr4.3:18538074-18538093 MS.gene023194:CDS 10.0%
!!! TTTCTATAATATTTTCTTTT+TGG - chr4.3:18539342-18539361 MS.gene023194:CDS 10.0%
!! GAAAAGAAAAGAAAAAATAT+TGG + chr4.3:18536520-18536539 None:intergenic 15.0%
!! TTTATGAATAATTCTATGTA+AGG + chr4.3:18537724-18537743 None:intergenic 15.0%
!!! ATTGTTATTATCTTTAATGA+AGG - chr4.3:18538931-18538950 MS.gene023194:intron 15.0%
!!! TATAATATTTTCTTTTTGGT+TGG - chr4.3:18539346-18539365 MS.gene023194:CDS 15.0%
!! AAATATGGCTATAGATTAAA+GGG + chr4.3:18535490-18535509 None:intergenic 20.0%
!! AACAGATATAGAAAACATAA+GGG + chr4.3:18538170-18538189 None:intergenic 20.0%
!! ACAAGAAACTAAACAAAATA+AGG + chr4.3:18535865-18535884 None:intergenic 20.0%
!! CAAAATAACAAGAACAAATA+TGG + chr4.3:18535505-18535524 None:intergenic 20.0%
!! CAAGAAACTAAACAAAATAA+GGG + chr4.3:18535864-18535883 None:intergenic 20.0%
!! CTTATAACATTTGTATTGTT+GGG - chr4.3:18536242-18536261 MS.gene023194:intron 20.0%
!! TAAAATGCCAAAACATTATT+AGG + chr4.3:18538593-18538612 None:intergenic 20.0%
!! TACACTATCTATTGAAATTT+GGG + chr4.3:18537282-18537301 None:intergenic 20.0%
!! TTACACTATCTATTGAAATT+TGG + chr4.3:18537283-18537302 None:intergenic 20.0%
!!! ATGACAGTTATAACAAATTT+TGG - chr4.3:18539698-18539717 MS.gene023194:CDS 20.0%
!!! ATTCAACAGAGTTTTATATT+AGG + chr4.3:18537391-18537410 None:intergenic 20.0%
!!! CATATTTGTTCTTGTTATTT+TGG - chr4.3:18535503-18535522 MS.gene023194:CDS 20.0%
!!! GTGTTTTGGTAAAAAAAATT+TGG - chr4.3:18538895-18538914 MS.gene023194:intron 20.0%
!!! TGACAGTTATAACAAATTTT+GGG - chr4.3:18539699-18539718 MS.gene023194:CDS 20.0%
!!! TTATTGATTCCAATTATTTC+AGG - chr4.3:18537753-18537772 MS.gene023194:intron 20.0%
!!! TTTTTCTTTTCTTTTCTAGA+TGG - chr4.3:18536524-18536543 MS.gene023194:CDS 20.0%
! AAAATATGTACACAGAAGTA+AGG + chr4.3:18538063-18538082 None:intergenic 25.0%
! AAAATATTGTTCTGACTCTA+CGG + chr4.3:18537674-18537693 None:intergenic 25.0%
! AACAATGGTGTGTTAATTAA+AGG - chr4.3:18538265-18538284 MS.gene023194:intron 25.0%
! AACCTAAATATAAGACAATC+AGG + chr4.3:18536434-18536453 None:intergenic 25.0%
! AAGTTATGTAAATGAGAGTA+TGG - chr4.3:18536658-18536677 MS.gene023194:intron 25.0%
! AATGTATCTTAAGTCATTTG+TGG + chr4.3:18537878-18537897 None:intergenic 25.0%
! ACACTATCTATTGAAATTTG+GGG + chr4.3:18537281-18537300 None:intergenic 25.0%
! ACTAAGTAAAAATGCATACA+TGG + chr4.3:18537493-18537512 None:intergenic 25.0%
! AGTAATAACGAGTATATGAA+TGG + chr4.3:18535978-18535997 None:intergenic 25.0%
! AGTATGATTAAAACCATAAC+TGG - chr4.3:18539529-18539548 MS.gene023194:CDS 25.0%
! ATAAACGTGAGTTTGAATTA+TGG + chr4.3:18537791-18537810 None:intergenic 25.0%
! ATGCCAATGAATTAAAATCA+GGG - chr4.3:18538802-18538821 MS.gene023194:intron 25.0%
! ATTCTTAATATCTTCATCCT+AGG + chr4.3:18534856-18534875 None:intergenic 25.0%
! ATTGAATTATGTATTTGCCA+TGG - chr4.3:18540040-18540059 MS.gene023194:CDS 25.0%
! CAAATATGGCTATAGATTAA+AGG + chr4.3:18535491-18535510 None:intergenic 25.0%
! CAACAGATATAGAAAACATA+AGG + chr4.3:18538171-18538190 None:intergenic 25.0%
! CATACAGAAATTTCATCTAA+CGG - chr4.3:18535739-18535758 MS.gene023194:intron 25.0%
! CTGATACCATGTTAAAATTT+GGG + chr4.3:18537076-18537095 None:intergenic 25.0%
! CTTGAGTCAGATAATTAATT+TGG - chr4.3:18536796-18536815 MS.gene023194:intron 25.0%
! GCTTATAACATTTGTATTGT+TGG - chr4.3:18536241-18536260 MS.gene023194:intron 25.0%
! GTAATAACGAGTATATGAAT+GGG + chr4.3:18535977-18535996 None:intergenic 25.0%
! TAAGATACATTAACTAACTC+AGG - chr4.3:18537887-18537906 MS.gene023194:CDS 25.0%
! TACGTTATATTTGATAAGAC+AGG - chr4.3:18538322-18538341 MS.gene023194:intron 25.0%
! TCATATACTCGTTATTACTT+TGG - chr4.3:18535979-18535998 MS.gene023194:CDS 25.0%
! TCTGATACCATGTTAAAATT+TGG + chr4.3:18537077-18537096 None:intergenic 25.0%
! TGATACCATGTTAAAATTTG+GGG + chr4.3:18537075-18537094 None:intergenic 25.0%
! TGTTGAATTATTTAAACCCT+AGG - chr4.3:18534836-18534855 MS.gene023194:CDS 25.0%
! TTCTTAATATCTTCATCCTA+GGG + chr4.3:18534855-18534874 None:intergenic 25.0%
!! ATAATCAGCAAACTTTTGAA+TGG + chr4.3:18536849-18536868 None:intergenic 25.0%
!! CAACTTTCCTAATAATGTTT+TGG - chr4.3:18538583-18538602 MS.gene023194:CDS 25.0%
!! GTATGCATTTTTACTTAGTT+TGG - chr4.3:18537494-18537513 MS.gene023194:intron 25.0%
!! GTCATTTAAAATTCCTTCAA+CGG + chr4.3:18535012-18535031 None:intergenic 25.0%
!! TAATCAGCAAACTTTTGAAT+GGG + chr4.3:18536848-18536867 None:intergenic 25.0%
!! TAATGAAGGAATATGTTTTG+TGG - chr4.3:18538945-18538964 MS.gene023194:intron 25.0%
!! TAATTCATTGGCATCATTTT+GGG + chr4.3:18538796-18538815 None:intergenic 25.0%
!! TATGTTTTCTATATCTGTTG+TGG - chr4.3:18538171-18538190 MS.gene023194:CDS 25.0%
!! TGTTTTATGTCTTTTATAGC+TGG + chr4.3:18538522-18538541 None:intergenic 25.0%
!! TGTTTTCTTAAGAAAATGGA+GGG - chr4.3:18536394-18536413 MS.gene023194:CDS 25.0%
!! TTAATTCATTGGCATCATTT+TGG + chr4.3:18538797-18538816 None:intergenic 25.0%
!! TTATTGGTTGTTAAAGACAA+AGG - chr4.3:18536344-18536363 MS.gene023194:CDS 25.0%
!! TTGATTTTCTTGTGCATAAA+AGG - chr4.3:18539572-18539591 MS.gene023194:CDS 25.0%
!! TTGTTTTCTTAAGAAAATGG+AGG - chr4.3:18536393-18536412 MS.gene023194:CDS 25.0%
!!! AAGAAAATGTGTTTTTTGAC+AGG - chr4.3:18539752-18539771 MS.gene023194:CDS 25.0%
!!! ATTCCAATTATTTCAGGTTT+AGG - chr4.3:18537759-18537778 MS.gene023194:intron 25.0%
!!! ATTTAGGTTGAAATTAGTGA+TGG - chr4.3:18536445-18536464 MS.gene023194:CDS 25.0%
!!! CTTTTCTTAAGAGTTGATAA+AGG - chr4.3:18538997-18539016 MS.gene023194:intron 25.0%
!!! GCTTTGTTTTCTTAAGAAAA+TGG - chr4.3:18536390-18536409 MS.gene023194:CDS 25.0%
!!! GTTTGTTTAGTTACTGATTT+TGG - chr4.3:18534809-18534828 MS.gene023194:CDS 25.0%
!!! TAAATTTTAGGTATACTGCT+GGG - chr4.3:18538086-18538105 MS.gene023194:CDS 25.0%
!!! TTAAATTTTAGGTATACTGC+TGG - chr4.3:18538085-18538104 MS.gene023194:CDS 25.0%
!!! TTTGTTTTGAAGTAAAGCAA+CGG + chr4.3:18534704-18534723 None:intergenic 25.0%
AAATATTGTTCTGACTCTAC+GGG + chr4.3:18537673-18537692 None:intergenic 30.0%
AAGCCTAAACCTGAAATAAT+TGG + chr4.3:18537765-18537784 None:intergenic 30.0%
AATGGTGTGTTAATTAAAGG+AGG - chr4.3:18538268-18538287 MS.gene023194:intron 30.0%
ACACCAGCAATAACTAAAAA+TGG + chr4.3:18537469-18537488 None:intergenic 30.0%
ACTCATCAAAGAAGTGAAAA+TGG + chr4.3:18538755-18538774 None:intergenic 30.0%
ACTTTCTTTACCACAAAGAA+TGG + chr4.3:18537523-18537542 None:intergenic 30.0%
ATGAACTAATGCAACTCTTA+TGG + chr4.3:18535715-18535734 None:intergenic 30.0%
ATTGATGTTATGGTCAAACT+TGG - chr4.3:18539727-18539746 MS.gene023194:CDS 30.0%
ATTTCTATGATGCCTATTAG+AGG - chr4.3:18538630-18538649 MS.gene023194:CDS 30.0%
CATTATTGACACTATTGTGT+TGG - chr4.3:18537968-18537987 MS.gene023194:CDS 30.0%
CGTTAGATGAAATTTCTGTA+TGG + chr4.3:18535741-18535760 None:intergenic 30.0%
CTAACTCATCCTTAAAAAAC+CGG + chr4.3:18537257-18537276 None:intergenic 30.0%
CTATAAAAAAAACGATGACG+CGG + chr4.3:18535773-18535792 None:intergenic 30.0%
GAAATATATACAAACCTCCT+TGG + chr4.3:18539326-18539345 None:intergenic 30.0%
GATGCCAATGAATTAAAATC+AGG - chr4.3:18538801-18538820 MS.gene023194:intron 30.0%
GTCCTGATTGTCTTATATTT+AGG - chr4.3:18536429-18536448 MS.gene023194:CDS 30.0%
TAGAAATGGTTCAACAAACA+TGG - chr4.3:18536106-18536125 MS.gene023194:intron 30.0%
TATAAAACTATCCCTATCCA+CGG + chr4.3:18539493-18539512 None:intergenic 30.0%
TTATGCACAAGAAAATCAAC+AGG + chr4.3:18539571-18539590 None:intergenic 30.0%
TTATGGAGCATAAAATTCTG+TGG + chr4.3:18535698-18535717 None:intergenic 30.0%
TTGGCTATATTATGCAATGT+AGG + chr4.3:18537323-18537342 None:intergenic 30.0%
TTTCCCAATACTATCAATGT+AGG + chr4.3:18536953-18536972 None:intergenic 30.0%
! AGTCAAGATGAGATTGTTTT+AGG - chr4.3:18535173-18535192 MS.gene023194:intron 30.0%
! CATAAGTATTTCTACTGAAG+TGG - chr4.3:18539105-18539124 MS.gene023194:intron 30.0%
! GATAATTAATTTGGTCGAGA+CGG - chr4.3:18536805-18536824 MS.gene023194:intron 30.0%
! GGAATTTTAAATGACATCAC+CGG - chr4.3:18535017-18535036 MS.gene023194:intron 30.0%
! GTTTTCTTAAGAAAATGGAG+GGG - chr4.3:18536395-18536414 MS.gene023194:CDS 30.0%
! TCAAGTATTGTAGTAAGTCT+TGG + chr4.3:18540215-18540234 None:intergenic 30.0%
! TCTTGAGAGAGTATATAAAG+AGG - chr4.3:18537210-18537229 MS.gene023194:intron 30.0%
! TGCTGATTATGTAAGTATTG+TGG - chr4.3:18536859-18536878 MS.gene023194:intron 30.0%
! TGCTTTAAACTCAAACCTTA+GGG - chr4.3:18535623-18535642 MS.gene023194:CDS 30.0%
! TGTGTTGATGAGAGATAATT+TGG - chr4.3:18539965-18539984 MS.gene023194:intron 30.0%
! TTTTATCGTAGGAATCTAGT+AGG + chr4.3:18534561-18534580 None:intergenic 30.0%
!! AAATTTTAGGTATACTGCTG+GGG - chr4.3:18538087-18538106 MS.gene023194:CDS 30.0%
!! ACAAAGTGGTTTCCATTTTT+CGG + chr4.3:18538142-18538161 None:intergenic 30.0%
!! AGAACTTTTAATGTGTCACT+AGG + chr4.3:18536593-18536612 None:intergenic 30.0%
!! ATACTGTTGATTCCTCTAAT+AGG + chr4.3:18538645-18538664 None:intergenic 30.0%
!! GTCAAGATGAGATTGTTTTA+GGG - chr4.3:18535174-18535193 MS.gene023194:intron 30.0%
!! TAATTTTGAGTGCAGTTTCA+AGG - chr4.3:18539382-18539401 MS.gene023194:CDS 30.0%
!! TGTATTGTTGGGAAAGTATT+TGG - chr4.3:18536253-18536272 MS.gene023194:intron 30.0%
!!! AAATGTGTTTTTTGACAGGT+TGG - chr4.3:18539756-18539775 MS.gene023194:CDS 30.0%
!!! CTTCCATTTTTAGTTATTGC+TGG - chr4.3:18537463-18537482 MS.gene023194:intron 30.0%
!!! TCAAGATGAGATTGTTTTAG+GGG - chr4.3:18535175-18535194 MS.gene023194:intron 30.0%
AAGAATGCAATTGAAGATGC+AGG - chr4.3:18534870-18534889 MS.gene023194:CDS 35.0%
AATATAGCCAATCCAAAGCT+TGG - chr4.3:18537332-18537351 MS.gene023194:intron 35.0%
AATGACAGAGCTACAATTGT+AGG + chr4.3:18537952-18537971 None:intergenic 35.0%
ACATAAGGGCAAAAACAAAG+TGG + chr4.3:18538156-18538175 None:intergenic 35.0%
ACATTAAGCTCACTCAACAA+AGG + chr4.3:18535287-18535306 None:intergenic 35.0%
AGAAGCTTCTGTTGTTATAG+AGG - chr4.3:18539231-18539250 MS.gene023194:intron 35.0%
AGTATGCTTAGTGGTATGAA+AGG - chr4.3:18535239-18535258 MS.gene023194:intron 35.0%
AGTATTCAACTAACTTCCAC+CGG - chr4.3:18534499-18534518 MS.gene023194:CDS 35.0%
AGTTGAGCTCATTGTCAAAA+AGG + chr4.3:18538568-18538587 None:intergenic 35.0%
AGTTTGGATTCCATTCTTTG+TGG - chr4.3:18537510-18537529 MS.gene023194:intron 35.0%
ATAAAAACCATCCAAGAGCA+CGG + chr4.3:18536885-18536904 None:intergenic 35.0%
ATAGGCATCATAGAAATGCA+AGG + chr4.3:18538627-18538646 None:intergenic 35.0%
ATGTTCCATGCAAAAGATGT+TGG + chr4.3:18539431-18539450 None:intergenic 35.0%
CAATACTATCAATGTAGGCA+GGG + chr4.3:18536948-18536967 None:intergenic 35.0%
CACAAATCAATGCAAAAGCA+TGG + chr4.3:18535897-18535916 None:intergenic 35.0%
CACATTAAAGCTACCAAAGT+AGG - chr4.3:18536761-18536780 MS.gene023194:CDS 35.0%
CCAATGAATTAAAATCAGGG+TGG - chr4.3:18538805-18538824 MS.gene023194:intron 35.0%
CCAGTTTAAGAAATTCTCCA+CGG + chr4.3:18538405-18538424 None:intergenic 35.0%
CTAACTCATCCTTACAAAAC+CGG + chr4.3:18537051-18537070 None:intergenic 35.0%
GAAGCTTCTGTTGTTATAGA+GGG - chr4.3:18539232-18539251 MS.gene023194:intron 35.0%
GAGTATATGAATGGGATATG+AGG + chr4.3:18535969-18535988 None:intergenic 35.0%
GTATGCTTAGTGGTATGAAA+GGG - chr4.3:18535240-18535259 MS.gene023194:intron 35.0%
GTGGAAGTTAGTTGAATACT+CGG + chr4.3:18534499-18534518 None:intergenic 35.0%
GTTATTGCAATTGAAGATGC+AGG - chr4.3:18535122-18535141 MS.gene023194:intron 35.0%
GTTCGTTCATTCCAAAAAGA+TGG - chr4.3:18539828-18539847 MS.gene023194:CDS 35.0%
GTTTCTATTGAAAACGACGT+CGG + chr4.3:18534728-18534747 None:intergenic 35.0%
TAATGGTTACAGGAGATAAC+TGG - chr4.3:18539281-18539300 MS.gene023194:CDS 35.0%
TATCTGACTCAAGACTGTAT+CGG + chr4.3:18536789-18536808 None:intergenic 35.0%
TATGCTTAGTGGTATGAAAG+GGG - chr4.3:18535241-18535260 MS.gene023194:intron 35.0%
TCCAAACGATTGCTTATTTG+AGG - chr4.3:18539033-18539052 MS.gene023194:intron 35.0%
TCCTCAAATAAGCAATCGTT+TGG + chr4.3:18539037-18539056 None:intergenic 35.0%
TCTTCTTTGCTTATCACGTT+TGG + chr4.3:18535098-18535117 None:intergenic 35.0%
TGAAAAACAAAATTGAGCCG+TGG - chr4.3:18539473-18539492 MS.gene023194:CDS 35.0%
TGGAGAATTTCTTAAACTGG+TGG - chr4.3:18538405-18538424 MS.gene023194:CDS 35.0%
TGGTACGGCAATAATATTGT+AGG + chr4.3:18540066-18540085 None:intergenic 35.0%
TTACATCAGCAGAATCAGAA+AGG + chr4.3:18535670-18535689 None:intergenic 35.0%
TTATCTCCTGTAACCATTAC+AGG + chr4.3:18539280-18539299 None:intergenic 35.0%
TTGGGCAGATATTGATGTTA+TGG - chr4.3:18539717-18539736 MS.gene023194:CDS 35.0%
TTTCAATAGAAACCTCGTCA+AGG - chr4.3:18534735-18534754 MS.gene023194:CDS 35.0%
! AAACTTTTGAATGGGAGCTT+TGG + chr4.3:18536840-18536859 None:intergenic 35.0%
! AACATCTTTTGCATGGAACA+TGG - chr4.3:18539430-18539449 MS.gene023194:CDS 35.0%
! AAGGAATATGTTTTGTGGAG+AGG - chr4.3:18538950-18538969 MS.gene023194:intron 35.0%
! AGGAATATGTTTTGTGGAGA+GGG - chr4.3:18538951-18538970 MS.gene023194:intron 35.0%
! AGTGTCATTCAATTTGGGAT+TGG - chr4.3:18536050-18536069 MS.gene023194:intron 35.0%
! CAACTATGCTACCATCTTTT+TGG + chr4.3:18539842-18539861 None:intergenic 35.0%
! CGTTATTACTTTGGAGATGT+GGG - chr4.3:18535988-18536007 MS.gene023194:CDS 35.0%
! CTGCCTACATTGATAGTATT+GGG - chr4.3:18536947-18536966 MS.gene023194:intron 35.0%
! CTGCTTTAAACTCAAACCTT+AGG - chr4.3:18535622-18535641 MS.gene023194:CDS 35.0%
! CTTGAGAAGAGTATAGAAAG+AGG - chr4.3:18537004-18537023 MS.gene023194:intron 35.0%
! GAAAACCAACATCTTTTGCA+TGG - chr4.3:18539423-18539442 MS.gene023194:CDS 35.0%
! GAGTTCTACTAGCTTCTTAA+TGG + chr4.3:18536309-18536328 None:intergenic 35.0%
! GATCTAGAACTAAGAACTTG+AGG + chr4.3:18535320-18535339 None:intergenic 35.0%
! TAACTCAGGTACCATTCTTT+TGG - chr4.3:18537901-18537920 MS.gene023194:CDS 35.0%
! TATTTGGAATGTCTTGCCAA+GGG - chr4.3:18536269-18536288 MS.gene023194:intron 35.0%
! TCGTTATTACTTTGGAGATG+TGG - chr4.3:18535987-18536006 MS.gene023194:CDS 35.0%
! TCTATTTCTCTTTCTTCCAC+AGG + chr4.3:18536554-18536573 None:intergenic 35.0%
! TGAGAGAGTATATAAAGAGG+AGG - chr4.3:18537213-18537232 MS.gene023194:intron 35.0%
! TGGTGAGTGTCATTCAATTT+GGG - chr4.3:18536045-18536064 MS.gene023194:intron 35.0%
! TTGACACTATTGTGTTGGTA+AGG - chr4.3:18537973-18537992 MS.gene023194:CDS 35.0%
! TTGGTGAGTGTCATTCAATT+TGG - chr4.3:18536044-18536063 MS.gene023194:intron 35.0%
!! AAATGGAAGTATTTCCCACT+AGG + chr4.3:18537452-18537471 None:intergenic 35.0%
!! AGTATTGATTGGAGTCTTAG+GGG - chr4.3:18539189-18539208 MS.gene023194:intron 35.0%
!! AGTTCTTAGTTCTAGATCGT+TGG - chr4.3:18535322-18535341 MS.gene023194:intron 35.0%
!! CTTTGGTAGCTTTAATGTGA+AGG + chr4.3:18536760-18536779 None:intergenic 35.0%
!! GAGTATTGATTGGAGTCTTA+GGG - chr4.3:18539188-18539207 MS.gene023194:intron 35.0%
!! TTAGGCCCCAAATTTTAACA+TGG - chr4.3:18537067-18537086 MS.gene023194:intron 35.0%
!!! CCACCCTGATTTTAATTCAT+TGG + chr4.3:18538808-18538827 None:intergenic 35.0%
!!! CGGTTTTTTAAGGATGAGTT+AGG - chr4.3:18537255-18537274 MS.gene023194:intron 35.0%
!!! GCAAAAGATGTTGGTTTTCT+AGG + chr4.3:18539422-18539441 None:intergenic 35.0%
!!! GTTTTGGAAAGTATGCTTAG+TGG - chr4.3:18535230-18535249 MS.gene023194:intron 35.0%
AAATTACCCCCATGAAGAAG+AGG + chr4.3:18535944-18535963 None:intergenic 40.0%
AACAAAATTGAGCCGTGGAT+AGG - chr4.3:18539478-18539497 MS.gene023194:CDS 40.0%
AACCAATCATCCATGAGGAA+AGG + chr4.3:18536014-18536033 None:intergenic 40.0%
AAGACAGGAACTCTAACTCA+GGG - chr4.3:18538337-18538356 MS.gene023194:intron 40.0%
AAGCAGAGAGTAACCATCAT+TGG + chr4.3:18538449-18538468 None:intergenic 40.0%
AAGGACACCATGCAAATTGA+TGG + chr4.3:18536741-18536760 None:intergenic 40.0%
AATCCAAAGCTTGGAGAAAG+AGG - chr4.3:18537341-18537360 MS.gene023194:intron 40.0%
AATTACCCCCATGAAGAAGA+GGG + chr4.3:18535943-18535962 None:intergenic 40.0%
ACAAAATTGAGCCGTGGATA+GGG - chr4.3:18539479-18539498 MS.gene023194:CDS 40.0%
ACAACCAATAAAGCTGTTGC+AGG + chr4.3:18536335-18536354 None:intergenic 40.0%
ACTTCAACCAATCATCCATG+AGG + chr4.3:18536019-18536038 None:intergenic 40.0%
AGATGGTAGCATAGTTGCAA+TGG - chr4.3:18539845-18539864 MS.gene023194:CDS 40.0%
AGCAGAGAGTAACCATCATT+GGG + chr4.3:18538448-18538467 None:intergenic 40.0%
AGCTGAGATCTTACATGAAC+CGG - chr4.3:18534899-18534918 MS.gene023194:CDS 40.0%
AGGTTGGCATTCAAGATGTT+AGG - chr4.3:18539772-18539791 MS.gene023194:CDS 40.0%
ATCAATGCATCTGTCATTGG+AGG - chr4.3:18536713-18536732 MS.gene023194:intron 40.0%
ATCAGAGCTTGTCGAATTCA+AGG - chr4.3:18537091-18537110 MS.gene023194:intron 40.0%
ATCAGCAGAATCAGAAAGGA+TGG + chr4.3:18535666-18535685 None:intergenic 40.0%
ATCCTTAGAAAGAGCTCAGA+TGG - chr4.3:18538294-18538313 MS.gene023194:intron 40.0%
ATTAGCGTTAAACCTTGACG+AGG + chr4.3:18534750-18534769 None:intergenic 40.0%
ATTTACATAACTTGAGCCCC+AGG + chr4.3:18536651-18536670 None:intergenic 40.0%
CACAATGAGTTGCAAAGAGT+CGG - chr4.3:18537598-18537617 MS.gene023194:intron 40.0%
CAGAGAGTTCGTCTATGTTT+CGG - chr4.3:18535429-18535448 MS.gene023194:CDS 40.0%
CAGTGAAGGAAATAAAACCC+CGG + chr4.3:18540096-18540115 None:intergenic 40.0%
CATCACCGGAGTAAAAAAAG+CGG - chr4.3:18535031-18535050 MS.gene023194:intron 40.0%
CATTCTACACTAACACCCTA+AGG + chr4.3:18535641-18535660 None:intergenic 40.0%
CCAATACTATCAATGTAGGC+AGG + chr4.3:18536949-18536968 None:intergenic 40.0%
CCGTGGAGAATTTCTTAAAC+TGG - chr4.3:18538402-18538421 MS.gene023194:CDS 40.0%
CTCATTGTCAAAAAGGTGGA+AGG + chr4.3:18538561-18538580 None:intergenic 40.0%
CTTGAAAACGAGACCAGTTA+TGG + chr4.3:18539545-18539564 None:intergenic 40.0%
GAAGTATGTTCTGATCAGGT+TGG - chr4.3:18539055-18539074 MS.gene023194:intron 40.0%
GACACATTAAAAGTTCTGCC+TGG - chr4.3:18536596-18536615 MS.gene023194:CDS 40.0%
GAGATCAATGCATCTGTCAT+TGG - chr4.3:18536710-18536729 MS.gene023194:intron 40.0%
GCTTTCAGAGCTCTTAGAAA+TGG - chr4.3:18536092-18536111 MS.gene023194:intron 40.0%
GGCAATAATATTGTAGGCCA+TGG + chr4.3:18540060-18540079 None:intergenic 40.0%
GGTTGGCATTCAAGATGTTA+GGG - chr4.3:18539773-18539792 MS.gene023194:CDS 40.0%
GGTTGTAGGTGTTTGTTCTT+TGG - chr4.3:18535196-18535215 MS.gene023194:intron 40.0%
TAAACCGGTTGGAGATAGTA+CGG - chr4.3:18534935-18534954 MS.gene023194:CDS 40.0%
TAAGACAGGAACTCTAACTC+AGG - chr4.3:18538336-18538355 MS.gene023194:intron 40.0%
TAGAAGCCATTCTCGCATAA+GGG + chr4.3:18535400-18535419 None:intergenic 40.0%
TCAGAGCTTGTCGAATTCAA+GGG - chr4.3:18537092-18537111 MS.gene023194:intron 40.0%
TCTGTTTGTGCTCTTCTGTA+TGG - chr4.3:18536170-18536189 MS.gene023194:intron 40.0%
TGAGCTCATTGTCAAAAAGG+TGG + chr4.3:18538565-18538584 None:intergenic 40.0%
TGCGTATGCGACAATACAAA+AGG + chr4.3:18538483-18538502 None:intergenic 40.0%
TGGAGCATAAAATTCTGTGG+AGG + chr4.3:18535695-18535714 None:intergenic 40.0%
TGTAGGTGTTTGTTCTTTGG+TGG - chr4.3:18535199-18535218 MS.gene023194:intron 40.0%
TTAGAAGCCATTCTCGCATA+AGG + chr4.3:18535401-18535420 None:intergenic 40.0%
! AGAGTCTTATCTATCCGATG+TGG + chr4.3:18536986-18537005 None:intergenic 40.0%
! ATTTGGAATGTCTTGCCAAG+GGG - chr4.3:18536270-18536289 MS.gene023194:intron 40.0%
! CATGGATGATTGGTTGAAGT+GGG - chr4.3:18536019-18536038 MS.gene023194:intron 40.0%
! CCTGCCTACATTGATAGTAT+TGG - chr4.3:18536946-18536965 MS.gene023194:intron 40.0%
! GAGAAGAGTATAGAAAGAGG+AGG - chr4.3:18537007-18537026 MS.gene023194:intron 40.0%
! GAGTCTTATCTATCCGATGT+GGG + chr4.3:18536985-18537004 None:intergenic 40.0%
! GTAAATGAGAGTATGGTGAC+TGG - chr4.3:18536665-18536684 MS.gene023194:intron 40.0%
! GTATTTGGAATGTCTTGCCA+AGG - chr4.3:18536268-18536287 MS.gene023194:intron 40.0%
! GTCACTAGGTTGAATAAGCA+AGG + chr4.3:18536579-18536598 None:intergenic 40.0%
! TCATGGATGATTGGTTGAAG+TGG - chr4.3:18536018-18536037 MS.gene023194:intron 40.0%
! TGAGGAAGTATGTTCTGATC+AGG - chr4.3:18539051-18539070 MS.gene023194:intron 40.0%
! TTACATGAACCGGTTTCAAC+CGG - chr4.3:18534909-18534928 MS.gene023194:CDS 40.0%
! TTGTTCTTTGGTGGATGCAA+GGG - chr4.3:18535208-18535227 MS.gene023194:intron 40.0%
! TTTGTTCTTTGGTGGATGCA+AGG - chr4.3:18535207-18535226 MS.gene023194:intron 40.0%
!! ATGGATGTCCTTGTTGCTTT+GGG - chr4.3:18536125-18536144 MS.gene023194:intron 40.0%
!! CCTTAAAAAACCGGCTTGTA+AGG + chr4.3:18537248-18537267 None:intergenic 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG - chr4.3:18537049-18537068 MS.gene023194:intron 40.0%
!! GGAGTATTGATTGGAGTCTT+AGG - chr4.3:18539187-18539206 MS.gene023194:intron 40.0%
!! GTGGCTTTAGCTACTTCATT+AGG - chr4.3:18535056-18535075 MS.gene023194:intron 40.0%
!! TCTTTCTCCAAGCTTTGGAT+TGG + chr4.3:18537342-18537361 None:intergenic 40.0%
!! TGTAATATCGCTTTTGCCAG+CGG + chr4.3:18538723-18538742 None:intergenic 40.0%
!! TTGAAGAAAGTGCCAAGACT+GGG - chr4.3:18539146-18539165 MS.gene023194:intron 40.0%
!!! AGTCGGCATTTAGTTTTCCT+GGG - chr4.3:18537615-18537634 MS.gene023194:intron 40.0%
!!! CCTTACAAGCCGGTTTTTTA+AGG - chr4.3:18537245-18537264 MS.gene023194:intron 40.0%
!!! GAGATTGTTTTAGGGGTTGT+AGG - chr4.3:18535182-18535201 MS.gene023194:intron 40.0%
!!! GGGGTTTTATTTCCTTCACT+GGG - chr4.3:18540095-18540114 MS.gene023194:CDS 40.0%
!!! GTTGACGTCGTTTTTATCGT+AGG + chr4.3:18534572-18534591 None:intergenic 40.0%
!!! GTTTTGAAGTAAAGCAACGG+AGG + chr4.3:18534701-18534720 None:intergenic 40.0%
AAAAACGACGTCAACGACGA+CGG - chr4.3:18534577-18534596 MS.gene023194:CDS 45.0%
AATGGGAATCACGCCTGTAA+TGG - chr4.3:18539264-18539283 MS.gene023194:CDS 45.0%
ACATTGCTAGTCCATGTCAC+AGG + chr4.3:18537415-18537434 None:intergenic 45.0%
ACTCACACTAAGAAGCAAGC+TGG + chr4.3:18535465-18535484 None:intergenic 45.0%
ACTTCTCTGCTATTCCAGGA+AGG - chr4.3:18538844-18538863 MS.gene023194:intron 45.0%
AGATTCCCCTCTTCTTCATG+GGG - chr4.3:18535934-18535953 MS.gene023194:CDS 45.0%
AGGGACACATGTCTCATTAG+AGG - chr4.3:18538970-18538989 MS.gene023194:intron 45.0%
AGTCCCACATCGGATAGATA+AGG - chr4.3:18536979-18536998 MS.gene023194:intron 45.0%
ATACTCCATTGCACGCTACA+AGG + chr4.3:18539174-18539193 None:intergenic 45.0%
ATAGAGGGCCTCCAGAAAAT+GGG - chr4.3:18539247-18539266 MS.gene023194:intron 45.0%
ATCACGCCTGTAATGGTTAC+AGG - chr4.3:18539271-18539290 MS.gene023194:CDS 45.0%
ATCTATCCGATGTGGGACTT+GGG + chr4.3:18536978-18536997 None:intergenic 45.0%
ATTACCCCCATGAAGAAGAG+GGG + chr4.3:18535942-18535961 None:intergenic 45.0%
CAAAGCTTGGAGAAAGAGGA+GGG - chr4.3:18537345-18537364 MS.gene023194:intron 45.0%
CACCATCTGAGCTCTTTCTA+AGG + chr4.3:18538299-18538318 None:intergenic 45.0%
CAGATTCCCCTCTTCTTCAT+GGG - chr4.3:18535933-18535952 MS.gene023194:CDS 45.0%
CAGGTAACAATACCATCAGC+GGG + chr4.3:18536632-18536651 None:intergenic 45.0%
CATTCAAGATGTTAGGGCAG+AGG - chr4.3:18539779-18539798 MS.gene023194:CDS 45.0%
CATTGCTAGTCCATGTCACA+GGG + chr4.3:18537414-18537433 None:intergenic 45.0%
CCAGGTAACAATACCATCAG+CGG + chr4.3:18536633-18536652 None:intergenic 45.0%
CGAGTCTATACCTGTTTCGA+AGG - chr4.3:18536688-18536707 MS.gene023194:intron 45.0%
CGCTGATGGTATTGTTACCT+GGG - chr4.3:18536631-18536650 MS.gene023194:intron 45.0%
CTACCTGCAAGCCAAAAGAA+TGG + chr4.3:18537915-18537934 None:intergenic 45.0%
CTGTAGTTCCCAAAGCAACA+AGG + chr4.3:18536136-18536155 None:intergenic 45.0%
CTTCTCTGCTATTCCAGGAA+GGG - chr4.3:18538845-18538864 MS.gene023194:intron 45.0%
GAAAAACCCAAGTCCCACAT+CGG - chr4.3:18536969-18536988 MS.gene023194:intron 45.0%
GACTGTATCGGATCCTACTT+TGG + chr4.3:18536777-18536796 None:intergenic 45.0%
GATGAATGGCTGCCGAAAAA+TGG - chr4.3:18538127-18538146 MS.gene023194:CDS 45.0%
GCAGATGTTGGTATGGCAAT+TGG - chr4.3:18539906-18539925 MS.gene023194:intron 45.0%
GCTGATGGTATTGTTACCTG+GGG - chr4.3:18536632-18536651 MS.gene023194:intron 45.0%
GGTAGCATAGTTGCAATGGT+GGG - chr4.3:18539849-18539868 MS.gene023194:CDS 45.0%
GGTGTGCAGTGCATTATAGA+CGG - chr4.3:18538867-18538886 MS.gene023194:intron 45.0%
TAGAAGCCCTTATGCGAGAA+TGG - chr4.3:18535391-18535410 MS.gene023194:intron 45.0%
TATAGAGGGCCTCCAGAAAA+TGG - chr4.3:18539246-18539265 MS.gene023194:intron 45.0%
TATCTATCCGATGTGGGACT+TGG + chr4.3:18536979-18536998 None:intergenic 45.0%
TCAACGACGACGGAATTAAC+CGG - chr4.3:18534587-18534606 MS.gene023194:CDS 45.0%
TCAGACTTCTCTGCTATTCC+AGG - chr4.3:18538840-18538859 MS.gene023194:intron 45.0%
TCAGATTCCCCTCTTCTTCA+TGG - chr4.3:18535932-18535951 MS.gene023194:CDS 45.0%
TCTGTTGAATCCCTGTGACA+TGG - chr4.3:18537401-18537420 MS.gene023194:intron 45.0%
TGGAATAGCAGAGAAGTCTG+AGG + chr4.3:18538841-18538860 None:intergenic 45.0%
TGGTAGCATAGTTGCAATGG+TGG - chr4.3:18539848-18539867 MS.gene023194:CDS 45.0%
TTAGTGGTATGAAAGGGGTG+AGG - chr4.3:18535246-18535265 MS.gene023194:intron 45.0%
TTCAACGGAGTTAGAGCAAG+CGG + chr4.3:18534644-18534663 None:intergenic 45.0%
TTCTCTGCTATTCCAGGAAG+GGG - chr4.3:18538846-18538865 MS.gene023194:intron 45.0%
TTGGAGCATACCCAGATGAA+TGG - chr4.3:18538113-18538132 MS.gene023194:CDS 45.0%
TTGGTATGGCAATTGGAGCT+GGG - chr4.3:18539913-18539932 MS.gene023194:intron 45.0%
! AGAGCCTTATCTATCCGATG+TGG + chr4.3:18537193-18537212 None:intergenic 45.0%
! ATGGCGCTCTTACTGGATTT+TGG - chr4.3:18536189-18536208 MS.gene023194:intron 45.0%
! CACTCCTGCAACAGCTTTAT+TGG - chr4.3:18536328-18536347 MS.gene023194:CDS 45.0%
! CATGGATGTCCTTGTTGCTT+TGG - chr4.3:18536124-18536143 MS.gene023194:intron 45.0%
! CTTGGTGCGTGAATAGGTTT+AGG + chr4.3:18537121-18537140 None:intergenic 45.0%
! GAGCCTTATCTATCCGATGT+GGG + chr4.3:18537192-18537211 None:intergenic 45.0%
! GCATTGATCTCCTTCGAAAC+AGG + chr4.3:18536701-18536720 None:intergenic 45.0%
! GCGAGAATGGCTTCTAAAGA+TGG - chr4.3:18535404-18535423 MS.gene023194:intron 45.0%
! GTACTATCTCCAACCGGTTT+AGG + chr4.3:18534936-18534955 None:intergenic 45.0%
! TATAGACGGACAGCGTGTTT+TGG - chr4.3:18538881-18538900 MS.gene023194:intron 45.0%
! TGATTGGTTGAAGTGGGCAT+TGG - chr4.3:18536025-18536044 MS.gene023194:intron 45.0%
! TTTTCGGCAGCCATTCATCT+GGG + chr4.3:18538126-18538145 None:intergenic 45.0%
! TTTTCTAGATGGCAGACCTG+TGG - chr4.3:18536535-18536554 MS.gene023194:CDS 45.0%
!! AAAAACCGGCTTGTAAGGTG+AGG + chr4.3:18537243-18537262 None:intergenic 45.0%
!! AATGGGAGCTTTGGACATCT+GGG + chr4.3:18536831-18536850 None:intergenic 45.0%
!! ATAGTTGCAATGGTGGGTGA+CGG - chr4.3:18539855-18539874 MS.gene023194:CDS 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG + chr4.3:18537042-18537061 None:intergenic 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG - chr4.3:18537039-18537058 MS.gene023194:intron 45.0%
!! CTTGAAGAAAGTGCCAAGAC+TGG - chr4.3:18539145-18539164 MS.gene023194:intron 45.0%
!! GCGTGCAATGGAGTATTGAT+TGG - chr4.3:18539178-18539197 MS.gene023194:intron 45.0%
!! GGAGGTACCATCAATTTGCA+TGG - chr4.3:18536731-18536750 MS.gene023194:intron 45.0%
!! GTAATATCGCTTTTGCCAGC+GGG + chr4.3:18538722-18538741 None:intergenic 45.0%
!! GTTCTGATCAGGTTGGTAAC+AGG - chr4.3:18539062-18539081 MS.gene023194:intron 45.0%
!! TGGAAGTATTTCCCACTAGG+CGG + chr4.3:18537449-18537468 None:intergenic 45.0%
!! TTTGGTGGATGCAAGGGTTT+TGG - chr4.3:18535214-18535233 MS.gene023194:intron 45.0%
!! TTTTTCGGCAGCCATTCATC+TGG + chr4.3:18538127-18538146 None:intergenic 45.0%
!!! CACCACCGCTTTTTTTACTC+CGG + chr4.3:18535039-18535058 None:intergenic 45.0%
!!! CGGGGTTTTATTTCCTTCAC+TGG - chr4.3:18540094-18540113 MS.gene023194:CDS 45.0%
!!! GAGTCGGCATTTAGTTTTCC+TGG - chr4.3:18537614-18537633 MS.gene023194:intron 45.0%
!!! GTACCATTCTTTTGGCTTGC+AGG - chr4.3:18537909-18537928 MS.gene023194:CDS 45.0%
!!! AATATATTTTATTTAAATTC+AGG - chr4.3:18538683-18538702 MS.gene023194:CDS 5.0%
AATAAAACCCCGGCAGCAAC+TGG + chr4.3:18540086-18540105 None:intergenic 50.0%
ACATCTGCAGCAGCTAATGC+AGG + chr4.3:18539894-18539913 None:intergenic 50.0%
ACCACCGTACTATCTCCAAC+CGG + chr4.3:18534942-18534961 None:intergenic 50.0%
AGAGGTTATGCCTGCAGGAA+AGG - chr4.3:18539797-18539816 MS.gene023194:CDS 50.0%
AGCTGCTGCAGATGTTGGTA+TGG - chr4.3:18539899-18539918 MS.gene023194:intron 50.0%
ATGCCCATGTGCACTTGGTT+TGG - chr4.3:18538201-18538220 MS.gene023194:intron 50.0%
ATTGCATGCCCATGTGCACT+TGG - chr4.3:18538196-18538215 MS.gene023194:intron 50.0%
CACCGGAGTAAAAAAAGCGG+TGG - chr4.3:18535034-18535053 MS.gene023194:intron 50.0%
CCAAAGCTTGGAGAAAGAGG+AGG - chr4.3:18537344-18537363 MS.gene023194:intron 50.0%
CCGCTGATGGTATTGTTACC+TGG - chr4.3:18536630-18536649 MS.gene023194:intron 50.0%
CCTCCTCTTTCTCCAAGCTT+TGG + chr4.3:18537347-18537366 None:intergenic 50.0%
CGACGGAATTAACCGGATTC+AGG - chr4.3:18534594-18534613 MS.gene023194:CDS 50.0%
CGGAGTAAAAAAAGCGGTGG+TGG - chr4.3:18535037-18535056 MS.gene023194:intron 50.0%
CGGATTCAGGTCAGAATCAC+CGG - chr4.3:18534607-18534626 MS.gene023194:CDS 50.0%
CGGTGATTCTGACCTGAATC+CGG + chr4.3:18534609-18534628 None:intergenic 50.0%
CTTCTGTATGGCGCTCTTAC+TGG - chr4.3:18536182-18536201 MS.gene023194:intron 50.0%
GATTCCCCTCTTCTTCATGG+GGG - chr4.3:18535935-18535954 MS.gene023194:CDS 50.0%
GCAATCCTCACCTTACAAGC+CGG - chr4.3:18537235-18537254 MS.gene023194:intron 50.0%
GCAATGCTCACCTTACAAGC+CGG - chr4.3:18537029-18537048 MS.gene023194:intron 50.0%
GCATTAGCTGCTGCAGATGT+TGG - chr4.3:18539894-18539913 MS.gene023194:intron 50.0%
GCGTGTGTGAATTCCGTTGA+AGG - chr4.3:18534996-18535015 MS.gene023194:intron 50.0%
GCTGAGGTAACTCCCAATGA+TGG - chr4.3:18538433-18538452 MS.gene023194:CDS 50.0%
GGAAGCTTGATTCCCAGTGA+AGG + chr4.3:18540110-18540129 None:intergenic 50.0%
GGCCTTTCCTCATGGATGAT+TGG - chr4.3:18536009-18536028 MS.gene023194:CDS 50.0%
GGCTTGAATTACACCGTCGA+CGG + chr4.3:18534680-18534699 None:intergenic 50.0%
GGGAATCAAGCTTCCACCAT+GGG - chr4.3:18540115-18540134 MS.gene023194:CDS 50.0%
GGTACAAAGATTCCCGCTGA+TGG - chr4.3:18536617-18536636 MS.gene023194:CDS 50.0%
GGTGCGTGAATAGGTTTAGG+CGG + chr4.3:18537118-18537137 None:intergenic 50.0%
GGTTTAGGTCCGGTTGAAAC+CGG + chr4.3:18534921-18534940 None:intergenic 50.0%
GGTTTCAACCGGACCTAAAC+CGG - chr4.3:18534920-18534939 MS.gene023194:CDS 50.0%
GTAAGGAGCTCCAACGATCA+GGG + chr4.3:18537707-18537726 None:intergenic 50.0%
GTCCATTCCTGCAAACACCT+TGG + chr4.3:18538383-18538402 None:intergenic 50.0%
GTGGTTGGACAGTTCACGAT+CGG - chr4.3:18534957-18534976 MS.gene023194:intron 50.0%
GTTGGAGATAGTACGGTGGT+TGG - chr4.3:18534942-18534961 MS.gene023194:CDS 50.0%
GTTGGTATGGCAATTGGAGC+TGG - chr4.3:18539912-18539931 MS.gene023194:intron 50.0%
TAAACTGGTGGCTTCTGCTG+AGG - chr4.3:18538417-18538436 MS.gene023194:CDS 50.0%
TAAGGAGCTCCAACGATCAG+GGG + chr4.3:18537706-18537725 None:intergenic 50.0%
TCAGCGGGAATCTTTGTACC+AGG + chr4.3:18536617-18536636 None:intergenic 50.0%
TCATGGTGGCAACAGGTGTT+GGG - chr4.3:18538239-18538258 MS.gene023194:intron 50.0%
TCGCCAAACCAAGTGCACAT+GGG + chr4.3:18538207-18538226 None:intergenic 50.0%
TGAAAGGGGTGAGGCAGTTT+CGG - chr4.3:18535255-18535274 MS.gene023194:intron 50.0%
TGGGAATCAAGCTTCCACCA+TGG - chr4.3:18540114-18540133 MS.gene023194:CDS 50.0%
TGTAAGGAGCTCCAACGATC+AGG + chr4.3:18537708-18537727 None:intergenic 50.0%
! AAGTATTGTGGCCGTGCTCT+TGG - chr4.3:18536871-18536890 MS.gene023194:intron 50.0%
! ATCTCCAACCGGTTTAGGTC+CGG + chr4.3:18534931-18534950 None:intergenic 50.0%
! ATTTTCCAGAACAGCAGCCC+AGG + chr4.3:18537635-18537654 None:intergenic 50.0%
! CAGGCGTGATTCCCATTTTC+TGG + chr4.3:18539261-18539280 None:intergenic 50.0%
! GAAGTATTTCCCACTAGGCG+GGG + chr4.3:18537447-18537466 None:intergenic 50.0%
! GCGTGATTCCCATTTTCTGG+AGG + chr4.3:18539258-18539277 None:intergenic 50.0%
! TCTGTTGCCAAGGTGTTTGC+AGG - chr4.3:18538373-18538392 MS.gene023194:intron 50.0%
! TGCCAAGGTGTTTGCAGGAA+TGG - chr4.3:18538378-18538397 MS.gene023194:CDS 50.0%
!! ACAGGTGTTGGGGCTAACAA+TGG - chr4.3:18538250-18538269 MS.gene023194:intron 50.0%
!! GAATGGGAGCTTTGGACATC+TGG + chr4.3:18536832-18536851 None:intergenic 50.0%
!! GGAAGTATTTCCCACTAGGC+GGG + chr4.3:18537448-18537467 None:intergenic 50.0%
!! TTTGGGCTTGGTGCGTGAAT+AGG + chr4.3:18537127-18537146 None:intergenic 50.0%
AACTGCTCGAGCTGTTGCCA+AGG - chr4.3:18539306-18539325 MS.gene023194:CDS 55.0%
ACCACATCAGCCTTTCCTGC+AGG + chr4.3:18539810-18539829 None:intergenic 55.0%
ACCGGTTGGAGATAGTACGG+TGG - chr4.3:18534938-18534957 MS.gene023194:CDS 55.0%
ACTGCTGTCATGGTGGCAAC+AGG - chr4.3:18538232-18538251 MS.gene023194:intron 55.0%
AGCCACTGTCTCTGTTGCCA+AGG - chr4.3:18538363-18538382 MS.gene023194:intron 55.0%
AGCTCCAACGATCAGGGGTA+AGG + chr4.3:18537701-18537720 None:intergenic 55.0%
AGGAAGCTGCTGGTGGAAAG+TGG - chr4.3:18539082-18539101 MS.gene023194:intron 55.0%
AGGTATACTGCTGGGGCTCT+TGG - chr4.3:18538094-18538113 MS.gene023194:CDS 55.0%
ATGCATGCACCAGCAACCCA+TGG + chr4.3:18540134-18540153 None:intergenic 55.0%
ATTGCCGTACCAGTTGCTGC+CGG - chr4.3:18540074-18540093 MS.gene023194:CDS 55.0%
ATTGTGGCCGTGCTCTTGGA+TGG - chr4.3:18536875-18536894 MS.gene023194:intron 55.0%
CACCTTGGCAACAGAGACAG+TGG + chr4.3:18538368-18538387 None:intergenic 55.0%
CGCTACAAGGATCCCAGTCT+TGG + chr4.3:18539161-18539180 None:intergenic 55.0%
GACACCAACTGCTGTCATGG+TGG - chr4.3:18538225-18538244 MS.gene023194:intron 55.0%
GAGATGTGGGCCTTTCCTCA+TGG - chr4.3:18536001-18536020 MS.gene023194:CDS 55.0%
GATAGTGTTCCCCGCCTAGT+GGG - chr4.3:18537435-18537454 MS.gene023194:intron 55.0%
GATCGGCGGTATGACATGTG+CGG - chr4.3:18534974-18534993 MS.gene023194:intron 55.0%
GATGCCTTACCCCTGATCGT+TGG - chr4.3:18537694-18537713 MS.gene023194:intron 55.0%
GCGAACATCTTCGAGATCGC+CGG + chr4.3:18534539-18534558 None:intergenic 55.0%
GGACATGAGAGCGGCTTCAA+CGG + chr4.3:18534659-18534678 None:intergenic 55.0%
GGCATCAGATGTCTTCCCCT+TGG + chr4.3:18536288-18536307 None:intergenic 55.0%
GGGATCCTTGTAGCGTGCAA+TGG - chr4.3:18539166-18539185 MS.gene023194:intron 55.0%
GTCATGGTGGCAACAGGTGT+TGG - chr4.3:18538238-18538257 MS.gene023194:intron 55.0%
GTCGCCAAACCAAGTGCACA+TGG + chr4.3:18538208-18538227 None:intergenic 55.0%
GTGTTTGCAGGAATGGACCG+TGG - chr4.3:18538385-18538404 MS.gene023194:CDS 55.0%
GTTGCCACCATGACAGCAGT+TGG + chr4.3:18538232-18538251 None:intergenic 55.0%
GTTGGACAGTTCACGATCGG+CGG - chr4.3:18534960-18534979 MS.gene023194:intron 55.0%
TCAACCGGACCTAAACCGGT+TGG - chr4.3:18534924-18534943 MS.gene023194:CDS 55.0%
TGGTAACAGGAAGCTGCTGG+TGG - chr4.3:18539075-18539094 MS.gene023194:intron 55.0%
! AAGCTTCCACCATGGGTTGC+TGG - chr4.3:18540122-18540141 MS.gene023194:CDS 55.0%
! ATGGGTTGCTGGTGCATGCA+TGG - chr4.3:18540133-18540152 MS.gene023194:CDS 55.0%
! CATGGTGGCAACAGGTGTTG+GGG - chr4.3:18538240-18538259 MS.gene023194:intron 55.0%
! GTTTTCCTGGGCTGCTGTTC+TGG - chr4.3:18537627-18537646 MS.gene023194:intron 55.0%
! TGATAGTGTTCCCCGCCTAG+TGG - chr4.3:18537434-18537453 MS.gene023194:intron 55.0%
!! CACCAAGCCCAAAGAGTGCT+GGG - chr4.3:18537134-18537153 MS.gene023194:intron 55.0%
!! GGTTGGTAACAGGAAGCTGC+TGG - chr4.3:18539072-18539091 MS.gene023194:intron 55.0%
AACCCCGGCAGCAACTGGTA+CGG + chr4.3:18540081-18540100 None:intergenic 60.0%
ACCGTCGACGGACATGAGAG+CGG + chr4.3:18534668-18534687 None:intergenic 60.0%
AGGGCAGAGGTTATGCCTGC+AGG - chr4.3:18539792-18539811 MS.gene023194:CDS 60.0%
ATGCACTGCACACCCCTTCC+TGG + chr4.3:18538861-18538880 None:intergenic 60.0%
CAACTAACTTCCACCGGCGC+CGG - chr4.3:18534505-18534524 MS.gene023194:CDS 60.0%
CATGCACCAGCAACCCATGG+TGG + chr4.3:18540131-18540150 None:intergenic 60.0%
CCTCACGCCCAGCACTCTTT+GGG + chr4.3:18537144-18537163 None:intergenic 60.0%
GCCTGCAGGAAAGGCTGATG+TGG - chr4.3:18539806-18539825 MS.gene023194:CDS 60.0%
GGCGACACCAACTGCTGTCA+TGG - chr4.3:18538222-18538241 MS.gene023194:intron 60.0%
TGCTCGAGCTGTTGCCAAGG+AGG - chr4.3:18539309-18539328 MS.gene023194:CDS 60.0%
TTGCCGTACCAGTTGCTGCC+GGG - chr4.3:18540075-18540094 MS.gene023194:CDS 60.0%
! GCACCAAGCCCAAAGAGTGC+TGG - chr4.3:18537133-18537152 MS.gene023194:intron 60.0%
!! AAAGAGTGCTGGGCGTGAGG+GGG - chr4.3:18537144-18537163 MS.gene023194:intron 60.0%
!! CAAAGAGTGCTGGGCGTGAG+GGG - chr4.3:18537143-18537162 MS.gene023194:intron 60.0%
!! CCAAAGAGTGCTGGGCGTGA+GGG - chr4.3:18537142-18537161 MS.gene023194:intron 60.0%
CCCTCACGCCCAGCACTCTT+TGG + chr4.3:18537145-18537164 None:intergenic 65.0%
CGCCCAGCACTCTTTGGGCT+TGG + chr4.3:18537139-18537158 None:intergenic 65.0%
GAGATCGCCGGAGTCATCGC+CGG + chr4.3:18534527-18534546 None:intergenic 65.0%
GCAAGCGGCGCATGTCATGC+CGG + chr4.3:18534629-18534648 None:intergenic 65.0%
GCCGCTCTCATGTCCGTCGA+CGG - chr4.3:18534664-18534683 MS.gene023194:CDS 65.0%
GGCTAGCAGTGAACACCCGC+TGG - chr4.3:18538704-18538723 MS.gene023194:CDS 65.0%
TGCCGTACCAGTTGCTGCCG+GGG - chr4.3:18540076-18540095 MS.gene023194:CDS 65.0%
! GGGCGTGAGGGGGGTGTATT+GGG - chr4.3:18537154-18537173 MS.gene023194:intron 65.0%
! TGGGCGTGAGGGGGGTGTAT+TGG - chr4.3:18537153-18537172 MS.gene023194:intron 65.0%
!! AAGAGTGCTGGGCGTGAGGG+GGG - chr4.3:18537145-18537164 MS.gene023194:intron 65.0%
!! CCCAAAGAGTGCTGGGCGTG+AGG - chr4.3:18537141-18537160 MS.gene023194:intron 65.0%
!! ACCGGCGCCGGCGATGACTC+CGG - chr4.3:18534517-18534536 MS.gene023194:CDS 75.0%
! GCCGGAGTCATCGCCGGCGC+CGG + chr4.3:18534521-18534540 None:intergenic 80.0%
!! GGAGTCATCGCCGGCGCCGG+TGG + chr4.3:18534518-18534537 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 18534490 18540250 18534490 ID=MS.gene023194
chr4.3 mRNA 18534490 18540250 18534490 ID=MS.gene023194.t1;Parent=MS.gene023194
chr4.3 exon 18539984 18540250 18539984 ID=MS.gene023194.t1.exon1;Parent=MS.gene023194.t1
chr4.3 CDS 18539984 18540250 18539984 ID=cds.MS.gene023194.t1;Parent=MS.gene023194.t1
chr4.3 exon 18539262 18539882 18539262 ID=MS.gene023194.t1.exon2;Parent=MS.gene023194.t1
chr4.3 CDS 18539262 18539882 18539262 ID=cds.MS.gene023194.t1;Parent=MS.gene023194.t1
chr4.3 exon 18538375 18538804 18538375 ID=MS.gene023194.t1.exon3;Parent=MS.gene023194.t1
chr4.3 CDS 18538375 18538804 18538375 ID=cds.MS.gene023194.t1;Parent=MS.gene023194.t1
chr4.3 exon 18537872 18538197 18537872 ID=MS.gene023194.t1.exon4;Parent=MS.gene023194.t1
chr4.3 CDS 18537872 18538197 18537872 ID=cds.MS.gene023194.t1;Parent=MS.gene023194.t1
chr4.3 exon 18536751 18536809 18536751 ID=MS.gene023194.t1.exon5;Parent=MS.gene023194.t1
chr4.3 CDS 18536751 18536809 18536751 ID=cds.MS.gene023194.t1;Parent=MS.gene023194.t1
chr4.3 exon 18536302 18536644 18536302 ID=MS.gene023194.t1.exon6;Parent=MS.gene023194.t1
chr4.3 CDS 18536302 18536644 18536302 ID=cds.MS.gene023194.t1;Parent=MS.gene023194.t1
chr4.3 exon 18535838 18536035 18535838 ID=MS.gene023194.t1.exon7;Parent=MS.gene023194.t1
chr4.3 CDS 18535838 18536035 18535838 ID=cds.MS.gene023194.t1;Parent=MS.gene023194.t1
chr4.3 exon 18535410 18535667 18535410 ID=MS.gene023194.t1.exon8;Parent=MS.gene023194.t1
chr4.3 CDS 18535410 18535667 18535410 ID=cds.MS.gene023194.t1;Parent=MS.gene023194.t1
chr4.3 exon 18534490 18534966 18534490 ID=MS.gene023194.t1.exon9;Parent=MS.gene023194.t1
chr4.3 CDS 18534490 18534966 18534490 ID=cds.MS.gene023194.t1;Parent=MS.gene023194.t1
Gene Sequence

>MS.gene023194

ATGGCGCCGAGTATTCAACTAACTTCCACCGGCGCCGGCGATGACTCCGGCGATCTCGAAGATGTTCGCCTACTAGATTCCTACGATAAAAACGACGTCAACGACGACGGAATTAACCGGATTCAGGTCAGAATCACCGGCATGACATGCGCCGCTTGCTCTAACTCCGTTGAAGCCGCTCTCATGTCCGTCGACGGTGTAATTCAAGCCTCCGTTGCTTTACTTCAAAACAAAGCCGACGTCGTTTTCAATAGAAACCTCGTCAAGGTTTAACGCTAATTTTCACTTTTTTGTTTTTATTTTTTGAAATTGTGAAAGTGTTTGTTTAGTTACTGATTTTGGAAATTGTTGAATTATTTAAACCCTAGGATGAAGATATTAAGAATGCAATTGAAGATGCAGGTTTTGAAGCTGAGATCTTACATGAACCGGTTTCAACCGGACCTAAACCGGTTGGAGATAGTACGGTGGTTGGACAGTTCACGATCGGCGGTATGACATGTGCGGCGTGTGTGAATTCCGTTGAAGGAATTTTAAATGACATCACCGGAGTAAAAAAAGCGGTGGTGGCTTTAGCTACTTCATTAGGTGAAGTTGAGTATGATCCAAACGTGATAAGCAAAGAAGATATTGTTATTGCAATTGAAGATGCAGGTTTTGAAGCTTCTTTTGTTCAGAGTACTAGTCAAGATGAGATTGTTTTAGGGGTTGTAGGTGTTTGTTCTTTGGTGGATGCAAGGGTTTTGGAAAGTATGCTTAGTGGTATGAAAGGGGTGAGGCAGTTTCGGTTTGATCCTTTGTTGAGTGAGCTTAATGTTGTTTTTGATCCTCAAGTTCTTAGTTCTAGATCGTTGGTTGATGAGATTCGCGTAGTTAGTAATGACAAATATACTTTGCATGTTAGAAGCCCTTATGCGAGAATGGCTTCTAAAGATGGTTCAGAGAGTTCGTCTATGTTTCGGCTTTTTATTACCAGCTTGCTTCTTAGTGTGAGTATCCCTTTAATCTATAGCCATATTTGTTCTTGTTATTTTGGTTTCATTGTGCTTTATTTGTTTGATCACATTATTTTGCTTCTTATTGTAGATGTAGAGAGATAGTGAGTAGAGTTAAGAAATCATGTAGTTAGTAACTGCTTTAAACTCAAACCTTAGGGTGTTAGTGTAGAATGAGCCATCCTTTCTGATTCTGCTGATGTAAGACCTCCACAGAATTTTATGCTCCATAAGAGTTGCATTAGTTCATACTCCATACAGAAATTTCATCTAACGGAAGTAGTACCGCGTCATCGTTTTTTTTATAGAAACATGTAACTGAAGCTAAACAAGACTCTTCATTTTTAGAATTTGAGTGCATGTCTTATGTTATTGTCCCTTATTTTGTTTAGTTTCTTGTTTATTCTTTCCATGCTTTTGCATTGATTTGTGTTTGTTGCATTTGTCTCAGATTCCCCTCTTCTTCATGGGGGTAATTTGTCCTCATATCCCATTCATATACTCGTTATTACTTTGGAGATGTGGGCCTTTCCTCATGGATGATTGGTTGAAGTGGGCATTGGTGAGTGTCATTCAATTTGGGATTGGAAAGCGCTTCTACATAGCAGCTTTCAGAGCTCTTAGAAATGGTTCAACAAACATGGATGTCCTTGTTGCTTTGGGAACTACAGCTTCATATGTTTATTCTGTTTGTGCTCTTCTGTATGGCGCTCTTACTGGATTTTGGTCTACAACATACTTTGAAACAAGTGCTATGCTTATAACATTTGTATTGTTGGGAAAGTATTTGGAATGTCTTGCCAAGGGGAAGACATCTGATGCCATTAAGAAGCTAGTAGAACTCACTCCTGCAACAGCTTTATTGGTTGTTAAAGACAAAGGTGCTTGTCACTTTGATTTTATGTGCTTTGTTTTCTTAAGAAAATGGAGGGGAAACAGCTTATGTCCTGATTGTCTTATATTTAGGTTGAAATTAGTGATGGTTATTTAATTTATCATCTTGATTTCATCATAACATCAAATTATAACTTGCCAATATTTTTTCTTTTCTTTTCTAGATGGCAGACCTGTGGAAGAAAGAGAAATAGATTCCTTGCTTATTCAACCTAGTGACACATTAAAAGTTCTGCCTGGTACAAAGATTCCCGCTGATGGTATTGTTACCTGGGGCTCAAGTTATGTAAATGAGAGTATGGTGACTGGCGAGTCTATACCTGTTTCGAAGGAGATCAATGCATCTGTCATTGGAGGTACCATCAATTTGCATGGTGTCCTTCACATTAAAGCTACCAAAGTAGGATCCGATACAGTCTTGAGTCAGATAATTAATTTGGTCGAGACGGCCCAGATGTCCAAAGCTCCCATTCAAAAGTTTGCTGATTATGTAAGTATTGTGGCCGTGCTCTTGGATGGTTTTTATGTTCTGTTATTGTTAAATGATAGTGTAAGCATTTTTTGTGCCCTGCCTACATTGATAGTATTGGGAAAAACCCAAGTCCCACATCGGATAGATAAGACTCTTGAGAAGAGTATAGAAAGAGGAGGCAATGCTCACCTTACAAGCCGGTTTTGTAAGGATGAGTTAGGCCCCAAATTTTAACATGGTATCAGAGCTTGTCGAATTCAAGGGCCGCCTAAACCTATTCACGCACCAAGCCCAAAGAGTGCTGGGCGTGAGGGGGGTGTATTGGGAAAAACCCAAGTCCCACATCGGATAGATAAGGCTCTTGAGAGAGTATATAAAGAGGAGGCAATCCTCACCTTACAAGCCGGTTTTTTAAGGATGAGTTAGGCCCCAAATTTCAATAGATAGTGTAAGCATTTTTTGTGCACTGCCTACATTGCATAATATAGCCAATCCAAAGCTTGGAGAAAGAGGAGGGTTGTGATTAAGAAGTCTGCACCTAATATAAAACTCTGTTGAATCCCTGTGACATGGACTAGCAATGTGATAGTGTTCCCCGCCTAGTGGGAAATACTTCCATTTTTAGTTATTGCTGGTGTACCATGTATGCATTTTTACTTAGTTTGGATTCCATTCTTTGTGGTAAAGAAAGTTTTAGCTTGTGAATCAGTTTTGAAACTAGTGAAATGTTTTCTTGTAACTAAAAGACACAATGAGTTGCAAAGAGTCGGCATTTAGTTTTCCTGGGCTGCTGTTCTGGAAAATGAAAATCTGAGTAGTCCCGTAGAGTCAGAACAATATTTTGATGCCTTACCCCTGATCGTTGGAGCTCCTTACATAGAATTATTCATAAATTTTAATTGTTATTGATTCCAATTATTTCAGGTTTAGGCTTCAGCCATAATTCAAACTCACGTTTATTTGCTTGCACATAATATTCTAATAGTAGTCAGTATATTAACTTTATAAGCTTGCTAGTTGATTGCCACAAATGACTTAAGATACATTAACTAACTCAGGTACCATTCTTTTGGCTTGCAGGTAGCAAGCATATTTGTTCCTACAATTGTAGCTCTGTCATTATTGACACTATTGTGTTGGTAAGGTTTTTTTGACTAGTTTTTGCATATTGATAAAATTTGATTTCTAATGCGTGATTGAAATGCTTATCCTTACTTCTGTGTACATATTTTGTTTAAATTTTAGGTATACTGCTGGGGCTCTTGGAGCATACCCAGATGAATGGCTGCCGAAAAATGGAAACCACTTTGTTTTTGCCCTTATGTTTTCTATATCTGTTGTGGTGATTGCATGCCCATGTGCACTTGGTTTGGCGACACCAACTGCTGTCATGGTGGCAACAGGTGTTGGGGCTAACAATGGTGTGTTAATTAAAGGAGGAGAATCCTTAGAAAGAGCTCAGATGGTGAAGTACGTTATATTTGATAAGACAGGAACTCTAACTCAGGGTAAAGCCACTGTCTCTGTTGCCAAGGTGTTTGCAGGAATGGACCGTGGAGAATTTCTTAAACTGGTGGCTTCTGCTGAGGTAACTCCCAATGATGGTTACTCTCTGCTTCTCATTGTTTGCCTTTTGTATTGTCGCATACGCACAGTTTGAATCTAAATCCAGCTATAAAAGACATAAAACAATATTTTTCTAAATTTCCTTCCACCTTTTTGACAATGAGCTCAACTTTCCTAATAATGTTTTGGCATTTTATTTTATTTTTACCTTGCATTTCTATGATGCCTATTAGAGGAATCAACAGTATTTTTGTCAATTATTTTTTAATATATTTTATTTAAATTCAGGCTAGCAGTGAACACCCGCTGGCAAAAGCGATATTACAATATGCACGCCATTTTCACTTCTTTGATGAGTCCTCTCTTACCAATGGATCCCAAAATGATGCCAATGAATTAAAATCAGGGTGGCTTTATGATGCCTCAGACTTCTCTGCTATTCCAGGAAGGGGTGTGCAGTGCATTATAGACGGACAGCGTGTTTTGGTAAAAAAAATTTGGCTATTCTTGTATGATTGTTATTATCTTTAATGAAGGAATATGTTTTGTGGAGAGGGACACATGTCTCATTAGAGGAAGACTTTTCTTAAGAGTTGATAAAGGTGTTTTTTATTTGTCCAAACGATTGCTTATTTGAGGAAGTATGTTCTGATCAGGTTGGTAACAGGAAGCTGCTGGTGGAAAGTGGCATAAGTATTTCTACTGAAGTGGAAAACTTTGTTGTAGAGCTTGAAGAAAGTGCCAAGACTGGGATCCTTGTAGCGTGCAATGGAGTATTGATTGGAGTCTTAGGGGTTGCAGACTCACTTAAGCGAGAAGCTTCTGTTGTTATAGAGGGCCTCCAGAAAATGGGAATCACGCCTGTAATGGTTACAGGAGATAACTGGAGAACTGCTCGAGCTGTTGCCAAGGAGGTTTGTATATATTTCTATAATATTTTCTTTTTGGTTGGAAGTAGCTCGTGATAATTTTGAGTGCAGTTTCAAGGCTCTTTTACTAGTACCTAGAAAACCAACATCTTTTGCATGGAACATGGTATTGTTATAGTGTGTAATATGAAAAACAAAATTGAGCCGTGGATAGGGATAGTTTTATACTATGAATGAAAGAAAAGTATGATTAAAACCATAACTGGTCTCGTTTTCAAGCTGCCTGTTGATTTTCTTGTGCATAAAAGGCAATAGCAATGTTTGAAGTCAATGCTAAGATTTTAAATTTATTACTACAAATATTTTAATCTTCTCTCTGTTATAAATCATATTGAATATCTGTGAATTCTTCATGACAGTTATAACAAATTTTGGGCAGATATTGATGTTATGGTCAAACTTGGCTAAGAAAATGTGTTTTTTGACAGGTTGGCATTCAAGATGTTAGGGCAGAGGTTATGCCTGCAGGAAAGGCTGATGTGGTTCGTTCATTCCAAAAAGATGGTAGCATAGTTGCAATGGTGGGTGACGGTATAAATGATTCTCCTGCATTAGCTGCTGCAGATGTTGGTATGGCAATTGGAGCTGGGACAGATATTGCAATAGAAGCTGCTAATTATGTGTTGATGAGAGATAATTTGGAAGATGTAATCACAGCTATTGATCTTTCTAAGAAGACATTTTCTCGTATTCGATTGAATTATGTATTTGCCATGGCCTACAATATTATTGCCGTACCAGTTGCTGCCGGGGTTTTATTTCCTTCACTGGGAATCAAGCTTCCACCATGGGTTGCTGGTGCATGCATGGCTCTCTCATCTGTTAGTGTTGTATGTTCTTCTTTGCTTCTTAGAAGATATAGAAAACCAAGACTTACTACAATACTTGAAATAATTGTAAATTAA
Protein sequence

>MS.gene023194.t1

MAPSIQLTSTGAGDDSGDLEDVRLLDSYDKNDVNDDGINRIQVRITGMTCAACSNSVEAALMSVDGVIQASVALLQNKADVVFNRNLVKDEDIKNAIEDAGFEAEILHEPVSTGPKPVGDSTVVGQFTIGGMTCAACVNSVEGILNDITGVKKAVVALATSLGEVEYDPNVISKEDIVIAIEDAGFEASFVQSTSQDEIVLGVVGVCSLVDARVLESMLSGMKGVRQFRFDPLLSELNVVFDPQVLSSRSLVDEIRVVSNDKYTLHVRSPYARMASKDGSESSSMFRLFITSLLLSIPLFFMGVICPHIPFIYSLLLWRCGPFLMDDWLKWALVSVIQFGIGKRFYIAAFRALRNGSTNMDVLVALGTTASYVYSVCALLYGALTGFWSTTYFETSAMLITFVLLGKYLECLAKGKTSDAIKKLVELTPATALLVVKDKDGRPVEEREIDSLLIQPSDTLKVLPGTKIPADGIVTWGSSYVNESMVTGESIPVSKEINASVIGGTINLHGVLHIKATKVGSDTVLSQIINLVETAQMSKAPIQKFADYVASIFVPTIVALSLLTLLCWYTAGALGAYPDEWLPKNGNHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGESLERAQMVKYVIFDKTGTLTQGKATVSVAKVFAGMDRGEFLKLVASAEASSEHPLAKAILQYARHFHFFDESSLTNGSQNDANELKSGWLYDASDFSAIPGRGVQCIIDGQRVLVGNRKLLVESGISISTEVENFVVELEESAKTGILVACNGVLIGVLGVADSLKREASVVIEGLQKMGITPVMVTGDNWRTARAVAKEVGIQDVRAEVMPAGKADVVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIAIEAANYVLMRDNLEDVITAIDLSKKTFSRIRLNYVFAMAYNIIAVPVAAGVLFPSLGIKLPPWVAGACMALSSVSVVCSSLLLRRYRKPRLTTILEIIVN