Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene014966.t1 | XP_003603218.1 | 96.3 | 892 | 31 | 1 | 1 | 890 | 1 | 892 | 0.00E+00 | 1616.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene014966.t1 | B9DFX7 | 69.9 | 895 | 252 | 5 | 1 | 890 | 1 | 883 | 0.0e+00 | 1164.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene014966.t1 | G7J8G2 | 96.3 | 892 | 31 | 1 | 1 | 890 | 1 | 892 | 0.0e+00 | 1616.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene057573 | MS.gene014966 | PPI |
MS.gene014966 | MS.gene49524 | PPI |
MS.gene014966 | MS.gene36515 | PPI |
MS.gene014966 | MS.gene000697 | PPI |
MS.gene014966 | MS.gene019298 | PPI |
MS.gene014966 | MS.gene06927 | PPI |
MS.gene014966 | MS.gene49523 | PPI |
MS.gene014966 | MS.gene45363 | PPI |
MS.gene014966 | MS.gene06708 | PPI |
MS.gene014966 | MS.gene060325 | PPI |
MS.gene014966 | MS.gene015565 | PPI |
MS.gene014966 | MS.gene90176 | PPI |
MS.gene014966 | MS.gene013592 | PPI |
MS.gene014966 | MS.gene97779 | PPI |
MS.gene014966 | MS.gene021768 | PPI |
MS.gene014966 | MS.gene57466 | PPI |
MS.gene072795 | MS.gene014966 | PPI |
MS.gene014966 | MS.gene023194 | PPI |
MS.gene021767 | MS.gene014966 | PPI |
MS.gene014966 | MS.gene35184 | PPI |
MS.gene014966 | MS.gene45361 | PPI |
MS.gene014966 | MS.gene000345 | PPI |
MS.gene014966 | MS.gene057572 | PPI |
MS.gene014966 | MS.gene58690 | PPI |
MS.gene014966 | MS.gene54357 | PPI |
MS.gene014966 | MS.gene028274 | PPI |
MS.gene073463 | MS.gene014966 | PPI |
MS.gene014966 | MS.gene90280 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene014966.t1 | MTR_3g105190 | 96.300 | 892 | 31 | 1 | 1 | 890 | 1 | 892 | 0.0 | 1730 |
MS.gene014966.t1 | MTR_3g105190 | 95.964 | 768 | 29 | 1 | 1 | 766 | 1 | 768 | 0.0 | 1490 |
MS.gene014966.t1 | MTR_4g094232 | 43.012 | 830 | 406 | 16 | 76 | 882 | 126 | 911 | 0.0 | 612 |
MS.gene014966.t1 | MTR_4g094695 | 36.338 | 710 | 388 | 17 | 208 | 883 | 302 | 981 | 1.15e-118 | 385 |
MS.gene014966.t1 | MTR_2g035840 | 35.000 | 700 | 394 | 15 | 214 | 883 | 312 | 980 | 1.94e-112 | 368 |
MS.gene014966.t1 | MTR_8g079250 | 35.508 | 659 | 382 | 14 | 239 | 884 | 353 | 981 | 3.43e-111 | 365 |
MS.gene014966.t1 | MTR_5g010420 | 35.194 | 645 | 378 | 11 | 249 | 883 | 357 | 971 | 5.25e-110 | 362 |
MS.gene014966.t1 | MTR_8g012390 | 36.947 | 655 | 356 | 14 | 249 | 883 | 334 | 951 | 1.65e-107 | 354 |
MS.gene014966.t1 | MTR_8g012390 | 34.405 | 529 | 292 | 13 | 249 | 757 | 334 | 827 | 2.46e-74 | 261 |
MS.gene014966.t1 | MTR_8g079250 | 32.707 | 532 | 317 | 13 | 239 | 757 | 353 | 856 | 6.53e-70 | 249 |
MS.gene014966.t1 | MTR_4g127580 | 31.579 | 532 | 316 | 11 | 352 | 877 | 208 | 697 | 2.63e-65 | 238 |
MS.gene014966.t1 | MTR_2g036380 | 32.934 | 501 | 285 | 15 | 353 | 842 | 21 | 481 | 1.89e-64 | 229 |
MS.gene014966.t1 | MTR_2g036380 | 32.934 | 501 | 285 | 15 | 353 | 842 | 52 | 512 | 4.08e-64 | 229 |
MS.gene014966.t1 | MTR_2g036380 | 32.934 | 501 | 285 | 15 | 353 | 842 | 114 | 574 | 4.93e-64 | 230 |
MS.gene014966.t1 | MTR_2g036380 | 32.934 | 501 | 285 | 15 | 353 | 842 | 204 | 664 | 2.03e-63 | 229 |
MS.gene014966.t1 | MTR_8g079250 | 39.222 | 334 | 185 | 7 | 239 | 567 | 353 | 673 | 5.83e-58 | 212 |
MS.gene014966.t1 | MTR_4g094985 | 27.068 | 665 | 414 | 14 | 195 | 833 | 121 | 740 | 8.22e-46 | 177 |
MS.gene014966.t1 | MTR_2g449840 | 22.822 | 574 | 350 | 17 | 361 | 873 | 154 | 695 | 7.64e-21 | 99.0 |
MS.gene014966.t1 | MTR_6g011310 | 24.000 | 550 | 326 | 19 | 361 | 852 | 155 | 670 | 2.08e-20 | 97.8 |
MS.gene014966.t1 | MTR_4g127710 | 23.958 | 576 | 341 | 20 | 361 | 873 | 156 | 697 | 2.33e-19 | 94.4 |
MS.gene014966.t1 | MTR_4g127710 | 23.958 | 576 | 341 | 20 | 361 | 873 | 156 | 697 | 2.44e-19 | 94.4 |
MS.gene014966.t1 | MTR_2g036650 | 23.427 | 572 | 350 | 18 | 361 | 873 | 158 | 700 | 2.67e-19 | 94.0 |
MS.gene014966.t1 | MTR_3g108800 | 23.580 | 581 | 337 | 18 | 361 | 873 | 152 | 693 | 3.04e-18 | 90.5 |
MS.gene014966.t1 | MTR_3g108800 | 23.580 | 581 | 337 | 18 | 361 | 873 | 153 | 694 | 4.75e-18 | 90.1 |
MS.gene014966.t1 | MTR_2g104860 | 22.183 | 568 | 361 | 15 | 361 | 873 | 151 | 692 | 1.21e-17 | 88.6 |
MS.gene014966.t1 | MTR_4g107500 | 23.827 | 554 | 327 | 19 | 361 | 852 | 157 | 677 | 1.40e-17 | 88.6 |
MS.gene014966.t1 | MTR_8g063880 | 22.279 | 588 | 336 | 16 | 361 | 873 | 153 | 694 | 3.54e-17 | 87.0 |
MS.gene014966.t1 | MTR_8g446010 | 28.311 | 219 | 150 | 4 | 357 | 570 | 206 | 422 | 1.06e-12 | 72.8 |
MS.gene014966.t1 | MTR_8g045070 | 28.311 | 219 | 150 | 4 | 357 | 570 | 206 | 422 | 1.16e-12 | 72.4 |
MS.gene014966.t1 | MTR_8g090125 | 30.396 | 227 | 135 | 8 | 357 | 570 | 206 | 422 | 2.24e-11 | 68.6 |
MS.gene014966.t1 | MTR_8g027160 | 23.881 | 201 | 110 | 5 | 687 | 849 | 619 | 814 | 4.18e-11 | 67.4 |
MS.gene014966.t1 | MTR_8g027160 | 23.881 | 201 | 110 | 5 | 687 | 849 | 619 | 814 | 5.60e-11 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene014966.t1 | AT5G21930 | 73.990 | 842 | 216 | 3 | 51 | 890 | 43 | 883 | 0.0 | 1266 |
MS.gene014966.t1 | AT5G21930 | 73.990 | 842 | 216 | 3 | 51 | 890 | 43 | 883 | 0.0 | 1266 |
MS.gene014966.t1 | AT5G21930 | 71.734 | 842 | 212 | 4 | 51 | 890 | 43 | 860 | 0.0 | 1213 |
MS.gene014966.t1 | AT5G21930 | 73.228 | 762 | 202 | 2 | 51 | 810 | 43 | 804 | 0.0 | 1132 |
MS.gene014966.t1 | AT4G33520 | 42.963 | 810 | 403 | 17 | 85 | 878 | 150 | 916 | 0.0 | 615 |
MS.gene014966.t1 | AT4G33520 | 42.963 | 810 | 403 | 17 | 85 | 878 | 150 | 916 | 0.0 | 615 |
MS.gene014966.t1 | AT1G63440 | 36.842 | 646 | 367 | 12 | 249 | 883 | 364 | 979 | 2.01e-115 | 376 |
MS.gene014966.t1 | AT5G44790 | 35.174 | 688 | 392 | 14 | 220 | 883 | 333 | 990 | 1.50e-106 | 352 |
MS.gene014966.t1 | AT4G30110 | 31.034 | 609 | 349 | 14 | 288 | 887 | 157 | 703 | 1.22e-69 | 249 |
MS.gene014966.t1 | AT4G30110 | 31.034 | 609 | 349 | 14 | 288 | 887 | 157 | 703 | 1.22e-69 | 249 |
MS.gene014966.t1 | AT2G19110 | 32.717 | 541 | 299 | 14 | 364 | 885 | 226 | 720 | 5.15e-61 | 226 |
MS.gene014966.t1 | AT2G19110 | 32.717 | 541 | 299 | 14 | 364 | 885 | 226 | 720 | 5.15e-61 | 226 |
MS.gene014966.t1 | AT2G19110 | 32.717 | 541 | 299 | 14 | 364 | 885 | 226 | 720 | 5.15e-61 | 226 |
MS.gene014966.t1 | AT4G37270 | 27.778 | 666 | 405 | 16 | 195 | 832 | 128 | 745 | 1.01e-47 | 183 |
MS.gene014966.t1 | AT4G30120 | 30.465 | 430 | 240 | 13 | 288 | 709 | 4 | 382 | 4.97e-42 | 158 |
MS.gene014966.t1 | AT4G30120 | 30.465 | 430 | 240 | 13 | 288 | 709 | 163 | 541 | 8.74e-41 | 159 |
MS.gene014966.t1 | AT1G80660 | 23.236 | 581 | 339 | 17 | 361 | 873 | 156 | 697 | 2.90e-22 | 103 |
MS.gene014966.t1 | AT1G80660 | 23.236 | 581 | 339 | 17 | 361 | 873 | 156 | 697 | 3.06e-22 | 103 |
MS.gene014966.t1 | AT1G80660 | 23.236 | 581 | 339 | 17 | 361 | 873 | 27 | 568 | 4.14e-22 | 102 |
MS.gene014966.t1 | AT1G80660 | 23.236 | 581 | 339 | 17 | 361 | 873 | 156 | 697 | 4.30e-22 | 103 |
MS.gene014966.t1 | AT1G17260 | 22.867 | 586 | 353 | 19 | 361 | 884 | 159 | 707 | 2.16e-21 | 100 |
MS.gene014966.t1 | AT5G57350 | 24.788 | 589 | 339 | 19 | 361 | 884 | 152 | 701 | 3.41e-21 | 100 |
MS.gene014966.t1 | AT5G57350 | 24.788 | 589 | 339 | 19 | 361 | 884 | 152 | 701 | 3.41e-21 | 100 |
MS.gene014966.t1 | AT5G57350 | 24.788 | 589 | 339 | 19 | 361 | 884 | 152 | 701 | 3.41e-21 | 100 |
MS.gene014966.t1 | AT2G18960 | 23.649 | 592 | 342 | 17 | 361 | 884 | 151 | 700 | 4.77e-21 | 99.8 |
MS.gene014966.t1 | AT2G18960 | 23.649 | 592 | 342 | 17 | 361 | 884 | 87 | 636 | 6.68e-21 | 99.4 |
MS.gene014966.t1 | AT2G18960 | 23.649 | 592 | 342 | 17 | 361 | 884 | 87 | 636 | 6.68e-21 | 99.4 |
MS.gene014966.t1 | AT4G30190 | 23.689 | 591 | 343 | 18 | 361 | 884 | 151 | 700 | 3.28e-20 | 97.1 |
MS.gene014966.t1 | AT3G47950 | 23.477 | 558 | 324 | 18 | 361 | 852 | 159 | 679 | 4.68e-19 | 93.2 |
MS.gene014966.t1 | AT3G47950 | 23.477 | 558 | 324 | 18 | 361 | 852 | 159 | 679 | 4.68e-19 | 93.2 |
MS.gene014966.t1 | AT3G42640 | 22.125 | 574 | 354 | 13 | 361 | 873 | 154 | 695 | 8.89e-19 | 92.4 |
MS.gene014966.t1 | AT2G07560 | 21.603 | 574 | 358 | 17 | 361 | 874 | 154 | 695 | 9.13e-18 | 89.4 |
MS.gene014966.t1 | AT4G11730 | 24.950 | 505 | 295 | 15 | 361 | 853 | 152 | 584 | 1.09e-17 | 88.6 |
Find 222 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATTTCAGGATGGTCCTTTA+AGG | 0.160048 | 3.2:+86805072 | MS.gene014966:intron |
GCTATGACACCTTCACTTTC+AGG | 0.161793 | 3.2:+86811264 | MS.gene014966:CDS |
CAGCAGCAACATTTGCATTT+TGG | 0.168596 | 3.2:+86805851 | MS.gene014966:CDS |
GCCATTGGCTCTATTCATTA+TGG | 0.183910 | 3.2:+86808454 | MS.gene014966:CDS |
CTTCTTGGTTTCGTGCTTCT+AGG | 0.187114 | 3.2:+86803601 | MS.gene014966:CDS |
CTACTGCCCAAGATAAATTT+TGG | 0.191587 | 3.2:-86811182 | None:intergenic |
CCCACGAGAGAGTTCATATT+TGG | 0.230571 | 3.2:-86803162 | None:intergenic |
AATCATCACAGGAGGTTTAA+TGG | 0.233784 | 3.2:+86811473 | MS.gene014966:intron |
AATGGCTATGAGCTCCATTT+TGG | 0.256688 | 3.2:+86811491 | MS.gene014966:CDS |
TGCAGCATCCATCATACTTC+TGG | 0.259093 | 3.2:+86810656 | MS.gene014966:CDS |
TTTAGCTTTGGGTGCTCTAT+TGG | 0.259169 | 3.2:+86802691 | MS.gene014966:CDS |
AAAACTCTCTGTAGATGTTT+TGG | 0.270027 | 3.2:+86806794 | MS.gene014966:CDS |
CAGATAGTTGAACCAGGTTT+TGG | 0.273298 | 3.2:+86808595 | MS.gene014966:CDS |
GTTGCAGATTTACTCTTTGA+TGG | 0.284654 | 3.2:+86803114 | MS.gene014966:intron |
AGCATGCAGGTCATGCTTCT+TGG | 0.291940 | 3.2:+86803586 | MS.gene014966:intron |
TTAGCTTTGGGTGCTCTATT+GGG | 0.297611 | 3.2:+86802692 | MS.gene014966:CDS |
GTGTCATAGCAAAGTCAAAT+TGG | 0.302041 | 3.2:-86811251 | None:intergenic |
TTAATAATAGCCTTTGCTAT+TGG | 0.303962 | 3.2:-86808529 | None:intergenic |
CCGCGGTTGGGTCTTTAGAA+TGG | 0.307374 | 3.2:+86808647 | MS.gene014966:CDS |
ATGAACTCTCTCGTGGGATT+TGG | 0.310553 | 3.2:+86803168 | MS.gene014966:CDS |
TCTGAAAGGCTCACATCTAT+AGG | 0.316788 | 3.2:-86804537 | None:intergenic |
GAAGAAGATTCAATCCTTAA+AGG | 0.318105 | 3.2:-86805086 | None:intergenic |
GTTTCTTGTCCTTGTGCATT+GGG | 0.323766 | 3.2:+86807299 | MS.gene014966:CDS |
TTTCAGCAGGAACTATAAAC+TGG | 0.333469 | 3.2:+86804916 | MS.gene014966:CDS |
AGAAGAAATGATTCCGATTC+CGG | 0.333592 | 3.2:-86801838 | None:intergenic |
AAGAGGAGAGAATCGGGTTT+AGG | 0.335699 | 3.2:+86802096 | MS.gene014966:CDS |
ATTGAAACGGTCCTCTTATC+AGG | 0.343160 | 3.2:+86809657 | MS.gene014966:CDS |
GGAACCTTGGCAGAAATAGA+TGG | 0.346131 | 3.2:+86808616 | MS.gene014966:CDS |
AGAAGAAAAGGCTAGGATTC+AGG | 0.351124 | 3.2:+86803633 | MS.gene014966:CDS |
AAGCAGAACTGGAGAGTCTT+TGG | 0.354438 | 3.2:-86801878 | None:intergenic |
CTTTGGCTGCAGCTGATGTT+GGG | 0.359800 | 3.2:+86810592 | MS.gene014966:CDS |
AAAAGCAGAGGATCTCCTTC+TGG | 0.372741 | 3.2:-86806765 | None:intergenic |
AAGTTTACCAAAATTTATCT+TGG | 0.373570 | 3.2:+86811175 | MS.gene014966:CDS |
TGCATCATTCTTTGATGAAC+CGG | 0.377393 | 3.2:+86803364 | MS.gene014966:CDS |
GGTGCTGAAGGCGTTTGATA+TGG | 0.378754 | 3.2:-86801803 | None:intergenic |
TCTTTGGCTGCAGCTGATGT+TGG | 0.386009 | 3.2:+86810591 | MS.gene014966:CDS |
CTAAGCACACTGTCAGTAGA+TGG | 0.388281 | 3.2:-86804432 | None:intergenic |
CGCGGTTGGGTCTTTAGAAT+GGG | 0.389436 | 3.2:+86808648 | MS.gene014966:CDS |
GATAAATGATGCACCCTCTT+TGG | 0.396231 | 3.2:+86810575 | MS.gene014966:CDS |
TGTCATAGCAAAGTCAAATT+GGG | 0.397630 | 3.2:-86811250 | None:intergenic |
CGAGATTCGCTCACCGGAAT+CGG | 0.406053 | 3.2:+86801825 | MS.gene014966:CDS |
TGAGTTGCTAACCACCAAAA+TGG | 0.407117 | 3.2:-86811505 | None:intergenic |
ACTAACCATGCGTACAATCT+TGG | 0.408351 | 3.2:-86805132 | None:intergenic |
AAACCAGTTGTTTCTGCCAT+TGG | 0.414420 | 3.2:+86808439 | MS.gene014966:CDS |
CTGAAAGGCTCACATCTATA+GGG | 0.415640 | 3.2:-86804536 | None:intergenic |
TGTTTCTTGTCCTTGTGCAT+TGG | 0.418994 | 3.2:+86807298 | MS.gene014966:CDS |
CGTGAAGGAGAAGGCATCAT+TGG | 0.421548 | 3.2:+86808793 | MS.gene014966:CDS |
CAACAATTGCAGAGACAGTT+GGG | 0.421908 | 3.2:+86809700 | MS.gene014966:CDS |
GATGGGCGTTTGGCCGCGGT+TGG | 0.423588 | 3.2:+86808634 | MS.gene014966:CDS |
TGTGAAAGGTGGTTTAGCTT+TGG | 0.424829 | 3.2:+86802679 | MS.gene014966:CDS |
CCGGTGACGTCAAGCAGAAC+TGG | 0.424957 | 3.2:-86801889 | None:intergenic |
TTGCGGAGAATGTGAGGAAG+TGG | 0.426058 | 3.2:+86802121 | MS.gene014966:CDS |
CCGACGAAGAGGAGAGAATC+GGG | 0.428018 | 3.2:+86802090 | MS.gene014966:CDS |
ATTTCATCTCTAAAAGCTGC+TGG | 0.429040 | 3.2:+86809777 | MS.gene014966:CDS |
GAAACAAACTAACCTCTTCC+TGG | 0.431870 | 3.2:-86802716 | None:intergenic |
TTCACGCACAATGTCAGATA+TGG | 0.434210 | 3.2:-86808824 | None:intergenic |
GGACAGGGAAGGGTCATTGC+AGG | 0.435079 | 3.2:+86804822 | MS.gene014966:intron |
GCGTAGTTGAAACGGAAGTT+AGG | 0.438560 | 3.2:-86801679 | None:intergenic |
GGCAGAAATAGATGGGCGTT+TGG | 0.441848 | 3.2:+86808624 | MS.gene014966:CDS |
GTGAAAGGTGGTTTAGCTTT+GGG | 0.445483 | 3.2:+86802680 | MS.gene014966:CDS |
TCGATCGTCGGAGGAGAGAA+TGG | 0.447449 | 3.2:-86801947 | None:intergenic |
TAGTTCCTGCTGAAACTGTA+AGG | 0.450135 | 3.2:-86804908 | None:intergenic |
AAAGCAGAGGATCTCCTTCT+GGG | 0.451988 | 3.2:-86806764 | None:intergenic |
GACTCGGTGTTGGTGTTGCC+TGG | 0.452378 | 3.2:+86804504 | MS.gene014966:CDS |
ATGGGCGTTTGGCCGCGGTT+GGG | 0.453810 | 3.2:+86808635 | MS.gene014966:CDS |
GATGCATCCCATGCCAGCTC+GGG | 0.454419 | 3.2:-86803347 | None:intergenic |
GGAGAATATTGCGGCGGTGG+TGG | 0.460769 | 3.2:-86801768 | None:intergenic |
TACTTAACCCCGAGCTGGCA+TGG | 0.460970 | 3.2:+86803339 | MS.gene014966:CDS |
TATTGCAAGGCTCAAGAAGA+AGG | 0.463668 | 3.2:+86809632 | MS.gene014966:intron |
GAGAAATGAAGTGGTGGTTA+TGG | 0.467114 | 3.2:-86801714 | None:intergenic |
GCACCCGCCGCACATCATTC+CGG | 0.470165 | 3.2:-86801908 | None:intergenic |
GTCATTATGCTAAATACAAA+TGG | 0.470978 | 3.2:-86805823 | None:intergenic |
AGGCTTGCAGATTCAATAGC+AGG | 0.473144 | 3.2:+86805799 | MS.gene014966:CDS |
TCTGCCAAGGTTCCAAAACC+TGG | 0.473199 | 3.2:-86808607 | None:intergenic |
AGGACGTTCTCTAGAAGAAA+AGG | 0.474060 | 3.2:+86803621 | MS.gene014966:CDS |
GAGCCAATGGCAGAAACAAC+TGG | 0.474215 | 3.2:-86808442 | None:intergenic |
CGGTCCTCTTATCAGGAGAC+AGG | 0.475376 | 3.2:+86809664 | MS.gene014966:CDS |
TCCTTCTCTAAGGTAGGTGA+TGG | 0.476768 | 3.2:+86810552 | MS.gene014966:intron |
CGGTCTCCGACCTCAGGAAA+GGG | 0.477811 | 3.2:+86811546 | MS.gene014966:CDS |
AGGATTGAATCTTCTTCGAC+TGG | 0.478815 | 3.2:+86805092 | MS.gene014966:CDS |
TTGCCATCGTTGCCTGTGCT+AGG | 0.479200 | 3.2:-86811152 | None:intergenic |
AGTTTACCAAAATTTATCTT+GGG | 0.479601 | 3.2:+86811176 | MS.gene014966:CDS |
GTGGACGAATCCATGCTTAC+AGG | 0.481024 | 3.2:+86804855 | MS.gene014966:CDS |
CCAGTTCTGCTTGACGTCAC+CGG | 0.481450 | 3.2:+86801889 | MS.gene014966:CDS |
ATTGCCGTTCCCATTGCTGC+TGG | 0.485014 | 3.2:+86811216 | MS.gene014966:CDS |
ATCCTAGTTGGCACCTCACT+TGG | 0.485823 | 3.2:+86807341 | MS.gene014966:CDS |
CTTCCCTGTCTCCTGATAAG+AGG | 0.489164 | 3.2:-86809668 | None:intergenic |
GCAGCATCCATCATACTTCT+GGG | 0.489187 | 3.2:+86810657 | MS.gene014966:CDS |
CTTCATCGGTCTCCGACCTC+AGG | 0.491021 | 3.2:+86811540 | MS.gene014966:CDS |
TTTGTTGCCCAGAAGTATGA+TGG | 0.492353 | 3.2:-86810664 | None:intergenic |
TCCGACGAAGAGGAGAGAAT+CGG | 0.492472 | 3.2:+86802089 | MS.gene014966:CDS |
GCAACAATTGCAGAGACAGT+TGG | 0.492633 | 3.2:+86809699 | MS.gene014966:CDS |
GCCGGAGAATATTGCGGCGG+TGG | 0.493704 | 3.2:-86801771 | None:intergenic |
TGTGAGGAAGTGGAAGGAGT+TGG | 0.497452 | 3.2:+86802131 | MS.gene014966:CDS |
AATCTTGGATATCATTGTGT+TGG | 0.500914 | 3.2:-86805117 | None:intergenic |
AGGGGATGTGCTAGAACGCT+TGG | 0.503436 | 3.2:+86807631 | MS.gene014966:CDS |
TCAAGATTCATCAAATCAGA+TGG | 0.503703 | 3.2:-86808700 | None:intergenic |
CTCGGAGATTGAGTGAATGC+GGG | 0.504854 | 3.2:+86802064 | MS.gene014966:CDS |
GATTGAATGCGTAGTTGAAA+CGG | 0.508861 | 3.2:-86801687 | None:intergenic |
AATAGATGGGCGTTTGGCCG+CGG | 0.509936 | 3.2:+86808630 | MS.gene014966:CDS |
TGATGCATCCCATGCCAGCT+CGG | 0.510256 | 3.2:-86803348 | None:intergenic |
CTTCATAATTCATATGTGAA+AGG | 0.511540 | 3.2:+86802665 | MS.gene014966:CDS |
TTCTAGTATTGAAACGCTCA+TGG | 0.512198 | 3.2:-86808672 | None:intergenic |
CGATTCCGGTGAGCGAATCT+CGG | 0.517690 | 3.2:-86801824 | None:intergenic |
TAAGCACACTGTCAGTAGAT+GGG | 0.518932 | 3.2:-86804431 | None:intergenic |
GCGATTGCGACAGCGTTTAG+TGG | 0.519834 | 3.2:-86801743 | None:intergenic |
TTGGTCCTTCCACTCACAAA+AGG | 0.520959 | 3.2:+86808571 | MS.gene014966:CDS |
CGATTGCGACAGCGTTTAGT+GGG | 0.521270 | 3.2:-86801742 | None:intergenic |
AATGATATTGCGGGCCCAGA+AGG | 0.524619 | 3.2:+86806750 | MS.gene014966:CDS |
AGTAACACACCAGCAGCAAT+GGG | 0.530062 | 3.2:-86811225 | None:intergenic |
ATAGGGATTCACATTGCTCA+TGG | 0.531063 | 3.2:+86802261 | MS.gene014966:CDS |
GAAGGCCTTACAGTTTCAGC+AGG | 0.532555 | 3.2:+86804903 | MS.gene014966:CDS |
AGCAAGTCCTTCCGCAACGC+TGG | 0.532664 | 3.2:-86802043 | None:intergenic |
TCTTCAGATTGCTGCGTCAG+TGG | 0.534092 | 3.2:+86808489 | MS.gene014966:CDS |
TAGGAGTTGCGGAGAATGTG+AGG | 0.535748 | 3.2:+86802115 | MS.gene014966:CDS |
GCTCTATTGGGACCAGGAAG+AGG | 0.536437 | 3.2:+86802704 | MS.gene014966:CDS |
TTATGAAGAAATTCCCAAAA+CGG | 0.536893 | 3.2:-86802650 | None:intergenic |
GAATCTGCAAGCCTTTGTAC+AGG | 0.537591 | 3.2:-86805790 | None:intergenic |
AAGTAACACACCAGCAGCAA+TGG | 0.538282 | 3.2:-86811226 | None:intergenic |
TCTGGGCAACAAAATTTCAC+AGG | 0.541788 | 3.2:+86810674 | MS.gene014966:CDS |
TAAATCTGAGTCATTAGAGT+TGG | 0.542920 | 3.2:+86808552 | MS.gene014966:CDS |
GACTGAGTCAACTCGATCGT+CGG | 0.543527 | 3.2:-86801959 | None:intergenic |
ACTTAACCCCGAGCTGGCAT+GGG | 0.545346 | 3.2:+86803340 | MS.gene014966:CDS |
CATAATTCATATGTGAAAGG+TGG | 0.545937 | 3.2:+86802668 | MS.gene014966:CDS |
CAGCACCGAGATTCGCTCAC+CGG | 0.547311 | 3.2:+86801819 | MS.gene014966:CDS |
GAAACGGAAGTTAGGTGGAG+AGG | 0.547552 | 3.2:-86801671 | None:intergenic |
ATTGCAAGGCTCAAGAAGAA+GGG | 0.548034 | 3.2:+86809633 | MS.gene014966:intron |
ATATCATTGAGCAAAACATC+AGG | 0.548267 | 3.2:-86806735 | None:intergenic |
GAACCTTGGCAGAAATAGAT+GGG | 0.550521 | 3.2:+86808617 | MS.gene014966:CDS |
TACCAAGTGAGGTGCCAACT+AGG | 0.550839 | 3.2:-86807343 | None:intergenic |
TCGGTCTCCGACCTCAGGAA+AGG | 0.556090 | 3.2:+86811545 | MS.gene014966:CDS |
TTGGGTGCTCTATTGGGACC+AGG | 0.557223 | 3.2:+86802698 | MS.gene014966:CDS |
ACGCCCATCTATTTCTGCCA+AGG | 0.557392 | 3.2:-86808620 | None:intergenic |
AAGTGATTCTCCTGTAAGCA+TGG | 0.558731 | 3.2:-86804865 | None:intergenic |
GATATCCAAGATTGTACGCA+TGG | 0.559082 | 3.2:+86805127 | MS.gene014966:CDS |
GATGTGCTAGAACGCTTGGC+CGG | 0.562371 | 3.2:+86807635 | MS.gene014966:CDS |
ACACCAACAGCAATCCTAGT+TGG | 0.570660 | 3.2:+86807329 | MS.gene014966:CDS |
AGATTTCTGCTGCGGAGACA+AGG | 0.570688 | 3.2:-86809748 | None:intergenic |
TCACCGGAATGATGTGCGGC+GGG | 0.574066 | 3.2:+86801905 | MS.gene014966:CDS |
CTTATCAGGAGACAGGGAAG+AGG | 0.575212 | 3.2:+86809671 | MS.gene014966:CDS |
TGAGCGAATCTCGGTGCTGA+AGG | 0.577726 | 3.2:-86801815 | None:intergenic |
AGCTGCTTTCATCATCAGCT+CGG | 0.579006 | 3.2:+86803197 | MS.gene014966:CDS |
TGGGAAGCAGAGAAATGAAG+TGG | 0.580017 | 3.2:-86801723 | None:intergenic |
ACCACCGCCGCAATATTCTC+CGG | 0.580402 | 3.2:+86801770 | MS.gene014966:CDS |
CCTACTCGAATATCATCAGT+TGG | 0.581292 | 3.2:-86804480 | None:intergenic |
AGAATCGGGTTTAGGAGTTG+CGG | 0.581674 | 3.2:+86802104 | MS.gene014966:CDS |
AGGGACTTCTTATCAGAGGA+GGG | 0.583108 | 3.2:+86807612 | MS.gene014966:CDS |
TAGCTCAGACGCAATTTGTG+TGG | 0.583550 | 3.2:+86804452 | MS.gene014966:CDS |
CTTGTCATTACATCATCAGA+AGG | 0.583624 | 3.2:+86804405 | MS.gene014966:CDS |
TCCATAATGAATAGAGCCAA+TGG | 0.585029 | 3.2:-86808455 | None:intergenic |
GCCAAATATGAACTCTCTCG+TGG | 0.585086 | 3.2:+86803161 | MS.gene014966:CDS |
ATCCTTTCTTAAAAGCAAGT+AGG | 0.585194 | 3.2:-86803137 | None:intergenic |
TCTATAGGGATAGTTTCTCC+AGG | 0.586494 | 3.2:-86804522 | None:intergenic |
AACATCAGCTGCAGCCAAAG+AGG | 0.588636 | 3.2:-86810589 | None:intergenic |
TTGCAAGGCTCAAGAAGAAG+GGG | 0.589036 | 3.2:+86809634 | MS.gene014966:intron |
CTCACTACTTAACCCCGAGC+TGG | 0.591206 | 3.2:+86803334 | MS.gene014966:CDS |
TACGTTGGACGTGAAGGAGA+AGG | 0.594724 | 3.2:+86808784 | MS.gene014966:CDS |
CCCGATTCTCTCCTCTTCGT+CGG | 0.595530 | 3.2:-86802090 | None:intergenic |
GGAGTTGGCGAAGAAGAAAG+AGG | 0.596159 | 3.2:+86802146 | MS.gene014966:CDS |
CAAGAAGAAGGGGATTGAAA+CGG | 0.597612 | 3.2:+86809644 | MS.gene014966:CDS |
GTTCTCTAGAAGAAAAGGCT+AGG | 0.598245 | 3.2:+86803626 | MS.gene014966:CDS |
AAGGGACTTCTTATCAGAGG+AGG | 0.598690 | 3.2:+86807611 | MS.gene014966:CDS |
CCAACTGATGATATTCGAGT+AGG | 0.598800 | 3.2:+86804480 | MS.gene014966:CDS |
CGCGTGAAGCACCTGTACAA+AGG | 0.598846 | 3.2:+86805779 | MS.gene014966:CDS |
CAAGATTCATCAAATCAGAT+GGG | 0.598878 | 3.2:-86808699 | None:intergenic |
TGAGTCAACTCGATCGTCGG+AGG | 0.599159 | 3.2:-86801956 | None:intergenic |
GGAGAATGTGAGGAAGTGGA+AGG | 0.599169 | 3.2:+86802125 | MS.gene014966:CDS |
AGAGGAATCTACCAGCGTTG+CGG | 0.600192 | 3.2:+86802032 | MS.gene014966:CDS |
TTGATATGGAGAAGTGTGGC+CGG | 0.600569 | 3.2:-86801789 | None:intergenic |
TGCATCTCATCCAATAGCAA+AGG | 0.602358 | 3.2:+86808519 | MS.gene014966:CDS |
AACTAGGATTGCTGTTGGTG+TGG | 0.602361 | 3.2:-86807327 | None:intergenic |
TCGAAAACAGTTGTCTACGT+TGG | 0.602964 | 3.2:+86808769 | MS.gene014966:CDS |
CATAAATAAAGTACCAAGTG+AGG | 0.603524 | 3.2:-86807354 | None:intergenic |
GCTCGGAGATTGAGTGAATG+CGG | 0.604236 | 3.2:+86802063 | MS.gene014966:CDS |
GTTGTCTACGTTGGACGTGA+AGG | 0.605611 | 3.2:+86808778 | MS.gene014966:CDS |
GAATCTACCAGCGTTGCGGA+AGG | 0.608619 | 3.2:+86802036 | MS.gene014966:CDS |
CCTTCTCTAAGGTAGGTGAT+GGG | 0.610377 | 3.2:+86810553 | MS.gene014966:intron |
CCAAATATGAACTCTCTCGT+GGG | 0.610704 | 3.2:+86803162 | MS.gene014966:CDS |
AGTGAGCCCTTTCCTGAGGT+CGG | 0.612044 | 3.2:-86811552 | None:intergenic |
GGCTTGCAGATTCAATAGCA+GGG | 0.612988 | 3.2:+86805800 | MS.gene014966:CDS |
TAGTTGAAACGGAAGTTAGG+TGG | 0.614884 | 3.2:-86801676 | None:intergenic |
CATTGCAGGAAGAAGCGTTG+TGG | 0.615848 | 3.2:+86804836 | MS.gene014966:CDS |
ACATCAGCTGCAGCCAAAGA+GGG | 0.622600 | 3.2:-86810588 | None:intergenic |
GACGTCACCGGAATGATGTG+CGG | 0.627196 | 3.2:+86801901 | MS.gene014966:CDS |
TTCAGCAGGAACTATAAACT+GGG | 0.627325 | 3.2:+86804917 | MS.gene014966:CDS |
TGACGCATTAGACCTAGCAC+AGG | 0.630993 | 3.2:+86811140 | MS.gene014966:CDS |
TCGAGTAGGAGACTCGGTGT+TGG | 0.632051 | 3.2:+86804494 | MS.gene014966:CDS |
CTTTCTAAGCTTAACAGCGG+CGG | 0.633134 | 3.2:-86802004 | None:intergenic |
TATGATGGATGCTGCATCTG+AGG | 0.635759 | 3.2:-86810649 | None:intergenic |
ACTTTGGTCGCGTTGTGCTG+TGG | 0.635968 | 3.2:+86802210 | MS.gene014966:CDS |
TGCTGGACATCATGTTGCGA+TGG | 0.636090 | 3.2:+86809794 | MS.gene014966:CDS |
AATGCGGGTTTCCGACGAAG+AGG | 0.639758 | 3.2:+86802079 | MS.gene014966:CDS |
GTCATAGCAAAGTCAAATTG+GGG | 0.640077 | 3.2:-86811249 | None:intergenic |
GTGCCAACTAGGATTGCTGT+TGG | 0.641116 | 3.2:-86807332 | None:intergenic |
CTAGAGTGAGCCCTTTCCTG+AGG | 0.642871 | 3.2:-86811556 | None:intergenic |
CACACCAGCAGCAATGGGAA+CGG | 0.643109 | 3.2:-86811220 | None:intergenic |
GCGTTGCGGAAGGACTTGCT+CGG | 0.643585 | 3.2:+86802046 | MS.gene014966:CDS |
GTGGCAAGACCCAATGCACA+AGG | 0.645427 | 3.2:-86807308 | None:intergenic |
ATGCATCCCATGCCAGCTCG+GGG | 0.649016 | 3.2:-86803346 | None:intergenic |
GTCACCGGAATGATGTGCGG+CGG | 0.649191 | 3.2:+86801904 | MS.gene014966:CDS |
AGACCTAGCACAGGCAACGA+TGG | 0.652994 | 3.2:+86811149 | MS.gene014966:CDS |
AAGCACACTGTCAGTAGATG+GGG | 0.653316 | 3.2:-86804430 | None:intergenic |
TAAGCTTAGAAAGCTCGAAG+AGG | 0.653799 | 3.2:+86802014 | MS.gene014966:CDS |
ACTCGACGGATGATTCATCA+AGG | 0.656694 | 3.2:-86808728 | None:intergenic |
TTTGAAGATGATGTACTCGA+CGG | 0.660135 | 3.2:-86808742 | None:intergenic |
AAATTATATCGCTCTAGACA+AGG | 0.661694 | 3.2:+86807661 | MS.gene014966:CDS |
GGTTGCTCACCTGAAAGTGA+AGG | 0.663313 | 3.2:-86811273 | None:intergenic |
GGTCCTCTTATCAGGAGACA+GGG | 0.665982 | 3.2:+86809665 | MS.gene014966:CDS |
ATGCTGAATCTACTGTGATG+AGG | 0.671815 | 3.2:+86808848 | MS.gene014966:CDS |
GCGTTTGATATGGAGAAGTG+TGG | 0.673941 | 3.2:-86801793 | None:intergenic |
ATGAATGCAGATTTCTGCTG+CGG | 0.676535 | 3.2:-86809756 | None:intergenic |
GAAGCAGAGAAATGAAGTGG+TGG | 0.676765 | 3.2:-86801720 | None:intergenic |
GAGCTTTCTAAGCTTAACAG+CGG | 0.679290 | 3.2:-86802007 | None:intergenic |
TGATATTCGAGTAGGAGACT+CGG | 0.680731 | 3.2:+86804488 | MS.gene014966:CDS |
AAAGGACAGATAGTTGAACC+AGG | 0.681507 | 3.2:+86808589 | MS.gene014966:CDS |
GGGACTTCTTATCAGAGGAG+GGG | 0.682700 | 3.2:+86807613 | MS.gene014966:CDS |
TAGAGCGATATAATTTACAC+CGG | 0.688008 | 3.2:-86807654 | None:intergenic |
CAGACAGGAACCCTTACCAG+AGG | 0.689029 | 3.2:+86808415 | MS.gene014966:intron |
AAGTCCAAGCAAAAGCAACA+CGG | 0.698511 | 3.2:-86802191 | None:intergenic |
CCATTCTAAAGACCCAACCG+CGG | 0.709208 | 3.2:-86808647 | None:intergenic |
GTGGCCGGAGAATATTGCGG+CGG | 0.727138 | 3.2:-86801774 | None:intergenic |
AGTGTGGCCGGAGAATATTG+CGG | 0.784936 | 3.2:-86801777 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 86801640 | 86811578 | 86801640 | ID=MS.gene014966 |
chr3.2 | mRNA | 86801640 | 86811578 | 86801640 | ID=MS.gene014966.t1;Parent=MS.gene014966 |
chr3.2 | exon | 86801640 | 86802282 | 86801640 | ID=MS.gene014966.t1.exon1;Parent=MS.gene014966.t1 |
chr3.2 | CDS | 86801640 | 86802282 | 86801640 | ID=cds.MS.gene014966.t1;Parent=MS.gene014966.t1 |
chr3.2 | exon | 86802648 | 86802725 | 86802648 | ID=MS.gene014966.t1.exon2;Parent=MS.gene014966.t1 |
chr3.2 | CDS | 86802648 | 86802725 | 86802648 | ID=cds.MS.gene014966.t1;Parent=MS.gene014966.t1 |
chr3.2 | exon | 86803121 | 86803218 | 86803121 | ID=MS.gene014966.t1.exon3;Parent=MS.gene014966.t1 |
chr3.2 | CDS | 86803121 | 86803218 | 86803121 | ID=cds.MS.gene014966.t1;Parent=MS.gene014966.t1 |
chr3.2 | exon | 86803332 | 86803385 | 86803332 | ID=MS.gene014966.t1.exon4;Parent=MS.gene014966.t1 |
chr3.2 | CDS | 86803332 | 86803385 | 86803332 | ID=cds.MS.gene014966.t1;Parent=MS.gene014966.t1 |
chr3.2 | exon | 86803595 | 86803681 | 86803595 | ID=MS.gene014966.t1.exon5;Parent=MS.gene014966.t1 |
chr3.2 | CDS | 86803595 | 86803681 | 86803595 | ID=cds.MS.gene014966.t1;Parent=MS.gene014966.t1 |
chr3.2 | exon | 86804381 | 86804545 | 86804381 | ID=MS.gene014966.t1.exon6;Parent=MS.gene014966.t1 |
chr3.2 | CDS | 86804381 | 86804545 | 86804381 | ID=cds.MS.gene014966.t1;Parent=MS.gene014966.t1 |
chr3.2 | exon | 86804828 | 86804938 | 86804828 | ID=MS.gene014966.t1.exon7;Parent=MS.gene014966.t1 |
chr3.2 | CDS | 86804828 | 86804938 | 86804828 | ID=cds.MS.gene014966.t1;Parent=MS.gene014966.t1 |
chr3.2 | exon | 86805080 | 86805148 | 86805080 | ID=MS.gene014966.t1.exon8;Parent=MS.gene014966.t1 |
chr3.2 | CDS | 86805080 | 86805148 | 86805080 | ID=cds.MS.gene014966.t1;Parent=MS.gene014966.t1 |
chr3.2 | exon | 86805763 | 86805872 | 86805763 | ID=MS.gene014966.t1.exon9;Parent=MS.gene014966.t1 |
chr3.2 | CDS | 86805763 | 86805872 | 86805763 | ID=cds.MS.gene014966.t1;Parent=MS.gene014966.t1 |
chr3.2 | exon | 86806710 | 86806815 | 86806710 | ID=MS.gene014966.t1.exon10;Parent=MS.gene014966.t1 |
chr3.2 | CDS | 86806710 | 86806815 | 86806710 | ID=cds.MS.gene014966.t1;Parent=MS.gene014966.t1 |
chr3.2 | exon | 86807296 | 86807362 | 86807296 | ID=MS.gene014966.t1.exon11;Parent=MS.gene014966.t1 |
chr3.2 | CDS | 86807296 | 86807362 | 86807296 | ID=cds.MS.gene014966.t1;Parent=MS.gene014966.t1 |
chr3.2 | exon | 86807603 | 86807682 | 86807603 | ID=MS.gene014966.t1.exon12;Parent=MS.gene014966.t1 |
chr3.2 | CDS | 86807603 | 86807682 | 86807603 | ID=cds.MS.gene014966.t1;Parent=MS.gene014966.t1 |
chr3.2 | exon | 86808418 | 86808869 | 86808418 | ID=MS.gene014966.t1.exon13;Parent=MS.gene014966.t1 |
chr3.2 | CDS | 86808418 | 86808869 | 86808418 | ID=cds.MS.gene014966.t1;Parent=MS.gene014966.t1 |
chr3.2 | exon | 86809641 | 86809815 | 86809641 | ID=MS.gene014966.t1.exon14;Parent=MS.gene014966.t1 |
chr3.2 | CDS | 86809641 | 86809815 | 86809641 | ID=cds.MS.gene014966.t1;Parent=MS.gene014966.t1 |
chr3.2 | exon | 86810564 | 86810695 | 86810564 | ID=MS.gene014966.t1.exon15;Parent=MS.gene014966.t1 |
chr3.2 | CDS | 86810564 | 86810695 | 86810564 | ID=cds.MS.gene014966.t1;Parent=MS.gene014966.t1 |
chr3.2 | exon | 86811135 | 86811285 | 86811135 | ID=MS.gene014966.t1.exon16;Parent=MS.gene014966.t1 |
chr3.2 | CDS | 86811135 | 86811285 | 86811135 | ID=cds.MS.gene014966.t1;Parent=MS.gene014966.t1 |
chr3.2 | exon | 86811484 | 86811578 | 86811484 | ID=MS.gene014966.t1.exon17;Parent=MS.gene014966.t1 |
chr3.2 | CDS | 86811484 | 86811578 | 86811484 | ID=cds.MS.gene014966.t1;Parent=MS.gene014966.t1 |
Gene Sequence |
Protein sequence |