Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023338.t1 | RHN42417.1 | 96.3 | 535 | 20 | 0 | 1 | 535 | 1 | 535 | 1.20E-290 | 1008.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023338.t1 | O80505 | 70.7 | 502 | 129 | 1 | 31 | 532 | 22 | 505 | 3.6e-211 | 735.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023338.t1 | A0A396GUX5 | 96.3 | 535 | 20 | 0 | 1 | 535 | 1 | 535 | 8.7e-291 | 1008.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene023338 | MS.gene070560 | PPI |
| MS.gene023338 | MS.gene032882 | PPI |
| MS.gene023338 | MS.gene55207 | PPI |
| MS.gene023338 | MS.gene77418 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023338.t1 | MTR_5g077540 | 92.897 | 535 | 18 | 1 | 1 | 535 | 1 | 515 | 0.0 | 1000 |
| MS.gene023338.t1 | MTR_6g017315 | 30.677 | 251 | 152 | 7 | 43 | 277 | 67 | 311 | 1.70e-25 | 108 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023338.t1 | AT2G44660 | 69.423 | 520 | 141 | 1 | 13 | 532 | 4 | 505 | 0.0 | 725 |
| MS.gene023338.t1 | AT5G38460 | 26.234 | 385 | 227 | 12 | 43 | 409 | 72 | 417 | 5.69e-25 | 108 |
| MS.gene023338.t1 | AT5G38460 | 26.234 | 385 | 227 | 12 | 43 | 409 | 72 | 417 | 5.69e-25 | 108 |
Find 121 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGATTTGTCTCTTCTTTA+TGG | 0.059585 | 4.3:+16920100 | MS.gene023338:CDS |
| GTTGATTTCACTTTCGTATT+TGG | 0.171552 | 4.3:+16920255 | MS.gene023338:CDS |
| CTGATTTGTCTCTTCTTTAT+GGG | 0.190540 | 4.3:+16920101 | MS.gene023338:CDS |
| TTATAGACTTACTAGGAATT+TGG | 0.215734 | 4.3:+16920126 | MS.gene023338:CDS |
| CTTTAGTCGACTCTTGATTA+TGG | 0.218008 | 4.3:+16920411 | MS.gene023338:CDS |
| TGTTGGGGTGGAATTGTAAA+AGG | 0.236657 | 4.3:+16920388 | MS.gene023338:CDS |
| ACCCGAGGTAGAACACTAAA+AGG | 0.263152 | 4.3:-16921516 | None:intergenic |
| AACTACCTTTAGATTCAAAT+TGG | 0.264867 | 4.3:-16923874 | None:intergenic |
| CGAGAAAGCAAAAGTTGATT+TGG | 0.269970 | 4.3:+16920152 | MS.gene023338:CDS |
| TGATTTGGTCGTTGGTTATT+TGG | 0.291950 | 4.3:+16920167 | MS.gene023338:CDS |
| GCAGTGTTTGCATCCGCATT+TGG | 0.292719 | 4.3:+16920448 | MS.gene023338:CDS |
| AGTGCGGATGTGAGGAATAA+TGG | 0.296933 | 4.3:+16923899 | MS.gene023338:CDS |
| GTCTTGTAGTTGTAGAGATA+TGG | 0.316331 | 4.3:+16923960 | MS.gene023338:CDS |
| AAAATATGACAGTAAATCTT+TGG | 0.322386 | 4.3:-16920078 | None:intergenic |
| TCCATCCGTGACATTTATAA+TGG | 0.338338 | 4.3:+16922834 | MS.gene023338:CDS |
| CAGTGTTTGCATCCGCATTT+GGG | 0.343917 | 4.3:+16920449 | MS.gene023338:CDS |
| CAATACAATGGATTTCTCAT+TGG | 0.356779 | 4.3:+16920226 | MS.gene023338:CDS |
| AATACAATGGATTTCTCATT+GGG | 0.357750 | 4.3:+16920227 | MS.gene023338:CDS |
| TTTGTTGAGGCACTATTGTT+GGG | 0.365288 | 4.3:+16920372 | MS.gene023338:CDS |
| CTTGATTGAGAAGATATATC+TGG | 0.366761 | 4.3:+16923934 | MS.gene023338:CDS |
| TTTAGTCGACTCTTGATTAT+GGG | 0.371488 | 4.3:+16920412 | MS.gene023338:CDS |
| ATTTGTTGAGGCACTATTGT+TGG | 0.375498 | 4.3:+16920371 | MS.gene023338:CDS |
| AACGATTGTTTCCATTTGGC+AGG | 0.385919 | 4.3:+16921346 | MS.gene023338:CDS |
| CTAGTAATCCTTTGTGGCCG+TGG | 0.386080 | 4.3:-16922901 | None:intergenic |
| AAAGCCAGACCACATCAAAA+TGG | 0.393622 | 4.3:-16923786 | None:intergenic |
| TCCTAAAATAGTGCACCTTC+AGG | 0.394307 | 4.3:+16920018 | MS.gene023338:CDS |
| TGAATGAAGCTGCTGGTGTC+TGG | 0.395897 | 4.3:-16921467 | None:intergenic |
| ATCTCTGTATACTGTGCTCT+GGG | 0.396880 | 4.3:+16924043 | MS.gene023338:CDS |
| GGGGCTTTGCCATGCATACT+GGG | 0.398330 | 4.3:+16921368 | MS.gene023338:CDS |
| GCCTTCCTACTCAGAAAACT+TGG | 0.399995 | 4.3:+16921435 | MS.gene023338:CDS |
| GATCTCTGTATACTGTGCTC+TGG | 0.401154 | 4.3:+16924042 | MS.gene023338:CDS |
| GGATCATGTACTCTTGGATA+TGG | 0.409280 | 4.3:+16924065 | MS.gene023338:CDS |
| CTCTGGGGATCATGTACTCT+TGG | 0.411393 | 4.3:+16924059 | MS.gene023338:CDS |
| TCTTGTAGTTGTAGAGATAT+GGG | 0.420668 | 4.3:+16923961 | MS.gene023338:CDS |
| ATCCAACGATTGTTTCCATT+TGG | 0.422788 | 4.3:+16921342 | MS.gene023338:CDS |
| AGGCGAGTGGAATTACAAAA+TGG | 0.425510 | 4.3:-16922990 | None:intergenic |
| ACTTTGAGGTGCACCGCAAT+TGG | 0.429070 | 4.3:+16919867 | MS.gene023338:CDS |
| CAATGAGAAATCCATTGTAT+TGG | 0.430292 | 4.3:-16920225 | None:intergenic |
| ATGGGGTTTATAGACTTACT+AGG | 0.435029 | 4.3:+16920119 | MS.gene023338:CDS |
| GAGGAAGGAAGGGATTTGTT+AGG | 0.443108 | 4.3:+16920277 | MS.gene023338:CDS |
| GCAAAAGTTGATTTGGTCGT+TGG | 0.444287 | 4.3:+16920159 | MS.gene023338:CDS |
| TTACCGTAGTACAGACTTTG+AGG | 0.448967 | 4.3:+16919853 | MS.gene023338:CDS |
| AAGTTAATGAGATTTAACTA+TGG | 0.453461 | 4.3:-16924098 | None:intergenic |
| TCATTCACTGCAGGGCTAGT+AGG | 0.458683 | 4.3:+16921483 | MS.gene023338:CDS |
| CGGGGTTTGTGCTGCAACAA+AGG | 0.460841 | 4.3:-16923010 | None:intergenic |
| TTTGAATTATAGCTCGAATA+CGG | 0.465209 | 4.3:+16920045 | MS.gene023338:CDS |
| TGAGGTGCACCGCAATTGGC+TGG | 0.473857 | 4.3:+16919871 | MS.gene023338:CDS |
| TACTACGGTAAGACGGGAAA+AGG | 0.474296 | 4.3:-16919841 | None:intergenic |
| ATCCATCTAGTAATCCTTTG+TGG | 0.486113 | 4.3:-16922907 | None:intergenic |
| CCCGAGGTAGAACACTAAAA+GGG | 0.487237 | 4.3:-16921515 | None:intergenic |
| TGATTTGTCTCTTCTTTATG+GGG | 0.493698 | 4.3:+16920102 | MS.gene023338:CDS |
| GTAGCCCGAAAACGACTCTC+TGG | 0.496588 | 4.3:+16919783 | MS.gene023338:CDS |
| GCTGGCCAATTTGAATCTAA+AGG | 0.503438 | 4.3:+16923869 | MS.gene023338:CDS |
| GGCCACAAAGGATTACTAGA+TGG | 0.508254 | 4.3:+16922905 | MS.gene023338:CDS |
| TCAAAGTACCACTGTGAAAG+AGG | 0.509216 | 4.3:-16919911 | None:intergenic |
| GATTTCACTTTCGTATTTGG+AGG | 0.509283 | 4.3:+16920258 | MS.gene023338:CDS |
| CCAGCAGCTTCATTCACTGC+AGG | 0.510812 | 4.3:+16921474 | MS.gene023338:CDS |
| CTTGAAAAGACAAGGAGATA+AGG | 0.519768 | 4.3:-16922866 | None:intergenic |
| AGTATACAGAGATCAACATA+AGG | 0.521972 | 4.3:-16924033 | None:intergenic |
| TTTCGTATTTGGAGGAAGGA+AGG | 0.523282 | 4.3:+16920266 | MS.gene023338:CDS |
| GTATACAGAGATCAACATAA+GGG | 0.524262 | 4.3:-16924032 | None:intergenic |
| CGATTGTTTCCATTTGGCAG+GGG | 0.535880 | 4.3:+16921348 | MS.gene023338:CDS |
| CGAAATATGCAAAGAACGGC+GGG | 0.536379 | 4.3:-16919961 | None:intergenic |
| TTCGTATTTGGAGGAAGGAA+GGG | 0.537577 | 4.3:+16920267 | MS.gene023338:CDS |
| CCTTCCTACTCAGAAAACTT+GGG | 0.538732 | 4.3:+16921436 | MS.gene023338:CDS |
| TCATATTTACCTGTCCAAGA+TGG | 0.540706 | 4.3:-16920480 | None:intergenic |
| TTGAGGCACTATTGTTGGGG+TGG | 0.542164 | 4.3:+16920376 | MS.gene023338:CDS |
| ACGATTGTTTCCATTTGGCA+GGG | 0.544994 | 4.3:+16921347 | MS.gene023338:CDS |
| CTTTGTTGCAGCACAAACCC+CGG | 0.552369 | 4.3:+16923011 | MS.gene023338:CDS |
| TCAAGGCTTGGAAGAATCCA+CGG | 0.552385 | 4.3:+16922884 | MS.gene023338:CDS |
| CTTTAAACATTTATTTGCAG+TGG | 0.553524 | 4.3:+16920327 | MS.gene023338:CDS |
| TCACTTTCGTATTTGGAGGA+AGG | 0.558171 | 4.3:+16920262 | MS.gene023338:CDS |
| AGTACCACTGTGAAAGAGGA+AGG | 0.563847 | 4.3:-16919907 | None:intergenic |
| GTAATCTAGAGTCCACGGAC+TGG | 0.564381 | 4.3:-16919939 | None:intergenic |
| CATGTGCATTTCCAATACAA+TGG | 0.568701 | 4.3:+16920214 | MS.gene023338:CDS |
| AGTCTGTACTACGGTAAGAC+GGG | 0.568977 | 4.3:-16919847 | None:intergenic |
| GATTGTTTCCATTTGGCAGG+GGG | 0.570965 | 4.3:+16921349 | MS.gene023338:CDS |
| AATTTGGGGCCCAGTATGCA+TGG | 0.572693 | 4.3:-16921377 | None:intergenic |
| AAGTCTGTACTACGGTAAGA+CGG | 0.576605 | 4.3:-16919848 | None:intergenic |
| GGAAGAATCCACGGCCACAA+AGG | 0.577318 | 4.3:+16922893 | MS.gene023338:CDS |
| TGCCAAATGGAAACAATCGT+TGG | 0.579040 | 4.3:-16921344 | None:intergenic |
| AGTCGACTCTTGATTATGGG+AGG | 0.581077 | 4.3:+16920415 | MS.gene023338:CDS |
| GTAGTTTAAGTGCGGATGTG+AGG | 0.581167 | 4.3:+16923891 | MS.gene023338:CDS |
| GAAGGAAGGGATTTGTTAGG+TGG | 0.581280 | 4.3:+16920280 | MS.gene023338:CDS |
| TCTTGTGCCTCAAAGAGTAG+TGG | 0.581614 | 4.3:-16923728 | None:intergenic |
| TTCCAAGCCTTGAAAAGACA+AGG | 0.583599 | 4.3:-16922874 | None:intergenic |
| TTGTTGAGGCACTATTGTTG+GGG | 0.588162 | 4.3:+16920373 | MS.gene023338:CDS |
| ACCATTATAAATGTCACGGA+TGG | 0.588372 | 4.3:-16922835 | None:intergenic |
| ATTGAGAAGATATATCTGGT+TGG | 0.589564 | 4.3:+16923938 | MS.gene023338:CDS |
| CATTGTATTGGAAATGCACA+TGG | 0.594864 | 4.3:-16920213 | None:intergenic |
| TAAAATAGTGCACCTTCAGG+AGG | 0.595849 | 4.3:+16920021 | MS.gene023338:CDS |
| CCTGCAGTGAATGAAGCTGC+TGG | 0.597285 | 4.3:-16921474 | None:intergenic |
| AACAAATAAACAAAATACAC+AGG | 0.600934 | 4.3:-16920355 | None:intergenic |
| CAGAACCATTATAAATGTCA+CGG | 0.604638 | 4.3:-16922839 | None:intergenic |
| TGGGTGGCATGTGCATGAGA+AGG | 0.606139 | 4.3:+16922960 | MS.gene023338:CDS |
| TGGTCCACTATTAAAAGCAT+CGG | 0.614371 | 4.3:-16920193 | None:intergenic |
| ATCTAAAGGTAGTTTAAGTG+CGG | 0.614446 | 4.3:+16923883 | MS.gene023338:CDS |
| GGCGGGTAATCTAGAGTCCA+CGG | 0.622748 | 4.3:-16919944 | None:intergenic |
| TTCTATATCATGTCAGACAA+AGG | 0.623344 | 4.3:+16921408 | MS.gene023338:CDS |
| AGCTTATCACCCAAAAGCAG+AGG | 0.625011 | 4.3:-16923998 | None:intergenic |
| AAAATAGTGCACCTTCAGGA+GGG | 0.628508 | 4.3:+16920022 | MS.gene023338:CDS |
| GAATTATAGCTCGAATACGG+CGG | 0.631955 | 4.3:+16920048 | MS.gene023338:CDS |
| CGTTCGAAATATGCAAAGAA+CGG | 0.633662 | 4.3:-16919965 | None:intergenic |
| TCGAAATATGCAAAGAACGG+CGG | 0.641556 | 4.3:-16919962 | None:intergenic |
| CAGCAGCTTCATTCACTGCA+GGG | 0.642240 | 4.3:+16921475 | MS.gene023338:CDS |
| TATAATTCAAACCCTCCTGA+AGG | 0.642863 | 4.3:-16920033 | None:intergenic |
| CCGAGGTAGAACACTAAAAG+GGG | 0.647722 | 4.3:-16921514 | None:intergenic |
| CTTGTAGTTGTAGAGATATG+GGG | 0.647851 | 4.3:+16923962 | MS.gene023338:CDS |
| GCCCGAAAACGACTCTCTGG+TGG | 0.648251 | 4.3:+16919786 | MS.gene023338:CDS |
| GTGTCAATGCCAGCCAATTG+CGG | 0.652158 | 4.3:-16919880 | None:intergenic |
| ATATCATATGCGTATACCTG+TGG | 0.657422 | 4.3:+16922928 | MS.gene023338:CDS |
| AGGTAGAACACTAAAAGGGG+AGG | 0.659639 | 4.3:-16921511 | None:intergenic |
| GTACCACTGTGAAAGAGGAA+GGG | 0.661428 | 4.3:-16919906 | None:intergenic |
| GCACCTCAAAGTCTGTACTA+CGG | 0.663739 | 4.3:-16919856 | None:intergenic |
| TATACAGAGATCAACATAAG+GGG | 0.666217 | 4.3:-16924031 | None:intergenic |
| GCTTATCACCCAAAAGCAGA+GGG | 0.668480 | 4.3:-16923997 | None:intergenic |
| TGTGCTGCAACAAAGGCGAG+TGG | 0.681218 | 4.3:-16923003 | None:intergenic |
| ACTTTGACGAGACCAGTCCG+TGG | 0.701251 | 4.3:+16919927 | MS.gene023338:CDS |
| TGTTGCAGCACAAACCCCGG+AGG | 0.712015 | 4.3:+16923014 | MS.gene023338:CDS |
| ATTCCCTTCCTCTTTCACAG+TGG | 0.716197 | 4.3:+16919903 | MS.gene023338:CDS |
| TCTCTGTATACTGTGCTCTG+GGG | 0.735758 | 4.3:+16924044 | MS.gene023338:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAGTTTAATAGAAAAA+TGG | - | chr4.3:16923315-16923334 | None:intergenic | 10.0% |
| !!! | AGATTCTTATTTTTATTTTT+GGG | + | chr4.3:16923278-16923297 | MS.gene023338:intron | 10.0% |
| !!! | TAGATTCTTATTTTTATTTT+TGG | + | chr4.3:16923277-16923296 | MS.gene023338:intron | 10.0% |
| !!! | TTTATTTTAATAATTGGTTA+TGG | - | chr4.3:16923224-16923243 | None:intergenic | 10.0% |
| !!! | TTTTTCTATTAAACTTTTAT+CGG | + | chr4.3:16923315-16923334 | MS.gene023338:intron | 10.0% |
| !! | CCAATTATTAAAATAAAGTT+TGG | + | chr4.3:16923227-16923246 | MS.gene023338:intron | 15.0% |
| !! | CTTCTTCAAAAAAAAAAAAT+AGG | + | chr4.3:16922378-16922397 | MS.gene023338:intron | 15.0% |
| !! | GATAATAACTTAAAATTAGT+TGG | + | chr4.3:16923493-16923512 | MS.gene023338:intron | 15.0% |
| !! | GTGAAATATTATGTTATAAT+AGG | + | chr4.3:16922238-16922257 | MS.gene023338:intron | 15.0% |
| !! | GTGAAATATTATGTTATAAT+TGG | + | chr4.3:16922238-16922257 | MS.gene023338:intron | 15.0% |
| !! | TCATCATAACAAATATTTAT+CGG | - | chr4.3:16923615-16923634 | None:intergenic | 15.0% |
| !!! | ACTAATTTTAAGTTATTATC+AGG | - | chr4.3:16923493-16923512 | None:intergenic | 15.0% |
| !!! | ATATTTCTATTCTTAGAAAA+TGG | - | chr4.3:16921842-16921861 | None:intergenic | 15.0% |
| !!! | CCAAACTTTATTTTAATAAT+TGG | - | chr4.3:16923230-16923249 | None:intergenic | 15.0% |
| !!! | TATTTCTATTCTTAGAAAAT+GGG | - | chr4.3:16921841-16921860 | None:intergenic | 15.0% |
| !!! | TTTATCAATGTTTCTATTTT+TGG | - | chr4.3:16922089-16922108 | None:intergenic | 15.0% |
| !!! | TTTTACATTTTACACATTTT+TGG | + | chr4.3:16922423-16922442 | MS.gene023338:intron | 15.0% |
| !! | AAAATATGACAGTAAATCTT+TGG | - | chr4.3:16920081-16920100 | None:intergenic | 20.0% |
| !! | AACAAATAAACAAAATACAC+AGG | - | chr4.3:16920358-16920377 | None:intergenic | 20.0% |
| !! | AATATAAATGTTCAAATGAC+AGG | + | chr4.3:16922163-16922182 | MS.gene023338:intron | 20.0% |
| !! | ATCAACAAAATGAACAAAAA+TGG | - | chr4.3:16919999-16920018 | None:intergenic | 20.0% |
| !! | ATCACTTTAATAAGATCATA+AGG | - | chr4.3:16923378-16923397 | None:intergenic | 20.0% |
| !! | GAAGAAAAAGATAACATTAT+AGG | - | chr4.3:16923104-16923123 | None:intergenic | 20.0% |
| !! | TTGTTAATTGCTAAATAGAA+AGG | + | chr4.3:16921577-16921596 | MS.gene023338:intron | 20.0% |
| !!! | ATTTTCGACAAAATTATCAA+TGG | - | chr4.3:16923196-16923215 | None:intergenic | 20.0% |
| !!! | CTCATAAGGTTATTTAATTT+AGG | - | chr4.3:16921087-16921106 | None:intergenic | 20.0% |
| !!! | CTTTAACTTGACAATTTTTA+TGG | + | chr4.3:16923252-16923271 | MS.gene023338:intron | 20.0% |
| !!! | TGTATTTTGTTTATTTGTTG+AGG | + | chr4.3:16920359-16920378 | MS.gene023338:CDS | 20.0% |
| !!! | TTAATTTAGGTTTGTTGTTA+TGG | - | chr4.3:16921074-16921093 | None:intergenic | 20.0% |
| !!! | TTTTCGACAAAATTATCAAT+GGG | - | chr4.3:16923195-16923214 | None:intergenic | 20.0% |
| ! | AAAATTCAATCTGTATGACT+TGG | - | chr4.3:16921772-16921791 | None:intergenic | 25.0% |
| ! | AACTACCTTTAGATTCAAAT+TGG | - | chr4.3:16923877-16923896 | None:intergenic | 25.0% |
| ! | AATAAGATCATAAGGAAAGA+TGG | - | chr4.3:16923370-16923389 | None:intergenic | 25.0% |
| ! | AATACAAGAATCTAACAAGA+AGG | - | chr4.3:16921224-16921243 | None:intergenic | 25.0% |
| ! | AATGGGAATAAGAAAGTTTA+GGG | - | chr4.3:16923178-16923197 | None:intergenic | 25.0% |
| ! | ATACAAGAATCTAACAAGAA+GGG | - | chr4.3:16921223-16921242 | None:intergenic | 25.0% |
| ! | ATATAGAACACCCAAAAATT+TGG | - | chr4.3:16921396-16921415 | None:intergenic | 25.0% |
| ! | CATTCGTGAAACATTATAAT+TGG | + | chr4.3:16921941-16921960 | MS.gene023338:intron | 25.0% |
| ! | CTTTAAACATTTATTTGCAG+TGG | + | chr4.3:16920327-16920346 | MS.gene023338:CDS | 25.0% |
| ! | TAGTGCAAGAATTTAGAAAT+GGG | - | chr4.3:16920561-16920580 | None:intergenic | 25.0% |
| ! | TATAGAACACCCAAAAATTT+GGG | - | chr4.3:16921395-16921414 | None:intergenic | 25.0% |
| ! | TCAAGCATAATAAACGATTA+AGG | + | chr4.3:16923558-16923577 | MS.gene023338:intron | 25.0% |
| ! | TCCTATTTATACTTGAAATC+AGG | - | chr4.3:16920865-16920884 | None:intergenic | 25.0% |
| ! | TTAGTGCAAGAATTTAGAAA+TGG | - | chr4.3:16920562-16920581 | None:intergenic | 25.0% |
| ! | TTATAGACTTACTAGGAATT+TGG | + | chr4.3:16920126-16920145 | MS.gene023338:CDS | 25.0% |
| ! | TTTGAATTATAGCTCGAATA+CGG | + | chr4.3:16920045-16920064 | MS.gene023338:CDS | 25.0% |
| !! | AATACAATGGATTTCTCATT+GGG | + | chr4.3:16920227-16920246 | MS.gene023338:CDS | 25.0% |
| !! | ACCTGATTTCAAGTATAAAT+AGG | + | chr4.3:16920861-16920880 | MS.gene023338:intron | 25.0% |
| !! | ATTCTATTCTTTTGCAAGAA+GGG | - | chr4.3:16921649-16921668 | None:intergenic | 25.0% |
| !! | TATTCTATTCTTTTGCAAGA+AGG | - | chr4.3:16921650-16921669 | None:intergenic | 25.0% |
| !! | TGAAAAGTATAATTGCTTCT+TGG | - | chr4.3:16923588-16923607 | None:intergenic | 25.0% |
| !! | TGATAATTTTGTCGAAAATG+AGG | + | chr4.3:16923197-16923216 | MS.gene023338:intron | 25.0% |
| !! | TGTCATGCAATAATTTTATC+TGG | - | chr4.3:16921118-16921137 | None:intergenic | 25.0% |
| !!! | AGGAATAATGGTTTTGTTAT+TGG | + | chr4.3:16923911-16923930 | MS.gene023338:CDS | 25.0% |
| !!! | CATTACTTTTTGTTGTCAAT+AGG | + | chr4.3:16923045-16923064 | MS.gene023338:CDS | 25.0% |
| AACGTCAATTGAAAAGATCT+CGG | - | chr4.3:16922699-16922718 | None:intergenic | 30.0% | |
| AATCCCTATGTGAAATGATA+TGG | + | chr4.3:16920731-16920750 | MS.gene023338:intron | 30.0% | |
| AGTATACAGAGATCAACATA+AGG | - | chr4.3:16924036-16924055 | None:intergenic | 30.0% | |
| AGTGCAAGAATTTAGAAATG+GGG | - | chr4.3:16920560-16920579 | None:intergenic | 30.0% | |
| ATAGAACACCCAAAAATTTG+GGG | - | chr4.3:16921394-16921413 | None:intergenic | 30.0% | |
| ATCGGATGATTCTTATTACT+TGG | + | chr4.3:16923333-16923352 | MS.gene023338:intron | 30.0% | |
| ATCTAAAGGTAGTTTAAGTG+CGG | + | chr4.3:16923883-16923902 | MS.gene023338:CDS | 30.0% | |
| ATCTGGATACATAACTCATA+AGG | - | chr4.3:16921101-16921120 | None:intergenic | 30.0% | |
| ATGATGAGTGAGAATGTTTA+TGG | + | chr4.3:16923628-16923647 | MS.gene023338:intron | 30.0% | |
| ATTAAAGTGATCTTCACACA+AGG | + | chr4.3:16923387-16923406 | MS.gene023338:intron | 30.0% | |
| ATTGAGAAGATATATCTGGT+TGG | + | chr4.3:16923938-16923957 | MS.gene023338:CDS | 30.0% | |
| CAATGAGAAATCCATTGTAT+TGG | - | chr4.3:16920228-16920247 | None:intergenic | 30.0% | |
| CAATGGGAATAAGAAAGTTT+AGG | - | chr4.3:16923179-16923198 | None:intergenic | 30.0% | |
| CAGAACCATTATAAATGTCA+CGG | - | chr4.3:16922842-16922861 | None:intergenic | 30.0% | |
| CCAAAAAAATCAATTATGCG+AGG | - | chr4.3:16921287-16921306 | None:intergenic | 30.0% | |
| CGAAGATATGAAAGTTGTTT+GGG | + | chr4.3:16921016-16921035 | MS.gene023338:intron | 30.0% | |
| CTACCATATCATTTCACATA+GGG | - | chr4.3:16920737-16920756 | None:intergenic | 30.0% | |
| CTTGATTGAGAAGATATATC+TGG | + | chr4.3:16923934-16923953 | MS.gene023338:CDS | 30.0% | |
| GAAGATATGAAAGTTGTTTG+GGG | + | chr4.3:16921017-16921036 | MS.gene023338:intron | 30.0% | |
| GATATGGTAGATGAATGTTA+AGG | + | chr4.3:16920747-16920766 | MS.gene023338:intron | 30.0% | |
| GTATACAGAGATCAACATAA+GGG | - | chr4.3:16924035-16924054 | None:intergenic | 30.0% | |
| TATAACATCTCGATCTTGTT+GGG | - | chr4.3:16922143-16922162 | None:intergenic | 30.0% | |
| TATACAGAGATCAACATAAG+GGG | - | chr4.3:16924034-16924053 | None:intergenic | 30.0% | |
| TATTCTTAGAAAATGGGATG+AGG | - | chr4.3:16921835-16921854 | None:intergenic | 30.0% | |
| TCGAAGATATGAAAGTTGTT+TGG | + | chr4.3:16921015-16921034 | MS.gene023338:intron | 30.0% | |
| TCGTGAAACATTATAATTGG+TGG | + | chr4.3:16921944-16921963 | MS.gene023338:intron | 30.0% | |
| TCTACCATATCATTTCACAT+AGG | - | chr4.3:16920738-16920757 | None:intergenic | 30.0% | |
| TCTTGTAGTTGTAGAGATAT+GGG | + | chr4.3:16923961-16923980 | MS.gene023338:CDS | 30.0% | |
| TTAAAGTGATCTTCACACAA+GGG | + | chr4.3:16923388-16923407 | MS.gene023338:intron | 30.0% | |
| TTATAACATCTCGATCTTGT+TGG | - | chr4.3:16922144-16922163 | None:intergenic | 30.0% | |
| TTCTATATCATGTCAGACAA+AGG | + | chr4.3:16921408-16921427 | MS.gene023338:CDS | 30.0% | |
| TTTATACTTGAAATCAGGTC+AGG | - | chr4.3:16920860-16920879 | None:intergenic | 30.0% | |
| ! | AAAGGAAAAAAAAGCACACA+AGG | + | chr4.3:16921595-16921614 | MS.gene023338:intron | 30.0% |
| ! | AAGGAAAAAAAAGCACACAA+GGG | + | chr4.3:16921596-16921615 | MS.gene023338:intron | 30.0% |
| ! | ATACCTGTGGTTTTCTTTTT+GGG | + | chr4.3:16922941-16922960 | MS.gene023338:CDS | 30.0% |
| ! | CAATACAATGGATTTCTCAT+TGG | + | chr4.3:16920226-16920245 | MS.gene023338:CDS | 30.0% |
| ! | CTGATTTGTCTCTTCTTTAT+GGG | + | chr4.3:16920101-16920120 | MS.gene023338:CDS | 30.0% |
| ! | CTTCCTGAAAAAAGTTTTAC+AGG | + | chr4.3:16920593-16920612 | MS.gene023338:intron | 30.0% |
| ! | GAAAAGGAGAACTTTTATAC+AGG | - | chr4.3:16919828-16919847 | None:intergenic | 30.0% |
| ! | GTTGATTTCACTTTCGTATT+TGG | + | chr4.3:16920255-16920274 | MS.gene023338:CDS | 30.0% |
| ! | TAGTTACTGAGCTTGATTTT+TGG | + | chr4.3:16922050-16922069 | MS.gene023338:intron | 30.0% |
| ! | TATACCTGTGGTTTTCTTTT+TGG | + | chr4.3:16922940-16922959 | MS.gene023338:CDS | 30.0% |
| ! | TCTGATTTGTCTCTTCTTTA+TGG | + | chr4.3:16920100-16920119 | MS.gene023338:CDS | 30.0% |
| ! | TGATTTGTCTCTTCTTTATG+GGG | + | chr4.3:16920102-16920121 | MS.gene023338:CDS | 30.0% |
| ! | TTCTATTCTTTTGCAAGAAG+GGG | - | chr4.3:16921648-16921667 | None:intergenic | 30.0% |
| ! | TTTAGTCGACTCTTGATTAT+GGG | + | chr4.3:16920412-16920431 | MS.gene023338:CDS | 30.0% |
| !! | AGCAACAACAGAATTTTGAT+AGG | - | chr4.3:16923758-16923777 | None:intergenic | 30.0% |
| !! | TCTTCGAACATTTATTTCTG+TGG | - | chr4.3:16921002-16921021 | None:intergenic | 30.0% |
| !!! | ACTCCTGTAAAACTTTTTTC+AGG | - | chr4.3:16920599-16920618 | None:intergenic | 30.0% |
| !!! | CATATTTTGATGTTGAACTG+TGG | - | chr4.3:16921920-16921939 | None:intergenic | 30.0% |
| !!! | CCTCGCATAATTGATTTTTT+TGG | + | chr4.3:16921284-16921303 | MS.gene023338:intron | 30.0% |
| !!! | TATTTTGAGTTACCAACTCT+CGG | - | chr4.3:16921896-16921915 | None:intergenic | 30.0% |
| AAACAAGGGAGAAAATGGTA+TGG | - | chr4.3:16920642-16920661 | None:intergenic | 35.0% | |
| ACCATTATAAATGTCACGGA+TGG | - | chr4.3:16922838-16922857 | None:intergenic | 35.0% | |
| AGTTACATCATGACACTCTA+TGG | + | chr4.3:16920777-16920796 | MS.gene023338:intron | 35.0% | |
| ATAACATCTCGATCTTGTTG+GGG | - | chr4.3:16922142-16922161 | None:intergenic | 35.0% | |
| ATATCATATGCGTATACCTG+TGG | + | chr4.3:16922928-16922947 | MS.gene023338:CDS | 35.0% | |
| ATCACTTCTTAACATAAGCC+TGG | - | chr4.3:16922215-16922234 | None:intergenic | 35.0% | |
| ATCCAACGATTGTTTCCATT+TGG | + | chr4.3:16921342-16921361 | MS.gene023338:CDS | 35.0% | |
| ATCCATCTAGTAATCCTTTG+TGG | - | chr4.3:16922910-16922929 | None:intergenic | 35.0% | |
| ATGGGGTTTATAGACTTACT+AGG | + | chr4.3:16920119-16920138 | MS.gene023338:CDS | 35.0% | |
| CATGTGCATTTCCAATACAA+TGG | + | chr4.3:16920214-16920233 | MS.gene023338:CDS | 35.0% | |
| CATTGTATTGGAAATGCACA+TGG | - | chr4.3:16920216-16920235 | None:intergenic | 35.0% | |
| CGTTCGAAATATGCAAAGAA+CGG | - | chr4.3:16919968-16919987 | None:intergenic | 35.0% | |
| CTTGAAAAGACAAGGAGATA+AGG | - | chr4.3:16922869-16922888 | None:intergenic | 35.0% | |
| CTTGTAGTTGTAGAGATATG+GGG | + | chr4.3:16923962-16923981 | MS.gene023338:CDS | 35.0% | |
| GACGTCAATTGAATAGATCT+CGG | - | chr4.3:16922465-16922484 | None:intergenic | 35.0% | |
| GATTTCACTTTCGTATTTGG+AGG | + | chr4.3:16920258-16920277 | MS.gene023338:CDS | 35.0% | |
| GGGGAAACAACATCAAATAT+GGG | - | chr4.3:16920540-16920559 | None:intergenic | 35.0% | |
| GTCTTGTAGTTGTAGAGATA+TGG | + | chr4.3:16923960-16923979 | MS.gene023338:CDS | 35.0% | |
| GTGCAAGAATTTAGAAATGG+GGG | - | chr4.3:16920559-16920578 | None:intergenic | 35.0% | |
| GTTACATCATGACACTCTAT+GGG | + | chr4.3:16920778-16920797 | MS.gene023338:intron | 35.0% | |
| TAGTGGAAAAAGAGAATAGC+AGG | - | chr4.3:16923714-16923733 | None:intergenic | 35.0% | |
| TATAATTCAAACCCTCCTGA+AGG | - | chr4.3:16920036-16920055 | None:intergenic | 35.0% | |
| TCATATTTACCTGTCCAAGA+TGG | - | chr4.3:16920483-16920502 | None:intergenic | 35.0% | |
| TCCATCCGTGACATTTATAA+TGG | + | chr4.3:16922834-16922853 | MS.gene023338:CDS | 35.0% | |
| TGTAATGTCTGAGTTTGAGT+TGG | + | chr4.3:16923452-16923471 | MS.gene023338:intron | 35.0% | |
| ! | AAAGCAGAGGGTGTAAAAAT+TGG | - | chr4.3:16923988-16924007 | None:intergenic | 35.0% |
| ! | AAGTAATGTTTTGCATCCTC+CGG | - | chr4.3:16923033-16923052 | None:intergenic | 35.0% |
| ! | AAGTTCAGCAGTTTTCACTA+AGG | + | chr4.3:16920932-16920951 | MS.gene023338:intron | 35.0% |
| ! | AGAACTTGGTAGCTCAAAAT+GGG | + | chr4.3:16922187-16922206 | MS.gene023338:intron | 35.0% |
| ! | ATTTGTTGAGGCACTATTGT+TGG | + | chr4.3:16920371-16920390 | MS.gene023338:CDS | 35.0% |
| ! | ATTTTTACACCCTCTGCTTT+TGG | + | chr4.3:16923988-16924007 | MS.gene023338:CDS | 35.0% |
| ! | CGAGAAAGCAAAAGTTGATT+TGG | + | chr4.3:16920152-16920171 | MS.gene023338:CDS | 35.0% |
| ! | CTTATCTCCTTGTCTTTTCA+AGG | + | chr4.3:16922867-16922886 | MS.gene023338:CDS | 35.0% |
| ! | CTTTAGTCGACTCTTGATTA+TGG | + | chr4.3:16920411-16920430 | MS.gene023338:CDS | 35.0% |
| ! | GCGTGCTTTTCATTAGTATT+AGG | + | chr4.3:16921694-16921713 | MS.gene023338:intron | 35.0% |
| ! | GCTTTTTGTCATTCAAGTAC+AGG | + | chr4.3:16922536-16922555 | MS.gene023338:intron | 35.0% |
| ! | GTATTGATGTCTTGTGAAGA+GGG | + | chr4.3:16923410-16923429 | MS.gene023338:intron | 35.0% |
| ! | TAAACCCAAGTTTTCTGAGT+AGG | - | chr4.3:16921443-16921462 | None:intergenic | 35.0% |
| ! | TGAAAAGCACGCAGTAAATA+AGG | - | chr4.3:16921686-16921705 | None:intergenic | 35.0% |
| ! | TGGTCCACTATTAAAAGCAT+CGG | - | chr4.3:16920196-16920215 | None:intergenic | 35.0% |
| ! | TTTGTTGAGGCACTATTGTT+GGG | + | chr4.3:16920372-16920391 | MS.gene023338:CDS | 35.0% |
| !! | TGATTTGGTCGTTGGTTATT+TGG | + | chr4.3:16920167-16920186 | MS.gene023338:CDS | 35.0% |
| !! | TTCTTCACTCCATTTTGATG+TGG | + | chr4.3:16923777-16923796 | MS.gene023338:CDS | 35.0% |
| !! | TTTTTACACCCTCTGCTTTT+GGG | + | chr4.3:16923989-16924008 | MS.gene023338:CDS | 35.0% |
| AAAATAGTGCACCTTCAGGA+GGG | + | chr4.3:16920022-16920041 | MS.gene023338:CDS | 40.0% | |
| AAAGCCAGACCACATCAAAA+TGG | - | chr4.3:16923789-16923808 | None:intergenic | 40.0% | |
| AACGATTGTTTCCATTTGGC+AGG | + | chr4.3:16921346-16921365 | MS.gene023338:CDS | 40.0% | |
| AAGGTCTCTTGTGAATGTGT+GGG | + | chr4.3:16920951-16920970 | MS.gene023338:intron | 40.0% | |
| AAGTCTGTACTACGGTAAGA+CGG | - | chr4.3:16919851-16919870 | None:intergenic | 40.0% | |
| ACCCGATATCCACAAAACAA+GGG | - | chr4.3:16920656-16920675 | None:intergenic | 40.0% | |
| ACCTGTCCAAGATGGAAAAA+CGG | - | chr4.3:16920475-16920494 | None:intergenic | 40.0% | |
| ACGATTGTTTCCATTTGGCA+GGG | + | chr4.3:16921347-16921366 | MS.gene023338:CDS | 40.0% | |
| AGGCGAGTGGAATTACAAAA+TGG | - | chr4.3:16922993-16923012 | None:intergenic | 40.0% | |
| AGGTAGTAGAAAACCCACTT+GGG | + | chr4.3:16922258-16922277 | MS.gene023338:intron | 40.0% | |
| ATCTCTGTATACTGTGCTCT+GGG | + | chr4.3:16924043-16924062 | MS.gene023338:CDS | 40.0% | |
| ATTCAAGTACAGGCAGAACT+TGG | + | chr4.3:16922546-16922565 | MS.gene023338:intron | 40.0% | |
| CAAAGTCGGTAGTTGACAAT+TGG | - | chr4.3:16921170-16921189 | None:intergenic | 40.0% | |
| CAATTGAACAGCAACATCTC+AGG | - | chr4.3:16922026-16922045 | None:intergenic | 40.0% | |
| CATGACACTCTATGGGAATA+AGG | + | chr4.3:16920785-16920804 | MS.gene023338:intron | 40.0% | |
| CATTAACCAGTCATCAAGCT+CGG | - | chr4.3:16922493-16922512 | None:intergenic | 40.0% | |
| CCACAAAACAAGGGAGAAAA+TGG | - | chr4.3:16920647-16920666 | None:intergenic | 40.0% | |
| CCTTCCTACTCAGAAAACTT+GGG | + | chr4.3:16921436-16921455 | MS.gene023338:CDS | 40.0% | |
| GAATTATAGCTCGAATACGG+CGG | + | chr4.3:16920048-16920067 | MS.gene023338:CDS | 40.0% | |
| GCTCACACAAAGAAAAAAGC+TGG | + | chr4.3:16923851-16923870 | MS.gene023338:CDS | 40.0% | |
| GCTGGCCAATTTGAATCTAA+AGG | + | chr4.3:16923869-16923888 | MS.gene023338:CDS | 40.0% | |
| GGATCATGTACTCTTGGATA+TGG | + | chr4.3:16924065-16924084 | MS.gene023338:CDS | 40.0% | |
| GGGGGAAACAACATCAAATA+TGG | - | chr4.3:16920541-16920560 | None:intergenic | 40.0% | |
| TAAAATAGTGCACCTTCAGG+AGG | + | chr4.3:16920021-16920040 | MS.gene023338:CDS | 40.0% | |
| TAAGGTCTCTTGTGAATGTG+TGG | + | chr4.3:16920950-16920969 | MS.gene023338:intron | 40.0% | |
| TACCCGATATCCACAAAACA+AGG | - | chr4.3:16920657-16920676 | None:intergenic | 40.0% | |
| TAGGTAGTAGAAAACCCACT+TGG | + | chr4.3:16922257-16922276 | MS.gene023338:intron | 40.0% | |
| TCACTTTCGTATTTGGAGGA+AGG | + | chr4.3:16920262-16920281 | MS.gene023338:CDS | 40.0% | |
| TCCTAAAATAGTGCACCTTC+AGG | + | chr4.3:16920018-16920037 | MS.gene023338:CDS | 40.0% | |
| TCGAAATATGCAAAGAACGG+CGG | - | chr4.3:16919965-16919984 | None:intergenic | 40.0% | |
| TGAAAACTGCTGAACTTGCA+GGG | - | chr4.3:16920929-16920948 | None:intergenic | 40.0% | |
| TGCCAAATGGAAACAATCGT+TGG | - | chr4.3:16921347-16921366 | None:intergenic | 40.0% | |
| TGTTGGGGTGGAATTGTAAA+AGG | + | chr4.3:16920388-16920407 | MS.gene023338:CDS | 40.0% | |
| TTACCGTAGTACAGACTTTG+AGG | + | chr4.3:16919853-16919872 | MS.gene023338:CDS | 40.0% | |
| TTCAAATGACAGGCAGAACT+TGG | + | chr4.3:16922173-16922192 | MS.gene023338:intron | 40.0% | |
| TTCCAAGCCTTGAAAAGACA+AGG | - | chr4.3:16922877-16922896 | None:intergenic | 40.0% | |
| TTCGTATTTGGAGGAAGGAA+GGG | + | chr4.3:16920267-16920286 | MS.gene023338:CDS | 40.0% | |
| TTTCGTATTTGGAGGAAGGA+AGG | + | chr4.3:16920266-16920285 | MS.gene023338:CDS | 40.0% | |
| TTTGTGGATATCGGGTATGT+CGG | + | chr4.3:16920660-16920679 | MS.gene023338:intron | 40.0% | |
| ! | AGTAATGTTTTGCATCCTCC+GGG | - | chr4.3:16923032-16923051 | None:intergenic | 40.0% |
| ! | ATACTGGGCCCCAAATTTTT+GGG | + | chr4.3:16921383-16921402 | MS.gene023338:CDS | 40.0% |
| ! | ATTCTCACCGGTGTCAATTT+AGG | + | chr4.3:16922342-16922361 | MS.gene023338:intron | 40.0% |
| ! | CAGAACTTGGTAGCTCAAAA+TGG | + | chr4.3:16922186-16922205 | MS.gene023338:intron | 40.0% |
| ! | GTCACCGATGCTTTTAATAG+TGG | + | chr4.3:16920189-16920208 | MS.gene023338:CDS | 40.0% |
| ! | TCAAAGTACCACTGTGAAAG+AGG | - | chr4.3:16919914-16919933 | None:intergenic | 40.0% |
| ! | TCTACCTCGGGTAAGTTTTA+CGG | + | chr4.3:16921527-16921546 | MS.gene023338:intron | 40.0% |
| ! | TTCAGCACAGTTTTACGACA+GGG | + | chr4.3:16923808-16923827 | MS.gene023338:CDS | 40.0% |
| ! | TTGTTGAGGCACTATTGTTG+GGG | + | chr4.3:16920373-16920392 | MS.gene023338:CDS | 40.0% |
| ! | TTTCAGCACAGTTTTACGAC+AGG | + | chr4.3:16923807-16923826 | MS.gene023338:CDS | 40.0% |
| !! | CAATCTGTATGACTTGGTCA+TGG | - | chr4.3:16921766-16921785 | None:intergenic | 40.0% |
| !! | GCAAAAGTTGATTTGGTCGT+TGG | + | chr4.3:16920159-16920178 | MS.gene023338:CDS | 40.0% |
| !! | GGTATTGATGTCTTGTGAAG+AGG | + | chr4.3:16923409-16923428 | MS.gene023338:intron | 40.0% |
| !! | TCCTGAAGGTGCACTATTTT+AGG | - | chr4.3:16920022-16920041 | None:intergenic | 40.0% |
| !!! | CCATTTTCTCCCTTGTTTTG+TGG | + | chr4.3:16920644-16920663 | MS.gene023338:intron | 40.0% |
| !!! | CTCCCTTGTTTTGTGGATAT+CGG | + | chr4.3:16920651-16920670 | MS.gene023338:intron | 40.0% |
| !!! | TCCCTTGTTTTGTGGATATC+GGG | + | chr4.3:16920652-16920671 | MS.gene023338:intron | 40.0% |
| ACCCGAGGTAGAACACTAAA+AGG | - | chr4.3:16921519-16921538 | None:intergenic | 45.0% | |
| AGCTTATCACCCAAAAGCAG+AGG | - | chr4.3:16924001-16924020 | None:intergenic | 45.0% | |
| AGGTAGAACACTAAAAGGGG+AGG | - | chr4.3:16921514-16921533 | None:intergenic | 45.0% | |
| AGTACCACTGTGAAAGAGGA+AGG | - | chr4.3:16919910-16919929 | None:intergenic | 45.0% | |
| AGTAGAAAACCCACTTGGGT+TGG | + | chr4.3:16922262-16922281 | MS.gene023338:intron | 45.0% | |
| AGTCTGTACTACGGTAAGAC+GGG | - | chr4.3:16919850-16919869 | None:intergenic | 45.0% | |
| AGTGCGGATGTGAGGAATAA+TGG | + | chr4.3:16923899-16923918 | MS.gene023338:CDS | 45.0% | |
| ATCTTGCTCATCAGAGCATG+TGG | - | chr4.3:16920696-16920715 | None:intergenic | 45.0% | |
| ATGACCGTAAAACTTACCCG+AGG | - | chr4.3:16921534-16921553 | None:intergenic | 45.0% | |
| ATGGAAAAACGGCCCAAATG+CGG | - | chr4.3:16920464-16920483 | None:intergenic | 45.0% | |
| ATTCCCTTCCTCTTTCACAG+TGG | + | chr4.3:16919903-16919922 | MS.gene023338:CDS | 45.0% | |
| CAGTGTTTGCATCCGCATTT+GGG | + | chr4.3:16920449-16920468 | MS.gene023338:CDS | 45.0% | |
| CCACCCAAAAAGAAAACCAC+AGG | - | chr4.3:16922947-16922966 | None:intergenic | 45.0% | |
| CCCGAGGTAGAACACTAAAA+GGG | - | chr4.3:16921518-16921537 | None:intergenic | 45.0% | |
| CCGAGGTAGAACACTAAAAG+GGG | - | chr4.3:16921517-16921536 | None:intergenic | 45.0% | |
| CGAAATATGCAAAGAACGGC+GGG | - | chr4.3:16919964-16919983 | None:intergenic | 45.0% | |
| CGATTGTTTCCATTTGGCAG+GGG | + | chr4.3:16921348-16921367 | MS.gene023338:CDS | 45.0% | |
| GATCTCTGTATACTGTGCTC+TGG | + | chr4.3:16924042-16924061 | MS.gene023338:CDS | 45.0% | |
| GATTGTTTCCATTTGGCAGG+GGG | + | chr4.3:16921349-16921368 | MS.gene023338:CDS | 45.0% | |
| GCACCTCAAAGTCTGTACTA+CGG | - | chr4.3:16919859-16919878 | None:intergenic | 45.0% | |
| GCCTTCCTACTCAGAAAACT+TGG | + | chr4.3:16921435-16921454 | MS.gene023338:CDS | 45.0% | |
| GCTTATCACCCAAAAGCAGA+GGG | - | chr4.3:16924000-16924019 | None:intergenic | 45.0% | |
| GGCCACAAAGGATTACTAGA+TGG | + | chr4.3:16922905-16922924 | MS.gene023338:CDS | 45.0% | |
| GTACCACTGTGAAAGAGGAA+GGG | - | chr4.3:16919909-16919928 | None:intergenic | 45.0% | |
| GTAGTTTAAGTGCGGATGTG+AGG | + | chr4.3:16923891-16923910 | MS.gene023338:CDS | 45.0% | |
| GTGAAAACTGCTGAACTTGC+AGG | - | chr4.3:16920930-16920949 | None:intergenic | 45.0% | |
| TACTACGGTAAGACGGGAAA+AGG | - | chr4.3:16919844-16919863 | None:intergenic | 45.0% | |
| TAGCGCACCTAAATTGACAC+CGG | - | chr4.3:16922352-16922371 | None:intergenic | 45.0% | |
| TCAAGGCTTGGAAGAATCCA+CGG | + | chr4.3:16922884-16922903 | MS.gene023338:CDS | 45.0% | |
| TCTCTGTATACTGTGCTCTG+GGG | + | chr4.3:16924044-16924063 | MS.gene023338:CDS | 45.0% | |
| ! | AGTCGACTCTTGATTATGGG+AGG | + | chr4.3:16920415-16920434 | MS.gene023338:CDS | 45.0% |
| ! | CATACTGGGCCCCAAATTTT+TGG | + | chr4.3:16921382-16921401 | MS.gene023338:CDS | 45.0% |
| ! | CCCAAGTTTTCTGAGTAGGA+AGG | - | chr4.3:16921439-16921458 | None:intergenic | 45.0% |
| ! | CCCCTTTTAGTGTTCTACCT+CGG | + | chr4.3:16921514-16921533 | MS.gene023338:CDS | 45.0% |
| ! | CCCTTTTAGTGTTCTACCTC+GGG | + | chr4.3:16921515-16921534 | MS.gene023338:CDS | 45.0% |
| ! | GAGGAAGGAAGGGATTTGTT+AGG | + | chr4.3:16920277-16920296 | MS.gene023338:CDS | 45.0% |
| ! | GTAATGTTTTGCATCCTCCG+GGG | - | chr4.3:16923031-16923050 | None:intergenic | 45.0% |
| ! | TCGCAACTGAGCTTGATAAC+TGG | + | chr4.3:16922718-16922737 | MS.gene023338:intron | 45.0% |
| !! | AACCACCAGAGAGTCGTTTT+CGG | - | chr4.3:16919791-16919810 | None:intergenic | 45.0% |
| !! | CACTCCATTTTGATGTGGTC+TGG | + | chr4.3:16923782-16923801 | MS.gene023338:CDS | 45.0% |
| !! | CCTGTGGTTTTCTTTTTGGG+TGG | + | chr4.3:16922944-16922963 | MS.gene023338:CDS | 45.0% |
| !! | CTCCTTGTCTTTTCAAGGCT+TGG | + | chr4.3:16922872-16922891 | MS.gene023338:CDS | 45.0% |
| !! | GAAGGAAGGGATTTGTTAGG+TGG | + | chr4.3:16920280-16920299 | MS.gene023338:CDS | 45.0% |
| !!! | TTTGGGCCGTTTTTCCATCT+TGG | + | chr4.3:16920466-16920485 | MS.gene023338:CDS | 45.0% |
| ATCTCGGAAGTCACAACAGC+TGG | - | chr4.3:16922683-16922702 | None:intergenic | 50.0% | |
| ATCTCGGAAGTTGCAACAGC+TGG | - | chr4.3:16922449-16922468 | None:intergenic | 50.0% | |
| CAGCAGCTTCATTCACTGCA+GGG | + | chr4.3:16921475-16921494 | MS.gene023338:CDS | 50.0% | |
| CGCACATGAGCATGCAAAGT+CGG | - | chr4.3:16921184-16921203 | None:intergenic | 50.0% | |
| CTAGTAATCCTTTGTGGCCG+TGG | - | chr4.3:16922904-16922923 | None:intergenic | 50.0% | |
| CTTTGTTGCAGCACAAACCC+CGG | + | chr4.3:16923011-16923030 | MS.gene023338:CDS | 50.0% | |
| GCAGTGTTTGCATCCGCATT+TGG | + | chr4.3:16920448-16920467 | MS.gene023338:CDS | 50.0% | |
| GGTAGCTCAAAATGAGCACC+AGG | + | chr4.3:16922567-16922586 | MS.gene023338:intron | 50.0% | |
| GTCTCAGGTTCGATTCTCAC+CGG | + | chr4.3:16922330-16922349 | MS.gene023338:intron | 50.0% | |
| GTGTCAATGCCAGCCAATTG+CGG | - | chr4.3:16919883-16919902 | None:intergenic | 50.0% | |
| TGAATGAAGCTGCTGGTGTC+TGG | - | chr4.3:16921470-16921489 | None:intergenic | 50.0% | |
| TTGCTCATCAGAGCATGTGG+AGG | - | chr4.3:16920693-16920712 | None:intergenic | 50.0% | |
| ! | AATTTGGGGCCCAGTATGCA+TGG | - | chr4.3:16921380-16921399 | None:intergenic | 50.0% |
| ! | CAACATCTCAGGCGTTGCAA+TGG | - | chr4.3:16922015-16922034 | None:intergenic | 50.0% |
| ! | CTCTGGGGATCATGTACTCT+TGG | + | chr4.3:16924059-16924078 | MS.gene023338:CDS | 50.0% |
| ! | GTAATCTAGAGTCCACGGAC+TGG | - | chr4.3:16919942-16919961 | None:intergenic | 50.0% |
| ! | TCATTCACTGCAGGGCTAGT+AGG | + | chr4.3:16921483-16921502 | MS.gene023338:CDS | 50.0% |
| ! | TTGAGGCACTATTGTTGGGG+TGG | + | chr4.3:16920376-16920395 | MS.gene023338:CDS | 50.0% |
| !! | ACCACCAGAGAGTCGTTTTC+GGG | - | chr4.3:16919790-16919809 | None:intergenic | 50.0% |
| !! | ACTTTGAGGTGCACCGCAAT+TGG | + | chr4.3:16919867-16919886 | MS.gene023338:CDS | 50.0% |
| !! | TGGCCTAGTGGTATTGGCTT+GGG | + | chr4.3:16922282-16922301 | MS.gene023338:intron | 50.0% |
| !! | TTGGCCTAGTGGTATTGGCT+TGG | + | chr4.3:16922281-16922300 | MS.gene023338:intron | 50.0% |
| !! | TTGGGTTGGCCTAGTGGTAT+TGG | + | chr4.3:16922276-16922295 | MS.gene023338:intron | 50.0% |
| !!! | GCCGTTTTTCCATCTTGGAC+AGG | + | chr4.3:16920471-16920490 | MS.gene023338:CDS | 50.0% |
| ACCACTAGGCCAACCCAAGT+GGG | - | chr4.3:16922274-16922293 | None:intergenic | 55.0% | |
| ACTTTGACGAGACCAGTCCG+TGG | + | chr4.3:16919927-16919946 | MS.gene023338:CDS | 55.0% | |
| CCAGCAGCTTCATTCACTGC+AGG | + | chr4.3:16921474-16921493 | MS.gene023338:CDS | 55.0% | |
| CCTGCAGTGAATGAAGCTGC+TGG | - | chr4.3:16921477-16921496 | None:intergenic | 55.0% | |
| CGGGGTTTGTGCTGCAACAA+AGG | - | chr4.3:16923013-16923032 | None:intergenic | 55.0% | |
| GAATCGAACCTGAGACCTCG+AGG | - | chr4.3:16922326-16922345 | None:intergenic | 55.0% | |
| GGAAGAATCCACGGCCACAA+AGG | + | chr4.3:16922893-16922912 | MS.gene023338:CDS | 55.0% | |
| GGGGCTTTGCCATGCATACT+GGG | + | chr4.3:16921368-16921387 | MS.gene023338:CDS | 55.0% | |
| GGTAGCTCAAAATGGGCACC+AGG | + | chr4.3:16922194-16922213 | MS.gene023338:intron | 55.0% | |
| GGTCCCAAGCCAATACCACT+AGG | - | chr4.3:16922288-16922307 | None:intergenic | 55.0% | |
| GTAGCCCGAAAACGACTCTC+TGG | + | chr4.3:16919783-16919802 | MS.gene023338:CDS | 55.0% | |
| TACCACTAGGCCAACCCAAG+TGG | - | chr4.3:16922275-16922294 | None:intergenic | 55.0% | |
| TGGGTGGCATGTGCATGAGA+AGG | + | chr4.3:16922960-16922979 | MS.gene023338:CDS | 55.0% | |
| TGTGCTGCAACAAAGGCGAG+TGG | - | chr4.3:16923006-16923025 | None:intergenic | 55.0% | |
| ! | CTGCAACCGAGCTTGATGAC+TGG | + | chr4.3:16922484-16922503 | MS.gene023338:intron | 55.0% |
| ! | GGCGGGTAATCTAGAGTCCA+CGG | - | chr4.3:16919947-16919966 | None:intergenic | 55.0% |
| !! | AGTGGTATTGGCTTGGGACC+TGG | + | chr4.3:16922288-16922307 | MS.gene023338:intron | 55.0% |
| !! | GTGGTATTGGCTTGGGACCT+GGG | + | chr4.3:16922289-16922308 | MS.gene023338:intron | 55.0% |
| GCCCGAAAACGACTCTCTGG+TGG | + | chr4.3:16919786-16919805 | MS.gene023338:CDS | 60.0% | |
| GGGGGCTTTGCCATGCATAC+TGG | + | chr4.3:16921367-16921386 | MS.gene023338:CDS | 60.0% | |
| GTCACATCGCAGCCGAGAGT+TGG | + | chr4.3:16921881-16921900 | MS.gene023338:intron | 60.0% | |
| TCGAACCTGAGACCTCGAGG+AGG | - | chr4.3:16922323-16922342 | None:intergenic | 60.0% | |
| TGAGGTGCACCGCAATTGGC+TGG | + | chr4.3:16919871-16919890 | MS.gene023338:CDS | 60.0% | |
| TGGCAAAGCCCCCTGCCAAA+TGG | - | chr4.3:16921360-16921379 | None:intergenic | 60.0% | |
| TGTTGCAGCACAAACCCCGG+AGG | + | chr4.3:16923014-16923033 | MS.gene023338:CDS | 60.0% | |
| !! | ACCCACTTGGGTTGGCCTAG+TGG | + | chr4.3:16922270-16922289 | MS.gene023338:intron | 60.0% |
| GTGCTCCTCCTCGAGGTCTC+AGG | + | chr4.3:16922315-16922334 | MS.gene023338:intron | 65.0% | |
| ! | TCGAGGAGGAGCACACTCCC+AGG | - | chr4.3:16922309-16922328 | None:intergenic | 65.0% |
| ! | TGGGAGTGTGCTCCTCCTCG+AGG | + | chr4.3:16922308-16922327 | MS.gene023338:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 16919740 | 16924117 | 16919740 | ID=MS.gene023338 |
| chr4.3 | mRNA | 16919740 | 16924117 | 16919740 | ID=MS.gene023338.t1;Parent=MS.gene023338 |
| chr4.3 | exon | 16919740 | 16920492 | 16919740 | ID=MS.gene023338.t1.exon1;Parent=MS.gene023338.t1 |
| chr4.3 | CDS | 16919740 | 16920492 | 16919740 | ID=cds.MS.gene023338.t1;Parent=MS.gene023338.t1 |
| chr4.3 | exon | 16921330 | 16921536 | 16921330 | ID=MS.gene023338.t1.exon2;Parent=MS.gene023338.t1 |
| chr4.3 | CDS | 16921330 | 16921536 | 16921330 | ID=cds.MS.gene023338.t1;Parent=MS.gene023338.t1 |
| chr4.3 | exon | 16922829 | 16923066 | 16922829 | ID=MS.gene023338.t1.exon3;Parent=MS.gene023338.t1 |
| chr4.3 | CDS | 16922829 | 16923066 | 16922829 | ID=cds.MS.gene023338.t1;Parent=MS.gene023338.t1 |
| chr4.3 | exon | 16923708 | 16924117 | 16923708 | ID=MS.gene023338.t1.exon4;Parent=MS.gene023338.t1 |
| chr4.3 | CDS | 16923708 | 16924117 | 16923708 | ID=cds.MS.gene023338.t1;Parent=MS.gene023338.t1 |
| Gene Sequence |
| Protein sequence |
