Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene032882.t1 | XP_003613744.1 | 97.5 | 243 | 6 | 0 | 52 | 294 | 21 | 263 | 1.10E-133 | 486.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene032882.t1 | Q8VYI1 | 79.0 | 243 | 50 | 1 | 52 | 294 | 19 | 260 | 5.2e-111 | 402.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene032882.t1 | B7FLU5 | 97.5 | 243 | 6 | 0 | 52 | 294 | 21 | 263 | 8.2e-134 | 486.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene032882 | MS.gene02757 | PPI |
| MS.gene68324 | MS.gene032882 | PPI |
| MS.gene032882 | MS.gene070560 | PPI |
| MS.gene032882 | MS.gene02144 | PPI |
| MS.gene032882 | MS.gene08289 | PPI |
| MS.gene003352 | MS.gene032882 | PPI |
| MS.gene032882 | MS.gene027563 | PPI |
| MS.gene55207 | MS.gene032882 | PPI |
| MS.gene032882 | MS.gene77418 | PPI |
| MS.gene34901 | MS.gene032882 | PPI |
| MS.gene023338 | MS.gene032882 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene032882.t1 | MTR_5g040320 | 97.531 | 243 | 6 | 0 | 52 | 294 | 21 | 263 | 1.16e-180 | 498 |
| MS.gene032882.t1 | MTR_1g097310 | 66.807 | 238 | 76 | 2 | 52 | 289 | 20 | 254 | 3.30e-117 | 337 |
| MS.gene032882.t1 | MTR_1g097320 | 63.704 | 135 | 49 | 0 | 107 | 241 | 1 | 135 | 2.51e-60 | 189 |
| MS.gene032882.t1 | MTR_8g063210 | 25.097 | 259 | 165 | 10 | 33 | 273 | 4 | 251 | 2.32e-13 | 68.9 |
| MS.gene032882.t1 | MTR_6g039970 | 27.317 | 205 | 137 | 7 | 69 | 269 | 51 | 247 | 2.58e-13 | 68.9 |
| MS.gene032882.t1 | MTR_5g035190 | 28.125 | 224 | 142 | 9 | 69 | 284 | 51 | 263 | 1.00e-12 | 67.4 |
| MS.gene032882.t1 | MTR_5g035190 | 29.557 | 203 | 127 | 8 | 90 | 284 | 15 | 209 | 1.34e-12 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene032882.t1 | AT1G14290 | 76.955 | 243 | 55 | 1 | 52 | 294 | 18 | 259 | 6.81e-145 | 407 |
| MS.gene032882.t1 | AT1G69640 | 79.012 | 243 | 50 | 1 | 52 | 294 | 19 | 260 | 7.82e-136 | 385 |
| MS.gene032882.t1 | AT1G14290 | 82.065 | 184 | 33 | 0 | 111 | 294 | 2 | 185 | 6.32e-116 | 332 |
| MS.gene032882.t1 | AT2G29390 | 26.818 | 220 | 135 | 8 | 67 | 269 | 49 | 259 | 5.62e-12 | 65.1 |
Find 60 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGATGAGGATGAAAAGAATT+TGG | 0.229606 | 5.4:+30041366 | MS.gene032882:CDS |
| TCTAAGTTTGATGTTGTTAA+AGG | 0.231277 | 5.4:+30041391 | MS.gene032882:CDS |
| TTAGTTTATTGGATTTATTC+TGG | 0.243045 | 5.4:+30041289 | MS.gene032882:intron |
| TCTGAAGGACGAGGAGTTAA+TGG | 0.259326 | 5.4:+30039111 | MS.gene032882:CDS |
| GATTGTTTGCTGAAGATTAT+AGG | 0.295856 | 5.4:+30041329 | MS.gene032882:CDS |
| CTCATTGTACCCTATTCATT+TGG | 0.300726 | 5.4:+30042895 | MS.gene032882:CDS |
| CCCTTTCGTAAGCTCATAGA+AGG | 0.340750 | 5.4:+30039142 | MS.gene032882:CDS |
| CGCAACCGTTCTTTGTTATG+TGG | 0.347193 | 5.4:+30043160 | MS.gene032882:CDS |
| TGGATGATCACTGTGGTTTA+TGG | 0.355678 | 5.4:+30043046 | MS.gene032882:CDS |
| GCTCTCTTCTCTAATGAGTA+TGG | 0.377222 | 5.4:-30043207 | None:intergenic |
| TTACATGGTCCTCAACCTTA+AGG | 0.380493 | 5.4:+30039174 | MS.gene032882:CDS |
| GTATAGAGCTCCAAATGAAT+AGG | 0.386213 | 5.4:-30042905 | None:intergenic |
| TGTTATGTGGGACAAAATCC+TGG | 0.403827 | 5.4:+30043173 | MS.gene032882:CDS |
| TATTACTGCAATGTTGGTAA+TGG | 0.409424 | 5.4:+30042792 | MS.gene032882:CDS |
| TATTCTCATTGGTACTACTT+TGG | 0.419651 | 5.4:-30042741 | None:intergenic |
| ACAATTTATTACTGCAATGT+TGG | 0.438454 | 5.4:+30042786 | MS.gene032882:CDS |
| GATGTACATCATCAACTATA+TGG | 0.447186 | 5.4:+30043120 | MS.gene032882:CDS |
| CACTGTGGTTTATGGCTCCC+GGG | 0.448167 | 5.4:+30043054 | MS.gene032882:CDS |
| TATAGAGCTCCAAATGAATA+GGG | 0.457129 | 5.4:-30042904 | None:intergenic |
| ATCACACGGGTATCAACAAT+TGG | 0.461030 | 5.4:+30039065 | MS.gene032882:CDS |
| TCACTGTGGTTTATGGCTCC+CGG | 0.473746 | 5.4:+30043053 | MS.gene032882:CDS |
| CACGCCAACGTAGATCCTTA+AGG | 0.476732 | 5.4:-30039189 | None:intergenic |
| AAGAGTGAATGTGTTTGTAT+AGG | 0.481896 | 5.4:-30042861 | None:intergenic |
| TCATCCTTGTAAGCTTTACA+AGG | 0.507323 | 5.4:-30043252 | None:intergenic |
| AACATATGGAATAGGTTCCC+CGG | 0.508139 | 5.4:-30043072 | None:intergenic |
| TTTCAAAGAGATTTATCTGA+AGG | 0.515238 | 5.4:+30039096 | MS.gene032882:CDS |
| AAGGAGAGAAGTATTCTCAT+TGG | 0.524581 | 5.4:-30042752 | None:intergenic |
| GCAACCGTTCTTTGTTATGT+GGG | 0.527794 | 5.4:+30043161 | MS.gene032882:CDS |
| TAGACCTTGTAAAGCTTACA+AGG | 0.530647 | 5.4:+30043248 | MS.gene032882:CDS |
| AGAAGGGTTCGAGCTTTACA+TGG | 0.533004 | 5.4:+30039159 | MS.gene032882:CDS |
| AAAACTTACTGCAAACAAAA+GGG | 0.533273 | 5.4:-30041452 | None:intergenic |
| GTCGTTAAGAAGCCCCTCGA+TGG | 0.546173 | 5.4:-30042935 | None:intergenic |
| CTCGAGGACTCATACCAGAT+AGG | 0.552424 | 5.4:-30042984 | None:intergenic |
| CTCTAATGAGTATGGCATGT+AGG | 0.553171 | 5.4:-30043199 | None:intergenic |
| GGGCTTCTTAACGACACAAT+CGG | 0.557579 | 5.4:+30042943 | MS.gene032882:CDS |
| CTATACAATCATCCCATCGA+GGG | 0.559905 | 5.4:+30042922 | MS.gene032882:CDS |
| TTGTCCCACATAACAAAGAA+CGG | 0.560325 | 5.4:-30043165 | None:intergenic |
| ACATATGGAATAGGTTCCCC+GGG | 0.564382 | 5.4:-30043071 | None:intergenic |
| CCCTTCTATGAGCTTACGAA+AGG | 0.565778 | 5.4:-30039143 | None:intergenic |
| AACGTAGATCCTTAAGGTTG+AGG | 0.583280 | 5.4:-30039183 | None:intergenic |
| GTTATGTGGGACAAAATCCT+GGG | 0.587255 | 5.4:+30043174 | MS.gene032882:CDS |
| TCATTAGAGAAGAGAGCTAG+TGG | 0.591020 | 5.4:+30043213 | MS.gene032882:CDS |
| TCGTTAAGAAGCCCCTCGAT+GGG | 0.595489 | 5.4:-30042934 | None:intergenic |
| CCTTCTATGAGCTTACGAAA+GGG | 0.601990 | 5.4:-30039142 | None:intergenic |
| CAATGTTGGTAATGGACACA+TGG | 0.623258 | 5.4:+30042800 | MS.gene032882:CDS |
| TAAATTGTCTTGCTAAAACA+AGG | 0.626413 | 5.4:-30042771 | None:intergenic |
| CTTTGCCACCATTAAAACCG+TGG | 0.628473 | 5.4:+30043026 | MS.gene032882:CDS |
| AGTATGGCATGTAGGTACCC+AGG | 0.637567 | 5.4:-30043191 | None:intergenic |
| CCTTTCGTAAGCTCATAGAA+GGG | 0.645086 | 5.4:+30039143 | MS.gene032882:CDS |
| GTTACATACAAAGAAAGATG+AGG | 0.653839 | 5.4:+30041351 | MS.gene032882:CDS |
| ACTGTGGTTTATGGCTCCCG+GGG | 0.671320 | 5.4:+30043055 | MS.gene032882:CDS |
| TAAACCACAGTGATCATCCA+CGG | 0.672027 | 5.4:-30043043 | None:intergenic |
| AGAGATTTATCTGAAGGACG+AGG | 0.674682 | 5.4:+30039102 | MS.gene032882:CDS |
| TTAGAGAAGAGAGCTAGTGG+TGG | 0.681078 | 5.4:+30043216 | MS.gene032882:CDS |
| TATACAATCATCCCATCGAG+GGG | 0.693015 | 5.4:+30042923 | MS.gene032882:CDS |
| TCTATACAATCATCCCATCG+AGG | 0.703494 | 5.4:+30042921 | MS.gene032882:CDS |
| TCAACCTTAAGGATCTACGT+TGG | 0.736729 | 5.4:+30039185 | MS.gene032882:CDS |
| CTTCTTAACGACACAATCGG+CGG | 0.737880 | 5.4:+30042946 | MS.gene032882:CDS |
| ATAGTTGATGATGTACATCG+TGG | 0.765196 | 5.4:-30043116 | None:intergenic |
| AAAACCGTGGATGATCACTG+TGG | 0.771335 | 5.4:+30043039 | MS.gene032882:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGTATCATCAATATAAAAA+GGG | - | chr5.4:30040498-30040517 | None:intergenic | 15.0% |
| !! | GTTATTTATAAATCAAATCA+AGG | + | chr5.4:30041170-30041189 | MS.gene032882:intron | 15.0% |
| !! | TATGTATCATCAATATAAAA+AGG | - | chr5.4:30040499-30040518 | None:intergenic | 15.0% |
| !! | TGTATAACATATAACAATTA+AGG | - | chr5.4:30042101-30042120 | None:intergenic | 15.0% |
| !!! | AATTGTTATTGAAAAACATA+TGG | - | chr5.4:30043089-30043108 | None:intergenic | 15.0% |
| !!! | CTTATTTCTTTGTTTTAAAT+CGG | - | chr5.4:30040688-30040707 | None:intergenic | 15.0% |
| !!! | TAGAAAACATTATTTTTGTT+CGG | - | chr5.4:30040563-30040582 | None:intergenic | 15.0% |
| !!! | TATCTTTCTAATTTTTGAAA+CGG | - | chr5.4:30042213-30042232 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTGTTTGTAGA+GGG | + | chr5.4:30041507-30041526 | MS.gene032882:intron | 15.0% |
| !!! | TTTTTTTTTTTTGTTTGTAG+AGG | + | chr5.4:30041506-30041525 | MS.gene032882:intron | 15.0% |
| !! | AATTTGTCATCTTCTATTAA+TGG | + | chr5.4:30040248-30040267 | MS.gene032882:intron | 20.0% |
| !! | ACAAAAAATACAAGATTTGT+TGG | + | chr5.4:30040751-30040770 | MS.gene032882:intron | 20.0% |
| !! | AGAGAAAAATTTCAATTTCA+AGG | + | chr5.4:30041068-30041087 | MS.gene032882:intron | 20.0% |
| !! | ATAATAAACCTATCATGATT+CGG | - | chr5.4:30040011-30040030 | None:intergenic | 20.0% |
| !! | CTATAACTATAACTAAAATG+TGG | + | chr5.4:30042679-30042698 | MS.gene032882:intron | 20.0% |
| !! | GAGAAAAATTTCAATTTCAA+GGG | + | chr5.4:30041069-30041088 | MS.gene032882:intron | 20.0% |
| !! | GATTAATGAATTGATCTATT+TGG | + | chr5.4:30041712-30041731 | MS.gene032882:intron | 20.0% |
| !! | TAAATCCAATAAACTAAAAG+TGG | - | chr5.4:30041286-30041305 | None:intergenic | 20.0% |
| !! | TATTATTTAACAAAAACCTG+AGG | - | chr5.4:30040534-30040553 | None:intergenic | 20.0% |
| !! | TATTGAAAAACATATGGAAT+AGG | - | chr5.4:30043083-30043102 | None:intergenic | 20.0% |
| !! | TTAAAGTTTAATTGATCACT+CGG | - | chr5.4:30040719-30040738 | None:intergenic | 20.0% |
| !! | TTAGTTTATTGGATTTATTC+TGG | + | chr5.4:30041289-30041308 | MS.gene032882:intron | 20.0% |
| !!! | AAAGATTTGATTTTTTCATC+TGG | + | chr5.4:30041195-30041214 | MS.gene032882:intron | 20.0% |
| !!! | AAGATTTGATTTTTTCATCT+GGG | + | chr5.4:30041196-30041215 | MS.gene032882:intron | 20.0% |
| !!! | CAAAAAATACAAGATTTGTT+GGG | + | chr5.4:30040752-30040771 | MS.gene032882:intron | 20.0% |
| !!! | TTTTGTTATGGTTTTAGTTT+TGG | - | chr5.4:30039717-30039736 | None:intergenic | 20.0% |
| ! | AAAAACTTACTGCAAACAAA+AGG | - | chr5.4:30041456-30041475 | None:intergenic | 25.0% |
| ! | AAAACTTACTGCAAACAAAA+GGG | - | chr5.4:30041455-30041474 | None:intergenic | 25.0% |
| ! | AAACATAGTATTTGCAAAAG+AGG | - | chr5.4:30041827-30041846 | None:intergenic | 25.0% |
| ! | AAATTTCAATTTCAAGGGTT+AGG | + | chr5.4:30041074-30041093 | MS.gene032882:intron | 25.0% |
| ! | AACATAGTATTTGCAAAAGA+GGG | - | chr5.4:30041826-30041845 | None:intergenic | 25.0% |
| ! | AACTATAACTAAAATGTGGT+TGG | + | chr5.4:30042683-30042702 | MS.gene032882:intron | 25.0% |
| ! | AATTAATGAATCTCTTGAGT+TGG | + | chr5.4:30041960-30041979 | MS.gene032882:intron | 25.0% |
| ! | AATTTCAATTTCAAGGGTTA+GGG | + | chr5.4:30041075-30041094 | MS.gene032882:intron | 25.0% |
| ! | ACAATTTATTACTGCAATGT+TGG | + | chr5.4:30042786-30042805 | MS.gene032882:CDS | 25.0% |
| ! | ACTATAACTAAAATGTGGTT+GGG | + | chr5.4:30042684-30042703 | MS.gene032882:intron | 25.0% |
| ! | AGGGAATTAAATATTGGATT+AGG | - | chr5.4:30040983-30041002 | None:intergenic | 25.0% |
| ! | AGTAAAATCCATACAAGATT+TGG | - | chr5.4:30042316-30042335 | None:intergenic | 25.0% |
| ! | ATAACAAAACCACTTTAGTT+TGG | + | chr5.4:30039728-30039747 | MS.gene032882:intron | 25.0% |
| ! | ATATTTAATTCCCTTCTCAT+TGG | + | chr5.4:30040989-30041008 | MS.gene032882:intron | 25.0% |
| ! | ATGAGAAGGGAATTAAATAT+TGG | - | chr5.4:30040989-30041008 | None:intergenic | 25.0% |
| ! | CTGAAATTGATGCAAATATT+GGG | + | chr5.4:30041139-30041158 | MS.gene032882:intron | 25.0% |
| ! | CTTAAAAGTCAACACATAAA+GGG | - | chr5.4:30041739-30041758 | None:intergenic | 25.0% |
| ! | TAAATTGTCTTGCTAAAACA+AGG | - | chr5.4:30042774-30042793 | None:intergenic | 25.0% |
| ! | TCTAAGTTTGATGTTGTTAA+AGG | + | chr5.4:30041391-30041410 | MS.gene032882:CDS | 25.0% |
| ! | TTTCAAAGAGATTTATCTGA+AGG | + | chr5.4:30039096-30039115 | MS.gene032882:CDS | 25.0% |
| !! | AAAAAGCATGTGAGAATTAA+GGG | - | chr5.4:30040343-30040362 | None:intergenic | 25.0% |
| !! | AACCACTATTTTCAATGATA+CGG | + | chr5.4:30042570-30042589 | MS.gene032882:intron | 25.0% |
| !! | AATTAAGTTGCAATTGTATC+TGG | + | chr5.4:30042532-30042551 | MS.gene032882:intron | 25.0% |
| !! | ATCAGAGACATTTTACAATA+TGG | + | chr5.4:30040149-30040168 | MS.gene032882:intron | 25.0% |
| !! | ATCTTGTATGGATTTTACTT+TGG | + | chr5.4:30042317-30042336 | MS.gene032882:intron | 25.0% |
| !! | CTAATTTTACCATTAGCATT+TGG | - | chr5.4:30039912-30039931 | None:intergenic | 25.0% |
| !! | TAAAAAGCATGTGAGAATTA+AGG | - | chr5.4:30040344-30040363 | None:intergenic | 25.0% |
| !! | TCTGAAATTGATGCAAATAT+TGG | + | chr5.4:30041138-30041157 | MS.gene032882:intron | 25.0% |
| !! | TTCATCCTTTTATGGTAATA+TGG | - | chr5.4:30040439-30040458 | None:intergenic | 25.0% |
| !!! | AAACTAAAGTGGTTTTGTTA+TGG | - | chr5.4:30039729-30039748 | None:intergenic | 25.0% |
| !!! | CTACTTTTATTTCCTTGTAA+TGG | + | chr5.4:30039949-30039968 | MS.gene032882:intron | 25.0% |
| !!! | GATAAGGTTTTGTTTCTATT+TGG | + | chr5.4:30041925-30041944 | MS.gene032882:intron | 25.0% |
| !!! | TCTGGTTTTTATGTTGTTTT+GGG | + | chr5.4:30041307-30041326 | MS.gene032882:CDS | 25.0% |
| !!! | TTCTGGTTTTTATGTTGTTT+TGG | + | chr5.4:30041306-30041325 | MS.gene032882:CDS | 25.0% |
| !!! | TTGAAAATTGTTTTGTTTGC+AGG | - | chr5.4:30040901-30040920 | None:intergenic | 25.0% |
| AAAAAAGAGGATACATCATG+TGG | - | chr5.4:30039303-30039322 | None:intergenic | 30.0% | |
| AAACATATCATGCTGAGTAT+TGG | - | chr5.4:30039872-30039891 | None:intergenic | 30.0% | |
| AACATATCATGCTGAGTATT+GGG | - | chr5.4:30039871-30039890 | None:intergenic | 30.0% | |
| AAGAGTGAATGTGTTTGTAT+AGG | - | chr5.4:30042864-30042883 | None:intergenic | 30.0% | |
| AATCACTACAATTCTCACAT+AGG | + | chr5.4:30040214-30040233 | MS.gene032882:intron | 30.0% | |
| AATGAAGTTGTGATTGTATC+TGG | + | chr5.4:30042652-30042671 | MS.gene032882:intron | 30.0% | |
| AGATGAGGATGAAAAGAATT+TGG | + | chr5.4:30041366-30041385 | MS.gene032882:CDS | 30.0% | |
| ATATAACACAATTGCAGACT+TGG | + | chr5.4:30042162-30042181 | MS.gene032882:intron | 30.0% | |
| CAGAATCTACAACAGTAAAA+AGG | - | chr5.4:30041906-30041925 | None:intergenic | 30.0% | |
| CCATTAACATGTTGAGTATT+GGG | - | chr5.4:30039985-30040004 | None:intergenic | 30.0% | |
| CCTTAAAAGTCAACACATAA+AGG | - | chr5.4:30041740-30041759 | None:intergenic | 30.0% | |
| CTACTAGTAATTCATAAGTC+CGG | - | chr5.4:30041637-30041656 | None:intergenic | 30.0% | |
| GATGTACATCATCAACTATA+TGG | + | chr5.4:30043120-30043139 | MS.gene032882:CDS | 30.0% | |
| GTTACATACAAAGAAAGATG+AGG | + | chr5.4:30041351-30041370 | MS.gene032882:CDS | 30.0% | |
| GTTGTTCATCTCATCTAAAA+AGG | - | chr5.4:30039337-30039356 | None:intergenic | 30.0% | |
| TACGCAATTGAAATTACTAG+TGG | - | chr5.4:30040291-30040310 | None:intergenic | 30.0% | |
| TACTAGTAATTCATAAGTCC+GGG | - | chr5.4:30041636-30041655 | None:intergenic | 30.0% | |
| TACTGTTGTAGATTCTGATA+AGG | + | chr5.4:30041909-30041928 | MS.gene032882:intron | 30.0% | |
| TATAACACAATTGCAGACTT+GGG | + | chr5.4:30042163-30042182 | MS.gene032882:intron | 30.0% | |
| TATAGAGCTCCAAATGAATA+GGG | - | chr5.4:30042907-30042926 | None:intergenic | 30.0% | |
| TATCTTAGGCTACATCAAAA+TGG | + | chr5.4:30042030-30042049 | MS.gene032882:intron | 30.0% | |
| TATTCTCATTGGTACTACTT+TGG | - | chr5.4:30042744-30042763 | None:intergenic | 30.0% | |
| TGAATTCATCCAAACTAAAG+TGG | - | chr5.4:30039740-30039759 | None:intergenic | 30.0% | |
| TTATGAGGCTTGGAAATATT+TGG | + | chr5.4:30040413-30040432 | MS.gene032882:intron | 30.0% | |
| TTTGGCCATATTACCATAAA+AGG | + | chr5.4:30040431-30040450 | MS.gene032882:intron | 30.0% | |
| ! | AAAAGCATGTGAGAATTAAG+GGG | - | chr5.4:30040342-30040361 | None:intergenic | 30.0% |
| ! | AAGTTTCTTTTACGCAAGAA+AGG | + | chr5.4:30042129-30042148 | MS.gene032882:intron | 30.0% |
| ! | ACCACTATTTTCAATGATAC+GGG | + | chr5.4:30042571-30042590 | MS.gene032882:intron | 30.0% |
| ! | GATTGTTTGCTGAAGATTAT+AGG | + | chr5.4:30041329-30041348 | MS.gene032882:CDS | 30.0% |
| ! | TATTACTGCAATGTTGGTAA+TGG | + | chr5.4:30042792-30042811 | MS.gene032882:CDS | 30.0% |
| ! | TGATTTTATATTGCCTAAGC+TGG | + | chr5.4:30041672-30041691 | MS.gene032882:intron | 30.0% |
| ! | TGCGTATTTTCTCACAAAAA+TGG | + | chr5.4:30040305-30040324 | MS.gene032882:intron | 30.0% |
| !! | ACTTTAGTTTGGATGAATTC+AGG | + | chr5.4:30039739-30039758 | MS.gene032882:intron | 30.0% |
| !! | ATGCAAATATTGGGTTTTGT+GGG | + | chr5.4:30041148-30041167 | MS.gene032882:intron | 30.0% |
| !! | TAGATACTATAGTGGGTTAT+AGG | + | chr5.4:30042071-30042090 | MS.gene032882:intron | 30.0% |
| !!! | AAATGTGTTGGTTTTTGGTA+GGG | + | chr5.4:30039643-30039662 | MS.gene032882:intron | 30.0% |
| !!! | AGATTAGGTCTTTTAGGTTA+CGG | - | chr5.4:30039840-30039859 | None:intergenic | 30.0% |
| !!! | CCTTTATGTGTTGACTTTTA+AGG | + | chr5.4:30041737-30041756 | MS.gene032882:intron | 30.0% |
| !!! | GTTATGGTTTTAGTTTTGGT+TGG | - | chr5.4:30039713-30039732 | None:intergenic | 30.0% |
| !!! | TTGCAGTAAGTTTTTTGTGA+TGG | + | chr5.4:30041461-30041480 | MS.gene032882:intron | 30.0% |
| !!! | TTGCTCCACTTTTAGTTTAT+TGG | + | chr5.4:30041278-30041297 | MS.gene032882:intron | 30.0% |
| !!! | TTGGGTTTTTGTTTTTGTGT+AGG | + | chr5.4:30042702-30042721 | MS.gene032882:intron | 30.0% |
| !!! | TTTTTTGTTTGTAGAGGGAT+TGG | + | chr5.4:30041512-30041531 | MS.gene032882:intron | 30.0% |
| AAAACCTAAAGCCAATGAGA+AGG | - | chr5.4:30041003-30041022 | None:intergenic | 35.0% | |
| AAACCTAAAGCCAATGAGAA+GGG | - | chr5.4:30041002-30041021 | None:intergenic | 35.0% | |
| AACAAAAACCTGAGGTCAAA+TGG | - | chr5.4:30040526-30040545 | None:intergenic | 35.0% | |
| AACACATTTGGAAGCAAGAA+AGG | - | chr5.4:30039632-30039651 | None:intergenic | 35.0% | |
| AAGAAAAAAATGGATGCTCG+AGG | - | chr5.4:30043003-30043022 | None:intergenic | 35.0% | |
| AATAATGTGCTTCCCTAAAG+GGG | + | chr5.4:30039360-30039379 | MS.gene032882:intron | 35.0% | |
| ACAAACTGAACTAAATCGCT+CGG | - | chr5.4:30039780-30039799 | None:intergenic | 35.0% | |
| ACCCGTATCATTGAAAATAG+TGG | - | chr5.4:30042575-30042594 | None:intergenic | 35.0% | |
| AGACAAGTCAATGTTTGCAA+CGG | - | chr5.4:30042245-30042264 | None:intergenic | 35.0% | |
| AGACATCTTATGATTGAGGA+TGG | + | chr5.4:30039560-30039579 | MS.gene032882:intron | 35.0% | |
| AGCATTGTTACACTGATACA+TGG | + | chr5.4:30039218-30039237 | MS.gene032882:intron | 35.0% | |
| ATGAAACTCGAACAAATGAG+AGG | + | chr5.4:30041545-30041564 | MS.gene032882:intron | 35.0% | |
| ATGTAGCCTAAGATAAACAC+AGG | - | chr5.4:30042025-30042044 | None:intergenic | 35.0% | |
| CCCAATACTCAACATGTTAA+TGG | + | chr5.4:30039982-30040001 | MS.gene032882:intron | 35.0% | |
| CGAACAAGAGGAAAAAATAG+CGG | - | chr5.4:30040865-30040884 | None:intergenic | 35.0% | |
| CTACCAAAAACCAACACATT+TGG | - | chr5.4:30039644-30039663 | None:intergenic | 35.0% | |
| CTCATTGTACCCTATTCATT+TGG | + | chr5.4:30042895-30042914 | MS.gene032882:CDS | 35.0% | |
| GAATAATGTGCTTCCCTAAA+GGG | + | chr5.4:30039359-30039378 | MS.gene032882:intron | 35.0% | |
| GAGGACTAAAACATAGTAGA+GGG | + | chr5.4:30039258-30039277 | MS.gene032882:intron | 35.0% | |
| GATGTAATGCCAAATGCTAA+TGG | + | chr5.4:30039900-30039919 | MS.gene032882:intron | 35.0% | |
| GCATCTGTAGATACTATAGT+GGG | + | chr5.4:30042064-30042083 | MS.gene032882:intron | 35.0% | |
| GCCATTAACATGTTGAGTAT+TGG | - | chr5.4:30039986-30040005 | None:intergenic | 35.0% | |
| GGCAAAGGAGAAGAAAAAAA+TGG | - | chr5.4:30043013-30043032 | None:intergenic | 35.0% | |
| GGTATTTGGTTACCATTACA+AGG | - | chr5.4:30039964-30039983 | None:intergenic | 35.0% | |
| GGTTAGGGTTAAAGATTAAG+TGG | + | chr5.4:30041090-30041109 | MS.gene032882:intron | 35.0% | |
| GTATAGAGCTCCAAATGAAT+AGG | - | chr5.4:30042908-30042927 | None:intergenic | 35.0% | |
| TAAGAGGCTTTCTATTGGAT+TGG | - | chr5.4:30039684-30039703 | None:intergenic | 35.0% | |
| TAGACCTTGTAAAGCTTACA+AGG | + | chr5.4:30043248-30043267 | MS.gene032882:CDS | 35.0% | |
| TCATCCTTGTAAGCTTTACA+AGG | - | chr5.4:30043255-30043274 | None:intergenic | 35.0% | |
| TCGTTTAAGAGGCTTTCTAT+TGG | - | chr5.4:30039689-30039708 | None:intergenic | 35.0% | |
| TGAATAATGTGCTTCCCTAA+AGG | + | chr5.4:30039358-30039377 | MS.gene032882:intron | 35.0% | |
| TGCATCTGTAGATACTATAG+TGG | + | chr5.4:30042063-30042082 | MS.gene032882:intron | 35.0% | |
| TGTCAGACATCTTATGATTG+AGG | + | chr5.4:30039556-30039575 | MS.gene032882:intron | 35.0% | |
| TTCATTCATCCAAACCTTGA+AGG | + | chr5.4:30041032-30041051 | MS.gene032882:intron | 35.0% | |
| TTCGGGACACAACATATATT+CGG | + | chr5.4:30041581-30041600 | MS.gene032882:intron | 35.0% | |
| TTGTCCCACATAACAAAGAA+CGG | - | chr5.4:30043168-30043187 | None:intergenic | 35.0% | |
| TTTCTTGCTTCCAAATGTGT+TGG | + | chr5.4:30039631-30039650 | MS.gene032882:intron | 35.0% | |
| TTTGACCTTACCATTCAACT+TGG | + | chr5.4:30039511-30039530 | MS.gene032882:intron | 35.0% | |
| TTTGAGCCTGTGTTTATCTT+AGG | + | chr5.4:30042016-30042035 | MS.gene032882:intron | 35.0% | |
| ! | AATGACGATGGATTTGGATT+TGG | + | chr5.4:30041228-30041247 | MS.gene032882:intron | 35.0% |
| ! | ATATTGCCTAAGCTGGTTTA+TGG | + | chr5.4:30041679-30041698 | MS.gene032882:intron | 35.0% |
| ! | ATGACGATGGATTTGGATTT+GGG | + | chr5.4:30041229-30041248 | MS.gene032882:intron | 35.0% |
| ! | CGCTTATGTTCATCCTTTTA+TGG | - | chr5.4:30040447-30040466 | None:intergenic | 35.0% |
| ! | GATGCAAATATTGGGTTTTG+TGG | + | chr5.4:30041147-30041166 | MS.gene032882:intron | 35.0% |
| ! | GCTTTATCTTTTCTCCTATC+TGG | + | chr5.4:30042970-30042989 | MS.gene032882:CDS | 35.0% |
| ! | GGATCAAGATTAGGTCTTTT+AGG | - | chr5.4:30039846-30039865 | None:intergenic | 35.0% |
| ! | TCATTTGTTCGAGTTTCATG+TGG | - | chr5.4:30041544-30041563 | None:intergenic | 35.0% |
| ! | TTCGAGTTCAGAGCTAAATA+GGG | + | chr5.4:30041858-30041877 | MS.gene032882:intron | 35.0% |
| !! | AAGGAGAGAAGTATTCTCAT+TGG | - | chr5.4:30042755-30042774 | None:intergenic | 35.0% |
| !! | ACATGGAAGCATTTGACTTT+GGG | + | chr5.4:30039235-30039254 | MS.gene032882:intron | 35.0% |
| !! | ATAGTTGATGATGTACATCG+TGG | - | chr5.4:30043119-30043138 | None:intergenic | 35.0% |
| !! | CATGTTGAGTATTGGGTATT+TGG | - | chr5.4:30039978-30039997 | None:intergenic | 35.0% |
| !! | TACATGGAAGCATTTGACTT+TGG | + | chr5.4:30039234-30039253 | MS.gene032882:intron | 35.0% |
| !! | TATTGGGTTGGATCAAGATT+AGG | - | chr5.4:30039855-30039874 | None:intergenic | 35.0% |
| !! | TTTCGAGTTCAGAGCTAAAT+AGG | + | chr5.4:30041857-30041876 | MS.gene032882:intron | 35.0% |
| !! | TTTTCGAGCCAAATCTTGTA+TGG | + | chr5.4:30042305-30042324 | MS.gene032882:intron | 35.0% |
| !!! | AATGTGTTGGTTTTTGGTAG+GGG | + | chr5.4:30039644-30039663 | MS.gene032882:intron | 35.0% |
| !!! | CAAATGTGTTGGTTTTTGGT+AGG | + | chr5.4:30039642-30039661 | MS.gene032882:intron | 35.0% |
| !!! | CTTCCAAATGTGTTGGTTTT+TGG | + | chr5.4:30039638-30039657 | MS.gene032882:intron | 35.0% |
| !!! | TTTGTTTTTGTGTAGGTGAC+AGG | + | chr5.4:30042709-30042728 | MS.gene032882:intron | 35.0% |
| !!! | TTTTGGTTGGTTCGTTTAAG+AGG | - | chr5.4:30039700-30039719 | None:intergenic | 35.0% |
| AAACCTCCATAAACCAGCTT+AGG | - | chr5.4:30041688-30041707 | None:intergenic | 40.0% | |
| AACATATGGAATAGGTTCCC+CGG | - | chr5.4:30043075-30043094 | None:intergenic | 40.0% | |
| AACGTAGATCCTTAAGGTTG+AGG | - | chr5.4:30039186-30039205 | None:intergenic | 40.0% | |
| AATGGCAACCGAATCATGAT+AGG | + | chr5.4:30040000-30040019 | MS.gene032882:intron | 40.0% | |
| ACAATCTTCTTCCGAACGAT+TGG | - | chr5.4:30040475-30040494 | None:intergenic | 40.0% | |
| ACTTGTCTCGATCAGTTTAG+AGG | + | chr5.4:30042257-30042276 | MS.gene032882:intron | 40.0% | |
| AGAGATTTATCTGAAGGACG+AGG | + | chr5.4:30039102-30039121 | MS.gene032882:CDS | 40.0% | |
| ATCACACGGGTATCAACAAT+TGG | + | chr5.4:30039065-30039084 | MS.gene032882:CDS | 40.0% | |
| ATCCAAACCTTGAAGGAACA+AGG | + | chr5.4:30041039-30041058 | MS.gene032882:intron | 40.0% | |
| CAATCTTCTTCCGAACGATT+GGG | - | chr5.4:30040474-30040493 | None:intergenic | 40.0% | |
| CCTTCTATGAGCTTACGAAA+GGG | - | chr5.4:30039145-30039164 | None:intergenic | 40.0% | |
| CCTTTCGTAAGCTCATAGAA+GGG | + | chr5.4:30039143-30039162 | MS.gene032882:CDS | 40.0% | |
| CTATACAATCATCCCATCGA+GGG | + | chr5.4:30042922-30042941 | MS.gene032882:CDS | 40.0% | |
| CTCATAAGTACCAGGAACTA+GGG | - | chr5.4:30040400-30040419 | None:intergenic | 40.0% | |
| CTCTAATGAGTATGGCATGT+AGG | - | chr5.4:30043202-30043221 | None:intergenic | 40.0% | |
| GCTCTCTTCTCTAATGAGTA+TGG | - | chr5.4:30043210-30043229 | None:intergenic | 40.0% | |
| GGAGACGAGACTAAAAAAAG+AGG | - | chr5.4:30039316-30039335 | None:intergenic | 40.0% | |
| GGAGGACTAAAACATAGTAG+AGG | + | chr5.4:30039257-30039276 | MS.gene032882:intron | 40.0% | |
| GGGTTTCTGATGAGATGTTA+GGG | + | chr5.4:30041251-30041270 | MS.gene032882:intron | 40.0% | |
| GTTATGTGGGACAAAATCCT+GGG | + | chr5.4:30043174-30043193 | MS.gene032882:CDS | 40.0% | |
| TATACAATCATCCCATCGAG+GGG | + | chr5.4:30042923-30042942 | MS.gene032882:CDS | 40.0% | |
| TATCGTGTGTACATGTACGT+TGG | - | chr5.4:30040813-30040832 | None:intergenic | 40.0% | |
| TCAACCTTAAGGATCTACGT+TGG | + | chr5.4:30039185-30039204 | MS.gene032882:CDS | 40.0% | |
| TCACCAGTGTTGTCAAATAG+CGG | + | chr5.4:30042356-30042375 | MS.gene032882:intron | 40.0% | |
| TCATAAGTACCAGGAACTAG+GGG | - | chr5.4:30040399-30040418 | None:intergenic | 40.0% | |
| TCATTAGAGAAGAGAGCTAG+TGG | + | chr5.4:30043213-30043232 | MS.gene032882:CDS | 40.0% | |
| TCCAAACCTTGAAGGAACAA+GGG | + | chr5.4:30041040-30041059 | MS.gene032882:intron | 40.0% | |
| TCTATACAATCATCCCATCG+AGG | + | chr5.4:30042921-30042940 | MS.gene032882:CDS | 40.0% | |
| TCTCTTCTCTTCTCTCTCTT+TGG | + | chr5.4:30040933-30040952 | MS.gene032882:intron | 40.0% | |
| TGTTATGTGGGACAAAATCC+TGG | + | chr5.4:30043173-30043192 | MS.gene032882:CDS | 40.0% | |
| TTACATGGTCCTCAACCTTA+AGG | + | chr5.4:30039174-30039193 | MS.gene032882:CDS | 40.0% | |
| ! | CATATATGCCATTTGACCTC+AGG | + | chr5.4:30040515-30040534 | MS.gene032882:intron | 40.0% |
| ! | GAGCGATTTAGTTCAGTTTG+TGG | + | chr5.4:30039779-30039798 | MS.gene032882:intron | 40.0% |
| ! | GCAACCGTTCTTTGTTATGT+GGG | + | chr5.4:30043161-30043180 | MS.gene032882:CDS | 40.0% |
| ! | GGATTAGGTTTTTCCACAGA+AGG | - | chr5.4:30040968-30040987 | None:intergenic | 40.0% |
| ! | GTGAGAAATGACGATGGATT+TGG | + | chr5.4:30041222-30041241 | MS.gene032882:intron | 40.0% |
| ! | TGACGATGGATTTGGATTTG+GGG | + | chr5.4:30041230-30041249 | MS.gene032882:intron | 40.0% |
| ! | TTAGGTTTTTCCACAGAAGG+AGG | - | chr5.4:30040965-30040984 | None:intergenic | 40.0% |
| !! | ATCATCCACGGTTTTAATGG+TGG | - | chr5.4:30043034-30043053 | None:intergenic | 40.0% |
| !! | ATTCCCTTCTCATTGGCTTT+AGG | + | chr5.4:30040996-30041015 | MS.gene032882:intron | 40.0% |
| !! | CAATGTTGGTAATGGACACA+TGG | + | chr5.4:30042800-30042819 | MS.gene032882:CDS | 40.0% |
| !! | CATGGAAGCATTTGACTTTG+GGG | + | chr5.4:30039236-30039255 | MS.gene032882:intron | 40.0% |
| !! | GTGATCATCCACGGTTTTAA+TGG | - | chr5.4:30043037-30043056 | None:intergenic | 40.0% |
| !! | TATCATGCTGAGTATTGGGT+TGG | - | chr5.4:30039867-30039886 | None:intergenic | 40.0% |
| !!! | GTGGTTGACGTTGTTTTGAT+AGG | - | chr5.4:30039415-30039434 | None:intergenic | 40.0% |
| ACATATGGAATAGGTTCCCC+GGG | - | chr5.4:30043074-30043093 | None:intergenic | 45.0% | |
| ACTTGATCCCTTGCACAAGA+AGG | - | chr5.4:30039607-30039626 | None:intergenic | 45.0% | |
| AGAAGGGTTCGAGCTTTACA+TGG | + | chr5.4:30039159-30039178 | MS.gene032882:CDS | 45.0% | |
| ATCCCTTGCACAAGAAGGAT+GGG | - | chr5.4:30039602-30039621 | None:intergenic | 45.0% | |
| CCAGAGAAGAGGTCCTTTAA+GGG | + | chr5.4:30039450-30039469 | MS.gene032882:intron | 45.0% | |
| CCCTTCTATGAGCTTACGAA+AGG | - | chr5.4:30039146-30039165 | None:intergenic | 45.0% | |
| CCCTTTCGTAAGCTCATAGA+AGG | + | chr5.4:30039142-30039161 | MS.gene032882:CDS | 45.0% | |
| CCTAGTTCCTGGTACTTATG+AGG | + | chr5.4:30040398-30040417 | MS.gene032882:intron | 45.0% | |
| CCTCATAAGTACCAGGAACT+AGG | - | chr5.4:30040401-30040420 | None:intergenic | 45.0% | |
| CCTTACCATTCAACTTGGAG+CGG | + | chr5.4:30039516-30039535 | MS.gene032882:intron | 45.0% | |
| CGTCAACCACCATGAATATG+AGG | + | chr5.4:30039425-30039444 | MS.gene032882:intron | 45.0% | |
| CTTCTTAACGACACAATCGG+CGG | + | chr5.4:30042946-30042965 | MS.gene032882:CDS | 45.0% | |
| CTTTGCCACCATTAAAACCG+TGG | + | chr5.4:30043026-30043045 | MS.gene032882:CDS | 45.0% | |
| GATCACGGTGCGATTTAGTT+TGG | - | chr5.4:30040375-30040394 | None:intergenic | 45.0% | |
| GCGGACAATCATGTGTGTTA+CGG | - | chr5.4:30040846-30040865 | None:intergenic | 45.0% | |
| GGGCTTCTTAACGACACAAT+CGG | + | chr5.4:30042943-30042962 | MS.gene032882:CDS | 45.0% | |
| GGGGTTTCTGATGAGATGTT+AGG | + | chr5.4:30041250-30041269 | MS.gene032882:intron | 45.0% | |
| TAAGCGTGTACCCAATCGTT+CGG | + | chr5.4:30040461-30040480 | MS.gene032882:intron | 45.0% | |
| TAGCCGCTATTTGACAACAC+TGG | - | chr5.4:30042362-30042381 | None:intergenic | 45.0% | |
| TCCAGAATCATGCGAACAAG+AGG | - | chr5.4:30040877-30040896 | None:intergenic | 45.0% | |
| TCCCTTGTTCCTTCAAGGTT+TGG | - | chr5.4:30041044-30041063 | None:intergenic | 45.0% | |
| TCCTCTTGTTCGCATGATTC+TGG | + | chr5.4:30040873-30040892 | MS.gene032882:intron | 45.0% | |
| TCGCTCGGCTGAGTAAAAAA+TGG | - | chr5.4:30039765-30039784 | None:intergenic | 45.0% | |
| TCTCTTCCCTTGTTCCTTCA+AGG | - | chr5.4:30041049-30041068 | None:intergenic | 45.0% | |
| TCTGAAGGACGAGGAGTTAA+TGG | + | chr5.4:30039111-30039130 | MS.gene032882:CDS | 45.0% | |
| TTAGAGAAGAGAGCTAGTGG+TGG | + | chr5.4:30043216-30043235 | MS.gene032882:CDS | 45.0% | |
| TTCCAAGCCTCATAAGTACC+AGG | - | chr5.4:30040408-30040427 | None:intergenic | 45.0% | |
| TTCCCATCCTTCTTGTGCAA+GGG | + | chr5.4:30039597-30039616 | MS.gene032882:intron | 45.0% | |
| TTCCTGGTACTTATGAGGCT+TGG | + | chr5.4:30040403-30040422 | MS.gene032882:intron | 45.0% | |
| TTGCACAAGAAGGATGGGAA+GGG | - | chr5.4:30039597-30039616 | None:intergenic | 45.0% | |
| ! | ATTGCAGACTTGGGTTCTAG+TGG | + | chr5.4:30042172-30042191 | MS.gene032882:intron | 45.0% |
| ! | CGCAACCGTTCTTTGTTATG+TGG | + | chr5.4:30043160-30043179 | MS.gene032882:CDS | 45.0% |
| ! | GACGATGGATTTGGATTTGG+GGG | + | chr5.4:30041231-30041250 | MS.gene032882:intron | 45.0% |
| ! | GCTCTGAACTCGAAACAACT+AGG | - | chr5.4:30041852-30041871 | None:intergenic | 45.0% |
| ! | GTTTTTCCACAGAAGGAGGA+AGG | - | chr5.4:30040961-30040980 | None:intergenic | 45.0% |
| ! | TTGCCTAAGCTGGTTTATGG+AGG | + | chr5.4:30041682-30041701 | MS.gene032882:intron | 45.0% |
| !! | CACGGTTTTAATGGTGGCAA+AGG | - | chr5.4:30043028-30043047 | None:intergenic | 45.0% |
| !!! | GACGTTGTTTTGATAGGAGC+AGG | - | chr5.4:30039409-30039428 | None:intergenic | 45.0% |
| !!! | GTTGTTTTGATAGGAGCAGG+AGG | - | chr5.4:30039406-30039425 | None:intergenic | 45.0% |
| !!! | AACTAATTTAAATTTTTTAA+CGG | + | chr5.4:30040654-30040673 | MS.gene032882:intron | 5.0% |
| AGAGGTCCTGGCTTCGAATT+CGG | + | chr5.4:30041563-30041582 | MS.gene032882:intron | 50.0% | |
| AGTATGGCATGTAGGTACCC+AGG | - | chr5.4:30043194-30043213 | None:intergenic | 50.0% | |
| CACGCCAACGTAGATCCTTA+AGG | - | chr5.4:30039192-30039211 | None:intergenic | 50.0% | |
| CCCTTAAAGGACCTCTTCTC+TGG | - | chr5.4:30039453-30039472 | None:intergenic | 50.0% | |
| CTCGAACAAATGAGAGGTCC+TGG | + | chr5.4:30041551-30041570 | MS.gene032882:intron | 50.0% | |
| CTCGAGGACTCATACCAGAT+AGG | - | chr5.4:30042987-30043006 | None:intergenic | 50.0% | |
| CTGCCGCGCAAAATATTCGT+GGG | + | chr5.4:30039475-30039494 | MS.gene032882:intron | 50.0% | |
| CTTCCCATCCTTCTTGTGCA+AGG | + | chr5.4:30039596-30039615 | MS.gene032882:intron | 50.0% | |
| CTTGCACAAGAAGGATGGGA+AGG | - | chr5.4:30039598-30039617 | None:intergenic | 50.0% | |
| GATCCCTTGCACAAGAAGGA+TGG | - | chr5.4:30039603-30039622 | None:intergenic | 50.0% | |
| GCCAGAGAAGAGGTCCTTTA+AGG | + | chr5.4:30039449-30039468 | MS.gene032882:intron | 50.0% | |
| TAGCATTTGCCAGTTGAGCC+CGG | + | chr5.4:30041615-30041634 | MS.gene032882:intron | 50.0% | |
| TCAACTTGGAGCGGTGATGA+GGG | + | chr5.4:30039525-30039544 | MS.gene032882:intron | 50.0% | |
| TCGTTAAGAAGCCCCTCGAT+GGG | - | chr5.4:30042937-30042956 | None:intergenic | 50.0% | |
| TCTCTGGCGCCTCATATTCA+TGG | - | chr5.4:30039437-30039456 | None:intergenic | 50.0% | |
| TCTGCCGCGCAAAATATTCG+TGG | + | chr5.4:30039474-30039493 | MS.gene032882:intron | 50.0% | |
| TGCCGCGCAAAATATTCGTG+GGG | + | chr5.4:30039476-30039495 | MS.gene032882:intron | 50.0% | |
| TTCAACTTGGAGCGGTGATG+AGG | + | chr5.4:30039524-30039543 | MS.gene032882:intron | 50.0% | |
| TTCATAAGTCCGGGCTCAAC+TGG | - | chr5.4:30041627-30041646 | None:intergenic | 50.0% | |
| TTGGAACCTTCCTCCTTCTG+TGG | + | chr5.4:30040952-30040971 | MS.gene032882:intron | 50.0% | |
| ! | AATATGAGGCGCCAGAGAAG+AGG | + | chr5.4:30039439-30039458 | MS.gene032882:intron | 50.0% |
| ! | CATCACCGCTCCAAGTTGAA+TGG | - | chr5.4:30039524-30039543 | None:intergenic | 50.0% |
| ! | CCGCTCCAAGTTGAATGGTA+AGG | - | chr5.4:30039519-30039538 | None:intergenic | 50.0% |
| ! | CTCCCCACGAATATTTTGCG+CGG | - | chr5.4:30039481-30039500 | None:intergenic | 50.0% |
| !! | GGAAGCATTTGACTTTGGGG+AGG | + | chr5.4:30039239-30039258 | MS.gene032882:intron | 50.0% |
| CAACTTGGAGCGGTGATGAG+GGG | + | chr5.4:30039526-30039545 | MS.gene032882:intron | 55.0% | |
| CCAGGAACTAGGGGTGATCA+CGG | - | chr5.4:30040390-30040409 | None:intergenic | 55.0% | |
| CGCGCAAAATATTCGTGGGG+AGG | + | chr5.4:30039479-30039498 | MS.gene032882:intron | 55.0% | |
| CTGGCGCCTCATATTCATGG+TGG | - | chr5.4:30039434-30039453 | None:intergenic | 55.0% | |
| GAGGTCCTGGCTTCGAATTC+GGG | + | chr5.4:30041564-30041583 | MS.gene032882:intron | 55.0% | |
| GGGCGTGTGAGAAATGACGA+TGG | + | chr5.4:30041216-30041235 | MS.gene032882:intron | 55.0% | |
| GTCGTTAAGAAGCCCCTCGA+TGG | - | chr5.4:30042938-30042957 | None:intergenic | 55.0% | |
| TAAAGGGGCTGCGATGGGTA+GGG | + | chr5.4:30039375-30039394 | MS.gene032882:intron | 55.0% | |
| TACCCATCGCAGCCCCTTTA+GGG | - | chr5.4:30039375-30039394 | None:intergenic | 55.0% | |
| TGTGTCCCGAATTCGAAGCC+AGG | - | chr5.4:30041572-30041591 | None:intergenic | 55.0% | |
| TTCCCTAAAGGGGCTGCGAT+GGG | + | chr5.4:30039370-30039389 | MS.gene032882:intron | 55.0% | |
| TTGCGCGGCAGAACCCTTAA+AGG | - | chr5.4:30039466-30039485 | None:intergenic | 55.0% | |
| AAAGGGGCTGCGATGGGTAG+GGG | + | chr5.4:30039376-30039395 | MS.gene032882:intron | 60.0% | |
| CCGTGATCACCCCTAGTTCC+TGG | + | chr5.4:30040387-30040406 | MS.gene032882:intron | 60.0% | |
| CTAAAGGGGCTGCGATGGGT+AGG | + | chr5.4:30039374-30039393 | MS.gene032882:intron | 60.0% | |
| CTACCCATCGCAGCCCCTTT+AGG | - | chr5.4:30039376-30039395 | None:intergenic | 60.0% | |
| CTTCCCTAAAGGGGCTGCGA+TGG | + | chr5.4:30039369-30039388 | MS.gene032882:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 30039058 | 30043278 | 30039058 | ID=MS.gene032882 |
| chr5.4 | mRNA | 30039058 | 30043278 | 30039058 | ID=MS.gene032882.t1;Parent=MS.gene032882 |
| chr5.4 | exon | 30039058 | 30039214 | 30039058 | ID=MS.gene032882.t1.exon1;Parent=MS.gene032882.t1 |
| chr5.4 | CDS | 30039058 | 30039214 | 30039058 | ID=cds.MS.gene032882.t1;Parent=MS.gene032882.t1 |
| chr5.4 | exon | 30041293 | 30041465 | 30041293 | ID=MS.gene032882.t1.exon2;Parent=MS.gene032882.t1 |
| chr5.4 | CDS | 30041293 | 30041465 | 30041293 | ID=cds.MS.gene032882.t1;Parent=MS.gene032882.t1 |
| chr5.4 | exon | 30042724 | 30043278 | 30042724 | ID=MS.gene032882.t1.exon3;Parent=MS.gene032882.t1 |
| chr5.4 | CDS | 30042724 | 30043278 | 30042724 | ID=cds.MS.gene032882.t1;Parent=MS.gene032882.t1 |
| Gene Sequence |
| Protein sequence |
