AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene023349

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene023349.t1 MTR_8g079492 99.235 915 6 1 1 915 1 914 0.0 1870
MS.gene023349.t1 MTR_8g079492 99.127 916 6 2 1 915 1 915 0.0 1867
MS.gene023349.t1 MTR_8g079492 99.160 833 6 1 83 915 1 832 0.0 1699
MS.gene023349.t1 MTR_2g018690 78.817 930 160 11 1 915 1 908 0.0 1400
MS.gene023349.t1 MTR_5g076270 56.022 930 305 20 1 915 1 841 0.0 918
MS.gene023349.t1 MTR_3g064050 56.446 923 285 25 17 915 20 849 0.0 885
MS.gene023349.t1 MTR_4g124900 61.053 475 165 12 1 467 1 463 2.81e-173 533
MS.gene023349.t1 MTR_4g124900 45.509 167 77 4 719 874 922 1085 6.24e-33 138
MS.gene023349.t1 MTR_4g124900 61.053 475 165 12 1 467 1 463 2.82e-173 532
MS.gene023349.t1 MTR_4g124900 45.509 167 77 4 719 874 899 1062 7.18e-33 138
MS.gene023349.t1 MTR_2g043250 59.267 491 172 13 1 472 1 482 9.09e-167 516
MS.gene023349.t1 MTR_2g043250 43.407 182 84 5 706 874 903 1078 3.80e-32 135
MS.gene023349.t1 MTR_3g064050 47.301 704 257 22 234 915 1 612 1.20e-164 494
MS.gene023349.t1 MTR_8g101360 53.263 567 247 9 5 556 10 573 7.09e-161 500
MS.gene023349.t1 MTR_8g101360 66.667 93 31 0 782 874 984 1076 1.77e-34 143
MS.gene023349.t1 MTR_1g024025 66.757 367 117 4 15 379 35 398 1.45e-157 496
MS.gene023349.t1 MTR_1g024025 50.806 124 61 0 764 887 736 859 8.05e-31 131
MS.gene023349.t1 MTR_1g024025 65.116 86 27 1 215 300 861 943 2.54e-19 94.4
MS.gene023349.t1 MTR_1g024025 38.710 124 57 1 764 887 1160 1264 2.54e-16 84.7
MS.gene023349.t1 MTR_2g005240 54.795 365 161 3 19 382 19 380 5.36e-127 399
MS.gene023349.t1 MTR_2g005240 36.957 92 56 2 780 870 545 635 1.97e-13 74.7
MS.gene023349.t1 MTR_8g100050 52.055 365 172 3 19 382 55 417 1.27e-124 394
MS.gene023349.t1 MTR_8g100050 52.055 365 172 3 19 382 55 417 7.32e-124 395
MS.gene023349.t1 MTR_8g100050 43.434 99 54 2 782 879 710 807 9.24e-17 85.9
MS.gene023349.t1 MTR_8g027440 53.488 344 154 4 20 362 26 364 1.55e-116 371
MS.gene023349.t1 MTR_8g027440 32.653 196 96 7 698 870 463 645 2.13e-16 84.3
MS.gene023349.t1 MTR_2g093740 50.689 363 166 5 23 374 56 416 5.23e-115 368
MS.gene023349.t1 MTR_2g093740 50.689 363 166 5 23 374 56 416 3.06e-114 367
MS.gene023349.t1 MTR_2g093740 40.206 97 55 3 754 849 655 749 2.54e-15 80.9
MS.gene023349.t1 MTR_2g093740 50.689 363 166 5 23 374 56 416 8.19e-114 368
MS.gene023349.t1 MTR_2g093740 39.831 118 68 3 754 870 655 770 1.25e-19 95.1
MS.gene023349.t1 MTR_2g093740 48.936 376 166 6 23 374 56 429 4.09e-111 358
MS.gene023349.t1 MTR_4g021580 52.210 362 162 7 21 377 17 372 7.42e-111 354
MS.gene023349.t1 MTR_4g021580 52.210 362 162 7 21 377 17 372 1.27e-110 355
MS.gene023349.t1 MTR_4g021580 39.560 91 52 2 781 870 554 642 6.23e-14 76.3
MS.gene023349.t1 MTR_2g093740 48.936 376 166 6 23 374 56 429 1.78e-110 358
MS.gene023349.t1 MTR_2g093740 40.206 97 55 3 754 849 668 762 2.67e-15 80.9
MS.gene023349.t1 MTR_2g093740 48.936 376 166 6 23 374 56 429 6.36e-110 358
MS.gene023349.t1 MTR_2g093740 39.831 118 68 3 754 870 668 783 1.47e-19 94.7
MS.gene023349.t1 MTR_7g062540 48.806 377 176 8 15 383 6 373 1.81e-109 352
MS.gene023349.t1 MTR_7g062540 38.710 93 54 2 781 872 569 659 1.64e-14 78.2
MS.gene023349.t1 MTR_4g060460 49.589 365 169 6 23 375 54 415 1.69e-108 353
MS.gene023349.t1 MTR_4g060460 41.489 94 53 2 778 870 659 751 1.40e-17 88.2
MS.gene023349.t1 MTR_4g060460 49.589 365 169 6 23 375 54 415 1.79e-108 353
MS.gene023349.t1 MTR_4g060460 41.489 94 53 2 778 870 654 746 1.40e-17 88.2
MS.gene023349.t1 MTR_2g014770 48.485 363 169 5 4 357 35 388 4.03e-107 344
MS.gene023349.t1 MTR_2g014770 48.485 363 169 5 4 357 35 388 2.55e-106 344
MS.gene023349.t1 MTR_4g088210 46.825 378 169 7 23 382 38 401 1.58e-104 340
MS.gene023349.t1 MTR_4g088210 46.825 378 169 7 23 382 38 401 3.22e-104 340
MS.gene023349.t1 MTR_2g093740 54.297 256 115 2 120 374 32 286 1.19e-88 295
MS.gene023349.t1 MTR_2g093740 40.206 97 55 3 754 849 525 619 2.59e-15 80.9
MS.gene023349.t1 MTR_2g093740 54.297 256 115 2 120 374 32 286 2.55e-88 296
MS.gene023349.t1 MTR_2g093740 39.831 118 68 3 754 870 525 640 8.99e-20 95.1
MS.gene023349.t1 MTR_2g093740 51.673 269 115 3 120 374 32 299 7.55e-85 285
MS.gene023349.t1 MTR_2g093740 40.206 97 55 3 754 849 538 632 2.80e-15 80.5
MS.gene023349.t1 MTR_2g093740 51.673 269 115 3 120 374 32 299 1.38e-84 286
MS.gene023349.t1 MTR_2g093740 39.831 118 68 3 754 870 538 653 1.08e-19 95.1
MS.gene023349.t1 MTR_4g058930 39.150 447 204 11 13 402 2 437 8.28e-84 283
MS.gene023349.t1 MTR_4g058930 39.150 447 204 11 13 402 2 437 1.77e-83 283
MS.gene023349.t1 MTR_2g094570 38.592 412 204 8 12 381 56 460 1.96e-82 282
MS.gene023349.t1 MTR_2g094570 39.558 407 197 9 17 381 5 404 2.24e-82 279
MS.gene023349.t1 MTR_2g094570 38.821 407 200 8 17 381 5 404 3.20e-82 280
MS.gene023349.t1 MTR_1g094960 38.049 410 209 8 13 384 9 411 1.54e-79 270
MS.gene023349.t1 MTR_1g064430 36.160 401 204 6 14 368 18 412 7.11e-73 254
MS.gene023349.t1 MTR_1g064430 36.160 401 204 6 14 368 31 425 1.04e-72 254
MS.gene023349.t1 MTR_3g073420 36.683 398 211 6 11 374 7 397 3.81e-69 241
MS.gene023349.t1 MTR_8g446900 38.415 328 185 7 65 383 3 322 2.07e-65 224
MS.gene023349.t1 MTR_7g101280 35.012 417 212 12 18 383 26 434 5.83e-64 228
MS.gene023349.t1 MTR_0041s0110 35.012 417 212 12 18 383 26 434 5.83e-64 228
MS.gene023349.t1 MTR_5g061220 34.684 395 209 11 10 375 11 385 4.04e-58 209
MS.gene023349.t1 MTR_5g040880 33.071 381 233 9 16 391 4 367 1.81e-57 207
MS.gene023349.t1 MTR_5g074840 59.259 189 42 3 104 288 5 162 1.28e-55 189
MS.gene023349.t1 MTR_7g101275 36.513 304 183 6 32 332 1 297 5.45e-55 196
MS.gene023349.t1 MTR_5g082140 35.813 363 212 10 12 369 3 349 1.22e-54 197
MS.gene023349.t1 MTR_1g058210 33.602 372 221 12 11 375 3 355 6.33e-52 189
MS.gene023349.t1 MTR_0041s0120 35.202 321 176 10 32 332 1 309 2.93e-49 180
MS.gene023349.t1 MTR_2g024430 33.699 365 200 14 11 362 11 346 2.96e-48 180
MS.gene023349.t1 MTR_2g006270 32.386 352 217 8 23 369 13 348 6.76e-46 172
MS.gene023349.t1 MTR_5g040740 31.858 339 176 12 20 336 9 314 7.07e-42 159
MS.gene023349.t1 MTR_2g006380 31.461 356 208 12 23 369 20 348 3.66e-41 158
MS.gene023349.t1 MTR_5g060630 27.415 383 231 8 18 367 7 375 1.99e-36 145
MS.gene023349.t1 MTR_5g460740 27.415 383 231 8 18 367 7 375 1.99e-36 145
MS.gene023349.t1 MTR_5g062970 36.098 205 124 3 20 222 35 234 5.40e-34 131
MS.gene023349.t1 MTR_5g060780 29.107 347 216 12 20 356 9 335 5.42e-33 132
MS.gene023349.t1 MTR_5g460920 29.395 347 215 12 20 356 9 335 7.46e-33 132
MS.gene023349.t1 MTR_5g061890 28.814 354 208 12 20 356 9 335 6.49e-32 129
MS.gene023349.t1 MTR_5g032260 42.623 122 66 1 234 355 37 154 1.97e-25 110
MS.gene023349.t1 MTR_2g078580 58.571 70 9 1 104 173 5 54 9.71e-15 75.1
MS.gene023349.t1 MTR_5g060770 25.940 266 139 9 76 337 9 220 1.13e-12 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene023349.t1 AT1G30330 84.156 486 68 5 1 482 1 481 0.0 825
MS.gene023349.t1 AT1G30330 83.811 488 68 6 1 482 1 483 0.0 820
MS.gene023349.t1 AT1G30330 83.811 488 68 6 1 482 1 483 0.0 820
MS.gene023349.t1 AT5G37020 66.904 562 151 9 1 536 1 553 0.0 696
MS.gene023349.t1 AT5G37020 47.458 177 63 10 683 849 616 772 2.28e-30 129
MS.gene023349.t1 AT5G37020 66.904 562 151 9 1 536 1 553 0.0 696
MS.gene023349.t1 AT5G37020 49.505 202 72 10 683 874 616 797 4.43e-41 163
MS.gene023349.t1 AT1G19850 41.466 914 444 24 13 890 43 901 0.0 587
MS.gene023349.t1 AT1G19850 41.466 914 444 24 13 890 32 890 0.0 587
MS.gene023349.t1 AT5G37020 64.807 466 131 7 96 536 1 458 0.0 546
MS.gene023349.t1 AT5G37020 49.505 202 72 10 683 874 521 702 1.90e-41 163
MS.gene023349.t1 AT1G19220 57.853 503 193 12 1 494 1 493 5.76e-170 523
MS.gene023349.t1 AT1G19220 43.939 198 77 7 707 874 857 1050 1.55e-32 137
MS.gene023349.t1 AT5G20730 59.711 484 156 16 4 467 5 469 1.30e-162 506
MS.gene023349.t1 AT5G20730 61.290 93 36 0 782 874 1037 1129 7.88e-30 128
MS.gene023349.t1 AT5G20730 59.588 485 156 17 4 467 5 470 4.04e-161 502
MS.gene023349.t1 AT5G20730 61.290 93 36 0 782 874 1038 1130 7.53e-30 128
MS.gene023349.t1 AT5G20730 59.588 485 156 17 4 467 5 470 9.71e-161 501
MS.gene023349.t1 AT5G20730 61.290 93 36 0 782 874 1038 1130 8.45e-30 128
MS.gene023349.t1 AT5G62000 50.754 398 169 6 3 375 17 412 2.95e-125 400
MS.gene023349.t1 AT5G62000 40.566 106 61 2 771 875 722 826 4.21e-17 87.0
MS.gene023349.t1 AT5G62000 50.754 398 169 6 3 375 17 412 2.95e-125 400
MS.gene023349.t1 AT5G62000 40.566 106 61 2 771 875 722 826 4.21e-17 87.0
MS.gene023349.t1 AT5G62000 50.754 398 169 6 3 375 17 412 2.95e-125 400
MS.gene023349.t1 AT5G62000 40.566 106 61 2 771 875 722 826 4.21e-17 87.0
MS.gene023349.t1 AT5G62000 50.754 398 169 6 3 375 17 412 2.95e-125 400
MS.gene023349.t1 AT5G62000 40.566 106 61 2 771 875 722 826 4.21e-17 87.0
MS.gene023349.t1 AT5G62000 50.754 398 169 6 3 375 17 412 4.53e-125 399
MS.gene023349.t1 AT5G62000 41.584 101 57 2 771 870 722 821 5.01e-17 86.7
MS.gene023349.t1 AT1G59750 53.261 368 164 5 19 382 18 381 1.41e-122 387
MS.gene023349.t1 AT1G59750 38.043 92 55 2 780 870 535 625 1.43e-13 75.1
MS.gene023349.t1 AT1G59750 53.261 368 164 5 19 382 18 381 1.44e-122 387
MS.gene023349.t1 AT1G59750 38.043 92 55 2 780 870 537 627 1.46e-13 75.1
MS.gene023349.t1 AT1G59750 53.261 368 164 5 19 382 18 381 1.84e-122 386
MS.gene023349.t1 AT1G59750 38.043 92 55 2 780 870 540 630 1.36e-13 75.5
MS.gene023349.t1 AT1G59750 53.261 368 164 5 19 382 18 381 1.84e-122 386
MS.gene023349.t1 AT1G59750 38.043 92 55 2 780 870 540 630 1.36e-13 75.5
MS.gene023349.t1 AT5G60450 51.295 386 166 7 14 381 32 413 5.80e-121 385
MS.gene023349.t1 AT5G60450 35.075 134 81 4 752 881 609 740 4.30e-18 90.1
MS.gene023349.t1 AT5G60450 52.116 378 159 7 22 381 64 437 1.59e-120 385
MS.gene023349.t1 AT5G60450 35.075 134 81 4 752 881 633 764 5.09e-18 89.7
MS.gene023349.t1 AT3G61830 54.046 346 152 6 20 363 22 362 1.33e-116 369
MS.gene023349.t1 AT3G61830 34.783 115 63 2 792 906 500 602 8.34e-12 69.3
MS.gene023349.t1 AT2G46530 52.033 369 166 7 1 367 23 382 1.60e-116 369
MS.gene023349.t1 AT2G46530 29.101 189 104 6 690 875 442 603 2.18e-12 71.2
MS.gene023349.t1 AT2G46530 53.714 350 154 6 20 367 18 361 2.44e-116 368
MS.gene023349.t1 AT2G46530 29.101 189 104 6 690 875 421 582 2.21e-12 71.2
MS.gene023349.t1 AT2G33860 46.615 384 182 6 23 391 54 429 1.64e-107 345
MS.gene023349.t1 AT4G23980 51.111 360 165 6 20 375 9 361 2.03e-106 343
MS.gene023349.t1 AT4G23980 32.000 175 96 5 703 870 450 608 6.24e-14 76.3
MS.gene023349.t1 AT4G23980 51.111 360 165 6 20 375 9 361 2.35e-106 343
MS.gene023349.t1 AT4G23980 32.000 175 96 5 703 870 452 610 6.31e-14 76.3
MS.gene023349.t1 AT3G61830 53.333 315 140 6 51 363 2 311 6.43e-102 328
MS.gene023349.t1 AT3G61830 33.858 127 71 3 781 906 437 551 6.33e-12 69.7
MS.gene023349.t1 AT1G34310 43.213 361 197 4 14 374 18 370 1.57e-91 302
MS.gene023349.t1 AT1G34410 42.382 361 200 4 14 374 18 370 1.84e-90 300
MS.gene023349.t1 AT1G35540 42.775 346 190 4 14 359 18 355 4.22e-90 299
MS.gene023349.t1 AT1G35540 27.273 264 165 7 629 870 339 597 1.10e-14 78.6
MS.gene023349.t1 AT1G35240 42.105 361 201 4 14 374 18 370 5.79e-90 298
MS.gene023349.t1 AT1G35520 43.275 342 186 4 17 358 21 354 2.18e-87 291
MS.gene023349.t1 AT1G34170 43.478 345 183 6 17 358 19 354 1.88e-85 283
MS.gene023349.t1 AT1G34390 42.659 361 197 5 14 374 18 368 4.14e-85 285
MS.gene023349.t1 AT2G46530 54.435 248 109 3 120 367 31 274 3.52e-83 277
MS.gene023349.t1 AT2G46530 29.101 189 104 6 690 875 334 495 1.17e-12 72.0
MS.gene023349.t1 AT2G33860 50.368 272 128 3 126 391 2 272 3.09e-82 273
MS.gene023349.t1 AT2G28350 38.771 423 197 12 16 387 3 414 3.13e-81 276
MS.gene023349.t1 AT2G28350 38.771 423 197 12 16 387 3 414 5.51e-81 276
MS.gene023349.t1 AT4G30080 39.401 401 182 10 11 361 7 396 4.86e-80 273
MS.gene023349.t1 AT1G34170 40.000 345 169 5 17 358 19 328 2.99e-75 254
MS.gene023349.t1 AT1G34170 40.000 345 169 5 17 358 19 328 1.53e-74 255
MS.gene023349.t1 AT1G77850 34.586 399 214 9 18 379 14 402 9.44e-59 212
MS.gene023349.t1 AT1G77850 34.586 399 214 9 18 379 14 402 9.58e-59 212
MS.gene023349.t1 AT1G43950 43.396 212 113 3 14 225 18 222 2.74e-51 180

Find 238 sgRNAs with CRISPR-Local

Find 442 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTGACTTTCTTGATTCTT+TGG 0.189382 4.4:-16951692 None:intergenic
ACTGAACGCCAATGTGAATT+TGG 0.198542 4.4:-16950611 None:intergenic
AGCGAGCTTGCTCGTATGTT+TGG 0.229386 4.4:+16952781 MS.gene023349:CDS
GGCTTGAAGGATGATGATTT+TGG 0.256318 4.4:+16951368 MS.gene023349:intron
TGGGGAGGCAAGCTTGGATT+TGG 0.258643 4.4:-16948451 None:intergenic
TACATTGGAAAGGTTGTTAA+TGG 0.261279 4.4:-16950870 None:intergenic
CTCGGGGTAGTTGGAGAATT+TGG 0.262748 4.4:-16952752 None:intergenic
TTTCAGTTGGTATGCGCTTC+AGG 0.267893 4.4:+16950003 MS.gene023349:CDS
TGGAACCATACAGGATTTAA+AGG 0.267911 4.4:-16948697 None:intergenic
TATGGCAGCTGCTGCACTTC+AGG 0.270423 4.4:+16951532 MS.gene023349:CDS
GTGATTCAGTGCTGTTTATA+TGG 0.300184 4.4:+16949334 MS.gene023349:CDS
GTGGACCCTCTCCTCTCTTC+AGG 0.319064 4.4:+16952169 MS.gene023349:CDS
ATCAGTTGCTTCTAGGTATT+CGG 0.320485 4.4:+16949703 MS.gene023349:CDS
TCTCCTTTGCACAATATGTT+AGG 0.328788 4.4:+16952043 MS.gene023349:CDS
AGCTGCCAGCCTGATCTTAC+AGG 0.338609 4.4:-16952826 None:intergenic
AGCAAGCTCGCTGCGTAGCT+CGG 0.341770 4.4:-16952770 None:intergenic
ATACCGTGGGTTATAGAAAA+TGG 0.343955 4.4:-16949838 None:intergenic
GCGAGCTTGCTCGTATGTTT+GGG 0.344249 4.4:+16952782 MS.gene023349:CDS
TATGAAGTTGACAAATAAGT+TGG 0.354297 4.4:-16948471 None:intergenic
ATGCAAGCCATTTCTTCAAT+TGG 0.357005 4.4:+16951980 MS.gene023349:CDS
GCAAGCTCGCTGCGTAGCTC+GGG 0.363954 4.4:-16952769 None:intergenic
AGTTGCTATTGACCCTCTTA+AGG 0.364462 4.4:-16952387 None:intergenic
TTCATGCAAACTCCAGAAAA+TGG 0.365340 4.4:+16952514 MS.gene023349:CDS
ATATTGTGCAAAGGAGAAAC+TGG 0.366291 4.4:-16952037 None:intergenic
TGAACAGGAACCCAAGAGTT+TGG 0.366298 4.4:-16952112 None:intergenic
AAGAGGCATTTGCTTACAAC+AGG 0.373664 4.4:+16949273 MS.gene023349:CDS
GGTAGGGAGTGTGCTATAGA+AGG 0.374075 4.4:+16952283 MS.gene023349:CDS
GCCATAGCTTGGTACATATC+TGG 0.374274 4.4:-16951515 None:intergenic
AGATACATGGGAACAATAAC+TGG 0.380369 4.4:+16950560 MS.gene023349:intron
TATTCGCAGGTTTACAAGTC+AGG 0.381678 4.4:+16952703 MS.gene023349:intron
GACTTGAGTTGTAGGTTGGC+TGG 0.385986 4.4:+16950793 MS.gene023349:intron
ATGAAGTTGACAAATAAGTT+GGG 0.388997 4.4:-16948470 None:intergenic
CACACTCCCTACCAGGAAAT+GGG 0.390694 4.4:-16952273 None:intergenic
CTGCGTCTCGAAGCCACAAC+AGG 0.392277 4.4:-16951403 None:intergenic
GCTCGTATGTTTGGGCTTGA+AGG 0.392587 4.4:+16952790 MS.gene023349:CDS
GGGGAGGCAAGCTTGGATTT+GGG 0.394256 4.4:-16948450 None:intergenic
GCACACTCCCTACCAGGAAA+TGG 0.395718 4.4:-16952274 None:intergenic
CTTGTTTGTTTGCCAGCTGA+TGG 0.397601 4.4:+16947783 MS.gene023349:CDS
ATCTGGTTGCAAATTCATAA+TGG 0.399783 4.4:-16951498 None:intergenic
CCATGGAATGAAGGCAGTCC+TGG 0.403897 4.4:-16950933 None:intergenic
CTTAATGCTCGCAGGCTTGA+AGG 0.406288 4.4:+16951355 MS.gene023349:intron
ATGAGATGTCTAACCTTAAG+AGG 0.410321 4.4:+16952374 MS.gene023349:CDS
GCTGCGTAGCTCGGGGTAGT+TGG 0.412765 4.4:-16952761 None:intergenic
AAGGTGAGATGTTTCGTCAT+TGG 0.413056 4.4:-16952074 None:intergenic
GCTGATTCTTCTCTGAATCC+TGG 0.420963 4.4:+16952463 MS.gene023349:CDS
AAGGGATGGGTGTTAATCCT+TGG 0.424232 4.4:+16951453 MS.gene023349:CDS
AGATACCATTAGAGAGCCTC+TGG 0.425190 4.4:-16953162 None:intergenic
ACTTTCCTAGACCAAACTCT+TGG 0.427845 4.4:+16952101 MS.gene023349:CDS
AGGTTGCTGTATCTACCAAC+AGG 0.429734 4.4:+16948410 MS.gene023349:intron
GCAGCAATCTCAACCTCATC+AGG 0.429884 4.4:+16951664 MS.gene023349:CDS
GAAATGAAGCTTTCTTCAGC+TGG 0.431077 4.4:+16947388 None:intergenic
GAACTTTGGCATGCTTGTGC+TGG 0.433280 4.4:+16947756 MS.gene023349:CDS
AAGAAATGGCTTGCATGGGC+TGG 0.435175 4.4:-16951973 None:intergenic
GAAGCAGGATGCTGTTTAGA+AGG 0.435618 4.4:-16951572 None:intergenic
GGCATATCTTCCTGCAGAGT+TGG 0.437497 4.4:+16948810 MS.gene023349:CDS
ATAAGTTGGGGAGGCAAGCT+TGG 0.441494 4.4:-16948457 None:intergenic
GTTGTAAGCAAATGCCTCTT+CGG 0.441630 4.4:-16949270 None:intergenic
GTTTGGGCTTGAAGGTGAGT+TGG 0.444151 4.4:+16952798 MS.gene023349:CDS
TGTTAAAACCAAACAAAAGA+TGG 0.446571 4.4:-16952324 None:intergenic
CCCATTTGCTGCACTTCCTG+AGG 0.448578 4.4:-16953103 None:intergenic
TTGATGGCCAATTGAAGAAA+TGG 0.451631 4.4:-16951987 None:intergenic
GTTTACAAGTCAGGGTCCTT+CGG 0.452335 4.4:+16952712 MS.gene023349:CDS
AATTGAAGAAATGGCTTGCA+TGG 0.453786 4.4:-16951978 None:intergenic
ATTAAAGCAGCATTACCATT+GGG 0.454667 4.4:-16951626 None:intergenic
TCCACCTACTTGAATACAAC+AGG 0.455023 4.4:+16952439 MS.gene023349:CDS
CCAGGACTGCCTTCATTCCA+TGG 0.458099 4.4:+16950933 MS.gene023349:CDS
TTCTCCTCGGTGATGGTCCA+TGG 0.461154 4.4:+16952878 MS.gene023349:CDS
TACATTCTCATGCAGATACA+TGG 0.463139 4.4:+16950547 MS.gene023349:intron
TCCACAAGGTCACAGTGAAC+AGG 0.463370 4.4:+16947824 MS.gene023349:CDS
CCCTCAGGAAGTGCAGCAAA+TGG 0.463515 4.4:+16953102 MS.gene023349:CDS
CCTCAGGAAGTGCAGCAAAT+GGG 0.464104 4.4:+16953103 MS.gene023349:CDS
GCATATCTTCCTGCAGAGTT+GGG 0.465141 4.4:+16948811 MS.gene023349:CDS
CCAACCCAGAGGCTCTCTAA+TGG 0.466585 4.4:+16953157 MS.gene023349:CDS
CTGCCTCAAGTGGAGCAACT+AGG 0.466657 4.4:+16952208 MS.gene023349:CDS
ACACACGGCGTCGGTGAGTC+GGG 0.468905 4.4:+16952490 MS.gene023349:CDS
CTTTCCTAGACCAAACTCTT+GGG 0.472118 4.4:+16952102 MS.gene023349:CDS
GACACACGGCGTCGGTGAGT+CGG 0.474133 4.4:+16952489 MS.gene023349:CDS
TAAGCAAATGCCTCTTCGGC+TGG 0.475169 4.4:-16949266 None:intergenic
TTTGCAGTTCCCAACTCTGC+AGG 0.476648 4.4:-16948820 None:intergenic
AGAAATGGCTTGCATGGGCT+GGG 0.479926 4.4:-16951972 None:intergenic
GGGAATTTGTAAATAGTGTA+TGG 0.480304 4.4:+16953062 MS.gene023349:intron
GTGCAGCAGCTGCCATAGCT+TGG 0.481330 4.4:-16951526 None:intergenic
CCATTTGCTGCACTTCCTGA+GGG 0.482915 4.4:-16953102 None:intergenic
CTTAAAAGACCATGGCCTCC+AGG 0.488344 4.4:+16950915 MS.gene023349:CDS
TCAGCATCCATCTCAATCTC+AGG 0.490548 4.4:+16951709 MS.gene023349:CDS
TCGAGCCTTGCCTGCATCCA+AGG 0.490879 4.4:-16951470 None:intergenic
CCGACGCCGTGTGTCAATCC+AGG 0.491733 4.4:-16952481 None:intergenic
GCATGAATTCTCCCCTGTTG+TGG 0.492582 4.4:+16951390 MS.gene023349:CDS
CGTGCAGTTGAAGATTGAAC+AGG 0.494375 4.4:-16952127 None:intergenic
TCCCCTAGCGAAGTATGTTA+AGG 0.498659 4.4:+16949962 MS.gene023349:CDS
CTTTCCGATTCAGGCAGATA+CGG 0.499296 4.4:+16948639 MS.gene023349:intron
CTGCTGCACTTCAGGATATG+AGG 0.502048 4.4:+16951540 MS.gene023349:CDS
GACTCAAGAAATTTAAGCAC+CGG 0.503839 4.4:+16953208 MS.gene023349:CDS
CAGCCTTAACATACTTCGCT+AGG 0.504229 4.4:-16949965 None:intergenic
TGGCTTCGAGACGCAGATAG+AGG 0.506368 4.4:+16951410 MS.gene023349:CDS
AGGGTCCACTGCAACACGCT+TGG 0.506935 4.4:-16952155 None:intergenic
TCCGTGAGTGCTTGTATCAC+TGG 0.508076 4.4:-16948881 None:intergenic
AAACAGAGGAATCTAGTGTT+CGG 0.509576 4.4:+16950036 MS.gene023349:CDS
GATGTTCTTCTCCTCGGTGA+TGG 0.510947 4.4:+16952871 MS.gene023349:CDS
GAAGGCAGTCCTGGAGGCCA+TGG 0.511226 4.4:-16950924 None:intergenic
CTTGCAATCAACTCTTGAGC+AGG 0.511437 4.4:-16949055 None:intergenic
ACCACACGGCTTCCATCAGC+TGG 0.511446 4.4:-16947795 None:intergenic
TTGGTCTAGGAAAGTTGAGA+AGG 0.513336 4.4:-16952093 None:intergenic
ATGGGCTGGGTTGATTGAGA+TGG 0.514302 4.4:-16951959 None:intergenic
ACTTGAGTTGTAGGTTGGCT+GGG 0.515012 4.4:+16950794 MS.gene023349:intron
TCACTTGACAACACTGATGA+AGG 0.515777 4.4:-16949753 None:intergenic
CATCAAGATACTTTCCCCTC+AGG 0.517145 4.4:+16953087 MS.gene023349:CDS
AGTGCTAAAAGACTTGTTGC+TGG 0.517965 4.4:+16949312 MS.gene023349:CDS
AAATGAAGCTTTCTTCAGCT+GGG 0.519795 4.4:+16947389 None:intergenic
GCTGATGCTGAAGAAGCTGC+TGG 0.519888 4.4:-16951748 None:intergenic
TTGGAGGACCCTGTAAGATC+AGG 0.519960 4.4:+16952817 MS.gene023349:CDS
TGAAATTGAAGCAAGGAAGC+AGG 0.524510 4.4:-16951587 None:intergenic
GGAACCCAAGAGTTTGGTCT+AGG 0.525232 4.4:-16952106 None:intergenic
GCCTTCCAAGCGTGTTGCAG+TGG 0.529518 4.4:+16952150 MS.gene023349:CDS
GGGATTTGCATGGTAATGAC+TGG 0.530676 4.4:+16949077 MS.gene023349:CDS
GGTTGCAAATTCATAATGGA+TGG 0.532001 4.4:-16951494 None:intergenic
TGCCCTAGTTGCTCCACTTG+AGG 0.532182 4.4:-16952211 None:intergenic
GAGAATGATGTTCTTCTCCT+CGG 0.532335 4.4:+16952865 MS.gene023349:CDS
TGGGCTTGAAGGTGAGTTGG+AGG 0.533111 4.4:+16952801 MS.gene023349:CDS
ATGCTCCTGAAGAGAGGAGA+GGG 0.533115 4.4:-16952174 None:intergenic
TGCCTCAAGTGGAGCAACTA+GGG 0.534716 4.4:+16952209 MS.gene023349:CDS
CATTAAAGCAGCATTACCAT+TGG 0.538149 4.4:-16951627 None:intergenic
GGGTTCTAGATTCAGAACTT+TGG 0.538993 4.4:+16947742 MS.gene023349:CDS
GGCTGGGTTGATTGAGATGG+AGG 0.539093 4.4:-16951956 None:intergenic
GGGTGTTAATCCTTGGATGC+AGG 0.542296 4.4:+16951460 MS.gene023349:CDS
CAACTACCTTCTTGAGGTGG+AGG 0.543165 4.4:-16947418 None:intergenic
GGCTGGGATGAGTCTACAGC+AGG 0.544791 4.4:+16950810 MS.gene023349:CDS
TTAATCCTTGGATGCAGGCA+AGG 0.545851 4.4:+16951465 MS.gene023349:CDS
ACCTGTTCACTGTGACCTTG+TGG 0.547238 4.4:-16947825 None:intergenic
TTCACATTGGCGTTCAGTGA+AGG 0.548810 4.4:+16950616 MS.gene023349:CDS
TTGGCCACCGGACAGAATCC+AGG 0.549013 4.4:-16950592 None:intergenic
TCATTATGTTCTGCCTCAAG+TGG 0.551572 4.4:+16952198 MS.gene023349:CDS
TGCTCAAGAGTTGATTGCAA+GGG 0.552602 4.4:+16949057 MS.gene023349:CDS
TTAAATTTCTTGAGTCCTCA+CGG 0.552610 4.4:-16953201 None:intergenic
GTCAAGTGATAGCATGCACT+TGG 0.552772 4.4:+16949767 MS.gene023349:CDS
TCAAGTGATAGCATGCACTT+GGG 0.553043 4.4:+16949768 MS.gene023349:CDS
TCTATAGCACACTCCCTACC+AGG 0.553587 4.4:-16952280 None:intergenic
CTCAGGAAGTGCAGCAAATG+GGG 0.553810 4.4:+16953104 MS.gene023349:CDS
ACTCCAGAAAATGGAGGTCA+AGG 0.554636 4.4:+16952523 MS.gene023349:CDS
AAGTAGGTGGAAGATTGAAA+AGG 0.555292 4.4:-16952427 None:intergenic
TTTCTCCAGGCCAGCCGAAG+AGG 0.555501 4.4:+16949256 MS.gene023349:intron
AGGGGAATGACAAATTCTGA+TGG 0.555697 4.4:-16949945 None:intergenic
AGCACCGGGCTAACAACTGT+GGG 0.556315 4.4:+16953223 MS.gene023349:CDS
AATAACTGGCATCAGTGACC+TGG 0.557935 4.4:+16950574 MS.gene023349:CDS
CCATTAGAGAGCCTCTGGGT+TGG 0.558285 4.4:-16953157 None:intergenic
TCAGTGACCTGGATTCTGTC+CGG 0.561049 4.4:+16950585 MS.gene023349:CDS
AGCCTTAACATACTTCGCTA+GGG 0.561434 4.4:-16949964 None:intergenic
TCCACTGCAACACGCTTGGA+AGG 0.562459 4.4:-16952151 None:intergenic
ATTTCCCACAGAGATACTCT+AGG 0.563427 4.4:-16950843 None:intergenic
AGACCCCACAGTTGTTAGCC+CGG 0.563613 4.4:-16953227 None:intergenic
CAAGCTCGCTGCGTAGCTCG+GGG 0.569479 4.4:-16952768 None:intergenic
ACCAGATATGTACCAAGCTA+TGG 0.570485 4.4:+16951514 MS.gene023349:CDS
GGGAACGGAGATGGATACAT+TGG 0.570572 4.4:-16950885 None:intergenic
GAAATTCAACTACCTTCTTG+AGG 0.571278 4.4:-16947424 None:intergenic
AGGGTCCTTCGGAAGATCGT+TGG 0.572201 4.4:+16952723 MS.gene023349:CDS
ATATACATACCATGGAATGA+AGG 0.572440 4.4:-16950942 None:intergenic
GTTCAGAAGCTCTAGACCAT+TGG 0.572551 4.4:-16953128 None:intergenic
TACAGGATTTAAAGGTTGCA+AGG 0.574660 4.4:-16948689 None:intergenic
TATCATACTCGAGTTTCAGT+TGG 0.576668 4.4:+16949990 MS.gene023349:CDS
CTGCTCAAGAGTTGATTGCA+AGG 0.576835 4.4:+16949056 MS.gene023349:CDS
CCCTTAGGCTTAAAAGACCA+TGG 0.577894 4.4:+16950907 MS.gene023349:CDS
GTGCAGCAAATGGGGACCAA+TGG 0.578418 4.4:+16953112 MS.gene023349:CDS
ATTCGCAGGTTTACAAGTCA+GGG 0.579457 4.4:+16952704 MS.gene023349:intron
GCCAATGTGAATTTGGCCAC+CGG 0.581209 4.4:-16950604 None:intergenic
ATTGTAAACTAGATGTGATG+AGG 0.582412 4.4:-16952353 None:intergenic
TGAAGTTGACAAATAAGTTG+GGG 0.582623 4.4:-16948469 None:intergenic
ATGTGGAGTACTTACGGCCA+TGG 0.583406 4.4:-16952895 None:intergenic
CTGTTCAATCTTCAACTGCA+CGG 0.586537 4.4:+16952128 MS.gene023349:CDS
CTGAATCCTGGATTGACACA+CGG 0.591407 4.4:+16952475 MS.gene023349:CDS
GCCAGTGATACAAGCACTCA+CGG 0.594666 4.4:+16948880 MS.gene023349:CDS
ATAAGTATCAACTTCCCTGT+TGG 0.595354 4.4:-16948425 None:intergenic
TTCAGTCCTCCACCTCAAGA+AGG 0.597165 4.4:+16947412 MS.gene023349:CDS
GGCTTCGAGACGCAGATAGA+GGG 0.597637 4.4:+16951411 MS.gene023349:CDS
TGCGTCTCGAAGCCACAACA+GGG 0.598435 4.4:-16951402 None:intergenic
TTACCATTGGGGAAATTCTG+TGG 0.598510 4.4:-16951614 None:intergenic
GTTTGAGCCTGAGATTGAGA+TGG 0.599594 4.4:-16951716 None:intergenic
GGGGAATGACAAATTCTGAT+GGG 0.599780 4.4:-16949944 None:intergenic
GCAATCAACTCTTGAGCAGG+AGG 0.600892 4.4:-16949052 None:intergenic
CGTGTGGTTTACTTTCCACA+AGG 0.600967 4.4:+16947810 MS.gene023349:CDS
ATTCAACTACCTTCTTGAGG+TGG 0.602322 4.4:-16947421 None:intergenic
GAACCTAACATATTGTGCAA+AGG 0.604600 4.4:-16952046 None:intergenic
AAACTGAGACATTGTGGAGA+CGG 0.604719 4.4:-16951924 None:intergenic
GTAGGGAGTGTGCTATAGAA+GGG 0.607907 4.4:+16952284 MS.gene023349:CDS
ACCTGTTGTATTCAAGTAGG+TGG 0.609048 4.4:-16952440 None:intergenic
TTGATTGCAAGGGATTTGCA+TGG 0.612121 4.4:+16949067 MS.gene023349:CDS
GTGACAAATGTTACCAATGG+AGG 0.615770 4.4:-16948943 None:intergenic
AAGCACCGGGCTAACAACTG+TGG 0.618900 4.4:+16953222 MS.gene023349:CDS
TTGTAAACTAGATGTGATGA+GGG 0.620621 4.4:-16952352 None:intergenic
ACAAAACAAAACCTTTGTGA+AGG 0.621374 4.4:+16952552 MS.gene023349:CDS
TTCTTTGGAAAAGCCTGATG+AGG 0.623103 4.4:-16951677 None:intergenic
AATGAGATGCTCCTGAAGAG+AGG 0.623824 4.4:-16952180 None:intergenic
CACTCCCTACCAGGAAATGG+GGG 0.625279 4.4:-16952271 None:intergenic
TTAAAGCAGCATTACCATTG+GGG 0.625568 4.4:-16951625 None:intergenic
ACTCAAGAAATTTAAGCACC+GGG 0.627306 4.4:+16953209 MS.gene023349:CDS
ACACTCCCTACCAGGAAATG+GGG 0.632565 4.4:-16952272 None:intergenic
AGGACCCTGTAAGATCAGGC+TGG 0.634660 4.4:+16952821 MS.gene023349:CDS
ACATTCTCATGCAGATACAT+GGG 0.635397 4.4:+16950548 MS.gene023349:intron
TGAGATGTCTAACCTTAAGA+GGG 0.641318 4.4:+16952375 MS.gene023349:CDS
AAATTCAAACATATCTTCCG+TGG 0.642080 4.4:+16949100 MS.gene023349:CDS
ATGAGTCTACAGCAGGTGAG+AGG 0.642295 4.4:+16950817 MS.gene023349:CDS
TCCGGTGGCCAAATTCACAT+TGG 0.644001 4.4:+16950603 MS.gene023349:CDS
TGGCTGCTGAAATTGAAGCA+AGG 0.648136 4.4:-16951594 None:intergenic
GGCATTTGCTTACAACAGGG+TGG 0.648334 4.4:+16949277 MS.gene023349:CDS
GCCTTAACATACTTCGCTAG+GGG 0.649114 4.4:-16949963 None:intergenic
CGGAGATGGATACATTGGAA+AGG 0.649481 4.4:-16950880 None:intergenic
ATTGAAGAAATGGCTTGCAT+GGG 0.649927 4.4:-16951977 None:intergenic
TCAGCTGGCAAACAAACAAG+AGG 0.650775 4.4:-16947780 None:intergenic
TATTGTGCAAAGGAGAAACT+GGG 0.652854 4.4:-16952036 None:intergenic
AGTTGACAAATAAGTTGGGG+AGG 0.654219 4.4:-16948466 None:intergenic
GTGACCTGGATTCTGTCCGG+TGG 0.655061 4.4:+16950588 MS.gene023349:CDS
AGCACCTGTTGTATTCAAGT+AGG 0.655572 4.4:-16952443 None:intergenic
CCTGGATTGACACACGGCGT+CGG 0.655958 4.4:+16952481 MS.gene023349:CDS
GCTGCCAGCCTGATCTTACA+GGG 0.660689 4.4:-16952825 None:intergenic
GCAACCTAGAGTATCTCTGT+GGG 0.661759 4.4:+16950839 MS.gene023349:CDS
GATATCCAACGATCTTCCGA+AGG 0.662259 4.4:-16952728 None:intergenic
CAGCCACAGAATTTCCCCAA+TGG 0.663679 4.4:+16951611 MS.gene023349:CDS
GGCAACCTAGAGTATCTCTG+TGG 0.664195 4.4:+16950838 MS.gene023349:CDS
ATGCAAACTCCAGAAAATGG+AGG 0.664767 4.4:+16952517 MS.gene023349:CDS
CATTTGCTGCACTTCCTGAG+GGG 0.665248 4.4:-16953101 None:intergenic
TGGAATGAAGGCAGTCCTGG+AGG 0.674670 4.4:-16950930 None:intergenic
GATGCTCCTGAAGAGAGGAG+AGG 0.678168 4.4:-16952175 None:intergenic
GCCAGCTGATGGAAGCCGTG+TGG 0.680240 4.4:+16947794 MS.gene023349:CDS
GATACCATTAGAGAGCCTCT+GGG 0.685450 4.4:-16953161 None:intergenic
CAGAGGAATCTAGTGTTCGG+CGG 0.695262 4.4:+16950039 MS.gene023349:CDS
GGAAACAAACTGAGACATTG+TGG 0.695886 4.4:-16951930 None:intergenic
GGTATCTGTGATGACTACAC+TGG 0.700699 4.4:+16953178 MS.gene023349:CDS
CTTGTGGAAAGTAAACCACA+CGG 0.702035 4.4:-16947809 None:intergenic
CAAGTGATAGCATGCACTTG+GGG 0.704154 4.4:+16949769 MS.gene023349:CDS
TGAACTCAGCTCCAACCCAG+AGG 0.710806 4.4:+16953146 MS.gene023349:CDS
AGAGGCATTTGCTTACAACA+GGG 0.723052 4.4:+16949274 MS.gene023349:CDS
GATGAAGGCATCATATGTTG+TGG 0.726564 4.4:-16949738 None:intergenic
GCGTCTCGAAGCCACAACAG+GGG 0.732410 4.4:-16951401 None:intergenic
GGTTGATTGAGATGGAGGTG+CGG 0.732986 4.4:-16951951 None:intergenic
TGATGACTACACTGGCCGTG+AGG 0.736330 4.4:+16953186 MS.gene023349:CDS
GGTTGCTGTATCTACCAACA+GGG 0.736678 4.4:+16948411 MS.gene023349:intron
GCACCGGGCTAACAACTGTG+GGG 0.750709 4.4:+16953224 MS.gene023349:CDS
ACGGCCATGGACCATCACCG+AGG 0.789227 4.4:-16952882 None:intergenic
AGTGATACAAGCACTCACGG+AGG 0.828898 4.4:+16948883 MS.gene023349:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAATAATAATAATAAT+TGG + chr4.4:16947940-16947959 MS.gene023349:intron 0.0%
!! ATCAATGAAATATATTATAA+AGG - chr4.4:16950654-16950673 None:intergenic 10.0%
!! GTAAAAAAATAAAAAATAAG+AGG - chr4.4:16949152-16949171 None:intergenic 10.0%
!! TAATTGTGATATTATATAAT+TGG + chr4.4:16949639-16949658 MS.gene023349:intron 10.0%
!!! AAAAGTTCTTAAATATTTTT+TGG - chr4.4:16950981-16951000 None:intergenic 10.0%
!!! AAGAATTTTTCTATTAAATT+AGG - chr4.4:16950205-16950224 None:intergenic 10.0%
!!! TAACAATTTTTTTTCATTTT+GGG + chr4.4:16947498-16947517 MS.gene023349:intron 10.0%
!! AAAAAAAATTGTTACCAAAA+AGG - chr4.4:16947492-16947511 None:intergenic 15.0%
!! AAAAAATTAAACAAAGAACA+AGG - chr4.4:16952927-16952946 None:intergenic 15.0%
!! AACTAATAGAAATATATGAT+AGG - chr4.4:16949865-16949884 None:intergenic 15.0%
!! TAATAATGAAAGAGATAAAT+TGG + chr4.4:16952946-16952965 MS.gene023349:intron 15.0%
!! TTGTATGTCTAATAATAATA+TGG + chr4.4:16947575-16947594 MS.gene023349:intron 15.0%
!!! AACAATTTTTTTTCATTTTG+GGG + chr4.4:16947499-16947518 MS.gene023349:intron 15.0%
!!! GTAACAATTTTTTTTCATTT+TGG + chr4.4:16947497-16947516 MS.gene023349:intron 15.0%
!!! TGAATAAACATTTTTAATTG+TGG + chr4.4:16950766-16950785 MS.gene023349:intron 15.0%
!! AAAGCTAGATTAATTGATTA+TGG - chr4.4:16951273-16951292 None:intergenic 20.0%
!! AAGAAATGAACAAATTGTTA+AGG - chr4.4:16948622-16948641 None:intergenic 20.0%
!! AGAATAAGTAGATTAGTAAA+AGG - chr4.4:16951321-16951340 None:intergenic 20.0%
!! ATAATTGTTGAAAATGATAG+TGG + chr4.4:16950072-16950091 MS.gene023349:intron 20.0%
!! CCAAATTTAAACCTTATAAA+TGG - chr4.4:16949229-16949248 None:intergenic 20.0%
!! CCATTTATAAGGTTTAAATT+TGG + chr4.4:16949226-16949245 MS.gene023349:intron 20.0%
!! TATATAATTGGTGTGATTTA+TGG + chr4.4:16949651-16949670 MS.gene023349:intron 20.0%
!! TATGTCTAATAATAATATGG+TGG + chr4.4:16947578-16947597 MS.gene023349:intron 20.0%
!!! AAGAACTTTTCTTACTATTT+AGG + chr4.4:16950991-16951010 MS.gene023349:intron 20.0%
!!! AATATTTTTTGGCTTAAATG+TGG - chr4.4:16950970-16950989 None:intergenic 20.0%
!!! ACATTCAACTTTTTAACTTT+TGG + chr4.4:16948755-16948774 MS.gene023349:intron 20.0%
!!! GATATTATTGATGTTTTGTT+TGG - chr4.4:16950713-16950732 None:intergenic 20.0%
!!! TATTATTTTTTAACACACCA+TGG - chr4.4:16947932-16947951 None:intergenic 20.0%
!!! TTTTCTTATGTTTGAAATGT+TGG + chr4.4:16950105-16950124 MS.gene023349:intron 20.0%
! AAAGTTCCTTTATCATTTGT+GGG + chr4.4:16947646-16947665 MS.gene023349:intron 25.0%
! AAGACTAAATTTGAGTCAAA+AGG - chr4.4:16950351-16950370 None:intergenic 25.0%
! AAGTTCACATTCCATTTATA+AGG + chr4.4:16949215-16949234 MS.gene023349:intron 25.0%
! ACATCAATAATATCTTGCTT+CGG + chr4.4:16950719-16950738 MS.gene023349:intron 25.0%
! AGTGAGATAAAGTAAGAATA+TGG + chr4.4:16950397-16950416 MS.gene023349:intron 25.0%
! ATGAAGTTGACAAATAAGTT+GGG - chr4.4:16948473-16948492 None:intergenic 25.0%
! ATGGTTTGAAAAACAAGTAT+TGG - chr4.4:16947913-16947932 None:intergenic 25.0%
! ATTAGTTCCAAGTTAGAATA+TGG + chr4.4:16949878-16949897 MS.gene023349:intron 25.0%
! GTTAAGCATTAGTATAAACA+CGG - chr4.4:16948202-16948221 None:intergenic 25.0%
! TATGAAGTTGACAAATAAGT+TGG - chr4.4:16948474-16948493 None:intergenic 25.0%
! TGATTAAATTCATCATTGAG+TGG + chr4.4:16950477-16950496 MS.gene023349:intron 25.0%
! TGTTAAAACCAAACAAAAGA+TGG - chr4.4:16952327-16952346 None:intergenic 25.0%
! TTAAGCATTAGTATAAACAC+GGG - chr4.4:16948201-16948220 None:intergenic 25.0%
! TTATCCTATATTCTTCTGAA+TGG - chr4.4:16949470-16949489 None:intergenic 25.0%
!! AGAATCTATTTTCAATCGAA+TGG + chr4.4:16952969-16952988 MS.gene023349:intron 25.0%
!! AGCTTTTCATGTTTATTACT+TGG + chr4.4:16949182-16949201 MS.gene023349:intron 25.0%
!! ATGTTTGAAATGTTGGTTAA+TGG + chr4.4:16950112-16950131 MS.gene023349:intron 25.0%
!! TATGTCTGAAATTTAACCTT+TGG + chr4.4:16949378-16949397 MS.gene023349:intron 25.0%
!! TGTTTCATATTGATGACATT+AGG + chr4.4:16947694-16947713 MS.gene023349:intron 25.0%
!! TTCAGACTCTTAATTTTCAA+GGG + chr4.4:16951435-16951454 MS.gene023349:CDS 25.0%
!! TTTCGTAGTTTTTCTAATCT+AGG + chr4.4:16949590-16949609 MS.gene023349:intron 25.0%
!! TTTTCATGTTTATTACTTGG+TGG + chr4.4:16949185-16949204 MS.gene023349:intron 25.0%
!!! AATACTTGTTTTTCAAACCA+TGG + chr4.4:16947912-16947931 MS.gene023349:intron 25.0%
!!! ATTAGGATGCATTTTTTTGT+AGG + chr4.4:16947711-16947730 MS.gene023349:intron 25.0%
!!! ATTTATGGTGCTTTTTTCTT+TGG + chr4.4:16949666-16949685 MS.gene023349:intron 25.0%
!!! ATTTTGCAAAAGTAGTTTGT+TGG - chr4.4:16948853-16948872 None:intergenic 25.0%
!!! ATTTTTTTGTAGGAGAAAAG+CGG + chr4.4:16947721-16947740 MS.gene023349:intron 25.0%
AAAGGATTGAGAAAGTGAAA+TGG - chr4.4:16947474-16947493 None:intergenic 30.0%
AAATTCAAACATATCTTCCG+TGG + chr4.4:16949100-16949119 MS.gene023349:CDS 30.0%
AAGAGTGAAAATCAAGATGT+TGG - chr4.4:16952612-16952631 None:intergenic 30.0%
AATAAGCTGAAAACAACTCA+TGG + chr4.4:16951156-16951175 MS.gene023349:intron 30.0%
AATATATGATAGGTATACCG+TGG - chr4.4:16949855-16949874 None:intergenic 30.0%
AATTTAATCTCTCTATTCGC+AGG + chr4.4:16952690-16952709 MS.gene023349:intron 30.0%
ACAAAACAAAACCTTTGTGA+AGG + chr4.4:16952552-16952571 MS.gene023349:CDS 30.0%
ACAAATCGAAGACATGAAAA+AGG - chr4.4:16947968-16947987 None:intergenic 30.0%
ACATATTTGAGCTTATCTAC+TGG - chr4.4:16951237-16951256 None:intergenic 30.0%
ACGTTACTCAAATTCAATTC+AGG + chr4.4:16950252-16950271 MS.gene023349:intron 30.0%
ACTTCATAATTATGACCTAC+AGG + chr4.4:16949015-16949034 MS.gene023349:intron 30.0%
ATAATCTGACTATGCATGTA+AGG + chr4.4:16948491-16948510 MS.gene023349:intron 30.0%
ATATACATACCATGGAATGA+AGG - chr4.4:16950945-16950964 None:intergenic 30.0%
ATATATGATAGGTATACCGT+GGG - chr4.4:16949854-16949873 None:intergenic 30.0%
ATCTGGTTGCAAATTCATAA+TGG - chr4.4:16951501-16951520 None:intergenic 30.0%
ATTAAACAAAGAACAAGGCA+AGG - chr4.4:16952922-16952941 None:intergenic 30.0%
ATTAAAGCAGCATTACCATT+GGG - chr4.4:16951629-16951648 None:intergenic 30.0%
ATTGTAAACTAGATGTGATG+AGG - chr4.4:16952356-16952375 None:intergenic 30.0%
CAAAGTTCCTTTATCATTTG+TGG + chr4.4:16947645-16947664 MS.gene023349:intron 30.0%
CAATTCAGGATATGGAATTA+CGG + chr4.4:16950266-16950285 MS.gene023349:intron 30.0%
CACAAATGATAAAGGAACTT+TGG - chr4.4:16947647-16947666 None:intergenic 30.0%
CTCAAATTCAATTCAGGATA+TGG + chr4.4:16950258-16950277 MS.gene023349:intron 30.0%
CTCAGATTTATAACTTACCA+CGG - chr4.4:16949120-16949139 None:intergenic 30.0%
CTTAAACCCACAAATGATAA+AGG - chr4.4:16947655-16947674 None:intergenic 30.0%
CTTAACTGAAACCAGATATT+TGG + chr4.4:16948723-16948742 MS.gene023349:intron 30.0%
CTTTATCATTTGTGGGTTTA+AGG + chr4.4:16947653-16947672 MS.gene023349:intron 30.0%
GAAAAAAATCAGTTGCTTCT+AGG + chr4.4:16949696-16949715 MS.gene023349:CDS 30.0%
GGGAATTTGTAAATAGTGTA+TGG + chr4.4:16953062-16953081 MS.gene023349:intron 30.0%
TAAGTAGCCATATTCTAACT+TGG - chr4.4:16949888-16949907 None:intergenic 30.0%
TACATTGGAAAGGTTGTTAA+TGG - chr4.4:16950873-16950892 None:intergenic 30.0%
TGAAGTTGACAAATAAGTTG+GGG - chr4.4:16948472-16948491 None:intergenic 30.0%
TTAAATTTCTTGAGTCCTCA+CGG - chr4.4:16953204-16953223 None:intergenic 30.0%
TTAATTGATTATGGTCTGCT+AGG - chr4.4:16951264-16951283 None:intergenic 30.0%
TTAGATTTAGATGATTGCTG+AGG + chr4.4:16947544-16947563 MS.gene023349:intron 30.0%
TTATCTAGACGTGTCATAAA+TGG + chr4.4:16950305-16950324 MS.gene023349:intron 30.0%
TTGTAAACTAGATGTGATGA+GGG - chr4.4:16952355-16952374 None:intergenic 30.0%
TTTGCCATTCAGAAGAATAT+AGG + chr4.4:16949463-16949482 MS.gene023349:intron 30.0%
! AAAACTTTTCGGACTCAAAT+GGG + chr4.4:16952011-16952030 MS.gene023349:CDS 30.0%
! ATATGTGAGAGTATGAAACA+AGG - chr4.4:16948578-16948597 None:intergenic 30.0%
! ATCTGGTTTCAGTTAAGAAA+TGG - chr4.4:16948720-16948739 None:intergenic 30.0%
! CTTCAGACTCTTAATTTTCA+AGG + chr4.4:16951434-16951453 MS.gene023349:CDS 30.0%
! TTCAACAGTGATTTTTCTCT+AGG - chr4.4:16947885-16947904 None:intergenic 30.0%
! TTCACTTTCTCAATCCTTTT+TGG + chr4.4:16947475-16947494 MS.gene023349:intron 30.0%
! TTGGCTATTACAATGTTTTC+AGG + chr4.4:16948774-16948793 MS.gene023349:intron 30.0%
!! ACTCTTAATTTTCAAGGGAT+GGG + chr4.4:16951440-16951459 MS.gene023349:CDS 30.0%
!!! TCACAAAGGTTTTGTTTTGT+GGG - chr4.4:16952552-16952571 None:intergenic 30.0%
!!! TTCACAAAGGTTTTGTTTTG+TGG - chr4.4:16952553-16952572 None:intergenic 30.0%
!!! TTTTTTTGTAGGAGAAAAGC+GGG + chr4.4:16947722-16947741 MS.gene023349:intron 30.0%
AAACAGAGGAATCTAGTGTT+CGG + chr4.4:16950036-16950055 MS.gene023349:CDS 35.0%
AACAGTTAGTGTTTGTGCTT+AGG - chr4.4:16948230-16948249 None:intergenic 35.0%
AAGGCCAATTTGACAAAATC+AGG - chr4.4:16948114-16948133 None:intergenic 35.0%
AAGTAGGTGGAAGATTGAAA+AGG - chr4.4:16952430-16952449 None:intergenic 35.0%
ACAGTGACAAATGTTACCAA+TGG - chr4.4:16948949-16948968 None:intergenic 35.0%
ACATTCTCATGCAGATACAT+GGG + chr4.4:16950548-16950567 MS.gene023349:intron 35.0%
ACGACGTTTATGTAATTCAG+TGG - chr4.4:16953007-16953026 None:intergenic 35.0%
ACTCAAGAAATTTAAGCACC+GGG + chr4.4:16953209-16953228 MS.gene023349:CDS 35.0%
AGATACATGGGAACAATAAC+TGG + chr4.4:16950560-16950579 MS.gene023349:intron 35.0%
ATAAGTATCAACTTCCCTGT+TGG - chr4.4:16948428-16948447 None:intergenic 35.0%
ATATTGTGCAAAGGAGAAAC+TGG - chr4.4:16952040-16952059 None:intergenic 35.0%
ATCAGTTGCTTCTAGGTATT+CGG + chr4.4:16949703-16949722 MS.gene023349:CDS 35.0%
ATCTTTATAGAATGCACGCT+TGG - chr4.4:16950456-16950475 None:intergenic 35.0%
ATGAGATGTCTAACCTTAAG+AGG + chr4.4:16952374-16952393 MS.gene023349:CDS 35.0%
ATGCAAGCCATTTCTTCAAT+TGG + chr4.4:16951980-16951999 MS.gene023349:CDS 35.0%
ATGCACTTGTAAGACTGTTT+GGG - chr4.4:16951211-16951230 None:intergenic 35.0%
ATGTGGCAATATACATACCA+TGG - chr4.4:16950953-16950972 None:intergenic 35.0%
CATTAAAGCAGCATTACCAT+TGG - chr4.4:16951630-16951649 None:intergenic 35.0%
CTTACTATTTAGGCTCTGTT+TGG + chr4.4:16951001-16951020 MS.gene023349:intron 35.0%
GAAACCAGATATTTGGACTA+TGG + chr4.4:16948730-16948749 MS.gene023349:intron 35.0%
GAAATTCAACTACCTTCTTG+AGG - chr4.4:16947427-16947446 None:intergenic 35.0%
GAACCTAACATATTGTGCAA+AGG - chr4.4:16952049-16952068 None:intergenic 35.0%
GACTCAAGAAATTTAAGCAC+CGG + chr4.4:16953208-16953227 MS.gene023349:CDS 35.0%
GGCTATGACTTATGATAACT+TGG - chr4.4:16950184-16950203 None:intergenic 35.0%
GTTAAGAAATGGAACCATAC+AGG - chr4.4:16948709-16948728 None:intergenic 35.0%
TAAAAAGCTCACCTTCACAA+AGG - chr4.4:16952566-16952585 None:intergenic 35.0%
TACAGGATTTAAAGGTTGCA+AGG - chr4.4:16948692-16948711 None:intergenic 35.0%
TACATTCTCATGCAGATACA+TGG + chr4.4:16950547-16950566 MS.gene023349:intron 35.0%
TATCATACTCGAGTTTCAGT+TGG + chr4.4:16949990-16950009 MS.gene023349:CDS 35.0%
TATCATTTGTGGGTTTAAGG+TGG + chr4.4:16947656-16947675 MS.gene023349:intron 35.0%
TATTGTGCAAAGGAGAAACT+GGG - chr4.4:16952039-16952058 None:intergenic 35.0%
TCTCCTTTGCACAATATGTT+AGG + chr4.4:16952043-16952062 MS.gene023349:CDS 35.0%
TCTTTATAGAATGCACGCTT+GGG - chr4.4:16950455-16950474 None:intergenic 35.0%
TGAAAAAGTCTTTCCTCCAT+TGG + chr4.4:16948930-16948949 MS.gene023349:CDS 35.0%
TGAGATGTCTAACCTTAAGA+GGG + chr4.4:16952375-16952394 MS.gene023349:CDS 35.0%
TGATCCAATGTTCCATCAAT+GGG + chr4.4:16949532-16949551 MS.gene023349:intron 35.0%
TGCAACCTTTAAATCCTGTA+TGG + chr4.4:16948692-16948711 MS.gene023349:intron 35.0%
TGGAACCATACAGGATTTAA+AGG - chr4.4:16948700-16948719 None:intergenic 35.0%
TGTTCATTTCTTTCCGATTC+AGG + chr4.4:16948630-16948649 MS.gene023349:intron 35.0%
TTAAAGCAGCATTACCATTG+GGG - chr4.4:16951628-16951647 None:intergenic 35.0%
TTCATGCAAACTCCAGAAAA+TGG + chr4.4:16952514-16952533 MS.gene023349:CDS 35.0%
TTGATCCAATGTTCCATCAA+TGG + chr4.4:16949531-16949550 MS.gene023349:intron 35.0%
TTGTGTCTTTGTGATGCAAT+GGG + chr4.4:16947984-16948003 MS.gene023349:intron 35.0%
TTTAACCTTTGGCAGTTAAG+TGG + chr4.4:16949389-16949408 MS.gene023349:intron 35.0%
TTTGTGTCTTTGTGATGCAA+TGG + chr4.4:16947983-16948002 MS.gene023349:intron 35.0%
! AAATCTGCAATTTTCTGCTC+AGG + chr4.4:16948390-16948409 MS.gene023349:intron 35.0%
! AATTGAAGAAATGGCTTGCA+TGG - chr4.4:16951981-16952000 None:intergenic 35.0%
! ATACCGTGGGTTATAGAAAA+TGG - chr4.4:16949841-16949860 None:intergenic 35.0%
! ATCATTTGTGGGTTTAAGGT+GGG + chr4.4:16947657-16947676 MS.gene023349:intron 35.0%
! ATTGAAGAAATGGCTTGCAT+GGG - chr4.4:16951980-16951999 None:intergenic 35.0%
! CAAAACTTTTCGGACTCAAA+TGG + chr4.4:16952010-16952029 MS.gene023349:CDS 35.0%
! CCACAAAACCATCTTTTGTT+TGG + chr4.4:16952316-16952335 MS.gene023349:CDS 35.0%
! GGTTGCAAATTCATAATGGA+TGG - chr4.4:16951497-16951516 None:intergenic 35.0%
! GTGTAGCTTTTGCTAAAATC+AGG - chr4.4:16948062-16948081 None:intergenic 35.0%
! TCACCATTTTCTATAACCCA+CGG + chr4.4:16949835-16949854 MS.gene023349:CDS 35.0%
! TGGCCATCAACAAAACTTTT+CGG + chr4.4:16952000-16952019 MS.gene023349:CDS 35.0%
! TTGATGGCCAATTGAAGAAA+TGG - chr4.4:16951990-16952009 None:intergenic 35.0%
! TTGTTAAGGAAAAAGAGTGC+TGG - chr4.4:16948608-16948627 None:intergenic 35.0%
!! ATAAACACGGGTCATTTTAG+TGG - chr4.4:16948189-16948208 None:intergenic 35.0%
!! ATGTTTTCAGGAAGAGCAAA+AGG + chr4.4:16948786-16948805 MS.gene023349:intron 35.0%
!! ATTTGACTTGAGTTGTAGGT+TGG + chr4.4:16950789-16950808 MS.gene023349:intron 35.0%
!! CCAAACAAAAGATGGTTTTG+TGG - chr4.4:16952319-16952338 None:intergenic 35.0%
!! GACTCTTAATTTTCAAGGGA+TGG + chr4.4:16951439-16951458 MS.gene023349:CDS 35.0%
!! GTGATTCAGTGCTGTTTATA+TGG + chr4.4:16949334-16949353 MS.gene023349:CDS 35.0%
!! TGCTGACTTTCTTGATTCTT+TGG - chr4.4:16951695-16951714 None:intergenic 35.0%
!!! AGTCCGAAAAGTTTTGTTGA+TGG - chr4.4:16952006-16952025 None:intergenic 35.0%
!!! CAAAAGATGGTTTTGTGGAT+CGG - chr4.4:16952314-16952333 None:intergenic 35.0%
AAACTGAGACATTGTGGAGA+CGG - chr4.4:16951927-16951946 None:intergenic 40.0%
AAAGAACAAGGCAAGGAATG+TGG - chr4.4:16952915-16952934 None:intergenic 40.0%
AAGGTGAGATGTTTCGTCAT+TGG - chr4.4:16952077-16952096 None:intergenic 40.0%
ACCAGATATGTACCAAGCTA+TGG + chr4.4:16951514-16951533 MS.gene023349:CDS 40.0%
ACCTGTTGTATTCAAGTAGG+TGG - chr4.4:16952443-16952462 None:intergenic 40.0%
ACTGAACGCCAATGTGAATT+TGG - chr4.4:16950614-16950633 None:intergenic 40.0%
ACTTGTAAGACTGTTTGGGA+GGG - chr4.4:16951207-16951226 None:intergenic 40.0%
ACTTTCCTAGACCAAACTCT+TGG + chr4.4:16952101-16952120 MS.gene023349:CDS 40.0%
AGATATTGTCAGTCACACGT+TGG + chr4.4:16950502-16950521 MS.gene023349:intron 40.0%
AGCACCTGTTGTATTCAAGT+AGG - chr4.4:16952446-16952465 None:intergenic 40.0%
AGCCTTAACATACTTCGCTA+GGG - chr4.4:16949967-16949986 None:intergenic 40.0%
AGGGGAATGACAAATTCTGA+TGG - chr4.4:16949948-16949967 None:intergenic 40.0%
ATATTGTCAGTCACACGTTG+GGG + chr4.4:16950504-16950523 MS.gene023349:intron 40.0%
ATGCAAACTCCAGAAAATGG+AGG + chr4.4:16952517-16952536 MS.gene023349:CDS 40.0%
ATTCAACTACCTTCTTGAGG+TGG - chr4.4:16947424-16947443 None:intergenic 40.0%
ATTCCAAACATACAAGCGAC+GGG + chr4.4:16948135-16948154 MS.gene023349:intron 40.0%
ATTCGCAGGTTTACAAGTCA+GGG + chr4.4:16952704-16952723 MS.gene023349:intron 40.0%
ATTTCCCACAGAGATACTCT+AGG - chr4.4:16950846-16950865 None:intergenic 40.0%
CACTGAGTTTGGCAGAATTA+CGG + chr4.4:16948032-16948051 MS.gene023349:intron 40.0%
CATGCACTTGTAAGACTGTT+TGG - chr4.4:16951212-16951231 None:intergenic 40.0%
CTGTTCAATCTTCAACTGCA+CGG + chr4.4:16952128-16952147 MS.gene023349:CDS 40.0%
CTTGTGGAAAGTAAACCACA+CGG - chr4.4:16947812-16947831 None:intergenic 40.0%
CTTTCCTAGACCAAACTCTT+GGG + chr4.4:16952102-16952121 MS.gene023349:CDS 40.0%
GAGAATGATGTTCTTCTCCT+CGG + chr4.4:16952865-16952884 MS.gene023349:CDS 40.0%
GATATTGTCAGTCACACGTT+GGG + chr4.4:16950503-16950522 MS.gene023349:intron 40.0%
GATTCCAAACATACAAGCGA+CGG + chr4.4:16948134-16948153 MS.gene023349:intron 40.0%
GCCAATTTGACAAAATCAGG+TGG - chr4.4:16948111-16948130 None:intergenic 40.0%
GGAAACAAACTGAGACATTG+TGG - chr4.4:16951933-16951952 None:intergenic 40.0%
GGGGAATGACAAATTCTGAT+GGG - chr4.4:16949947-16949966 None:intergenic 40.0%
GTAGCCATAGTCCAAATATC+TGG - chr4.4:16948737-16948756 None:intergenic 40.0%
GTGACAAATGTTACCAATGG+AGG - chr4.4:16948946-16948965 None:intergenic 40.0%
GTTGTAAGCAAATGCCTCTT+CGG - chr4.4:16949273-16949292 None:intergenic 40.0%
TATTCGCAGGTTTACAAGTC+AGG + chr4.4:16952703-16952722 MS.gene023349:intron 40.0%
TCAAGTGATAGCATGCACTT+GGG + chr4.4:16949768-16949787 MS.gene023349:CDS 40.0%
TCACTTGACAACACTGATGA+AGG - chr4.4:16949756-16949775 None:intergenic 40.0%
TCATTATGTTCTGCCTCAAG+TGG + chr4.4:16952198-16952217 MS.gene023349:CDS 40.0%
TCCACCTACTTGAATACAAC+AGG + chr4.4:16952439-16952458 MS.gene023349:CDS 40.0%
TGAAATTGAAGCAAGGAAGC+AGG - chr4.4:16951590-16951609 None:intergenic 40.0%
TGCAAATTGCAACTGTAGTG+TGG + chr4.4:16949556-16949575 MS.gene023349:intron 40.0%
TGCAATTTGCAACCCATTGA+TGG - chr4.4:16949547-16949566 None:intergenic 40.0%
TTACCATTGGGGAAATTCTG+TGG - chr4.4:16951617-16951636 None:intergenic 40.0%
TTGATTGCAAGGGATTTGCA+TGG + chr4.4:16949067-16949086 MS.gene023349:CDS 40.0%
TTGGTCTAGGAAAGTTGAGA+AGG - chr4.4:16952096-16952115 None:intergenic 40.0%
! AACTTTTGTGAAACGCAACG+TGG - chr4.4:16952638-16952657 None:intergenic 40.0%
! AGTTGACAAATAAGTTGGGG+AGG - chr4.4:16948469-16948488 None:intergenic 40.0%
! AGTTGCTATTGACCCTCTTA+AGG - chr4.4:16952390-16952409 None:intergenic 40.0%
! ATGGTCTTTTAAGCCTAAGG+GGG - chr4.4:16950908-16950927 None:intergenic 40.0%
! CAAGGAATGTGGAGTACTTA+CGG - chr4.4:16952904-16952923 None:intergenic 40.0%
! CATGGTCTTTTAAGCCTAAG+GGG - chr4.4:16950909-16950928 None:intergenic 40.0%
! CCATGGTCTTTTAAGCCTAA+GGG - chr4.4:16950910-16950929 None:intergenic 40.0%
! CGCTTGTATGTTTGGAATCA+AGG - chr4.4:16948133-16948152 None:intergenic 40.0%
! CGTTCAGTGAAGGTATGTAT+TGG + chr4.4:16950626-16950645 MS.gene023349:intron 40.0%
! GAAGGTGAGCTTTTTATGCT+GGG + chr4.4:16952570-16952589 MS.gene023349:intron 40.0%
! GCCACCTGATTTTGTCAAAT+TGG + chr4.4:16948107-16948126 MS.gene023349:intron 40.0%
! GGCTTGAAGGATGATGATTT+TGG + chr4.4:16951368-16951387 MS.gene023349:intron 40.0%
! GGGCTGCTAATTTGTATGTT+CGG + chr4.4:16948004-16948023 MS.gene023349:intron 40.0%
! TGAAGGTGAGCTTTTTATGC+TGG + chr4.4:16952569-16952588 MS.gene023349:intron 40.0%
! TGCTCAAGAGTTGATTGCAA+GGG + chr4.4:16949057-16949076 MS.gene023349:CDS 40.0%
! TTTCCTTGACCTCCATTTTC+TGG - chr4.4:16952529-16952548 None:intergenic 40.0%
!! AAGAGGCATTTGCTTACAAC+AGG + chr4.4:16949273-16949292 MS.gene023349:CDS 40.0%
!! AGAGGCATTTGCTTACAACA+GGG + chr4.4:16949274-16949293 MS.gene023349:CDS 40.0%
!! AGTGCTAAAAGACTTGTTGC+TGG + chr4.4:16949312-16949331 MS.gene023349:CDS 40.0%
!! CTTGTTGTCGCGTGATATTT+TGG + chr4.4:16953033-16953052 MS.gene023349:intron 40.0%
!! GATGAAGGCATCATATGTTG+TGG - chr4.4:16949741-16949760 None:intergenic 40.0%
!! GCGTGATATTTTGGATGACA+GGG + chr4.4:16953042-16953061 MS.gene023349:intron 40.0%
!! GGGTTCTAGATTCAGAACTT+TGG + chr4.4:16947742-16947761 MS.gene023349:CDS 40.0%
!! GTGGATTTGACTTGAGTTGT+AGG + chr4.4:16950785-16950804 MS.gene023349:intron 40.0%
!! TTTTCAGGAAGAGCAAAAGG+AGG + chr4.4:16948789-16948808 MS.gene023349:intron 40.0%
!!! ATGGTGCTTTTTTCTTTGGC+AGG + chr4.4:16949670-16949689 MS.gene023349:intron 40.0%
!!! ATTTGGCGTCTTTTTTCTCC+AGG + chr4.4:16949243-16949262 MS.gene023349:intron 40.0%
!!! CAGGATGCTTTTTGAAACAG+AGG + chr4.4:16950022-16950041 MS.gene023349:CDS 40.0%
!!! GAAAGACTTTTTCAGCTGCT+CGG - chr4.4:16948924-16948943 None:intergenic 40.0%
AAGGGATGGGTGTTAATCCT+TGG + chr4.4:16951453-16951472 MS.gene023349:CDS 45.0%
AATAACTGGCATCAGTGACC+TGG + chr4.4:16950574-16950593 MS.gene023349:CDS 45.0%
AATGAGATGCTCCTGAAGAG+AGG - chr4.4:16952183-16952202 None:intergenic 45.0%
ACCAACCACTTAACTGCCAA+AGG - chr4.4:16949397-16949416 None:intergenic 45.0%
ACCTTTGGCAGTTAAGTGGT+TGG + chr4.4:16949393-16949412 MS.gene023349:intron 45.0%
ACTCCAGAAAATGGAGGTCA+AGG + chr4.4:16952523-16952542 MS.gene023349:CDS 45.0%
AGATACCATTAGAGAGCCTC+TGG - chr4.4:16953165-16953184 None:intergenic 45.0%
AGGTTGCTGTATCTACCAAC+AGG + chr4.4:16948410-16948429 MS.gene023349:intron 45.0%
CAAGTGATAGCATGCACTTG+GGG + chr4.4:16949769-16949788 MS.gene023349:CDS 45.0%
CACTTGTAAGACTGTTTGGG+AGG - chr4.4:16951208-16951227 None:intergenic 45.0%
CAGCCTTAACATACTTCGCT+AGG - chr4.4:16949968-16949987 None:intergenic 45.0%
CATCAAGATACTTTCCCCTC+AGG + chr4.4:16953087-16953106 MS.gene023349:CDS 45.0%
CCCTTAGGCTTAAAAGACCA+TGG + chr4.4:16950907-16950926 MS.gene023349:CDS 45.0%
CCTGAAATCAGCACATGGAT+CGG + chr4.4:16948291-16948310 MS.gene023349:intron 45.0%
CGGAGATGGATACATTGGAA+AGG - chr4.4:16950883-16950902 None:intergenic 45.0%
CGTGCAGTTGAAGATTGAAC+AGG - chr4.4:16952130-16952149 None:intergenic 45.0%
CGTGTGGTTTACTTTCCACA+AGG + chr4.4:16947810-16947829 MS.gene023349:CDS 45.0%
CTGAATCCTGGATTGACACA+CGG + chr4.4:16952475-16952494 MS.gene023349:CDS 45.0%
CTTGCAATCAACTCTTGAGC+AGG - chr4.4:16949058-16949077 None:intergenic 45.0%
CTTGTTTGTTTGCCAGCTGA+TGG + chr4.4:16947783-16947802 MS.gene023349:CDS 45.0%
CTTTCCGATTCAGGCAGATA+CGG + chr4.4:16948639-16948658 MS.gene023349:intron 45.0%
GATACCATTAGAGAGCCTCT+GGG - chr4.4:16953164-16953183 None:intergenic 45.0%
GATATCCAACGATCTTCCGA+AGG - chr4.4:16952731-16952750 None:intergenic 45.0%
GCAACCCATTGATGGAACAT+TGG - chr4.4:16949539-16949558 None:intergenic 45.0%
GCACAAACACTAACTGTTGC+AGG + chr4.4:16948232-16948251 MS.gene023349:intron 45.0%
GCATATCTTCCTGCAGAGTT+GGG + chr4.4:16948811-16948830 MS.gene023349:CDS 45.0%
GCCATAGCTTGGTACATATC+TGG - chr4.4:16951518-16951537 None:intergenic 45.0%
GCCTTAACATACTTCGCTAG+GGG - chr4.4:16949966-16949985 None:intergenic 45.0%
GCTGTTGTGTAAAGTCCTGT+AGG - chr4.4:16949033-16949052 None:intergenic 45.0%
GGTATCTGTGATGACTACAC+TGG + chr4.4:16953178-16953197 MS.gene023349:CDS 45.0%
GGTTGCTGTATCTACCAACA+GGG + chr4.4:16948411-16948430 MS.gene023349:intron 45.0%
GTCAAGTGATAGCATGCACT+TGG + chr4.4:16949767-16949786 MS.gene023349:CDS 45.0%
GTTCGGATTGACACTGAGTT+TGG + chr4.4:16948021-16948040 MS.gene023349:intron 45.0%
GTTTACAAGTCAGGGTCCTT+CGG + chr4.4:16952712-16952731 MS.gene023349:CDS 45.0%
GTTTGAGCCTGAGATTGAGA+TGG - chr4.4:16951719-16951738 None:intergenic 45.0%
TCAGCATCCATCTCAATCTC+AGG + chr4.4:16951709-16951728 MS.gene023349:CDS 45.0%
TCAGCTGGCAAACAAACAAG+AGG - chr4.4:16947783-16947802 None:intergenic 45.0%
TCCCCTAGCGAAGTATGTTA+AGG + chr4.4:16949962-16949981 MS.gene023349:CDS 45.0%
TGAACAGGAACCCAAGAGTT+TGG - chr4.4:16952115-16952134 None:intergenic 45.0%
TGGCTGCTGAAATTGAAGCA+AGG - chr4.4:16951597-16951616 None:intergenic 45.0%
TTAATCCTTGGATGCAGGCA+AGG + chr4.4:16951465-16951484 MS.gene023349:CDS 45.0%
TTCACATTGGCGTTCAGTGA+AGG + chr4.4:16950616-16950635 MS.gene023349:CDS 45.0%
! ACTTGAGTTGTAGGTTGGCT+GGG + chr4.4:16950794-16950813 MS.gene023349:intron 45.0%
! CAGGTGGCATCGTAATTTTC+TGG - chr4.4:16948095-16948114 None:intergenic 45.0%
! CTGCTCAAGAGTTGATTGCA+AGG + chr4.4:16949056-16949075 MS.gene023349:CDS 45.0%
! CTTTTAAGCCTAAGGGGGAA+CGG - chr4.4:16950903-16950922 None:intergenic 45.0%
! GAAGCAGGATGCTGTTTAGA+AGG - chr4.4:16951575-16951594 None:intergenic 45.0%
! GCAACCTAGAGTATCTCTGT+GGG + chr4.4:16950839-16950858 MS.gene023349:CDS 45.0%
! GCCATGGTCTTTTAAGCCTA+AGG - chr4.4:16950911-16950930 None:intergenic 45.0%
! GCTGATTCTTCTCTGAATCC+TGG + chr4.4:16952463-16952482 MS.gene023349:CDS 45.0%
! GGGATTTGCATGGTAATGAC+TGG + chr4.4:16949077-16949096 MS.gene023349:CDS 45.0%
! GGGCTAGCACTGAAATGTAA+GGG - chr4.4:16949927-16949946 None:intergenic 45.0%
! GTAGGGAGTGTGCTATAGAA+GGG + chr4.4:16952284-16952303 MS.gene023349:CDS 45.0%
! TTTCAGTTGGTATGCGCTTC+AGG + chr4.4:16950003-16950022 MS.gene023349:CDS 45.0%
!! CGATCCATGTGCTGATTTCA+GGG - chr4.4:16948293-16948312 None:intergenic 45.0%
!! CGCGTGATATTTTGGATGAC+AGG + chr4.4:16953041-16953060 MS.gene023349:intron 45.0%
!! GCTGTTTTCATACGCTATCC+CGG + chr4.4:16951116-16951135 MS.gene023349:intron 45.0%
!! GTTCAGAAGCTCTAGACCAT+TGG - chr4.4:16953131-16953150 None:intergenic 45.0%
!! TGGGCTAGCACTGAAATGTA+AGG - chr4.4:16949928-16949947 None:intergenic 45.0%
!!! GGTAATGGCGTTTTGAGACA+TGG - chr4.4:16952248-16952267 None:intergenic 45.0%
AATGCACGCTTGGGCATTAG+AGG - chr4.4:16950446-16950465 None:intergenic 50.0%
ACACTCCCTACCAGGAAATG+GGG - chr4.4:16952275-16952294 None:intergenic 50.0%
ACCTGTTCACTGTGACCTTG+TGG - chr4.4:16947828-16947847 None:intergenic 50.0%
AGGAAATGGGGGCAAGGTAA+TGG - chr4.4:16952263-16952282 None:intergenic 50.0%
AGGGAGGGAGGTAGAGAATA+GGG - chr4.4:16948274-16948293 None:intergenic 50.0%
AGTGATACAAGCACTCACGG+AGG + chr4.4:16948883-16948902 MS.gene023349:CDS 50.0%
ATGAGTCTACAGCAGGTGAG+AGG + chr4.4:16950817-16950836 MS.gene023349:CDS 50.0%
ATGCACGCTTGGGCATTAGA+GGG - chr4.4:16950445-16950464 None:intergenic 50.0%
ATGCTCCTGAAGAGAGGAGA+GGG - chr4.4:16952177-16952196 None:intergenic 50.0%
ATTACCTTGCCCCCATTTCC+TGG + chr4.4:16952262-16952281 MS.gene023349:CDS 50.0%
CAACCCGTCGCTTGTATGTT+TGG - chr4.4:16948141-16948160 None:intergenic 50.0%
CAACTACCTTCTTGAGGTGG+AGG - chr4.4:16947421-16947440 None:intergenic 50.0%
CAAGCCTGCGAGCATTAAGT+GGG - chr4.4:16951354-16951373 None:intergenic 50.0%
CACACTCCCTACCAGGAAAT+GGG - chr4.4:16952276-16952295 None:intergenic 50.0%
CAGAGGAATCTAGTGTTCGG+CGG + chr4.4:16950039-16950058 MS.gene023349:CDS 50.0%
CAGCCACAGAATTTCCCCAA+TGG + chr4.4:16951611-16951630 MS.gene023349:CDS 50.0%
CTCGGGGTAGTTGGAGAATT+TGG - chr4.4:16952755-16952774 None:intergenic 50.0%
CTGCTGCACTTCAGGATATG+AGG + chr4.4:16951540-16951559 MS.gene023349:CDS 50.0%
CTTAAAAGACCATGGCCTCC+AGG + chr4.4:16950915-16950934 MS.gene023349:CDS 50.0%
CTTAATGCTCGCAGGCTTGA+AGG + chr4.4:16951355-16951374 MS.gene023349:intron 50.0%
GAACTTTGGCATGCTTGTGC+TGG + chr4.4:16947756-16947775 MS.gene023349:CDS 50.0%
GATGTTCTTCTCCTCGGTGA+TGG + chr4.4:16952871-16952890 MS.gene023349:CDS 50.0%
GCAATCAACTCTTGAGCAGG+AGG - chr4.4:16949055-16949074 None:intergenic 50.0%
GCAGCAATCTCAACCTCATC+AGG + chr4.4:16951664-16951683 MS.gene023349:CDS 50.0%
GCATGAATTCTCCCCTGTTG+TGG + chr4.4:16951390-16951409 MS.gene023349:CDS 50.0%
GCCAATGTGAATTTGGCCAC+CGG - chr4.4:16950607-16950626 None:intergenic 50.0%
GCCAGTGATACAAGCACTCA+CGG + chr4.4:16948880-16948899 MS.gene023349:CDS 50.0%
GCTCGTATGTTTGGGCTTGA+AGG + chr4.4:16952790-16952809 MS.gene023349:CDS 50.0%
GGAACCCAAGAGTTTGGTCT+AGG - chr4.4:16952109-16952128 None:intergenic 50.0%
GGCATATCTTCCTGCAGAGT+TGG + chr4.4:16948810-16948829 MS.gene023349:CDS 50.0%
GGCATTTGCTTACAACAGGG+TGG + chr4.4:16949277-16949296 MS.gene023349:CDS 50.0%
GGGAACGGAGATGGATACAT+TGG - chr4.4:16950888-16950907 None:intergenic 50.0%
GGGTGTTAATCCTTGGATGC+AGG + chr4.4:16951460-16951479 MS.gene023349:CDS 50.0%
GGTTGATTGAGATGGAGGTG+CGG - chr4.4:16951954-16951973 None:intergenic 50.0%
GTCTCCGTATCTGCCTGAAT+CGG - chr4.4:16948646-16948665 None:intergenic 50.0%
GTGAACAGGTGAGTCAGACA+TGG + chr4.4:16947838-16947857 MS.gene023349:intron 50.0%
GTTTGGGCTTGAAGGTGAGT+TGG + chr4.4:16952798-16952817 MS.gene023349:CDS 50.0%
TAAGCAAATGCCTCTTCGGC+TGG - chr4.4:16949269-16949288 None:intergenic 50.0%
TCAAGCCTGCGAGCATTAAG+TGG - chr4.4:16951355-16951374 None:intergenic 50.0%
TCAGTGACCTGGATTCTGTC+CGG + chr4.4:16950585-16950604 MS.gene023349:CDS 50.0%
TCCACAAGGTCACAGTGAAC+AGG + chr4.4:16947824-16947843 MS.gene023349:CDS 50.0%
TCCGGTGGCCAAATTCACAT+TGG + chr4.4:16950603-16950622 MS.gene023349:CDS 50.0%
TCCGTGAGTGCTTGTATCAC+TGG - chr4.4:16948884-16948903 None:intergenic 50.0%
TCTATAGCACACTCCCTACC+AGG - chr4.4:16952283-16952302 None:intergenic 50.0%
TGCCTCAAGTGGAGCAACTA+GGG + chr4.4:16952209-16952228 MS.gene023349:CDS 50.0%
TTCAGTCCTCCACCTCAAGA+AGG + chr4.4:16947412-16947431 MS.gene023349:CDS 50.0%
TTGGAGGACCCTGTAAGATC+AGG + chr4.4:16952817-16952836 MS.gene023349:CDS 50.0%
TTTCATACGCTATCCCGGAG+CGG + chr4.4:16951121-16951140 MS.gene023349:intron 50.0%
TTTCCATAAGCTCTCCGCTC+CGG - chr4.4:16951138-16951157 None:intergenic 50.0%
TTTGCAGTTCCCAACTCTGC+AGG - chr4.4:16948823-16948842 None:intergenic 50.0%
! AAGAAATGGCTTGCATGGGC+TGG - chr4.4:16951976-16951995 None:intergenic 50.0%
! AGAAATGGCTTGCATGGGCT+GGG - chr4.4:16951975-16951994 None:intergenic 50.0%
! AGCGAGCTTGCTCGTATGTT+TGG + chr4.4:16952781-16952800 MS.gene023349:CDS 50.0%
! ATAAGTTGGGGAGGCAAGCT+TGG - chr4.4:16948460-16948479 None:intergenic 50.0%
! ATGTGGAGTACTTACGGCCA+TGG - chr4.4:16952898-16952917 None:intergenic 50.0%
! CATTTGCTGCACTTCCTGAG+GGG - chr4.4:16953104-16953123 None:intergenic 50.0%
! CCATTTGCTGCACTTCCTGA+GGG - chr4.4:16953105-16953124 None:intergenic 50.0%
! CCTCAGGAAGTGCAGCAAAT+GGG + chr4.4:16953103-16953122 MS.gene023349:CDS 50.0%
! CTCAGGAAGTGCAGCAAATG+GGG + chr4.4:16953104-16953123 MS.gene023349:CDS 50.0%
! GACTTGAGTTGTAGGTTGGC+TGG + chr4.4:16950793-16950812 MS.gene023349:intron 50.0%
! GCGAGCTTGCTCGTATGTTT+GGG + chr4.4:16952782-16952801 MS.gene023349:CDS 50.0%
! GGCAACCTAGAGTATCTCTG+TGG + chr4.4:16950838-16950857 MS.gene023349:CDS 50.0%
! GGTAGGGAGTGTGCTATAGA+AGG + chr4.4:16952283-16952302 MS.gene023349:CDS 50.0%
!! ATGGGCTGGGTTGATTGAGA+TGG - chr4.4:16951962-16951981 None:intergenic 50.0%
!! CCATGTGCTGATTTCAGGGA+GGG - chr4.4:16948289-16948308 None:intergenic 50.0%
!! CCGATCCATGTGCTGATTTC+AGG - chr4.4:16948294-16948313 None:intergenic 50.0%
!! TCCATGTGCTGATTTCAGGG+AGG - chr4.4:16948290-16948309 None:intergenic 50.0%
AGACCCCACAGTTGTTAGCC+CGG - chr4.4:16953230-16953249 None:intergenic 55.0%
AGCTGCCAGCCTGATCTTAC+AGG - chr4.4:16952829-16952848 None:intergenic 55.0%
AGGACCCTGTAAGATCAGGC+TGG + chr4.4:16952821-16952840 MS.gene023349:CDS 55.0%
AGGGTCCTTCGGAAGATCGT+TGG + chr4.4:16952723-16952742 MS.gene023349:CDS 55.0%
ATCCATCTCCGTTCCCCCTT+AGG + chr4.4:16950892-16950911 MS.gene023349:CDS 55.0%
CACTCCCTACCAGGAAATGG+GGG - chr4.4:16952274-16952293 None:intergenic 55.0%
CAGGGAGGGAGGTAGAGAAT+AGG - chr4.4:16948275-16948294 None:intergenic 55.0%
CCAACCCAGAGGCTCTCTAA+TGG + chr4.4:16953157-16953176 MS.gene023349:CDS 55.0%
CCAGGACTGCCTTCATTCCA+TGG + chr4.4:16950933-16950952 MS.gene023349:CDS 55.0%
CCATGGAATGAAGGCAGTCC+TGG - chr4.4:16950936-16950955 None:intergenic 55.0%
CCATTAGAGAGCCTCTGGGT+TGG - chr4.4:16953160-16953179 None:intergenic 55.0%
CCCTCCCTGAAATCAGCACA+TGG + chr4.4:16948286-16948305 MS.gene023349:intron 55.0%
CTGCCTCAAGTGGAGCAACT+AGG + chr4.4:16952208-16952227 MS.gene023349:CDS 55.0%
CTTGCCCCCATTTCCTGGTA+GGG + chr4.4:16952267-16952286 MS.gene023349:CDS 55.0%
GATGCTCCTGAAGAGAGGAG+AGG - chr4.4:16952178-16952197 None:intergenic 55.0%
GCACACTCCCTACCAGGAAA+TGG - chr4.4:16952277-16952296 None:intergenic 55.0%
GCTGATGCTGAAGAAGCTGC+TGG - chr4.4:16951751-16951770 None:intergenic 55.0%
GCTGCCAGCCTGATCTTACA+GGG - chr4.4:16952828-16952847 None:intergenic 55.0%
GGAATCTAGTGTTCGGCGGT+AGG + chr4.4:16950043-16950062 MS.gene023349:intron 55.0%
GGCTTCGAGACGCAGATAGA+GGG + chr4.4:16951411-16951430 MS.gene023349:CDS 55.0%
GGGGAGGCAAGCTTGGATTT+GGG - chr4.4:16948453-16948472 None:intergenic 55.0%
GTGCAGCAAATGGGGACCAA+TGG + chr4.4:16953112-16953131 MS.gene023349:CDS 55.0%
TATGGCAGCTGCTGCACTTC+AGG + chr4.4:16951532-16951551 MS.gene023349:CDS 55.0%
TCCACTGCAACACGCTTGGA+AGG - chr4.4:16952154-16952173 None:intergenic 55.0%
TCCTCCCACTTAATGCTCGC+AGG + chr4.4:16951347-16951366 MS.gene023349:intron 55.0%
TGAACTCAGCTCCAACCCAG+AGG + chr4.4:16953146-16953165 MS.gene023349:CDS 55.0%
TGATGACTACACTGGCCGTG+AGG + chr4.4:16953186-16953205 MS.gene023349:CDS 55.0%
TGCCCTAGTTGCTCCACTTG+AGG - chr4.4:16952214-16952233 None:intergenic 55.0%
TGCGTCTCGAAGCCACAACA+GGG - chr4.4:16951405-16951424 None:intergenic 55.0%
TGGAATGAAGGCAGTCCTGG+AGG - chr4.4:16950933-16950952 None:intergenic 55.0%
TGGCTTCGAGACGCAGATAG+AGG + chr4.4:16951410-16951429 MS.gene023349:CDS 55.0%
TGGGGAGGCAAGCTTGGATT+TGG - chr4.4:16948454-16948473 None:intergenic 55.0%
TTCCATAAGCTCTCCGCTCC+GGG - chr4.4:16951137-16951156 None:intergenic 55.0%
! AGCACCGGGCTAACAACTGT+GGG + chr4.4:16953223-16953242 MS.gene023349:CDS 55.0%
! CCCATTTGCTGCACTTCCTG+AGG - chr4.4:16953106-16953125 None:intergenic 55.0%
! CCCTCAGGAAGTGCAGCAAA+TGG + chr4.4:16953102-16953121 MS.gene023349:CDS 55.0%
! TGGGCTTGAAGGTGAGTTGG+AGG + chr4.4:16952801-16952820 MS.gene023349:CDS 55.0%
! TTCTCCTCGGTGATGGTCCA+TGG + chr4.4:16952878-16952897 MS.gene023349:CDS 55.0%
!! AAGCACCGGGCTAACAACTG+TGG + chr4.4:16953222-16953241 MS.gene023349:CDS 55.0%
!! GGCTGGGTTGATTGAGATGG+AGG - chr4.4:16951959-16951978 None:intergenic 55.0%
!! TGTGCTGATTTCAGGGAGGG+AGG - chr4.4:16948286-16948305 None:intergenic 55.0%
!!! ACTTTTTCAGCTGCTCGGCG+AGG - chr4.4:16948919-16948938 None:intergenic 55.0%
ACCACACGGCTTCCATCAGC+TGG - chr4.4:16947798-16947817 None:intergenic 60.0%
AGCAAGCTCGCTGCGTAGCT+CGG - chr4.4:16952773-16952792 None:intergenic 60.0%
AGCCTAAGGGGGAACGGAGA+TGG - chr4.4:16950897-16950916 None:intergenic 60.0%
AGGGTCCACTGCAACACGCT+TGG - chr4.4:16952158-16952177 None:intergenic 60.0%
ATCCCGGAGCGGAGAGCTTA+TGG + chr4.4:16951132-16951151 MS.gene023349:intron 60.0%
CCTACCAGGAAATGGGGGCA+AGG - chr4.4:16952269-16952288 None:intergenic 60.0%
CCTGGATTGACACACGGCGT+CGG + chr4.4:16952481-16952500 MS.gene023349:CDS 60.0%
CCTTGCCCCCATTTCCTGGT+AGG + chr4.4:16952266-16952285 MS.gene023349:CDS 60.0%
CTGCGTCTCGAAGCCACAAC+AGG - chr4.4:16951406-16951425 None:intergenic 60.0%
GCACCGGGCTAACAACTGTG+GGG + chr4.4:16953224-16953243 MS.gene023349:CDS 60.0%
GCCTGCGAGCATTAAGTGGG+AGG - chr4.4:16951351-16951370 None:intergenic 60.0%
GCCTTCCAAGCGTGTTGCAG+TGG + chr4.4:16952150-16952169 MS.gene023349:CDS 60.0%
GCGTCTCGAAGCCACAACAG+GGG - chr4.4:16951404-16951423 None:intergenic 60.0%
GGCTGGGATGAGTCTACAGC+AGG + chr4.4:16950810-16950829 MS.gene023349:CDS 60.0%
GTGACCTGGATTCTGTCCGG+TGG + chr4.4:16950588-16950607 MS.gene023349:CDS 60.0%
GTGCAGCAGCTGCCATAGCT+TGG - chr4.4:16951529-16951548 None:intergenic 60.0%
GTGGACCCTCTCCTCTCTTC+AGG + chr4.4:16952169-16952188 MS.gene023349:CDS 60.0%
TCGAGCCTTGCCTGCATCCA+AGG - chr4.4:16951473-16951492 None:intergenic 60.0%
TTGGCCACCGGACAGAATCC+AGG - chr4.4:16950595-16950614 None:intergenic 60.0%
TTTCTCCAGGCCAGCCGAAG+AGG + chr4.4:16949256-16949275 MS.gene023349:intron 60.0%
! AAATGCCTCTTCGGCTGGCC+TGG - chr4.4:16949264-16949283 None:intergenic 60.0%
ACGGCCATGGACCATCACCG+AGG - chr4.4:16952885-16952904 None:intergenic 65.0%
CAAGCTCGCTGCGTAGCTCG+GGG - chr4.4:16952771-16952790 None:intergenic 65.0%
CCGACGCCGTGTGTCAATCC+AGG - chr4.4:16952484-16952503 None:intergenic 65.0%
GAAGGCAGTCCTGGAGGCCA+TGG - chr4.4:16950927-16950946 None:intergenic 65.0%
GCAAGCTCGCTGCGTAGCTC+GGG - chr4.4:16952772-16952791 None:intergenic 65.0%
GCCAGCTGATGGAAGCCGTG+TGG + chr4.4:16947794-16947813 MS.gene023349:CDS 65.0%
GCTGCGTAGCTCGGGGTAGT+TGG - chr4.4:16952764-16952783 None:intergenic 65.0%
!! ACACACGGCGTCGGTGAGTC+GGG + chr4.4:16952490-16952509 MS.gene023349:CDS 65.0%
!! GACACACGGCGTCGGTGAGT+CGG + chr4.4:16952489-16952508 MS.gene023349:CDS 65.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 16947391 16953261 16947391 ID=MS.gene023349
chr4.4 mRNA 16947391 16953261 16947391 ID=MS.gene023349.t1;Parent=MS.gene023349
chr4.4 exon 16947391 16947433 16947391 ID=MS.gene023349.t1.exon1;Parent=MS.gene023349.t1
chr4.4 CDS 16947391 16947433 16947391 ID=cds.MS.gene023349.t1;Parent=MS.gene023349.t1
chr4.4 exon 16947733 16947845 16947733 ID=MS.gene023349.t1.exon2;Parent=MS.gene023349.t1
chr4.4 CDS 16947733 16947845 16947733 ID=cds.MS.gene023349.t1;Parent=MS.gene023349.t1
chr4.4 exon 16948412 16948507 16948412 ID=MS.gene023349.t1.exon3;Parent=MS.gene023349.t1
chr4.4 CDS 16948412 16948507 16948412 ID=cds.MS.gene023349.t1;Parent=MS.gene023349.t1
chr4.4 exon 16948652 16948708 16948652 ID=MS.gene023349.t1.exon4;Parent=MS.gene023349.t1
chr4.4 CDS 16948652 16948708 16948652 ID=cds.MS.gene023349.t1;Parent=MS.gene023349.t1
chr4.4 exon 16948796 16948951 16948796 ID=MS.gene023349.t1.exon5;Parent=MS.gene023349.t1
chr4.4 CDS 16948796 16948951 16948796 ID=cds.MS.gene023349.t1;Parent=MS.gene023349.t1
chr4.4 exon 16949037 16949121 16949037 ID=MS.gene023349.t1.exon6;Parent=MS.gene023349.t1
chr4.4 CDS 16949037 16949121 16949037 ID=cds.MS.gene023349.t1;Parent=MS.gene023349.t1
chr4.4 exon 16949265 16949355 16949265 ID=MS.gene023349.t1.exon7;Parent=MS.gene023349.t1
chr4.4 CDS 16949265 16949355 16949265 ID=cds.MS.gene023349.t1;Parent=MS.gene023349.t1
chr4.4 exon 16949692 16949856 16949692 ID=MS.gene023349.t1.exon8;Parent=MS.gene023349.t1
chr4.4 CDS 16949692 16949856 16949692 ID=cds.MS.gene023349.t1;Parent=MS.gene023349.t1
chr4.4 exon 16949938 16950060 16949938 ID=MS.gene023349.t1.exon9;Parent=MS.gene023349.t1
chr4.4 CDS 16949938 16950060 16949938 ID=cds.MS.gene023349.t1;Parent=MS.gene023349.t1
chr4.4 exon 16950562 16950637 16950562 ID=MS.gene023349.t1.exon10;Parent=MS.gene023349.t1
chr4.4 CDS 16950562 16950637 16950562 ID=cds.MS.gene023349.t1;Parent=MS.gene023349.t1
chr4.4 exon 16950807 16950954 16950807 ID=MS.gene023349.t1.exon11;Parent=MS.gene023349.t1
chr4.4 CDS 16950807 16950954 16950807 ID=cds.MS.gene023349.t1;Parent=MS.gene023349.t1
chr4.4 exon 16951369 16952573 16951369 ID=MS.gene023349.t1.exon12;Parent=MS.gene023349.t1
chr4.4 CDS 16951369 16952573 16951369 ID=cds.MS.gene023349.t1;Parent=MS.gene023349.t1
chr4.4 exon 16952712 16952902 16952712 ID=MS.gene023349.t1.exon13;Parent=MS.gene023349.t1
chr4.4 CDS 16952712 16952902 16952712 ID=cds.MS.gene023349.t1;Parent=MS.gene023349.t1
chr4.4 exon 16953063 16953261 16953063 ID=MS.gene023349.t1.exon14;Parent=MS.gene023349.t1
chr4.4 CDS 16953063 16953261 16953063 ID=cds.MS.gene023349.t1;Parent=MS.gene023349.t1
Gene Sequence

>MS.gene023349

ATGAAGCTTTCTTCAGCTGGGTTCAGTCCTCCACCTCAAGAAGGTAGTTGAATTTCTGTTTGCAATTGCTTACTCTTCTTCCATTTCACTTTCTCAATCCTTTTTGGTAACAATTTTTTTTCATTTTGGGGATTAGAATGTTCTATTCATCTTTTAGATTTAGATGATTGCTGAGGATATTAATTTGTATGTCTAATAATAATATGGTGGTGTTACTTTGTTGTTTTAAGATCTTGATCTTGCTAAGAACTTGCCAAAGTTCCTTTATCATTTGTGGGTTTAAGGTGGGAGTTATGAAGTTTCTGTTTCATATTGATGACATTAGGATGCATTTTTTTGTAGGAGAAAAGCGGGTTCTAGATTCAGAACTTTGGCATGCTTGTGCTGGTCCTCTTGTTTGTTTGCCAGCTGATGGAAGCCGTGTGGTTTACTTTCCACAAGGTCACAGTGAACAGGTGAGTCAGACATGGTGTGAGATTCTCTAGATTGCTCCTAGAGAAAAATCACTGTTGAAGCTCTCCAATACTTGTTTTTCAAACCATGGTGTGTTAAAAAATAATAATAATAATTGGTTCCTTTTTCATGTCTTCGATTTGTGTCTTTGTGATGCAATGGGCTGCTAATTTGTATGTTCGGATTGACACTGAGTTTGGCAGAATTACGGTGCGCCTGATTTTAGCAAAAGCTACACTTTGAAGTTACCAGAAAATTACGATGCCACCTGATTTTGTCAAATTGGCCTTGATTCCAAACATACAAGCGACGGGTTGTAATAAGAAAACTGACTTTATGCTTCCACTAAAATGACCCGTGTTTATACTAATGCTTAACATACTCCTAAGCACAAACACTAACTGTTGCAGGTTAATGAATTGACTTTCCCTATTCTCTACCTCCCTCCCTGAAATCAGCACATGGATCGGCTTTTTATGTGTTTGATTTGTGTCTGTGAAAACTTATATGTTCTTTTTCTGCATAAACTATGTGCATAAATGATCTAAATCTGCAATTTTCTGCTCAGGTTGCTGTATCTACCAACAGGGAAGTTGATACTTATATCCCAAATCCAAGCTTGCCTCCCCAACTTATTTGTCAACTTCATAATCTGACTATGCATGTAAGGCTTGTTTATTCATTTATTTAATCTTTTACAGTGATAAGACTTTTTTTTTTTTTTTTTGTTTCCTTGTTTCATACTCTCACATATTCTTGTTCCAGCACTCTTTTTCCTTAACAATTTGTTCATTTCTTTCCGATTCAGGCAGATACGGAGACAGATGAAGTGTATGCACAGATGACCTTGCAACCTTTAAATCCTGTATGGTTCCATTTCTTAACTGAAACCAGATATTTGGACTATGGCTACATTCAACTTTTTAACTTTTGGCTATTACAATGTTTTCAGGAAGAGCAAAAGGAGGCATATCTTCCTGCAGAGTTGGGAACTGCAAATAAACAGCCAACAAACTACTTTTGCAAAATTTTGACAGCCAGTGATACAAGCACTCACGGAGGTTTCTCTGTTCCTCGCCGAGCAGCTGAAAAAGTCTTTCCTCCATTGGTAACATTTGTCACTGTTGTGCTGTAAATAGTAGTCAACATGTTCATAAAATCTTTTAACTTGACTTCATAATTATGACCTACAGGACTTTACACAACAGCCTCCTGCTCAAGAGTTGATTGCAAGGGATTTGCATGGTAATGACTGGAAATTCAAACATATCTTCCGTGGTAAGTTATAAATCTGAGATTCAACAGCCTCTTATTTTTTATTTTTTTACTTCAATTAGAAGCTTTTCATGTTTATTACTTGGTGGTGAAAATAAGTTCACATTCCATTTATAAGGTTTAAATTTGGCGTCTTTTTTCTCCAGGCCAGCCGAAGAGGCATTTGCTTACAACAGGGTGGAGTGTCTTTGTGAGTGCTAAAAGACTTGTTGCTGGTGATTCAGTGCTGTTTATATGGTAAGTAGTTTTTTTTAGCATGTATGTCTGAAATTTAACCTTTGGCAGTTAAGTGGTTGGTTGACTTGTTTCAGCTCTGAAACAGATCATGTAAATTTGTAATTCATTTTGCCATTCAGAAGAATATAGGATAAGTCTTATTATGACATTTTATGTGTATGTTTATGTTCATATGTTGATCCAATGTTCCATCAATGGGTTGCAAATTGCAACTGTAGTGTGGTTGCATTTGTTTTTCGTAGTTTTTCTAATCTAGGCTTTATGATTTTTTGTGAAGCATAGTTAATTGTGATATTATATAATTGGTGTGATTTATGGTGCTTTTTTCTTTGGCAGGAATGAAAAAAATCAGTTGCTTCTAGGTATTCGGCGTGCTAGTCGACCACAACATATGATGCCTTCATCAGTGTTGTCAAGTGATAGCATGCACTTGGGGCTGCTTGCTGCTGCAGCTCATGCAGCTGCAACAAACAGTCGTTTCACCATTTTCTATAACCCACGGTATACCTATCATATATTTCTATTAGTTCCAAGTTAGAATATGGCTACTTAAACTGACATTTTTTTTCCCTTACATTTCAGTGCTAGCCCATCAGAATTTGTCATTCCCCTAGCGAAGTATGTTAAGGCTGTATATCATACTCGAGTTTCAGTTGGTATGCGCTTCAGGATGCTTTTTGAAACAGAGGAATCTAGTGTTCGGCGGTAGGTTTCTTATAATTGTTGAAAATGATAGTGGAAATGTTTTTTTTTCTTATGTTTGAAATGTTGGTTAATGGAGCTAATATGCAATATCATTTATTAAAATCAACATGATTTACTTTTCCAAGTTATCATAAGTCATAGCCTAATTTAATAGAAAAATTCTTGTGCTTGTCACAAGTATAGACTACACTACGTTACTCAAATTCAATTCAGGATATGGAATTACGGACACATATTTACTCATTTATCTAGACGTGTCATAAATGGATTGCTTGCACGCTAGTTTACCTTTTGACTCAAATTTAGTCTTTGTAATGATGTTCAATAATTTGTTCTAGTGAGATAAAGTAAGAATATGGATATTAATATATACATATTCTACCCTCTAATGCCCAAGCGTGCATTCTATAAAGATATGATTAAATTCATCATTGAGTGGATAGATATTGTCAGTCACACGTTGGGGATGTTTGTTTGTGATATTAATACATTCTCATGCAGATACATGGGAACAATAACTGGCATCAGTGACCTGGATTCTGTCCGGTGGCCAAATTCACATTGGCGTTCAGTGAAGGTATGTATTGGATCCTTTATAATATATTTCATTGATGTTATATAAACATTAAATTGAATGCTGTTTGTATCTCCAAACAAAACATCAATAATATCTTGCTTCGGAAAAAATTATGTCTTATTGAGAATTGAATAAACATTTTTAATTGTGGATTTGACTTGAGTTGTAGGTTGGCTGGGATGAGTCTACAGCAGGTGAGAGGCAACCTAGAGTATCTCTGTGGGAAATTGAGCCATTAACAACCTTTCCAATGTATCCATCTCCGTTCCCCCTTAGGCTTAAAAGACCATGGCCTCCAGGACTGCCTTCATTCCATGGTATGTATATTGCCACATTTAAGCCAAAAAATATTTAAGAACTTTTCTTACTATTTAGGCTCTGTTTGGATAAACTTAATTACATGCTTATAGCATAATGTATAAGCTATTTCTTTAACTAAAGATAAAATGAAGTCAAACTGTTATCGTAGAAGCTATAAGCTGTTTTCATACGCTATCCCGGAGCGGAGAGCTTATGGAAATAAGCTGAAAACAACTCATGGACATGTCATAAACTATTTCTTCAAACCCTCCCAAACAGTCTTACAAGTGCATGTGCCAGTAGATAAGCTCAAATATGTAAATCCTAGCAGACCATAATCAATTAATCTAGCTTTAACTTTCAAAATGCTGACATTTATTCCTTTTACTAATCTACTTATTCTCACTGATCCTCCCACTTAATGCTCGCAGGCTTGAAGGATGATGATTTTGGCATGAATTCTCCCCTGTTGTGGCTTCGAGACGCAGATAGAGGGCTTCAGACTCTTAATTTTCAAGGGATGGGTGTTAATCCTTGGATGCAGGCAAGGCTCGATCCATCCATTATGAATTTGCAACCAGATATGTACCAAGCTATGGCAGCTGCTGCACTTCAGGATATGAGGACTTTAGATCCTTCTAAACAGCATCCTGCTTCCTTGCTTCAATTTCAGCAGCCACAGAATTTCCCCAATGGTAATGCTGCTTTAATGCAGAATCAGATGTTGCAGCAATCTCAACCTCATCAGGCTTTTCCAAAGAATCAAGAAAGTCAGCATCCATCTCAATCTCAGGCTCAAACACAACAATTCCAGCAGCTTCTTCAGCATCAGCACTCATTCACTAATCAAAATTATCATCAGCAGCAGCAACAACAGCAGCAGCAACAGCAGCAGCAACATCAGCAGCAGCAGCAACAACAACAGCTGCAACAACAACAATCACAACAGCAACAACAAGTTGTAGATCATCAACAGATGTCAAATGCCGTCTCCACAATGTCTCAGTTTGTTTCCGCACCTCCATCTCAATCAACCCAGCCCATGCAAGCCATTTCTTCAATTGGCCATCAACAAAACTTTTCGGACTCAAATGGGAACCCAGTTTCTCCTTTGCACAATATGTTAGGTTCATTTTCCAATGACGAAACATCTCACCTTCTCAACTTTCCTAGACCAAACTCTTGGGTTCCTGTTCAATCTTCAACTGCACGGCCTTCCAAGCGTGTTGCAGTGGACCCTCTCCTCTCTTCAGGAGCATCTCATTATGTTCTGCCTCAAGTGGAGCAACTAGGGCAGTCACAGACTACCATGTCTCAAAACGCCATTACCTTGCCCCCATTTCCTGGTAGGGAGTGTGCTATAGAAGGGAACACCGATCCACAAAACCATCTTTTGTTTGGTTTTAACATAGAGCCCTCATCACATCTAGTTTACAATGAGATGTCTAACCTTAAGAGGGTCAATAGCAACTGTGACTCATCAACTGCACCTTTTCAATCTTCCACCTACTTGAATACAACAGGTGCTGATTCTTCTCTGAATCCTGGATTGACACACGGCGTCGGTGAGTCGGGCTTCATGCAAACTCCAGAAAATGGAGGTCAAGGAAACCCACAAAACAAAACCTTTGTGAAGGTGAGCTTTTTATGCTGGGACTAATATCTTTCGAACCAACATCTTGATTTTCACTCTTTTGCCACGTTGCGTTTCACAAAAGTTTACTTATTGTAAGTACTGCATTTTTACATGATAATTTAATCTCTCTATTCGCAGGTTTACAAGTCAGGGTCCTTCGGAAGATCGTTGGATATCACCAAATTCTCCAACTACCCCGAGCTACGCAGCGAGCTTGCTCGTATGTTTGGGCTTGAAGGTGAGTTGGAGGACCCTGTAAGATCAGGCTGGCAGCTTGTATTTGTTGATCAAGAGAATGATGTTCTTCTCCTCGGTGATGGTCCATGGCCGTAAGTACTCCACATTCCTTGCCTTGTTCTTTGTTTAATTTTTTAATAATGAAAGAGATAAATTGGAGAATCTATTTTCAATCGAATGGTAGTTTTATTAACCACTGAATTACATAAACGTCGTTGTTAACTTGTTGTCGCGTGATATTTTGGATGACAGGGAATTTGTAAATAGTGTATGGTGCATCAAGATACTTTCCCCTCAGGAAGTGCAGCAAATGGGGACCAATGGTCTAGAGCTTCTGAACTCAGCTCCAACCCAGAGGCTCTCTAATGGTATCTGTGATGACTACACTGGCCGTGAGGACTCAAGAAATTTAAGCACCGGGCTAACAACTGTGGGGTCTTTAGACTACTGA
Protein sequence

>MS.gene023349.t1

MKLSSAGFSPPPQEGEKRVLDSELWHACAGPLVCLPADGSRVVYFPQGHSEQVAVSTNREVDTYIPNPSLPPQLICQLHNLTMHADTETDEVYAQMTLQPLNPEEQKEAYLPAELGTANKQPTNYFCKILTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHGNDWKFKHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQHMMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPGLPSFHGLKDDDFGMNSPLLWLRDADRGLQTLNFQGMGVNPWMQARLDPSIMNLQPDMYQAMAAAALQDMRTLDPSKQHPASLLQFQQPQNFPNGNAALMQNQMLQQSQPHQAFPKNQESQHPSQSQAQTQQFQQLLQHQHSFTNQNYHQQQQQQQQQQQQQHQQQQQQQQLQQQQSQQQQQVVDHQQMSNAVSTMSQFVSAPPSQSTQPMQAISSIGHQQNFSDSNGNPVSPLHNMLGSFSNDETSHLLNFPRPNSWVPVQSSTARPSKRVAVDPLLSSGASHYVLPQVEQLGQSQTTMSQNAITLPPFPGRECAIEGNTDPQNHLLFGFNIEPSSHLVYNEMSNLKRVNSNCDSSTAPFQSSTYLNTTGADSSLNPGLTHGVGESGFMQTPENGGQGNPQNKTFVKVYKSGSFGRSLDITKFSNYPELRSELARMFGLEGELEDPVRSGWQLVFVDQENDVLLLGDGPWPEFVNSVWCIKILSPQEVQQMGTNGLELLNSAPTQRLSNGICDDYTGREDSRNLSTGLTTVGSLDY