AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene64198

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene64198.t1 MTR_1g024025 95.481 863 36 2 1 863 1 860 0.0 1705
MS.gene64198.t1 MTR_1g024025 78.711 357 23 2 507 863 962 1265 0.0 558
MS.gene64198.t1 MTR_1g024025 46.816 267 83 11 220 472 846 1067 2.24e-39 158
MS.gene64198.t1 MTR_2g018690 67.847 367 114 3 35 398 15 380 1.35e-167 510
MS.gene64198.t1 MTR_5g076270 68.120 367 113 3 35 398 16 381 2.23e-167 508
MS.gene64198.t1 MTR_5g076270 41.060 151 71 3 730 862 670 820 1.10e-25 114
MS.gene64198.t1 MTR_4g124900 72.886 343 90 3 35 376 15 355 2.43e-167 515
MS.gene64198.t1 MTR_4g124900 39.631 217 120 4 634 849 856 1062 6.80e-34 140
MS.gene64198.t1 MTR_4g124900 72.886 343 90 3 35 376 15 355 3.47e-167 515
MS.gene64198.t1 MTR_4g124900 39.631 217 120 4 634 849 879 1085 6.84e-34 140
MS.gene64198.t1 MTR_3g064050 68.219 365 112 3 37 398 20 383 1.49e-166 506
MS.gene64198.t1 MTR_3g064050 42.763 152 84 2 712 862 679 828 3.96e-27 119
MS.gene64198.t1 MTR_2g043250 71.137 343 96 3 35 376 15 355 3.51e-163 505
MS.gene64198.t1 MTR_2g043250 60.952 105 41 0 745 849 974 1078 1.23e-32 137
MS.gene64198.t1 MTR_8g079492 66.757 367 117 4 35 398 15 379 2.12e-160 492
MS.gene64198.t1 MTR_8g079492 50.806 124 61 0 739 862 764 887 9.38e-31 130
MS.gene64198.t1 MTR_8g079492 66.757 367 117 4 35 398 15 379 2.42e-160 491
MS.gene64198.t1 MTR_8g079492 50.806 124 61 0 739 862 763 886 9.52e-31 130
MS.gene64198.t1 MTR_8g101360 68.047 338 107 1 40 376 28 365 2.30e-149 468
MS.gene64198.t1 MTR_8g101360 39.806 206 100 6 649 849 890 1076 5.28e-34 141
MS.gene64198.t1 MTR_8g079492 67.114 298 94 3 104 398 1 297 1.07e-126 401
MS.gene64198.t1 MTR_8g079492 50.806 124 61 0 739 862 681 804 7.71e-31 130
MS.gene64198.t1 MTR_8g100050 53.687 339 154 3 39 376 55 391 5.94e-119 378
MS.gene64198.t1 MTR_2g005240 53.846 338 154 2 39 376 19 354 4.83e-118 374
MS.gene64198.t1 MTR_2g005240 48.387 93 44 3 756 846 546 636 9.57e-18 88.6
MS.gene64198.t1 MTR_8g100050 53.687 339 154 3 39 376 55 391 5.63e-118 378
MS.gene64198.t1 MTR_8g100050 42.857 91 50 2 757 846 710 799 5.05e-15 80.1
MS.gene64198.t1 MTR_2g093740 51.852 351 154 6 43 381 56 403 1.47e-111 357
MS.gene64198.t1 MTR_8g027440 51.009 347 165 4 31 376 16 358 2.74e-111 356
MS.gene64198.t1 MTR_8g027440 41.593 113 57 4 747 855 545 652 1.27e-15 81.6
MS.gene64198.t1 MTR_2g093740 51.852 351 154 6 43 381 56 403 9.80e-111 357
MS.gene64198.t1 MTR_2g093740 47.143 70 35 2 757 825 682 750 3.35e-14 77.4
MS.gene64198.t1 MTR_2g093740 51.852 351 154 6 43 381 56 403 1.48e-110 358
MS.gene64198.t1 MTR_2g093740 42.308 104 58 2 757 859 682 784 4.62e-18 89.7
MS.gene64198.t1 MTR_2g093740 50.000 364 154 7 43 381 56 416 7.58e-108 348
MS.gene64198.t1 MTR_2g093740 50.000 364 154 7 43 381 56 416 7.40e-107 347
MS.gene64198.t1 MTR_2g093740 47.143 70 35 2 757 825 695 763 3.92e-14 77.0
MS.gene64198.t1 MTR_2g093740 50.000 364 154 7 43 381 56 416 1.13e-106 348
MS.gene64198.t1 MTR_2g093740 42.308 104 58 2 757 859 695 797 5.60e-18 89.7
MS.gene64198.t1 MTR_2g014770 50.867 346 147 6 43 376 53 387 1.68e-105 338
MS.gene64198.t1 MTR_4g060460 49.857 349 154 6 43 376 54 396 7.99e-105 342
MS.gene64198.t1 MTR_4g060460 45.055 91 48 2 757 846 658 747 2.62e-18 90.5
MS.gene64198.t1 MTR_4g060460 49.857 349 154 6 43 376 54 396 8.51e-105 342
MS.gene64198.t1 MTR_4g060460 45.055 91 48 2 757 846 663 752 2.52e-18 90.5
MS.gene64198.t1 MTR_2g014770 50.867 346 147 6 43 376 53 387 1.46e-104 338
MS.gene64198.t1 MTR_4g088210 47.721 373 157 8 43 393 38 394 1.11e-103 337
MS.gene64198.t1 MTR_4g088210 47.721 373 157 8 43 393 38 394 1.33e-103 337
MS.gene64198.t1 MTR_4g021580 50.877 342 153 7 41 376 17 349 1.38e-103 334
MS.gene64198.t1 MTR_4g021580 50.877 342 153 7 41 376 17 349 2.60e-103 335
MS.gene64198.t1 MTR_4g021580 41.441 111 59 4 750 859 550 655 1.38e-15 81.6
MS.gene64198.t1 MTR_7g062540 47.384 344 174 5 35 376 6 344 5.37e-100 326
MS.gene64198.t1 MTR_7g062540 42.857 91 49 2 757 846 570 658 1.62e-14 78.2
MS.gene64198.t1 MTR_2g093740 53.629 248 113 2 135 381 27 273 1.18e-82 278
MS.gene64198.t1 MTR_2g093740 47.143 70 35 2 757 825 552 620 2.78e-14 77.4
MS.gene64198.t1 MTR_2g093740 53.629 248 113 2 135 381 27 273 1.83e-82 279
MS.gene64198.t1 MTR_2g093740 42.308 104 58 2 757 859 552 654 3.33e-18 90.1
MS.gene64198.t1 MTR_2g093740 50.958 261 113 3 135 381 27 286 4.73e-79 268
MS.gene64198.t1 MTR_2g093740 47.143 70 35 2 757 825 565 633 3.02e-14 77.0
MS.gene64198.t1 MTR_2g093740 50.958 261 113 3 135 381 27 286 6.92e-79 270
MS.gene64198.t1 MTR_2g093740 42.308 104 58 2 757 859 565 667 3.78e-18 89.7
MS.gene64198.t1 MTR_2g094570 40.741 378 177 8 38 376 6 375 6.92e-79 269
MS.gene64198.t1 MTR_2g094570 40.741 378 177 8 38 376 6 375 1.08e-78 269
MS.gene64198.t1 MTR_1g064430 37.984 387 187 6 36 376 20 399 1.24e-78 269
MS.gene64198.t1 MTR_1g064430 37.984 387 187 6 36 376 33 412 1.58e-78 269
MS.gene64198.t1 MTR_2g094570 40.741 378 177 8 38 376 62 431 3.00e-78 269
MS.gene64198.t1 MTR_4g058930 40.365 384 172 8 40 376 9 382 7.16e-77 263
MS.gene64198.t1 MTR_4g058930 40.365 384 172 8 40 376 9 382 1.73e-76 263
MS.gene64198.t1 MTR_1g094960 38.191 398 196 10 38 394 14 402 5.31e-76 260
MS.gene64198.t1 MTR_7g101280 35.437 412 191 10 36 385 24 422 1.77e-70 245
MS.gene64198.t1 MTR_0041s0110 35.437 412 191 10 36 385 24 422 1.77e-70 245
MS.gene64198.t1 MTR_7g101275 38.050 318 177 6 52 361 1 306 3.94e-66 227
MS.gene64198.t1 MTR_8g446900 41.751 297 159 7 84 376 2 288 6.28e-66 225
MS.gene64198.t1 MTR_3g073420 36.693 387 201 7 39 387 15 395 1.34e-65 231
MS.gene64198.t1 MTR_0041s0120 34.835 333 179 8 52 361 1 318 6.40e-58 204
MS.gene64198.t1 MTR_5g061220 34.959 369 195 10 38 376 14 367 1.91e-57 206
MS.gene64198.t1 MTR_5g040880 32.874 435 245 15 37 457 5 406 2.18e-57 206
MS.gene64198.t1 MTR_5g082140 34.301 379 211 13 38 394 7 369 4.66e-54 195
MS.gene64198.t1 MTR_1g058210 31.880 367 222 10 38 394 7 355 9.64e-49 179
MS.gene64198.t1 MTR_2g024430 35.043 351 181 14 43 376 20 340 5.71e-47 176
MS.gene64198.t1 MTR_3g064050 62.329 146 54 1 254 398 1 146 2.64e-46 176
MS.gene64198.t1 MTR_3g064050 42.763 152 84 2 712 862 442 591 2.20e-27 118
MS.gene64198.t1 MTR_2g006270 33.038 339 207 10 43 376 13 336 2.34e-42 161
MS.gene64198.t1 MTR_2g006380 30.058 346 209 12 40 376 17 338 9.09e-40 154
MS.gene64198.t1 MTR_5g040740 32.317 328 187 11 40 355 9 313 1.85e-39 151
MS.gene64198.t1 MTR_5g060630 31.407 398 213 16 38 396 7 383 8.41e-38 149
MS.gene64198.t1 MTR_5g460740 31.407 398 213 16 38 396 7 383 8.41e-38 149
MS.gene64198.t1 MTR_5g032260 50.993 151 65 2 247 397 30 171 7.96e-37 144
MS.gene64198.t1 MTR_5g074840 47.059 187 63 4 125 307 7 161 6.37e-36 134
MS.gene64198.t1 MTR_5g060780 28.324 346 220 8 40 376 9 335 1.75e-32 131
MS.gene64198.t1 MTR_5g460920 28.448 348 217 10 40 376 9 335 3.77e-32 130
MS.gene64198.t1 MTR_5g062970 34.300 207 127 4 39 242 34 234 4.24e-32 125
MS.gene64198.t1 MTR_5g061890 28.324 346 220 8 40 376 9 335 1.54e-31 128
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene64198.t1 AT1G19850 59.280 889 293 20 19 861 32 897 0.0 971
MS.gene64198.t1 AT1G19850 59.280 889 293 20 19 861 21 886 0.0 970
MS.gene64198.t1 AT1G30330 67.925 371 115 3 31 398 11 380 2.18e-167 510
MS.gene64198.t1 AT1G30330 51.667 120 58 0 737 856 774 893 4.67e-31 131
MS.gene64198.t1 AT1G30330 67.655 371 116 3 31 398 13 382 2.36e-166 508
MS.gene64198.t1 AT1G30330 51.667 120 58 0 737 856 776 895 5.02e-31 131
MS.gene64198.t1 AT1G30330 67.655 371 116 3 31 398 13 382 2.36e-166 508
MS.gene64198.t1 AT1G30330 51.667 120 58 0 737 856 776 895 5.02e-31 131
MS.gene64198.t1 AT1G19220 68.365 373 110 5 35 403 15 383 1.90e-165 510
MS.gene64198.t1 AT1G19220 44.578 166 84 4 687 849 890 1050 4.11e-32 135
MS.gene64198.t1 AT5G37020 66.846 371 118 4 31 398 11 379 6.18e-165 499
MS.gene64198.t1 AT5G37020 53.623 69 32 0 757 825 705 773 7.77e-18 89.0
MS.gene64198.t1 AT5G37020 66.846 371 118 4 31 398 11 379 3.31e-164 498
MS.gene64198.t1 AT5G37020 51.613 93 45 0 757 849 705 797 2.12e-24 110
MS.gene64198.t1 AT5G20730 70.262 343 99 3 35 376 16 356 4.74e-158 493
MS.gene64198.t1 AT5G20730 59.406 101 41 0 749 849 1029 1129 1.82e-31 133
MS.gene64198.t1 AT5G20730 70.058 344 99 4 35 376 16 357 1.91e-156 488
MS.gene64198.t1 AT5G20730 59.406 101 41 0 749 849 1030 1130 1.74e-31 133
MS.gene64198.t1 AT5G20730 70.058 344 99 4 35 376 16 357 4.28e-156 488
MS.gene64198.t1 AT5G20730 59.406 101 41 0 749 849 1030 1130 2.04e-31 133
MS.gene64198.t1 AT5G62000 56.140 342 141 4 39 376 57 393 7.72e-123 392
MS.gene64198.t1 AT5G62000 37.931 145 79 4 706 845 683 821 2.43e-18 90.9
MS.gene64198.t1 AT5G62000 56.140 342 141 4 39 376 57 393 7.72e-123 392
MS.gene64198.t1 AT5G62000 37.931 145 79 4 706 845 683 821 2.43e-18 90.9
MS.gene64198.t1 AT5G62000 56.140 342 141 4 39 376 57 393 7.72e-123 392
MS.gene64198.t1 AT5G62000 37.931 145 79 4 706 845 683 821 2.43e-18 90.9
MS.gene64198.t1 AT5G62000 56.140 342 141 4 39 376 57 393 7.72e-123 392
MS.gene64198.t1 AT5G62000 37.931 145 79 4 706 845 683 821 2.43e-18 90.9
MS.gene64198.t1 AT5G62000 56.140 342 141 4 39 376 57 393 8.95e-123 391
MS.gene64198.t1 AT5G62000 35.838 173 88 6 706 861 683 849 1.08e-18 92.0
MS.gene64198.t1 AT5G37020 65.614 285 94 3 117 398 1 284 1.65e-117 374
MS.gene64198.t1 AT5G37020 51.613 93 45 0 757 849 610 702 1.29e-24 110
MS.gene64198.t1 AT1G59750 53.216 342 150 4 39 376 18 353 5.60e-115 365
MS.gene64198.t1 AT1G59750 48.039 102 49 3 756 855 536 635 6.09e-19 92.4
MS.gene64198.t1 AT1G59750 53.216 342 150 4 39 376 18 353 6.69e-115 365
MS.gene64198.t1 AT1G59750 48.039 102 49 3 756 855 541 640 5.69e-19 92.4
MS.gene64198.t1 AT1G59750 53.216 342 150 4 39 376 18 353 6.69e-115 365
MS.gene64198.t1 AT1G59750 48.039 102 49 3 756 855 541 640 5.69e-19 92.4
MS.gene64198.t1 AT1G59750 53.216 342 150 4 39 376 18 353 7.46e-115 365
MS.gene64198.t1 AT1G59750 48.039 102 49 3 756 855 538 637 6.06e-19 92.4
MS.gene64198.t1 AT2G46530 51.429 350 162 6 40 386 18 362 1.86e-111 354
MS.gene64198.t1 AT2G46530 40.000 95 54 2 757 850 490 582 1.86e-14 77.8
MS.gene64198.t1 AT2G46530 51.429 350 162 6 40 386 39 383 2.72e-111 354
MS.gene64198.t1 AT2G46530 40.000 95 54 2 757 850 511 603 2.22e-14 77.8
MS.gene64198.t1 AT3G61830 52.212 339 154 6 40 376 22 354 7.20e-110 350
MS.gene64198.t1 AT3G61830 46.739 92 44 3 757 846 489 577 7.50e-15 79.0
MS.gene64198.t1 AT5G60450 50.838 358 161 7 35 381 33 386 6.16e-108 350
MS.gene64198.t1 AT5G60450 38.835 103 61 2 757 858 641 742 1.70e-16 84.7
MS.gene64198.t1 AT4G23980 52.326 344 147 6 40 376 9 342 1.75e-107 345
MS.gene64198.t1 AT4G23980 46.154 91 46 2 757 846 521 609 2.15e-15 80.9
MS.gene64198.t1 AT4G23980 52.326 344 147 6 40 376 9 342 1.83e-107 345
MS.gene64198.t1 AT4G23980 46.154 91 46 2 757 846 523 611 2.12e-15 80.9
MS.gene64198.t1 AT5G60450 51.275 353 157 7 40 381 62 410 3.78e-107 348
MS.gene64198.t1 AT5G60450 38.835 103 61 2 757 858 665 766 1.79e-16 84.7
MS.gene64198.t1 AT2G33860 49.570 349 157 4 43 381 54 393 5.74e-104 335
MS.gene64198.t1 AT3G61830 51.623 308 141 6 71 376 2 303 2.04e-94 307
MS.gene64198.t1 AT3G61830 46.739 92 44 3 757 846 438 526 5.76e-15 79.3
MS.gene64198.t1 AT1G34410 44.737 342 181 5 35 376 19 352 5.13e-93 305
MS.gene64198.t1 AT1G34410 40.909 88 49 2 757 843 511 596 4.21e-12 70.5
MS.gene64198.t1 AT1G35540 43.860 342 184 6 35 376 19 352 7.44e-91 300
MS.gene64198.t1 AT1G35540 40.000 90 51 2 757 845 510 597 1.89e-12 71.6
MS.gene64198.t1 AT1G35240 43.567 342 185 5 35 376 19 352 1.00e-89 296
MS.gene64198.t1 AT1G35240 42.045 88 48 2 757 843 497 582 2.95e-12 70.9
MS.gene64198.t1 AT1G35520 44.611 334 177 6 43 376 27 352 4.46e-88 292
MS.gene64198.t1 AT1G35520 40.741 81 45 2 757 836 511 589 2.36e-11 67.8
MS.gene64198.t1 AT1G34310 43.567 342 185 6 35 376 19 352 3.52e-87 289
MS.gene64198.t1 AT1G34310 39.506 81 46 2 757 836 511 589 6.20e-11 66.6
MS.gene64198.t1 AT1G34390 44.737 342 179 7 35 376 19 350 2.69e-85 285
MS.gene64198.t1 AT1G34170 41.071 336 188 6 43 376 25 352 8.08e-81 270
MS.gene64198.t1 AT2G33860 55.085 236 105 1 146 381 2 236 1.57e-78 262
MS.gene64198.t1 AT2G46530 50.545 275 128 6 116 386 5 275 1.67e-78 264
MS.gene64198.t1 AT2G46530 40.000 95 54 2 757 850 403 495 1.09e-14 78.2
MS.gene64198.t1 AT2G28350 38.760 387 179 8 38 376 5 381 3.19e-77 265
MS.gene64198.t1 AT2G28350 38.760 387 179 8 38 376 5 381 5.37e-77 265
MS.gene64198.t1 AT4G30080 39.043 397 188 11 35 389 11 395 1.48e-76 263
MS.gene64198.t1 AT1G34170 38.988 336 169 5 43 376 25 326 4.41e-74 251
MS.gene64198.t1 AT1G34170 38.988 336 169 5 43 376 25 326 2.80e-73 250
MS.gene64198.t1 AT1G77850 36.170 376 191 9 38 376 14 377 7.62e-60 214
MS.gene64198.t1 AT1G77850 36.074 377 192 9 37 376 13 377 7.65e-60 214
MS.gene64198.t1 AT1G43950 44.076 211 111 5 35 245 19 222 1.22e-47 169

Find 170 sgRNAs with CRISPR-Local

Find 305 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACAATGAATGCATGTTAA+AGG 0.173174 1.3:-1388046 None:intergenic
CTTCTTATTCTGCAGATATA+TGG 0.173372 1.3:+1387308 MS.gene64198:intron
GCCGTTGCAATCCGGATATT+TGG 0.177793 1.3:+1387664 MS.gene64198:CDS
AAATACAGAAAATCTGTTTA+TGG 0.194457 1.3:+1387139 MS.gene64198:CDS
GGAAAGATGAAAAGGCTTTC+TGG 0.205659 1.3:-1387617 None:intergenic
CATAATTATCCCACACTTCT+TGG 0.212825 1.3:-1388452 None:intergenic
AGACATTAAATTCAGAATTA+TGG 0.240617 1.3:+1385139 MS.gene64198:CDS
TTAGAACCAGGCCACCTTAA+AGG 0.260988 1.3:-1387360 None:intergenic
AGCAAAATCGGGTTAGTGTT+TGG 0.286566 1.3:+1387582 MS.gene64198:CDS
CTTTCAGCTGGCATGAGATT+TGG 0.299456 1.3:+1387169 MS.gene64198:CDS
TTTAGTCCAAACTCAGATAC+TGG 0.303459 1.3:-1385794 None:intergenic
GTGCTTGAAAGGTGAACTTT+TGG 0.314555 1.3:-1388003 None:intergenic
TTGTTGCATGATAGGTAAAA+AGG 0.323540 1.3:-1387920 None:intergenic
CGCGCAATTGAATGCATGTT+TGG 0.329869 1.3:+1389028 MS.gene64198:CDS
TTCTAAGTGGCGAAATATTC+AGG 0.333372 1.3:+1387377 MS.gene64198:CDS
TTCTTATTCTGCAGATATAT+GGG 0.354261 1.3:+1387309 MS.gene64198:intron
TGAGCAAAAGTCGTCGAAAA+TGG 0.355292 1.3:-1388595 None:intergenic
CCGTTGCAATCCGGATATTT+GGG 0.360826 1.3:+1387665 MS.gene64198:CDS
TGCATGTTAAAGGTGTTATT+AGG 0.363217 1.3:-1388036 None:intergenic
GCAAAATCGGGTTAGTGTTT+GGG 0.363557 1.3:+1387583 MS.gene64198:CDS
TGCTAGTTGGAGATGATCCT+TGG 0.365242 1.3:+1389125 MS.gene64198:CDS
GATGGAAGACTAGGGTAGTT+TGG 0.373410 1.3:-1385461 None:intergenic
GCATAATCTTGTTGCATGAT+AGG 0.375254 1.3:-1387928 None:intergenic
AATACAGAAAATCTGTTTAT+GGG 0.375476 1.3:+1387140 MS.gene64198:CDS
GTTTGTTTGTCGGCTCAAAA+AGG 0.375508 1.3:+1386519 MS.gene64198:CDS
GCTGTTTACAATAGAAGAAT+CGG 0.384358 1.3:-1388343 None:intergenic
TTTGATTATAATATGTTAGT+TGG 0.389191 1.3:-1388209 None:intergenic
GTGTTTCCAGTATCTGAGTT+TGG 0.389251 1.3:+1385788 MS.gene64198:CDS
TTGTAAATAAACAGGCTGAA+TGG 0.397672 1.3:+1387537 MS.gene64198:intron
CACACTTCTTGGTTCATTGA+AGG 0.399760 1.3:-1388441 None:intergenic
GTTAAAGAGATGAGTGAAGA+AGG 0.411917 1.3:+1389343 MS.gene64198:CDS
CATGGCTTCCTTAGAAGAAA+AGG 0.416918 1.3:+1384898 None:intergenic
TGTAAATAAACAGGCTGAAT+GGG 0.419597 1.3:+1387538 MS.gene64198:intron
TTCTGCAGAATAATAACTCT+TGG 0.422237 1.3:+1388793 MS.gene64198:CDS
TCAGTGATGTCGATCCTTTA+AGG 0.425306 1.3:+1387346 MS.gene64198:CDS
CTGAATGACACAAAAGGTTC+CGG 0.425971 1.3:+1389064 MS.gene64198:CDS
ATGTTACCTTTGTGTAGGTT+CGG 0.426676 1.3:-1388836 None:intergenic
CACCCTCAAGATTGCATGGT+TGG 0.430745 1.3:+1388639 MS.gene64198:CDS
TTGTTGCAGCTTTCAAAAGA+TGG 0.431109 1.3:-1388162 None:intergenic
GATGTTTGAGACCGAGGAAT+CGG 0.432905 1.3:+1387195 MS.gene64198:CDS
GAACAACTAGTTCTTGAGTT+GGG 0.432917 1.3:-1386034 None:intergenic
GGTGTGGTGATAAGCAAAAT+CGG 0.435666 1.3:+1387570 MS.gene64198:CDS
GTCGATCCTTTAAGGTGGCC+TGG 0.437670 1.3:+1387354 MS.gene64198:CDS
ATTGTTGAAAAGTGAGCAAC+CGG 0.440957 1.3:+1388062 MS.gene64198:CDS
CTTGTGTCATTGCCTCAAGT+GGG 0.444777 1.3:+1385180 MS.gene64198:CDS
CTAAAACGGCCGTTGCAATC+CGG 0.447348 1.3:+1387656 MS.gene64198:CDS
CTTTGACTTCAAGCCTAAAA+CGG 0.447527 1.3:+1387642 MS.gene64198:CDS
CTCATCTCTTTAACTTCTGA+AGG 0.449266 1.3:-1389334 None:intergenic
GATCTTGTGTAGGGAATTTG+TGG 0.451328 1.3:+1389282 MS.gene64198:intron
CGCAATTGCGAGTTGGTGTA+AGG 0.454613 1.3:+1386860 MS.gene64198:CDS
GGAAAAGCTGTTTCCTCCAT+TGG 0.458270 1.3:+1385910 MS.gene64198:CDS
AGATATATGGGTACAATTGT+AGG 0.463723 1.3:+1387321 MS.gene64198:intron
TATGGGACTCACCTTTCAGC+TGG 0.465604 1.3:+1387157 MS.gene64198:CDS
AAAAGTGTTGGAGGAGTTGT+TGG 0.469435 1.3:+1384923 MS.gene64198:CDS
GAATTATGGCATGCTTGTGC+TGG 0.470225 1.3:+1385153 MS.gene64198:CDS
GCTAGTTGGAGATGATCCTT+GGG 0.470617 1.3:+1389126 MS.gene64198:CDS
TCAAAGAAGGAAAGATGAAA+AGG 0.471141 1.3:-1387625 None:intergenic
TTTAGGCTTGAAGTCAAAGA+AGG 0.471500 1.3:-1387638 None:intergenic
ATTAAAGTACCCGAAAATGA+AGG 0.474465 1.3:+1387805 MS.gene64198:CDS
CATTGACACAAATTTCACTT+TGG 0.474844 1.3:-1388518 None:intergenic
CCTGTTCACTATGTCCTTGA+GGG 0.475837 1.3:-1385221 None:intergenic
AAGAAACGTACCCAAATATC+CGG 0.476983 1.3:-1387675 None:intergenic
GAGAGTGATGTTCTGCTAGT+TGG 0.482377 1.3:+1389112 MS.gene64198:CDS
TAATAGTGTCAGTACCACTA+TGG 0.485813 1.3:+1388551 MS.gene64198:CDS
TCTTGTGTCATTGCCTCAAG+TGG 0.485817 1.3:+1385179 MS.gene64198:CDS
CCCTCAAGGACATAGTGAAC+AGG 0.486634 1.3:+1385221 MS.gene64198:CDS
AAGAGACACCTTCTCACAAC+GGG 0.488034 1.3:+1386491 MS.gene64198:CDS
ACGGGTTGGAGTTTGTTTGT+CGG 0.492443 1.3:+1386509 MS.gene64198:CDS
TCTAACTGAGGCTGCTGCAT+TGG 0.492863 1.3:-1388279 None:intergenic
AGCTTACAGAATTCAGTGGT+TGG 0.493036 1.3:-1385656 None:intergenic
GAAGAAAAGGCTAAAAGTGT+TGG 0.493255 1.3:+1384911 MS.gene64198:CDS
ACCTTTGTGTAGGTTCGGAT+TGG 0.493613 1.3:-1388831 None:intergenic
AAAATGGTGTTTGAAGTAGA+AGG 0.495433 1.3:-1388579 None:intergenic
GGGAAGTCAAACATATGATC+AGG 0.498477 1.3:-1388141 None:intergenic
GAAAAGGCTAAAAGTGTTGG+AGG 0.498865 1.3:+1384914 MS.gene64198:CDS
ATGTTTGAGACCGAGGAATC+GGG 0.501076 1.3:+1387196 MS.gene64198:CDS
AGAGTTGTCTCGCAGAGAAA+AGG 0.502279 1.3:-1388727 None:intergenic
CAGGCTGAATGGGATGAGCC+AGG 0.504340 1.3:+1387548 MS.gene64198:intron
ATCTTGTGTAGGGAATTTGT+GGG 0.505590 1.3:+1389283 MS.gene64198:intron
AACAACTAGTTCTTGAGTTG+GGG 0.512403 1.3:-1386033 None:intergenic
CTGTTTACAATAGAAGAATC+GGG 0.516285 1.3:-1388342 None:intergenic
TACGTATACTAGTTTCCATC+CGG 0.523910 1.3:-1389083 None:intergenic
TGTGTCATTGCCTCAAGTGG+GGG 0.524294 1.3:+1385182 MS.gene64198:CDS
TTAAAGAGATGAGTGAAGAA+GGG 0.524881 1.3:+1389344 MS.gene64198:CDS
TGCCAACCATGCAATCTTGA+GGG 0.526265 1.3:-1388641 None:intergenic
CCGAGGAATCGGGTAAGCGC+AGG 0.529760 1.3:+1387206 MS.gene64198:CDS
GAGATTTGCATGATAATACA+TGG 0.533645 1.3:+1386057 MS.gene64198:CDS
CGCAGATAGACGTAGACGAA+TGG 0.538497 1.3:+1388373 MS.gene64198:CDS
AACTTAAGTTCTAGTCAAGA+TGG 0.540183 1.3:+1388663 MS.gene64198:CDS
CCATTGTTGTTGATCACCTG+TGG 0.540797 1.3:-1387895 None:intergenic
GAATGGGATGAGCCAGGGTG+TGG 0.543031 1.3:+1387554 MS.gene64198:CDS
TTCGGTTCCACGCAGAGCTG+CGG 0.543545 1.3:+1385889 MS.gene64198:CDS
CCTGCGCTTACCCGATTCCT+CGG 0.545092 1.3:-1387206 None:intergenic
TTGTGTCATTGCCTCAAGTG+GGG 0.545165 1.3:+1385181 MS.gene64198:CDS
GTGTGGTGATAAGCAAAATC+GGG 0.545815 1.3:+1387571 MS.gene64198:CDS
CGAACAACTAGTTCTTGAGT+TGG 0.551901 1.3:-1386035 None:intergenic
TGTTGCAGCTTTCAAAAGAT+GGG 0.552162 1.3:-1388161 None:intergenic
TCAGCACCCTCAAGATTGCA+TGG 0.555417 1.3:+1388635 MS.gene64198:CDS
GTATGCTCTCTGTGCTTGAA+AGG 0.557270 1.3:-1388014 None:intergenic
TGGTATGATGTTTGAGACCG+AGG 0.557923 1.3:+1387189 MS.gene64198:CDS
TGGAGCATGTCAATCATTTG+AGG 0.562075 1.3:-1388318 None:intergenic
ACCTGTTCACTATGTCCTTG+AGG 0.562382 1.3:-1385222 None:intergenic
TTCAATGAACCAAGAAGTGT+GGG 0.563061 1.3:+1388443 MS.gene64198:CDS
TAGCAGAAGTAATCTGAGAC+TGG 0.563668 1.3:-1388686 None:intergenic
TCAGCAGAAAGTACTGATGA+TGG 0.564399 1.3:-1386910 None:intergenic
AACAACTGAGATGGAAGACT+AGG 0.565825 1.3:-1385470 None:intergenic
CAAATCTCATGCCAGCTGAA+AGG 0.565921 1.3:-1387168 None:intergenic
TGTGGACTTCATATCTTGCA+AGG 0.568033 1.3:-1387965 None:intergenic
CTGAACAGCGGAGCATTGCA+AGG 0.572206 1.3:+1389376 MS.gene64198:CDS
TGGTTCATTGAAGGTATCGA+GGG 0.572733 1.3:-1388432 None:intergenic
AACTCCAACCCGTTGTGAGA+AGG 0.573060 1.3:-1386499 None:intergenic
AAATAATGTTACCTTTGTGT+AGG 0.573136 1.3:-1388841 None:intergenic
GTTGTGAGAAGGTGTCTCTT+CGG 0.575157 1.3:-1386488 None:intergenic
CTTGTCTATTACTTCCCTCA+AGG 0.578102 1.3:+1385207 MS.gene64198:CDS
GGATTGTAGAAAATCGTGAA+TGG 0.579311 1.3:-1386988 None:intergenic
CTATGATGCAGAAAATGAGT+GGG 0.579800 1.3:+1387759 MS.gene64198:intron
AATTGAATGCATGTTTGGAC+TGG 0.580066 1.3:+1389033 MS.gene64198:CDS
TTGCCAACCATGCAATCTTG+AGG 0.582580 1.3:-1388642 None:intergenic
TAATACAAAATTAGAATCTG+AGG 0.583985 1.3:+1388113 MS.gene64198:CDS
CTTCAATGAACCAAGAAGTG+TGG 0.584734 1.3:+1388442 MS.gene64198:CDS
TAAGGTGGCCTGGTTCTAAG+TGG 0.586460 1.3:+1387364 MS.gene64198:CDS
ATATTTCGCCACTTAGAACC+AGG 0.586883 1.3:-1387372 None:intergenic
GAACTAGTATGAGCGAGTAA+TGG 0.586998 1.3:-1388252 None:intergenic
GACACCTTCTCACAACGGGT+TGG 0.588416 1.3:+1386495 MS.gene64198:CDS
CTATATAGCCTTACCAATGG+AGG 0.589175 1.3:-1385923 None:intergenic
ACTTGACACAACAACTGAGA+TGG 0.591159 1.3:-1385479 None:intergenic
GTGTCATTGCCTCAAGTGGG+GGG 0.591608 1.3:+1385183 MS.gene64198:CDS
ATCGAGGGATTCACTACTTG+AGG 0.592078 1.3:-1388417 None:intergenic
TCGATTAGCAGCTGCATGAG+CGG 0.593060 1.3:-1386962 None:intergenic
CCCAAATATCCGGATTGCAA+CGG 0.593442 1.3:-1387665 None:intergenic
TGGATTCTCTATAACCTGTG+TGG 0.593849 1.3:-1387983 None:intergenic
TTACAATAGAAGAATCGGGT+TGG 0.596283 1.3:-1388338 None:intergenic
TTGGTTCATTGAAGGTATCG+AGG 0.596449 1.3:-1388433 None:intergenic
AGTGTTGGAGGAGTTGTTGG+TGG 0.597797 1.3:+1384926 MS.gene64198:CDS
ATATAGCTTACAGAATTCAG+TGG 0.600450 1.3:-1385660 None:intergenic
AGGCTGAATGGGATGAGCCA+GGG 0.604797 1.3:+1387549 MS.gene64198:intron
GAGAAGTCGCAATTGCGAGT+TGG 0.609632 1.3:+1386853 MS.gene64198:CDS
GGGTGAGAAACTTACTCCCA+AGG 0.617581 1.3:-1389142 None:intergenic
ACAACTAGTTCTTGAGTTGG+GGG 0.617960 1.3:-1386032 None:intergenic
ATGACACAAAAGGTTCCGGA+TGG 0.629064 1.3:+1389068 MS.gene64198:CDS
GGTCTGCTGAATGACACAAA+AGG 0.630277 1.3:+1389058 MS.gene64198:CDS
TACTTTCATCAAAATCAACA+TGG 0.633033 1.3:-1388767 None:intergenic
AAAGAAATGCAAGAACATTG+TGG 0.633626 1.3:+1384980 MS.gene64198:CDS
ACAACTGAGATGGAAGACTA+GGG 0.639765 1.3:-1385469 None:intergenic
ACTTGAGGCAATGACACAAG+AGG 0.641095 1.3:-1385177 None:intergenic
GTGGACTTCATATCTTGCAA+GGG 0.645449 1.3:-1387964 None:intergenic
AGTGGAATAACAAAATTCGA+AGG 0.656897 1.3:-1387112 None:intergenic
CCACAGGTGATCAACAACAA+TGG 0.657687 1.3:+1387895 MS.gene64198:CDS
GACATTGATGATTCTAACTG+AGG 0.657820 1.3:-1388291 None:intergenic
CATTCGTCTACGTCTATCTG+CGG 0.660180 1.3:-1388372 None:intergenic
GCTAGTGATACTAGCACACA+TGG 0.660819 1.3:+1385860 MS.gene64198:CDS
TCTCTGCGAGACAACTCTGG+TGG 0.660933 1.3:+1388732 MS.gene64198:CDS
AGTAGAAGGATCAACCATAG+TGG 0.662515 1.3:-1388565 None:intergenic
ACCCGAAAATGAAGGAACAG+TGG 0.665241 1.3:+1387813 MS.gene64198:CDS
CTTGAGGCAATGACACAAGA+GGG 0.667127 1.3:-1385176 None:intergenic
CAAACATGCATTCAATTGCG+CGG 0.668814 1.3:-1389027 None:intergenic
GAATGCATGTTTGGACTGGA+CGG 0.670392 1.3:+1389037 MS.gene64198:CDS
GGGATGAAGCTTCTGAACAG+CGG 0.672458 1.3:+1389364 MS.gene64198:CDS
TCTTGTGTAGGGAATTTGTG+GGG 0.680812 1.3:+1389284 MS.gene64198:intron
TCTATGATGCAGAAAATGAG+TGG 0.683454 1.3:+1387758 MS.gene64198:intron
GCAAGATATGAAGTCCACAC+AGG 0.685567 1.3:+1387969 MS.gene64198:CDS
GTGATGTCGATCCTTTAAGG+TGG 0.692501 1.3:+1387349 MS.gene64198:CDS
AGGGTAGTTTGGAATCTGTG+AGG 0.694049 1.3:-1385450 None:intergenic
TCTGCTGATAGCATGCACAT+TGG 0.695779 1.3:+1386925 MS.gene64198:CDS
TATGATGCAGAAAATGAGTG+GGG 0.696824 1.3:+1387760 MS.gene64198:intron
GTGATAATATTCGTATACAG+CGG 0.703562 1.3:-1389312 None:intergenic
GAAGAGACACCTTCTCACAA+CGG 0.710470 1.3:+1386490 MS.gene64198:CDS
ACCAATCCGAACCTACACAA+AGG 0.719172 1.3:+1388830 MS.gene64198:CDS
ACATTTCGACATATCTACCG+AGG 0.754798 1.3:+1386080 MS.gene64198:CDS
AGTGATACTAGCACACATGG+TGG 0.770082 1.3:+1385863 MS.gene64198:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAGTTTTAATATCTAAAA+AGG - chr1.3:1389249-1389268 None:intergenic 10.0%
!!! AAAGTTTTAATATCTAAAAA+GGG - chr1.3:1389248-1389267 None:intergenic 10.0%
!!! TTTTTAGATATTAAAACTTT+TGG + chr1.3:1389248-1389267 MS.gene64198:intron 10.0%
!!! TTTTTTCTTAATTTTTACAA+TGG + chr1.3:1385023-1385042 MS.gene64198:intron 10.0%
!! AAAAATTAAGAAAAAAGAGA+AGG - chr1.3:1385019-1385038 None:intergenic 15.0%
!! AAATTTCTTTGTAAATAAAC+AGG + chr1.3:1387529-1387548 MS.gene64198:intron 15.0%
!! ATCAAAACATACAATTTAAA+GGG - chr1.3:1385590-1385609 None:intergenic 15.0%
!! ATCTAAAAATATTATATGTC+AGG - chr1.3:1387043-1387062 None:intergenic 15.0%
!! TATCAAAACATACAATTTAA+AGG - chr1.3:1385591-1385610 None:intergenic 15.0%
!! TTTGATTATAATATGTTAGT+TGG - chr1.3:1388212-1388231 None:intergenic 15.0%
!!! AAATTGTATGTTTTGATAAT+AGG + chr1.3:1385593-1385612 MS.gene64198:intron 15.0%
!!! AGATTCTAATTTTGTATTAT+TGG - chr1.3:1388112-1388131 None:intergenic 15.0%
!!! ATTTTGATTTGATTGATATT+TGG + chr1.3:1385087-1385106 MS.gene64198:intron 15.0%
!!! CAATTTTTTCAGATTATTAT+CGG + chr1.3:1386213-1386232 MS.gene64198:intron 15.0%
!!! TAAGTTTAATAGTCTTATTT+TGG + chr1.3:1389196-1389215 MS.gene64198:intron 15.0%
!!! TAATTTTGTATTATTGGTTT+TGG - chr1.3:1388106-1388125 None:intergenic 15.0%
!!! TATTATTTTTCATTTGTGTT+AGG + chr1.3:1385757-1385776 MS.gene64198:intron 15.0%
!! AAATACAGAAAATCTGTTTA+TGG + chr1.3:1387139-1387158 MS.gene64198:CDS 20.0%
!! AAATTTAGGGAAAAAATGTA+AGG - chr1.3:1386454-1386473 None:intergenic 20.0%
!! AATACAGAAAATCTGTTTAT+GGG + chr1.3:1387140-1387159 MS.gene64198:CDS 20.0%
!! AATGGTATATCTTAATAACT+GGG - chr1.3:1387422-1387441 None:intergenic 20.0%
!! AGACATTAAATTCAGAATTA+TGG + chr1.3:1385139-1385158 MS.gene64198:CDS 20.0%
!! ATTGTACATCTAAATGTTAT+TGG + chr1.3:1385716-1385735 MS.gene64198:intron 20.0%
!! ATTTATGTAGAGATGATTAT+TGG - chr1.3:1386796-1386815 None:intergenic 20.0%
!! CTTAATCTTAGTAATATAGT+CGG + chr1.3:1387499-1387518 MS.gene64198:intron 20.0%
!! TAATACAAAATTAGAATCTG+AGG + chr1.3:1388113-1388132 MS.gene64198:CDS 20.0%
!! TCAAAACATACAATTTAAAG+GGG - chr1.3:1385589-1385608 None:intergenic 20.0%
!! TTTCAATATTAGGAAAATTG+TGG + chr1.3:1386735-1386754 MS.gene64198:intron 20.0%
!!! AATATTTTTAGATCTAATCG+TGG + chr1.3:1387050-1387069 MS.gene64198:intron 20.0%
!!! ATAAACAGATTTTCTGTATT+TGG - chr1.3:1387140-1387159 None:intergenic 20.0%
!!! ATGTAATGGTTTTCAATATT+AGG + chr1.3:1386725-1386744 MS.gene64198:intron 20.0%
!!! ATTGTAGTTTTAAGTTTCTT+TGG + chr1.3:1385320-1385339 MS.gene64198:intron 20.0%
!!! GTTGTACTAATTTTTGTTTA+GGG + chr1.3:1385109-1385128 MS.gene64198:intron 20.0%
!!! TAACATTATTTCTGTAATGT+TGG + chr1.3:1388853-1388872 MS.gene64198:intron 20.0%
!!! TTGTACTAATTTTTGTTTAG+GGG + chr1.3:1385110-1385129 MS.gene64198:intron 20.0%
!!! TTTACAATGGTTATGTTTTA+TGG + chr1.3:1385036-1385055 MS.gene64198:intron 20.0%
! AAAACACACTAATCAAATGA+GGG - chr1.3:1385989-1386008 None:intergenic 25.0%
! AAAATAACAAGTTGCTAATC+AGG - chr1.3:1386764-1386783 None:intergenic 25.0%
! AAAATATTATATGTCAGGTG+AGG - chr1.3:1387038-1387057 None:intergenic 25.0%
! AAACATATTTAGGTATACCT+TGG - chr1.3:1387012-1387031 None:intergenic 25.0%
! AAATAATGTTACCTTTGTGT+AGG - chr1.3:1388844-1388863 None:intergenic 25.0%
! ACTGCAACTTTATTATTGTT+TGG + chr1.3:1386361-1386380 MS.gene64198:intron 25.0%
! ATAGTTACATTGCAATGTAA+TGG + chr1.3:1386711-1386730 MS.gene64198:intron 25.0%
! ATGGTATATCTTAATAACTG+GGG - chr1.3:1387421-1387440 None:intergenic 25.0%
! ATTACATTGCAATGTAACTA+TGG - chr1.3:1386712-1386731 None:intergenic 25.0%
! CGACTATATTACTAAGATTA+AGG - chr1.3:1387501-1387520 None:intergenic 25.0%
! CTATAAAACATACTCTATGT+TGG + chr1.3:1387474-1387493 MS.gene64198:intron 25.0%
! CTCTGTTATTATCTGAATAT+AGG + chr1.3:1386625-1386644 MS.gene64198:intron 25.0%
! CTGCAACTTTATTATTGTTT+GGG + chr1.3:1386362-1386381 MS.gene64198:intron 25.0%
! GAATGGTATATCTTAATAAC+TGG - chr1.3:1387423-1387442 None:intergenic 25.0%
! TACTTTCATCAAAATCAACA+TGG - chr1.3:1388770-1388789 None:intergenic 25.0%
! TCAACTATTATAGTTAGTTC+AGG - chr1.3:1387279-1387298 None:intergenic 25.0%
! TGACCTACATGAAAAATTTA+GGG - chr1.3:1386467-1386486 None:intergenic 25.0%
! TGATGTGTTAATTGTTACAA+GGG + chr1.3:1386828-1386847 MS.gene64198:intron 25.0%
! TTCTTATTCTGCAGATATAT+GGG + chr1.3:1387309-1387328 MS.gene64198:intron 25.0%
!! ACCTTCAAAATAATTAGTCT+TGG + chr1.3:1386407-1386426 MS.gene64198:intron 25.0%
!! TTTCCCTAAATTTTTCATGT+AGG + chr1.3:1386461-1386480 MS.gene64198:intron 25.0%
!!! AAGTACAAGACATTTTGATA+AGG - chr1.3:1387716-1387735 None:intergenic 25.0%
!!! AGATTCTAGTTTCTATTGAA+TGG + chr1.3:1385355-1385374 MS.gene64198:intron 25.0%
!!! ATGTCAAGAATTTTAACTTG+AGG + chr1.3:1388472-1388491 MS.gene64198:CDS 25.0%
!!! ATTGGTTTGGTAAAATAAAC+AGG + chr1.3:1386296-1386315 MS.gene64198:intron 25.0%
!!! ATTTTCGGGTACTTTAATAA+AGG - chr1.3:1387803-1387822 None:intergenic 25.0%
!!! GGTTGTACTAATTTTTGTTT+AGG + chr1.3:1385108-1385127 MS.gene64198:intron 25.0%
!!! TCCAAGACTAATTATTTTGA+AGG - chr1.3:1386411-1386430 None:intergenic 25.0%
!!! TGTCAAGAATTTTAACTTGA+GGG + chr1.3:1388473-1388492 MS.gene64198:CDS 25.0%
!!! TGTTTATTTTACCAAACCAA+TGG - chr1.3:1386297-1386316 None:intergenic 25.0%
!!! TTTTCGGGTACTTTAATAAA+GGG - chr1.3:1387802-1387821 None:intergenic 25.0%
AAAACAGTTCAGAAGAATTC+AGG - chr1.3:1387238-1387257 None:intergenic 30.0%
AAAGAAATGCAAGAACATTG+TGG + chr1.3:1384980-1384999 MS.gene64198:CDS 30.0%
ACAACATCGAAAAAGTGAAT+AGG + chr1.3:1388181-1388200 MS.gene64198:CDS 30.0%
AGATATATGGGTACAATTGT+AGG + chr1.3:1387321-1387340 MS.gene64198:intron 30.0%
AGTGGAATAACAAAATTCGA+AGG - chr1.3:1387115-1387134 None:intergenic 30.0%
ATAGTTCAATCTATGTCCAT+TGG + chr1.3:1386278-1386297 MS.gene64198:intron 30.0%
ATATAGCTTACAGAATTCAG+TGG - chr1.3:1385663-1385682 None:intergenic 30.0%
ATCAAACATTACACGAAAGA+AGG - chr1.3:1389166-1389185 None:intergenic 30.0%
ATGTAGAGATGATTATTGGT+TGG - chr1.3:1386792-1386811 None:intergenic 30.0%
CAAAACACACTAATCAAATG+AGG - chr1.3:1385990-1386009 None:intergenic 30.0%
CAACAATGAATGCATGTTAA+AGG - chr1.3:1388049-1388068 None:intergenic 30.0%
CAACATCGAAAAAGTGAATA+GGG + chr1.3:1388182-1388201 MS.gene64198:CDS 30.0%
CATTGACACAAATTTCACTT+TGG - chr1.3:1388521-1388540 None:intergenic 30.0%
CTGACCTACATGAAAAATTT+AGG - chr1.3:1386468-1386487 None:intergenic 30.0%
CTGTTTACAATAGAAGAATC+GGG - chr1.3:1388345-1388364 None:intergenic 30.0%
CTTCTTATTCTGCAGATATA+TGG + chr1.3:1387308-1387327 MS.gene64198:intron 30.0%
GAGATTTGCATGATAATACA+TGG + chr1.3:1386057-1386076 MS.gene64198:CDS 30.0%
GCTGTTTACAATAGAAGAAT+CGG - chr1.3:1388346-1388365 None:intergenic 30.0%
GGTGAGGTATAAACATATTT+AGG - chr1.3:1387022-1387041 None:intergenic 30.0%
GTGATAATATTCGTATACAG+CGG - chr1.3:1389315-1389334 None:intergenic 30.0%
GTGATGTGTTAATTGTTACA+AGG + chr1.3:1386827-1386846 MS.gene64198:intron 30.0%
TCAAACATTACACGAAAGAA+GGG - chr1.3:1389165-1389184 None:intergenic 30.0%
TCAAAGAAGGAAAGATGAAA+AGG - chr1.3:1387628-1387647 None:intergenic 30.0%
TGTAAATAAACAGGCTGAAT+GGG + chr1.3:1387538-1387557 MS.gene64198:intron 30.0%
TTAAAGAGATGAGTGAAGAA+GGG + chr1.3:1389344-1389363 MS.gene64198:CDS 30.0%
TTCGATCTTGTATATCATGA+TGG + chr1.3:1388906-1388925 MS.gene64198:intron 30.0%
TTCTGCAGAATAATAACTCT+TGG + chr1.3:1388793-1388812 MS.gene64198:CDS 30.0%
TTGTAAATAAACAGGCTGAA+TGG + chr1.3:1387537-1387556 MS.gene64198:intron 30.0%
TTGTTGCATGATAGGTAAAA+AGG - chr1.3:1387923-1387942 None:intergenic 30.0%
TTTCAGATTATTATCGGTGT+CGG + chr1.3:1386219-1386238 MS.gene64198:intron 30.0%
! AAAATGGTGTTTGAAGTAGA+AGG - chr1.3:1388582-1388601 None:intergenic 30.0%
! AACTTAAGTTCTAGTCAAGA+TGG + chr1.3:1388663-1388682 MS.gene64198:CDS 30.0%
! ACACCATTAATCTAAAGTGT+AGG - chr1.3:1386141-1386160 None:intergenic 30.0%
! ACATCTTCATCATGTTTTCT+TGG - chr1.3:1387867-1387886 None:intergenic 30.0%
! ATGTTTTCTTGGTAGAGATT+TGG - chr1.3:1387856-1387875 None:intergenic 30.0%
! ATTAAAGTACCCGAAAATGA+AGG + chr1.3:1387805-1387824 MS.gene64198:CDS 30.0%
! CTCATTTGATTAGTGTGTTT+TGG + chr1.3:1385988-1386007 MS.gene64198:intron 30.0%
! GAAGATGTTTTATAAACCAC+AGG + chr1.3:1387879-1387898 MS.gene64198:CDS 30.0%
! GTTTGTGTTTTGTCCTTTTA+AGG + chr1.3:1385400-1385419 MS.gene64198:intron 30.0%
! GTTTTTCTGCAAAACTTTGA+CGG + chr1.3:1385838-1385857 MS.gene64198:CDS 30.0%
!! ACAAGACATTTTGATAAGGT+GGG - chr1.3:1387712-1387731 None:intergenic 30.0%
!! ACTTTTAGCCTTTTCTTCTA+AGG - chr1.3:1384909-1384928 None:intergenic 30.0%
!! TACAAGACATTTTGATAAGG+TGG - chr1.3:1387713-1387732 None:intergenic 30.0%
!! TGCATGTTAAAGGTGTTATT+AGG - chr1.3:1388039-1388058 None:intergenic 30.0%
!!! ATGGATTTTGAGTTTGGTTT+TGG - chr1.3:1388236-1388255 None:intergenic 30.0%
!!! GATTAGTGTGTTTTGGTTTT+AGG + chr1.3:1385995-1386014 MS.gene64198:intron 30.0%
!!! TTCGAATTTTGTTATTCCAC+TGG + chr1.3:1387114-1387133 MS.gene64198:CDS 30.0%
AAGAAACGTACCCAAATATC+CGG - chr1.3:1387678-1387697 None:intergenic 35.0%
AATTGAATGCATGTTTGGAC+TGG + chr1.3:1389033-1389052 MS.gene64198:CDS 35.0%
ACAATGTTGTGATCTTGTGT+AGG + chr1.3:1389272-1389291 MS.gene64198:intron 35.0%
ACAGAGTTTCGTATCATGTT+TGG - chr1.3:1386611-1386630 None:intergenic 35.0%
ATCTTGTGTAGGGAATTTGT+GGG + chr1.3:1389283-1389302 MS.gene64198:intron 35.0%
ATGTTACCTTTGTGTAGGTT+CGG - chr1.3:1388839-1388858 None:intergenic 35.0%
ATTGTTGAAAAGTGAGCAAC+CGG + chr1.3:1388062-1388081 MS.gene64198:CDS 35.0%
CAATGTTGTGATCTTGTGTA+GGG + chr1.3:1389273-1389292 MS.gene64198:intron 35.0%
CATAATTATCCCACACTTCT+TGG - chr1.3:1388455-1388474 None:intergenic 35.0%
CTATGATGCAGAAAATGAGT+GGG + chr1.3:1387759-1387778 MS.gene64198:intron 35.0%
CTTTAGATTAATGGTGTGTC+CGG + chr1.3:1386144-1386163 MS.gene64198:intron 35.0%
GATGGTATTTATTGTGTCTG+TGG + chr1.3:1388924-1388943 MS.gene64198:intron 35.0%
GCACCTACACTTTAGATTAA+TGG + chr1.3:1386135-1386154 MS.gene64198:intron 35.0%
GCATAATCTTGTTGCATGAT+AGG - chr1.3:1387931-1387950 None:intergenic 35.0%
GGAATAAATGTTTGTGCTTG+TGG + chr1.3:1386317-1386336 MS.gene64198:intron 35.0%
GGATTGTAGAAAATCGTGAA+TGG - chr1.3:1386991-1387010 None:intergenic 35.0%
GTTAAAGAGATGAGTGAAGA+AGG + chr1.3:1389343-1389362 MS.gene64198:CDS 35.0%
TAAGGCTATATAGCACTAGT+TGG + chr1.3:1385933-1385952 MS.gene64198:intron 35.0%
TAATAGTGTCAGTACCACTA+TGG + chr1.3:1388551-1388570 MS.gene64198:CDS 35.0%
TATGATGCAGAAAATGAGTG+GGG + chr1.3:1387760-1387779 MS.gene64198:intron 35.0%
TCTATGATGCAGAAAATGAG+TGG + chr1.3:1387758-1387777 MS.gene64198:intron 35.0%
TCTTGAGCGTATTATTTGCA+GGG + chr1.3:1387084-1387103 MS.gene64198:intron 35.0%
TCTTGTACAGCCATAAAAGA+GGG - chr1.3:1385965-1385984 None:intergenic 35.0%
TGAAATGCAACAGCAAAAAG+TGG - chr1.3:1385549-1385568 None:intergenic 35.0%
TGTTGCAGCTTTCAAAAGAT+GGG - chr1.3:1388164-1388183 None:intergenic 35.0%
TTACAATAGAAGAATCGGGT+TGG - chr1.3:1388341-1388360 None:intergenic 35.0%
TTCTAAGTGGCGAAATATTC+AGG + chr1.3:1387377-1387396 MS.gene64198:CDS 35.0%
TTCTTGAGCGTATTATTTGC+AGG + chr1.3:1387083-1387102 MS.gene64198:intron 35.0%
TTCTTGTACAGCCATAAAAG+AGG - chr1.3:1385966-1385985 None:intergenic 35.0%
TTGTTGCAGCTTTCAAAAGA+TGG - chr1.3:1388165-1388184 None:intergenic 35.0%
TTTAGGCTTGAAGTCAAAGA+AGG - chr1.3:1387641-1387660 None:intergenic 35.0%
TTTAGTCCAAACTCAGATAC+TGG - chr1.3:1385797-1385816 None:intergenic 35.0%
! AACAACTAGTTCTTGAGTTG+GGG - chr1.3:1386036-1386055 None:intergenic 35.0%
! AACTATGTGTGTTTGAGATC+AGG - chr1.3:1386188-1386207 None:intergenic 35.0%
! CTCATCTCTTTAACTTCTGA+AGG - chr1.3:1389337-1389356 None:intergenic 35.0%
! CTTTGACTTCAAGCCTAAAA+CGG + chr1.3:1387642-1387661 MS.gene64198:CDS 35.0%
! GAACAACTAGTTCTTGAGTT+GGG - chr1.3:1386037-1386056 None:intergenic 35.0%
! GAAGAAAAGGCTAAAAGTGT+TGG + chr1.3:1384911-1384930 MS.gene64198:CDS 35.0%
! GACATTGATGATTCTAACTG+AGG - chr1.3:1388294-1388313 None:intergenic 35.0%
! GCGATTCTGTTCTTTTTATC+AGG + chr1.3:1386552-1386571 MS.gene64198:CDS 35.0%
! GTTTTGCAGAAAAACTCAGT+TGG - chr1.3:1385833-1385852 None:intergenic 35.0%
! TAATCTAAAGTGTAGGTGCT+AGG - chr1.3:1386134-1386153 None:intergenic 35.0%
! TACGTATACTAGTTTCCATC+CGG - chr1.3:1389086-1389105 None:intergenic 35.0%
! TCAATCTATGTCCATTGGTT+TGG + chr1.3:1386283-1386302 MS.gene64198:intron 35.0%
! TCACGATTTTCTACAATCCA+AGG + chr1.3:1386992-1387011 MS.gene64198:CDS 35.0%
! TTCAATGAACCAAGAAGTGT+GGG + chr1.3:1388443-1388462 MS.gene64198:CDS 35.0%
! TTGCTCACTAGTGGTTATTT+TGG + chr1.3:1387734-1387753 MS.gene64198:intron 35.0%
!! GTTTTGATAATAGGCTGACA+AGG + chr1.3:1385602-1385621 MS.gene64198:intron 35.0%
!!! CGAGTAATGGATTTTGAGTT+TGG - chr1.3:1388242-1388261 None:intergenic 35.0%
!!! GTATTATTGGTTTTGGCGAT+AGG - chr1.3:1388099-1388118 None:intergenic 35.0%
AACAACTGAGATGGAAGACT+AGG - chr1.3:1385473-1385492 None:intergenic 40.0%
AAGTGGCGAAATATTCAGGT+AGG + chr1.3:1387381-1387400 MS.gene64198:intron 40.0%
ACAACTGAGATGGAAGACTA+GGG - chr1.3:1385472-1385491 None:intergenic 40.0%
ACATTTCGACATATCTACCG+AGG + chr1.3:1386080-1386099 MS.gene64198:CDS 40.0%
ACCATACAATTAGTCGCGAA+TGG - chr1.3:1387440-1387459 None:intergenic 40.0%
ACCATTCGCGACTAATTGTA+TGG + chr1.3:1387436-1387455 MS.gene64198:intron 40.0%
ACTTGACACAACAACTGAGA+TGG - chr1.3:1385482-1385501 None:intergenic 40.0%
AGCTTACAGAATTCAGTGGT+TGG - chr1.3:1385659-1385678 None:intergenic 40.0%
AGTAGAAGGATCAACCATAG+TGG - chr1.3:1388568-1388587 None:intergenic 40.0%
ATATTTCGCCACTTAGAACC+AGG - chr1.3:1387375-1387394 None:intergenic 40.0%
CAAACATGCATTCAATTGCG+CGG - chr1.3:1389030-1389049 None:intergenic 40.0%
CACACTTCTTGGTTCATTGA+AGG - chr1.3:1388444-1388463 None:intergenic 40.0%
CTGAATGACACAAAAGGTTC+CGG + chr1.3:1389064-1389083 MS.gene64198:CDS 40.0%
CTTCAATGAACCAAGAAGTG+TGG + chr1.3:1388442-1388461 MS.gene64198:CDS 40.0%
CTTGTCTATTACTTCCCTCA+AGG + chr1.3:1385207-1385226 MS.gene64198:CDS 40.0%
GAACTAGTATGAGCGAGTAA+TGG - chr1.3:1388255-1388274 None:intergenic 40.0%
GATCTTGTGTAGGGAATTTG+TGG + chr1.3:1389282-1389301 MS.gene64198:intron 40.0%
GGAAAGATGAAAAGGCTTTC+TGG - chr1.3:1387620-1387639 None:intergenic 40.0%
GGGAAGTCAAACATATGATC+AGG - chr1.3:1388144-1388163 None:intergenic 40.0%
GGTGTGGTGATAAGCAAAAT+CGG + chr1.3:1387570-1387589 MS.gene64198:CDS 40.0%
GTAGAAGCTGCAACCTTAAA+AGG - chr1.3:1385416-1385435 None:intergenic 40.0%
GTGGACTTCATATCTTGCAA+GGG - chr1.3:1387967-1387986 None:intergenic 40.0%
GTGTGGTGATAAGCAAAATC+GGG + chr1.3:1387571-1387590 MS.gene64198:CDS 40.0%
GTGTTTCCAGTATCTGAGTT+TGG + chr1.3:1385788-1385807 MS.gene64198:CDS 40.0%
TCAGTGATGTCGATCCTTTA+AGG + chr1.3:1387346-1387365 MS.gene64198:CDS 40.0%
TCTTGTGTAGGGAATTTGTG+GGG + chr1.3:1389284-1389303 MS.gene64198:intron 40.0%
TGAGCAAAAGTCGTCGAAAA+TGG - chr1.3:1388598-1388617 None:intergenic 40.0%
TGCAGAAAATATCCTCACCT+CGG - chr1.3:1386100-1386119 None:intergenic 40.0%
TGGAGCATGTCAATCATTTG+AGG - chr1.3:1388321-1388340 None:intergenic 40.0%
TGGATTCTCTATAACCTGTG+TGG - chr1.3:1387986-1388005 None:intergenic 40.0%
TGTAAGGATCTAACACGATC+AGG - chr1.3:1386438-1386457 None:intergenic 40.0%
TGTGGACTTCATATCTTGCA+AGG - chr1.3:1387968-1387987 None:intergenic 40.0%
! CGAACAACTAGTTCTTGAGT+TGG - chr1.3:1386038-1386057 None:intergenic 40.0%
! CTATATAGCCTTACCAATGG+AGG - chr1.3:1385926-1385945 None:intergenic 40.0%
! CTCCACTGTTCCTTCATTTT+CGG - chr1.3:1387818-1387837 None:intergenic 40.0%
! GATTTTCTGTATTTGGCCAG+TGG - chr1.3:1387133-1387152 None:intergenic 40.0%
! GTGCTATATAGCCTTACCAA+TGG - chr1.3:1385929-1385948 None:intergenic 40.0%
! GTGCTTGAAAGGTGAACTTT+TGG - chr1.3:1388006-1388025 None:intergenic 40.0%
! TAGCAGAAGTAATCTGAGAC+TGG - chr1.3:1388689-1388708 None:intergenic 40.0%
! TCCACTGTTCCTTCATTTTC+GGG - chr1.3:1387817-1387836 None:intergenic 40.0%
! TCTTGCAAGGGAACTCTTTT+AGG - chr1.3:1387955-1387974 None:intergenic 40.0%
!! AAAAGTGTTGGAGGAGTTGT+TGG + chr1.3:1384923-1384942 MS.gene64198:CDS 40.0%
!! ACAACTAGTTCTTGAGTTGG+GGG - chr1.3:1386035-1386054 None:intergenic 40.0%
!! AGCAAAATCGGGTTAGTGTT+TGG + chr1.3:1387582-1387601 MS.gene64198:CDS 40.0%
!! GAAAAGGCTAAAAGTGTTGG+AGG + chr1.3:1384914-1384933 MS.gene64198:CDS 40.0%
!! GCAAAATCGGGTTAGTGTTT+GGG + chr1.3:1387583-1387602 MS.gene64198:CDS 40.0%
!! GTTTGTTTGTCGGCTCAAAA+AGG + chr1.3:1386519-1386538 MS.gene64198:CDS 40.0%
!! TCAGCAGAAAGTACTGATGA+TGG - chr1.3:1386913-1386932 None:intergenic 40.0%
!! TGGTTCATTGAAGGTATCGA+GGG - chr1.3:1388435-1388454 None:intergenic 40.0%
!! TTGGTTCATTGAAGGTATCG+AGG - chr1.3:1388436-1388455 None:intergenic 40.0%
AAGAGACACCTTCTCACAAC+GGG + chr1.3:1386491-1386510 MS.gene64198:CDS 45.0%
ACCAATCCGAACCTACACAA+AGG + chr1.3:1388830-1388849 MS.gene64198:CDS 45.0%
ACCCGAAAATGAAGGAACAG+TGG + chr1.3:1387813-1387832 MS.gene64198:CDS 45.0%
ACCTGTTCACTATGTCCTTG+AGG - chr1.3:1385225-1385244 None:intergenic 45.0%
ACCTTTGTGTAGGTTCGGAT+TGG - chr1.3:1388834-1388853 None:intergenic 45.0%
ACTTGAGGCAATGACACAAG+AGG - chr1.3:1385180-1385199 None:intergenic 45.0%
AGAGTTGTCTCGCAGAGAAA+AGG - chr1.3:1388730-1388749 None:intergenic 45.0%
AGTGATACTAGCACACATGG+TGG + chr1.3:1385863-1385882 MS.gene64198:CDS 45.0%
ATCGAGGGATTCACTACTTG+AGG - chr1.3:1388420-1388439 None:intergenic 45.0%
ATGACACAAAAGGTTCCGGA+TGG + chr1.3:1389068-1389087 MS.gene64198:CDS 45.0%
CAAATCTCATGCCAGCTGAA+AGG - chr1.3:1387171-1387190 None:intergenic 45.0%
CATTCGTCTACGTCTATCTG+CGG - chr1.3:1388375-1388394 None:intergenic 45.0%
CCACAGGTGATCAACAACAA+TGG + chr1.3:1387895-1387914 MS.gene64198:CDS 45.0%
CCCAAATATCCGGATTGCAA+CGG - chr1.3:1387668-1387687 None:intergenic 45.0%
CCGTTGCAATCCGGATATTT+GGG + chr1.3:1387665-1387684 MS.gene64198:CDS 45.0%
CCTGTTCACTATGTCCTTGA+GGG - chr1.3:1385224-1385243 None:intergenic 45.0%
CGCGCAATTGAATGCATGTT+TGG + chr1.3:1389028-1389047 MS.gene64198:CDS 45.0%
CTTGAGGCAATGACACAAGA+GGG - chr1.3:1385179-1385198 None:intergenic 45.0%
CTTTCAGCTGGCATGAGATT+TGG + chr1.3:1387169-1387188 MS.gene64198:CDS 45.0%
GAAGAGACACCTTCTCACAA+CGG + chr1.3:1386490-1386509 MS.gene64198:CDS 45.0%
GAATTATGGCATGCTTGTGC+TGG + chr1.3:1385153-1385172 MS.gene64198:CDS 45.0%
GAGAGTGATGTTCTGCTAGT+TGG + chr1.3:1389112-1389131 MS.gene64198:CDS 45.0%
GATGGAAGACTAGGGTAGTT+TGG - chr1.3:1385464-1385483 None:intergenic 45.0%
GCAAGATATGAAGTCCACAC+AGG + chr1.3:1387969-1387988 MS.gene64198:CDS 45.0%
GCTAGTGATACTAGCACACA+TGG + chr1.3:1385860-1385879 MS.gene64198:CDS 45.0%
GCTAGTTGGAGATGATCCTT+GGG + chr1.3:1389126-1389145 MS.gene64198:CDS 45.0%
GGCTCAAAAAGGCTTAAAGC+AGG + chr1.3:1386530-1386549 MS.gene64198:CDS 45.0%
GGTCTGCTGAATGACACAAA+AGG + chr1.3:1389058-1389077 MS.gene64198:CDS 45.0%
GTATGCTCTCTGTGCTTGAA+AGG - chr1.3:1388017-1388036 None:intergenic 45.0%
GTCTGACGCATATCATACAC+CGG - chr1.3:1386166-1386185 None:intergenic 45.0%
GTCTTGTACTTGCTCACTAG+TGG + chr1.3:1387725-1387744 MS.gene64198:intron 45.0%
GTGCAAAAAGCAGGTTCTGT+AGG + chr1.3:1388959-1388978 MS.gene64198:CDS 45.0%
TCTGCTGATAGCATGCACAT+TGG + chr1.3:1386925-1386944 MS.gene64198:CDS 45.0%
TGCCAACCATGCAATCTTGA+GGG - chr1.3:1388644-1388663 None:intergenic 45.0%
TGCTAGTTGGAGATGATCCT+TGG + chr1.3:1389125-1389144 MS.gene64198:CDS 45.0%
TTAGAACCAGGCCACCTTAA+AGG - chr1.3:1387363-1387382 None:intergenic 45.0%
TTGCCAACCATGCAATCTTG+AGG - chr1.3:1388645-1388664 None:intergenic 45.0%
! AGCTGTTTCCTCCATTGGTA+AGG + chr1.3:1385915-1385934 MS.gene64198:intron 45.0%
! AGGGTAGTTTGGAATCTGTG+AGG - chr1.3:1385453-1385472 None:intergenic 45.0%
! ATGTTTGAGACCGAGGAATC+GGG + chr1.3:1387196-1387215 MS.gene64198:CDS 45.0%
! CCATTGTTGTTGATCACCTG+TGG - chr1.3:1387898-1387917 None:intergenic 45.0%
! CTTGTGTCATTGCCTCAAGT+GGG + chr1.3:1385180-1385199 MS.gene64198:CDS 45.0%
! GAATGCATGTTTGGACTGGA+CGG + chr1.3:1389037-1389056 MS.gene64198:CDS 45.0%
! GATGTTTGAGACCGAGGAAT+CGG + chr1.3:1387195-1387214 MS.gene64198:CDS 45.0%
! GGAAAAGCTGTTTCCTCCAT+TGG + chr1.3:1385910-1385929 MS.gene64198:CDS 45.0%
! GTGATGTCGATCCTTTAAGG+TGG + chr1.3:1387349-1387368 MS.gene64198:CDS 45.0%
! TAGCACACATGGTGGCTTTT+CGG + chr1.3:1385871-1385890 MS.gene64198:CDS 45.0%
! TCTTGTGTCATTGCCTCAAG+TGG + chr1.3:1385179-1385198 MS.gene64198:CDS 45.0%
! TGGTATGATGTTTGAGACCG+AGG + chr1.3:1387189-1387208 MS.gene64198:CDS 45.0%
! TTGGTTGCGTCCCTCTTTTA+TGG + chr1.3:1385952-1385971 MS.gene64198:intron 45.0%
! TTGTGTCATTGCCTCAAGTG+GGG + chr1.3:1385181-1385200 MS.gene64198:CDS 45.0%
! TTTTCTCTGCGAGACAACTC+TGG + chr1.3:1388729-1388748 MS.gene64198:CDS 45.0%
! TTTTGCTTATCACCACACCC+TGG - chr1.3:1387569-1387588 None:intergenic 45.0%
!! ACGGGTTGGAGTTTGTTTGT+CGG + chr1.3:1386509-1386528 MS.gene64198:CDS 45.0%
!! GTTGTGAGAAGGTGTCTCTT+CGG - chr1.3:1386491-1386510 None:intergenic 45.0%
!!! ATCGGTGTCGGTTTTATGTG+TGG + chr1.3:1386231-1386250 MS.gene64198:intron 45.0%
AACTCCAACCCGTTGTGAGA+AGG - chr1.3:1386502-1386521 None:intergenic 50.0%
CACCCTCAAGATTGCATGGT+TGG + chr1.3:1388639-1388658 MS.gene64198:CDS 50.0%
CCCTCAAGGACATAGTGAAC+AGG + chr1.3:1385221-1385240 MS.gene64198:CDS 50.0%
CGCAGATAGACGTAGACGAA+TGG + chr1.3:1388373-1388392 MS.gene64198:CDS 50.0%
CTAAAACGGCCGTTGCAATC+CGG + chr1.3:1387656-1387675 MS.gene64198:CDS 50.0%
GAGAAGTCGCAATTGCGAGT+TGG + chr1.3:1386853-1386872 MS.gene64198:CDS 50.0%
GCCGTTGCAATCCGGATATT+TGG + chr1.3:1387664-1387683 MS.gene64198:CDS 50.0%
GGGATGAAGCTTCTGAACAG+CGG + chr1.3:1389364-1389383 MS.gene64198:CDS 50.0%
GGGTGAGAAACTTACTCCCA+AGG - chr1.3:1389145-1389164 None:intergenic 50.0%
GTGTGACAGGTGCAAAAAGC+AGG + chr1.3:1388950-1388969 MS.gene64198:intron 50.0%
TATGGGACTCACCTTTCAGC+TGG + chr1.3:1387157-1387176 MS.gene64198:CDS 50.0%
TCAGCACCCTCAAGATTGCA+TGG + chr1.3:1388635-1388654 MS.gene64198:CDS 50.0%
TCGACATATCTACCGAGGTG+AGG + chr1.3:1386085-1386104 MS.gene64198:intron 50.0%
TCGATTAGCAGCTGCATGAG+CGG - chr1.3:1386965-1386984 None:intergenic 50.0%
TCTAACTGAGGCTGCTGCAT+TGG - chr1.3:1388282-1388301 None:intergenic 50.0%
! AGTGTTGGAGGAGTTGTTGG+TGG + chr1.3:1384926-1384945 MS.gene64198:CDS 50.0%
! GCGATAGGCAGCAACTTTTC+CGG - chr1.3:1388084-1388103 None:intergenic 50.0%
! TGTGTCATTGCCTCAAGTGG+GGG + chr1.3:1385182-1385201 MS.gene64198:CDS 50.0%
!! CGCAATTGCGAGTTGGTGTA+AGG + chr1.3:1386860-1386879 MS.gene64198:CDS 50.0%
!! TAAGGTGGCCTGGTTCTAAG+TGG + chr1.3:1387364-1387383 MS.gene64198:CDS 50.0%
AGGCTGAATGGGATGAGCCA+GGG + chr1.3:1387549-1387568 MS.gene64198:intron 55.0%
GACACCTTCTCACAACGGGT+TGG + chr1.3:1386495-1386514 MS.gene64198:CDS 55.0%
GTGTCTGTGGTCTGTGTGAC+AGG + chr1.3:1388937-1388956 MS.gene64198:intron 55.0%
TAGACAAGACCCCCCACTTG+AGG - chr1.3:1385195-1385214 None:intergenic 55.0%
TCTCTGCGAGACAACTCTGG+TGG + chr1.3:1388732-1388751 MS.gene64198:CDS 55.0%
! GTGTCATTGCCTCAAGTGGG+GGG + chr1.3:1385183-1385202 MS.gene64198:CDS 55.0%
!! CGGATTGCAACGGCCGTTTT+AGG - chr1.3:1387658-1387677 None:intergenic 55.0%
!! CTGAACAGCGGAGCATTGCA+AGG + chr1.3:1389376-1389395 MS.gene64198:CDS 55.0%
!! GTCGATCCTTTAAGGTGGCC+TGG + chr1.3:1387354-1387373 MS.gene64198:CDS 55.0%
CAGGCTGAATGGGATGAGCC+AGG + chr1.3:1387548-1387567 MS.gene64198:intron 60.0%
CCTGCGCTTACCCGATTCCT+CGG - chr1.3:1387209-1387228 None:intergenic 60.0%
GAATGGGATGAGCCAGGGTG+TGG + chr1.3:1387554-1387573 MS.gene64198:CDS 60.0%
TTCGGTTCCACGCAGAGCTG+CGG + chr1.3:1385889-1385908 MS.gene64198:CDS 60.0%
! AGCTTTTCCGCAGCTCTGCG+TGG - chr1.3:1385899-1385918 None:intergenic 60.0%
CCGAGGAATCGGGTAAGCGC+AGG + chr1.3:1387206-1387225 MS.gene64198:CDS 65.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 1384899 1389411 1384899 ID=MS.gene64198
chr1.3 mRNA 1384899 1389411 1384899 ID=MS.gene64198.t1;Parent=MS.gene64198
chr1.3 exon 1384899 1385001 1384899 ID=MS.gene64198.t1.exon1;Parent=MS.gene64198.t1
chr1.3 CDS 1384899 1385001 1384899 ID=cds.MS.gene64198.t1;Parent=MS.gene64198.t1
chr1.3 exon 1385130 1385242 1385130 ID=MS.gene64198.t1.exon2;Parent=MS.gene64198.t1
chr1.3 CDS 1385130 1385242 1385130 ID=cds.MS.gene64198.t1;Parent=MS.gene64198.t1
chr1.3 exon 1385422 1385520 1385422 ID=MS.gene64198.t1.exon3;Parent=MS.gene64198.t1
chr1.3 CDS 1385422 1385520 1385422 ID=cds.MS.gene64198.t1;Parent=MS.gene64198.t1
chr1.3 exon 1385615 1385671 1385615 ID=MS.gene64198.t1.exon4;Parent=MS.gene64198.t1
chr1.3 CDS 1385615 1385671 1385615 ID=cds.MS.gene64198.t1;Parent=MS.gene64198.t1
chr1.3 exon 1385779 1385931 1385779 ID=MS.gene64198.t1.exon5;Parent=MS.gene64198.t1
chr1.3 CDS 1385779 1385931 1385779 ID=cds.MS.gene64198.t1;Parent=MS.gene64198.t1
chr1.3 exon 1386017 1386101 1386017 ID=MS.gene64198.t1.exon6;Parent=MS.gene64198.t1
chr1.3 CDS 1386017 1386101 1386017 ID=cds.MS.gene64198.t1;Parent=MS.gene64198.t1
chr1.3 exon 1386483 1386573 1386483 ID=MS.gene64198.t1.exon7;Parent=MS.gene64198.t1
chr1.3 CDS 1386483 1386573 1386483 ID=cds.MS.gene64198.t1;Parent=MS.gene64198.t1
chr1.3 exon 1386849 1387013 1386849 ID=MS.gene64198.t1.exon8;Parent=MS.gene64198.t1
chr1.3 CDS 1386849 1387013 1386849 ID=cds.MS.gene64198.t1;Parent=MS.gene64198.t1
chr1.3 exon 1387105 1387227 1387105 ID=MS.gene64198.t1.exon9;Parent=MS.gene64198.t1
chr1.3 CDS 1387105 1387227 1387105 ID=cds.MS.gene64198.t1;Parent=MS.gene64198.t1
chr1.3 exon 1387323 1387398 1387323 ID=MS.gene64198.t1.exon10;Parent=MS.gene64198.t1
chr1.3 CDS 1387323 1387398 1387323 ID=cds.MS.gene64198.t1;Parent=MS.gene64198.t1
chr1.3 exon 1387551 1387686 1387551 ID=MS.gene64198.t1.exon11;Parent=MS.gene64198.t1
chr1.3 CDS 1387551 1387686 1387551 ID=cds.MS.gene64198.t1;Parent=MS.gene64198.t1
chr1.3 exon 1387770 1388851 1387770 ID=MS.gene64198.t1.exon12;Parent=MS.gene64198.t1
chr1.3 CDS 1387770 1388851 1387770 ID=cds.MS.gene64198.t1;Parent=MS.gene64198.t1
chr1.3 exon 1388959 1389149 1388959 ID=MS.gene64198.t1.exon13;Parent=MS.gene64198.t1
chr1.3 CDS 1388959 1389149 1388959 ID=cds.MS.gene64198.t1;Parent=MS.gene64198.t1
chr1.3 exon 1389294 1389411 1389294 ID=MS.gene64198.t1.exon14;Parent=MS.gene64198.t1
chr1.3 CDS 1389294 1389411 1389294 ID=cds.MS.gene64198.t1;Parent=MS.gene64198.t1
Gene Sequence

>MS.gene64198

ATGGCTTCCTTAGAAGAAAAGGCTAAAAGTGTTGGAGGAGTTGTTGGTGGTCAAACTCTTGTTGCTGAAATGAAGTTGCTCAAAGAAATGCAAGAACATTGTGGTAAGTTCATGTTTCCTTCTCTTTTTTCTTAATTTTTACAATGGTTATGTTTTATGGTTTCATAGTTTTCTTAGTAGAAATTGAGATTTTGATTTGATTGATATTTGGTTGTACTAATTTTTGTTTAGGGGTTAGAAAGACATTAAATTCAGAATTATGGCATGCTTGTGCTGGCCCTCTTGTGTCATTGCCTCAAGTGGGGGGTCTTGTCTATTACTTCCCTCAAGGACATAGTGAACAGGTAACATTCAAACTCAAGAATCTCTTTTTTATGTTTTAACATTTTTAAGTGCTAATTCATTCACTGCTTATGTTAGTATTGTAGTTTTAAGTTTCTTTGGTTAGAATTAGCAAGATTCTAGTTTCTATTGAATGGTTGAAACATGTGTTGAATTTTTGTTTGTGTTTTGTCCTTTTAAGGTTGCAGCTTCTACTAGAAGAATAGCTACCTCACAGATTCCAAACTACCCTAGTCTTCCATCTCAGTTGTTGTGTCAAGTACAAAATGTCACACTACATGTGAGTAGTGTTCTCTCTTGATTTACCACTTTTTGCTGTTGCATTTCAACTTCAAATTATCATAACCCCTTTAAATTGTATGTTTTGATAATAGGCTGACAAGGAGACAGATGAAATCTATGCTCAAATGACTCTCCAACCACTGAATTCTGTAAGCTATATGAAGTAGTTAGTTCTAGAATTATTGTTGTTGTTATTGTACATCTAAATGTTATTGGTTATGATTATTTTTGATGTATTATTTTTCATTTGTGTTAGGAAAAAGAAGTGTTTCCAGTATCTGAGTTTGGACTAAACAAAAGTAAACATCCAACTGAGTTTTTCTGCAAAACTTTGACGGCTAGTGATACTAGCACACATGGTGGCTTTTCGGTTCCACGCAGAGCTGCGGAAAAGCTGTTTCCTCCATTGGTAAGGCTATATAGCACTAGTTGGTTGCGTCCCTCTTTTATGGCTGTACAAGAACCCTCATTTGATTAGTGTGTTTTGGTTTTAGGATTACACAATTCAACCCCCAACTCAAGAACTAGTTGTTCGAGATTTGCATGATAATACATGGACATTTCGACATATCTACCGAGGTGAGGATATTTTCTGCATCTATGTAGCACCTAGCACCTACACTTTAGATTAATGGTGTGTCCGGTGTATGATATGCGTCAGACCTGATCTCAAACACACATAGTTACATTCAATTTTTTCAGATTATTATCGGTGTCGGTTTTATGTGTGGTGTTCGCATCTGTGTTAGTGCTTTATAGTTCAATCTATGTCCATTGGTTTGGTAAAATAAACAGGAATAAATGTTTGTGCTTGTGGATTATATATTGCATTATTTTAACTGCAACTTTATTATTGTTTGGGTTTCAATGTTTTCTTTATCTTAACCTTCAAAATAATTAGTCTTGGAAAAGCCTGATCGTGTTAGATCCTTACATTTTTTCCCTAAATTTTTCATGTAGGTCAGCCGAAGAGACACCTTCTCACAACGGGTTGGAGTTTGTTTGTCGGCTCAAAAAGGCTTAAAGCAGGCGATTCTGTTCTTTTTATCAGGTAAAATTTGTTTGCTTCATTTTTTGTCAAGTAGCCAAACATGATACGAAACTCTGTTATTATCTGAATATAGGTAGAATAACTAGTGTGCAGAACAAAGTCTGCATACTTTTTTTAATTATACTTGTTTTTTCTCCATAGTTACATTGCAATGTAATGGTTTTCAATATTAGGAAAATTGTGGAATCCTGATTAGCAACTTGTTATTTTAAATTCCAACCAATAATCATCTCTACATAAATTAATACTAAATGTGATGTGTTAATTGTTACAAGGGATGAGAAGTCGCAATTGCGAGTTGGTGTAAGGCGTGCTAATCGTCAACAGACAACACTGCCATCATCAGTACTTTCTGCTGATAGCATGCACATTGGTGTGCTTGCTGCTGCCGCTCATGCAGCTGCTAATCGAAGTCCATTCACGATTTTCTACAATCCAAGGTATACCTAAATATGTTTATACCTCACCTGACATATAATATTTTTAGATCTAATCGTGGTACTAATTTCTTCTTGAGCGTATTATTTGCAGGGCATGTCCTTCGAATTTTGTTATTCCACTGGCCAAATACAGAAAATCTGTTTATGGGACTCACCTTTCAGCTGGCATGAGATTTGGTATGATGTTTGAGACCGAGGAATCGGGTAAGCGCAGGTAATTTCCTGAATTCTTCTGAACTGTTTTCTGTGATATGTGCAAACTCCTGAACTAACTATAATAGTTGATATATATTTCTTCTTATTCTGCAGATATATGGGTACAATTGTAGGTATCAGTGATGTCGATCCTTTAAGGTGGCCTGGTTCTAAGTGGCGAAATATTCAGGTAGGTTAAGTTCTAGTAACCCCAGTTATTAAGATATACCATTCGCGACTAATTGTATGGTTTCATCTAATATTTCTATAAAACATACTCTATGTTGGACCTTAATCTTAGTAATATAGTCGGCTTAAATAAATTTCTTTGTAAATAAACAGGCTGAATGGGATGAGCCAGGGTGTGGTGATAAGCAAAATCGGGTTAGTGTTTGGGAGATTGAGACTCCAGAAAGCCTTTTCATCTTTCCTTCTTTGACTTCAAGCCTAAAACGGCCGTTGCAATCCGGATATTTGGGTACGTTTCTTTATTCTCTATTCCCACCTTATCAAAATGTCTTGTACTTGCTCACTAGTGGTTATTTTGGTTCTATGATGCAGAAAATGAGTGGGGAACTTTGATACGAAGACCCTTTATTAAAGTACCCGAAAATGAAGGAACAGTGGAGCTCTCAAACTCAATGCCAAATCTCTACCAAGAAAACATGATGAAGATGTTTTATAAACCACAGGTGATCAACAACAATGGAGCCTTTTTACCTATCATGCAACAAGATTATGCTCCTAAAAGAGTTCCCTTGCAAGATATGAAGTCCACACAGGTTATAGAGAATCCAAAAGTTCACCTTTCAAGCACAGAGAGCATACCTAATAACACCTTTAACATGCATTCATTGTTGAAAAGTGAGCAACCGGAAAAGTTGCTGCCTATCGCCAAAACCAATAATACAAAATTAGAATCTGAGGTGTTACCTGATCATATGTTTGACTTCCCATCTTTTGAAAGCTGCAACAACATCGAAAAAGTGAATAGGGCAAACCAACTAACATATTATAATCAAAACCAAAACCAAACTCAAAATCCATTACTCGCTCATACTAGTTCATCGCCAATGCAGCAGCCTCAGTTAGAATCATCAATGTCACATCCTCAAATGATTGACATGCTCCAACCCGATTCTTCTATTGTAAACAGCATGATTCCGCAGATAGACGTAGACGAATGGATGATGTATTCTTCTTGTCAGCCTCAAGTAGTGAATCCCTCGATACCTTCAATGAACCAAGAAGTGTGGGATAATTATGTCAAGAATTTTAACTTGAGGGATCTTTCAGCTGAAAGCAATAACCAAAGTGAAATTTGTGTCAATGTTGATGCTATTAATAGTGTCAGTACCACTATGGTTGATCCTTCTACTTCAAACACCATTTTCGACGACTTTTGCTCAATGAAAGATAAAGATTTTCAGCACCCTCAAGATTGCATGGTTGGCAACTTAAGTTCTAGTCAAGATGGCCAGTCTCAGATTACTTCTGCTAGTCTAGCTGAGTCGCACGCCTTTTCTCTGCGAGACAACTCTGGTGGTACTTCTTCAAGCCATGTTGATTTTGATGAAAGTAGTTTTCTGCAGAATAATAACTCTTGGAAGCAAGTAGCTGCACCAATCCGAACCTACACAAAGGTAACATTATTTCTGTAATGTTGGCATGAATGTTACTTGTTTTTTCCAATTTGTTTCGATCTTGTATATCATGATGGTATTTATTGTGTCTGTGGTCTGTGTGACAGGTGCAAAAAGCAGGTTCTGTAGGAAGATCAATTGATGTGACTACTTTCAAGAACTATGAAGAGTTGATCCGCGCAATTGAATGCATGTTTGGACTGGACGGTCTGCTGAATGACACAAAAGGTTCCGGATGGAAACTAGTATACGTAGATTATGAGAGTGATGTTCTGCTAGTTGGAGATGATCCTTGGGAGTAAGTTTCTCACCCTTCTTTCGTGTAATGTTTGATCTTTGACACTTAAGTTTAATAGTCTTATTTTGGTTACATTTTTTCAGACAAAAAAAAGACCCTTTTTAGATATTAAAACTTTTGGAACAATGTTGTGATCTTGTGTAGGGAATTTGTGGGGTGTGTCCGCTGTATACGAATATTATCACCTTCAGAAGTTAAAGAGATGAGTGAAGAAGGGATGAAGCTTCTGAACAGCGGAGCATTGCAAGGAATCAATGTGTGA
Protein sequence

>MS.gene64198.t1

MASLEEKAKSVGGVVGGQTLVAEMKLLKEMQEHCGVRKTLNSELWHACAGPLVSLPQVGGLVYYFPQGHSEQVAASTRRIATSQIPNYPSLPSQLLCQVQNVTLHADKETDEIYAQMTLQPLNSEKEVFPVSEFGLNKSKHPTEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLKAGDSVLFIRDEKSQLRVGVRRANRQQTTLPSSVLSADSMHIGVLAAAAHAAANRSPFTIFYNPRACPSNFVIPLAKYRKSVYGTHLSAGMRFGMMFETEESGKRRYMGTIVGISDVDPLRWPGSKWRNIQAEWDEPGCGDKQNRVSVWEIETPESLFIFPSLTSSLKRPLQSGYLENEWGTLIRRPFIKVPENEGTVELSNSMPNLYQENMMKMFYKPQVINNNGAFLPIMQQDYAPKRVPLQDMKSTQVIENPKVHLSSTESIPNNTFNMHSLLKSEQPEKLLPIAKTNNTKLESEVLPDHMFDFPSFESCNNIEKVNRANQLTYYNQNQNQTQNPLLAHTSSSPMQQPQLESSMSHPQMIDMLQPDSSIVNSMIPQIDVDEWMMYSSCQPQVVNPSIPSMNQEVWDNYVKNFNLRDLSAESNNQSEICVNVDAINSVSTTMVDPSTSNTIFDDFCSMKDKDFQHPQDCMVGNLSSSQDGQSQITSASLAESHAFSLRDNSGGTSSSHVDFDESSFLQNNNSWKQVAAPIRTYTKVQKAGSVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPSEVKEMSEEGMKLLNSGALQGINV