Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024074.t1 | XP_003624232.1 | 100 | 139 | 0 | 0 | 1 | 139 | 1 | 139 | 9.40E-70 | 272.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024074.t1 | O04173 | 78.4 | 139 | 25 | 2 | 1 | 139 | 1 | 134 | 6.2e-54 | 211.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024074.t1 | G7KSG1 | 100.0 | 139 | 0 | 0 | 1 | 139 | 1 | 139 | 6.8e-70 | 272.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene024074 | MS.gene005535 | PPI |
| MS.gene024074 | MS.gene20838 | PPI |
| MS.gene024074 | MS.gene07265 | PPI |
| MS.gene024074 | MS.gene20787 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024074.t1 | MTR_7g080740 | 100.000 | 139 | 0 | 0 | 1 | 139 | 1 | 139 | 7.95e-102 | 287 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024074.t1 | AT4G31720 | 77.698 | 139 | 26 | 2 | 1 | 139 | 1 | 134 | 8.79e-70 | 206 |
| MS.gene024074.t1 | AT4G31720 | 77.698 | 139 | 26 | 2 | 1 | 139 | 1 | 134 | 8.79e-70 | 206 |
| MS.gene024074.t1 | AT4G31720 | 77.698 | 139 | 26 | 2 | 1 | 139 | 1 | 134 | 8.79e-70 | 206 |
Find 31 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTTGATTGCGGCTGATTC+TGG | 0.178719 | 7.1:-23852981 | None:intergenic |
| GGCTATCAGCAAAATATTCT+TGG | 0.384824 | 7.1:-23855841 | None:intergenic |
| CAACAATTCCAAAAGACAAA+AGG | 0.421748 | 7.1:+23854499 | MS.gene024074:CDS |
| TGAGTTGGTGGAGCATTACT+TGG | 0.429009 | 7.1:+23853176 | MS.gene024074:CDS |
| AACTAAGGAAGCTAGGAAAT+CGG | 0.431723 | 7.1:-23853040 | None:intergenic |
| TAATGCTCCACCAACTCATC+TGG | 0.444698 | 7.1:-23853171 | None:intergenic |
| ACTCATTCATCTCGAGTGGC+AGG | 0.476627 | 7.1:-23855881 | None:intergenic |
| CCAATGTTTCAGGACTAGAT+TGG | 0.484365 | 7.1:+23853970 | MS.gene024074:intron |
| AACAATTCCAAAAGACAAAA+GGG | 0.488464 | 7.1:+23854500 | MS.gene024074:CDS |
| TATAATCAACTAAGGAAGCT+AGG | 0.499784 | 7.1:-23853047 | None:intergenic |
| GGTACTCACAATCTCACATC+AGG | 0.516265 | 7.1:-23853219 | None:intergenic |
| AAATTTGTTGCAGAAGTCGC+AGG | 0.516680 | 7.1:+23854010 | MS.gene024074:CDS |
| CCTTCGCTTGAACTTGATTG+CGG | 0.520298 | 7.1:-23852991 | None:intergenic |
| AGGACATTGAAAGCCACTCT+TGG | 0.525406 | 7.1:-23853199 | None:intergenic |
| TTAGATACCAGATGAGTTGG+TGG | 0.530968 | 7.1:+23853164 | MS.gene024074:intron |
| AGTAGGAGTATAATCAACTA+AGG | 0.533067 | 7.1:-23853055 | None:intergenic |
| TTTGCTGATAGCCCTTCGAC+TGG | 0.533587 | 7.1:+23855851 | MS.gene024074:CDS |
| GCAGGGTCCATTCCAGTCGA+AGG | 0.541033 | 7.1:-23855863 | None:intergenic |
| AATCAAGTTCAAGCGAAGGA+AGG | 0.545925 | 7.1:+23852995 | MS.gene024074:CDS |
| ATCAAGTTCAAGCGAAGGAA+GGG | 0.562141 | 7.1:+23852996 | MS.gene024074:CDS |
| GAGCATTACTTGGCCAAGAG+TGG | 0.569842 | 7.1:+23853186 | MS.gene024074:CDS |
| TGATAGCCCTTCGACTGGAA+TGG | 0.574040 | 7.1:+23855856 | MS.gene024074:CDS |
| CAAAAGGGACAGACAACAGA+AGG | 0.590753 | 7.1:+23854515 | MS.gene024074:CDS |
| CTCATTCATCTCGAGTGGCA+GGG | 0.595561 | 7.1:-23855880 | None:intergenic |
| ACTGTAGGCACTGCAAAGCA+AGG | 0.611903 | 7.1:+23854472 | MS.gene024074:intron |
| CCGCAATCAAGTTCAAGCGA+AGG | 0.622408 | 7.1:+23852991 | MS.gene024074:CDS |
| GATCTTCCATCGTCAAAACA+AGG | 0.626516 | 7.1:-23854627 | None:intergenic |
| CAGGGTCCATTCCAGTCGAA+GGG | 0.633990 | 7.1:-23855862 | None:intergenic |
| ATGTACTCATTCATCTCGAG+TGG | 0.634069 | 7.1:-23855885 | None:intergenic |
| TTCTGCAACAAATTTCTGAG+TGG | 0.649282 | 7.1:-23854002 | None:intergenic |
| TCTATCGAAAGCACTGCGTG+AGG | 0.667982 | 7.1:+23854648 | MS.gene024074:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAATAAAACAAAAAAAGA+AGG | - | chr7.1:23854086-23854105 | None:intergenic | 10.0% |
| !! | AAATGAATTCGATTAAATTT+GGG | - | chr7.1:23854291-23854310 | None:intergenic | 15.0% |
| !! | TTAAAAAAAGAAGAAAACAA+AGG | - | chr7.1:23853752-23853771 | None:intergenic | 15.0% |
| !!! | AAAATATTTAATTTCATGTG+AGG | + | chr7.1:23853313-23853332 | MS.gene024074:intron | 15.0% |
| !!! | ATTATCAATTATTGATAACA+AGG | - | chr7.1:23854714-23854733 | None:intergenic | 15.0% |
| !!! | TTAAATATTTTCTCAAACTA+TGG | - | chr7.1:23853304-23853323 | None:intergenic | 15.0% |
| !! | ATATATAGGATTCCAAATAA+AGG | - | chr7.1:23853617-23853636 | None:intergenic | 20.0% |
| !! | CAAATGAATTCGATTAAATT+TGG | - | chr7.1:23854292-23854311 | None:intergenic | 20.0% |
| !! | CAAATTTAATCGAATTCATT+TGG | + | chr7.1:23854290-23854309 | MS.gene024074:intron | 20.0% |
| !! | CATGTATATATATTAATTCC+CGG | + | chr7.1:23854769-23854788 | MS.gene024074:intron | 20.0% |
| !! | TAATACATATCAGCATATAA+TGG | - | chr7.1:23853134-23853153 | None:intergenic | 20.0% |
| !! | TATATAGGATTCCAAATAAA+GGG | - | chr7.1:23853616-23853635 | None:intergenic | 20.0% |
| !! | TATTTAAGAAAAGTTATGCT+TGG | - | chr7.1:23855429-23855448 | None:intergenic | 20.0% |
| !! | TTTAAGAACAAAAGATGAAA+TGG | - | chr7.1:23853950-23853969 | None:intergenic | 20.0% |
| !! | TTTAAGCTGTATGAAAATAT+TGG | + | chr7.1:23853468-23853487 | MS.gene024074:intron | 20.0% |
| !!! | AACTGAGCAATATATTTTTA+GGG | - | chr7.1:23854961-23854980 | None:intergenic | 20.0% |
| !!! | AAGCATAACTTTTCTTAAAT+AGG | + | chr7.1:23855428-23855447 | MS.gene024074:intron | 20.0% |
| !!! | TATTTGGAATCCTATATATA+CGG | + | chr7.1:23853618-23853637 | MS.gene024074:intron | 20.0% |
| !!! | TTTCTTCTTTTTTTAACCTT+GGG | + | chr7.1:23853756-23853775 | MS.gene024074:intron | 20.0% |
| !!! | TTTTCTTCTTTTTTTAACCT+TGG | + | chr7.1:23853755-23853774 | MS.gene024074:intron | 20.0% |
| ! | AAAAAAGTTGTTAATGCATG+TGG | + | chr7.1:23854186-23854205 | MS.gene024074:intron | 25.0% |
| ! | AAAAGTTGTCTTGATTTAGA+AGG | + | chr7.1:23854675-23854694 | MS.gene024074:intron | 25.0% |
| ! | AACAATTCCAAAAGACAAAA+GGG | + | chr7.1:23854500-23854519 | MS.gene024074:CDS | 25.0% |
| ! | AAGAAATGTTGAATCCTAAA+AGG | - | chr7.1:23853870-23853889 | None:intergenic | 25.0% |
| ! | AGAACATTTAGTTACTAGAT+TGG | - | chr7.1:23853272-23853291 | None:intergenic | 25.0% |
| ! | AGTTACTAGATTGGTAAAAA+TGG | - | chr7.1:23853263-23853282 | None:intergenic | 25.0% |
| ! | CAAATAGATTCCGTATATAT+AGG | - | chr7.1:23853631-23853650 | None:intergenic | 25.0% |
| ! | GTTGAGTGTACATTTATTTA+TGG | - | chr7.1:23854365-23854384 | None:intergenic | 25.0% |
| ! | TAAGACTCAATCAATAGAAA+GGG | - | chr7.1:23854062-23854081 | None:intergenic | 25.0% |
| ! | TACAGATAGTAACACAAATT+GGG | - | chr7.1:23855665-23855684 | None:intergenic | 25.0% |
| ! | TTAAGACTCAATCAATAGAA+AGG | - | chr7.1:23854063-23854082 | None:intergenic | 25.0% |
| ! | TTACAGATAGTAACACAAAT+TGG | - | chr7.1:23855666-23855685 | None:intergenic | 25.0% |
| !! | CAACTGAGCAATATATTTTT+AGG | - | chr7.1:23854962-23854981 | None:intergenic | 25.0% |
| !!! | AGATTTCAATGATTGACTTT+TGG | + | chr7.1:23854162-23854181 | MS.gene024074:intron | 25.0% |
| !!! | AGCTAGTTTTTTTATGCTTT+TGG | + | chr7.1:23853337-23853356 | MS.gene024074:intron | 25.0% |
| !!! | CTTAAAGAACTCTAAAATGA+TGG | - | chr7.1:23853454-23853473 | None:intergenic | 25.0% |
| !!! | GCTAGTTTTTTTATGCTTTT+GGG | + | chr7.1:23853338-23853357 | MS.gene024074:intron | 25.0% |
| !!! | TCTTTTGACTGATTTTAATC+TGG | + | chr7.1:23854545-23854564 | MS.gene024074:intron | 25.0% |
| AAAGGGCAAAATGAATATAC+TGG | - | chr7.1:23854045-23854064 | None:intergenic | 30.0% | |
| AAGAAAGATGCACATAGATA+AGG | - | chr7.1:23853592-23853611 | None:intergenic | 30.0% | |
| AATCAATATGACTGAGATCA+AGG | - | chr7.1:23854439-23854458 | None:intergenic | 30.0% | |
| ACAAACTCAAATAAATCCCA+AGG | - | chr7.1:23853775-23853794 | None:intergenic | 30.0% | |
| ACTGCCTTACTATTAATACA+AGG | + | chr7.1:23854912-23854931 | MS.gene024074:intron | 30.0% | |
| ACTGTGCACATGTATATAAT+TGG | - | chr7.1:23854129-23854148 | None:intergenic | 30.0% | |
| AGATAGTAATGCATTTGCAA+AGG | - | chr7.1:23854416-23854435 | None:intergenic | 30.0% | |
| ATACATGTGCACAGTAAATT+TGG | + | chr7.1:23854134-23854153 | MS.gene024074:intron | 30.0% | |
| ATGCGTAGCATTATAATTGA+GGG | - | chr7.1:23854752-23854771 | None:intergenic | 30.0% | |
| CAACAATTCCAAAAGACAAA+AGG | + | chr7.1:23854499-23854518 | MS.gene024074:CDS | 30.0% | |
| CAACACAAAAGACTAAAAGA+TGG | - | chr7.1:23854870-23854889 | None:intergenic | 30.0% | |
| CATCTTTCTTACCCTTTATT+TGG | + | chr7.1:23853602-23853621 | MS.gene024074:intron | 30.0% | |
| CCAAGAATCAAACTTAAGTA+GGG | - | chr7.1:23853927-23853946 | None:intergenic | 30.0% | |
| TAAACAGAAGTCAAGCAAAA+TGG | - | chr7.1:23853893-23853912 | None:intergenic | 30.0% | |
| TACATGTGCACAGTAAATTT+GGG | + | chr7.1:23854135-23854154 | MS.gene024074:intron | 30.0% | |
| TACTATCTGTAATCTTCTTC+TGG | + | chr7.1:23855674-23855693 | MS.gene024074:intron | 30.0% | |
| TAGATACAAGAGATTAGCAT+AGG | + | chr7.1:23853516-23853535 | MS.gene024074:intron | 30.0% | |
| TATAATCAACTAAGGAAGCT+AGG | - | chr7.1:23853050-23853069 | None:intergenic | 30.0% | |
| TATACGGAATCTATTTGATC+AGG | + | chr7.1:23853634-23853653 | MS.gene024074:intron | 30.0% | |
| TATGGACCTATACAAAAGAA+GGG | - | chr7.1:23854347-23854366 | None:intergenic | 30.0% | |
| TATGTCAATTGCTACAACTT+TGG | - | chr7.1:23855061-23855080 | None:intergenic | 30.0% | |
| TGTTCTTAAACCAATGTTTC+AGG | + | chr7.1:23853960-23853979 | MS.gene024074:intron | 30.0% | |
| TTATGGACCTATACAAAAGA+AGG | - | chr7.1:23854348-23854367 | None:intergenic | 30.0% | |
| ! | AATCGAATTCATTTGGAACT+TGG | + | chr7.1:23854297-23854316 | MS.gene024074:intron | 30.0% |
| ! | ACATATCAGCATATAATGGA+TGG | - | chr7.1:23853130-23853149 | None:intergenic | 30.0% |
| ! | AGAGCCTTGTATTAATAGTA+AGG | - | chr7.1:23854919-23854938 | None:intergenic | 30.0% |
| ! | AGTAGGAGTATAATCAACTA+AGG | - | chr7.1:23853058-23853077 | None:intergenic | 30.0% |
| ! | TGAATATGGTAGATCCTTTT+AGG | + | chr7.1:23853853-23853872 | MS.gene024074:intron | 30.0% |
| ! | TTGTGATTGGTAGTTTGAAT+GGG | + | chr7.1:23855206-23855225 | MS.gene024074:intron | 30.0% |
| !!! | TTTTGAAGTGTCCTTGTTTA+GGG | + | chr7.1:23855143-23855162 | MS.gene024074:intron | 30.0% |
| AACTAAGGAAGCTAGGAAAT+CGG | - | chr7.1:23853043-23853062 | None:intergenic | 35.0% | |
| AAGTCATAGTTCGGTTCAAA+GGG | - | chr7.1:23853399-23853418 | None:intergenic | 35.0% | |
| ACACTTCATTATGACAGGAT+AGG | + | chr7.1:23854602-23854621 | MS.gene024074:intron | 35.0% | |
| ACATGTGCACAGTAAATTTG+GGG | + | chr7.1:23854136-23854155 | MS.gene024074:intron | 35.0% | |
| AGGAAAATGGAATCAGAAGT+AGG | - | chr7.1:23855503-23855522 | None:intergenic | 35.0% | |
| AGTAATGCATTTGCAAAGGA+AGG | - | chr7.1:23854412-23854431 | None:intergenic | 35.0% | |
| ATAAGACCCTACTTATGCTT+TGG | + | chr7.1:23855467-23855486 | MS.gene024074:intron | 35.0% | |
| ATAGATAAGGACACGAATCA+AGG | - | chr7.1:23853579-23853598 | None:intergenic | 35.0% | |
| ATCTTCATAGAGAAGAGGAT+TGG | + | chr7.1:23855080-23855099 | MS.gene024074:intron | 35.0% | |
| ATGGACCTATACAAAAGAAG+GGG | - | chr7.1:23854346-23854365 | None:intergenic | 35.0% | |
| CATGCGTAGCATTATAATTG+AGG | - | chr7.1:23854753-23854772 | None:intergenic | 35.0% | |
| CATTCAAACTACCAATCACA+AGG | - | chr7.1:23855207-23855226 | None:intergenic | 35.0% | |
| CCCTACTTAAGTTTGATTCT+TGG | + | chr7.1:23853924-23853943 | MS.gene024074:intron | 35.0% | |
| CCTTAATGAATGTGTGTCTA+AGG | + | chr7.1:23854245-23854264 | MS.gene024074:intron | 35.0% | |
| CCTTAGACACACATTCATTA+AGG | - | chr7.1:23854248-23854267 | None:intergenic | 35.0% | |
| GACACACATTCATTAAGGAA+AGG | - | chr7.1:23854243-23854262 | None:intergenic | 35.0% | |
| GACATATCTTCATAGAGAAG+AGG | + | chr7.1:23855075-23855094 | MS.gene024074:intron | 35.0% | |
| GCCAAGAATCAAACTTAAGT+AGG | - | chr7.1:23853928-23853947 | None:intergenic | 35.0% | |
| GGCAAAATGAATATACTGGA+GGG | - | chr7.1:23854041-23854060 | None:intergenic | 35.0% | |
| GGCTATCAGCAAAATATTCT+TGG | - | chr7.1:23855844-23855863 | None:intergenic | 35.0% | |
| GTAATGCATTTGCAAAGGAA+GGG | - | chr7.1:23854411-23854430 | None:intergenic | 35.0% | |
| GTGTGGATATATCCATATGT+AGG | - | chr7.1:23854819-23854838 | None:intergenic | 35.0% | |
| TAAGAACTTGTCTAGATGTG+TGG | - | chr7.1:23854836-23854855 | None:intergenic | 35.0% | |
| TAAGACCCTACTTATGCTTT+GGG | + | chr7.1:23855468-23855487 | MS.gene024074:intron | 35.0% | |
| TAATGCATTTGCAAAGGAAG+GGG | - | chr7.1:23854410-23854429 | None:intergenic | 35.0% | |
| TAATGCTAGGGATTAAACCT+GGG | + | chr7.1:23855568-23855587 | MS.gene024074:intron | 35.0% | |
| TACATGTGTGCTTGTGAATA+TGG | + | chr7.1:23853839-23853858 | MS.gene024074:intron | 35.0% | |
| TACTGACACTTCATTATGAC+AGG | + | chr7.1:23854597-23854616 | MS.gene024074:intron | 35.0% | |
| TCTTCATAGAGAAGAGGATT+GGG | + | chr7.1:23855081-23855100 | MS.gene024074:intron | 35.0% | |
| TGGTGAACGAAAAAGAAAAG+AGG | - | chr7.1:23853243-23853262 | None:intergenic | 35.0% | |
| TGTTGCAAGTTTAGAGAAGA+TGG | + | chr7.1:23854999-23855018 | MS.gene024074:intron | 35.0% | |
| TTAATGCTAGGGATTAAACC+TGG | + | chr7.1:23855567-23855586 | MS.gene024074:intron | 35.0% | |
| TTCTGCAACAAATTTCTGAG+TGG | - | chr7.1:23854005-23854024 | None:intergenic | 35.0% | |
| TTTATTCTGTGTGAGTGTGA+GGG | + | chr7.1:23853361-23853380 | MS.gene024074:intron | 35.0% | |
| TTTCACTTGACGTTAACTGT+AGG | + | chr7.1:23854457-23854476 | MS.gene024074:intron | 35.0% | |
| ! | ACTAGTTTAACTGACAACCT+TGG | - | chr7.1:23853673-23853692 | None:intergenic | 35.0% |
| ! | CTTGTGATTGGTAGTTTGAA+TGG | + | chr7.1:23855205-23855224 | MS.gene024074:intron | 35.0% |
| ! | GCTCTCTTTTATGAACAGTA+TGG | + | chr7.1:23855803-23855822 | MS.gene024074:intron | 35.0% |
| ! | TCTATCCCCTTCTTTTGTAT+AGG | + | chr7.1:23854338-23854357 | MS.gene024074:intron | 35.0% |
| ! | TTCTGATTCCATTTTCCTTG+AGG | + | chr7.1:23855505-23855524 | MS.gene024074:intron | 35.0% |
| ! | TTTTCTTGTGTCCTTGTGAT+TGG | + | chr7.1:23855193-23855212 | MS.gene024074:intron | 35.0% |
| !! | GAACTCTAAAATGATGGTAG+AGG | - | chr7.1:23853448-23853467 | None:intergenic | 35.0% |
| !! | GTTTTAGATACCAGATGAGT+TGG | + | chr7.1:23853161-23853180 | MS.gene024074:intron | 35.0% |
| !! | TGTCATTTGTGGTGTCTTTT+GGG | - | chr7.1:23855601-23855620 | None:intergenic | 35.0% |
| !!! | GTTTTGAAGTGTCCTTGTTT+AGG | + | chr7.1:23855142-23855161 | MS.gene024074:intron | 35.0% |
| AATCAAGTTCAAGCGAAGGA+AGG | + | chr7.1:23852995-23853014 | MS.gene024074:CDS | 40.0% | |
| ACGATGCATTTGCCTACATA+TGG | + | chr7.1:23854804-23854823 | MS.gene024074:intron | 40.0% | |
| AGTTTAGAGAAGATGGTGTG+TGG | + | chr7.1:23855006-23855025 | MS.gene024074:intron | 40.0% | |
| ATCAAGTTCAAGCGAAGGAA+GGG | + | chr7.1:23852996-23853015 | MS.gene024074:CDS | 40.0% | |
| ATGTAGGCAAATGCATCGTT+GGG | - | chr7.1:23854803-23854822 | None:intergenic | 40.0% | |
| CAAGTCATAGTTCGGTTCAA+AGG | - | chr7.1:23853400-23853419 | None:intergenic | 40.0% | |
| CAATTGCTACAACTTTGGCA+AGG | - | chr7.1:23855056-23855075 | None:intergenic | 40.0% | |
| CCAATCTAGTCCTGAAACAT+TGG | - | chr7.1:23853973-23853992 | None:intergenic | 40.0% | |
| CCAATGTTTCAGGACTAGAT+TGG | + | chr7.1:23853970-23853989 | MS.gene024074:intron | 40.0% | |
| CTTCATAGAGAAGAGGATTG+GGG | + | chr7.1:23855082-23855101 | MS.gene024074:intron | 40.0% | |
| CTTTGAACCGAACTATGACT+TGG | + | chr7.1:23853398-23853417 | MS.gene024074:intron | 40.0% | |
| GAATTCCATTCTGCAAGTAG+AGG | + | chr7.1:23855388-23855407 | MS.gene024074:intron | 40.0% | |
| GATCTTCCATCGTCAAAACA+AGG | - | chr7.1:23854630-23854649 | None:intergenic | 40.0% | |
| GCTTACCCAAAGCATAAGTA+GGG | - | chr7.1:23855476-23855495 | None:intergenic | 40.0% | |
| GGGCAAAATGAATATACTGG+AGG | - | chr7.1:23854042-23854061 | None:intergenic | 40.0% | |
| GTGAAAAGTGAACTGACAGT+AGG | - | chr7.1:23853075-23853094 | None:intergenic | 40.0% | |
| GTTTATTCTGTGTGAGTGTG+AGG | + | chr7.1:23853360-23853379 | MS.gene024074:intron | 40.0% | |
| TAAAATGATGGTAGAGGCCT+CGG | - | chr7.1:23853442-23853461 | None:intergenic | 40.0% | |
| TATGTAGGCAAATGCATCGT+TGG | - | chr7.1:23854804-23854823 | None:intergenic | 40.0% | |
| TCCAACTCCAAGTCATAGTT+CGG | - | chr7.1:23853408-23853427 | None:intergenic | 40.0% | |
| TGCTTACCCAAAGCATAAGT+AGG | - | chr7.1:23855477-23855496 | None:intergenic | 40.0% | |
| ! | ACTTATGCTTTGGGTAAGCA+AGG | + | chr7.1:23855477-23855496 | MS.gene024074:intron | 40.0% |
| ! | TGGTAAAGCACTCTTCCATT+CGG | + | chr7.1:23855541-23855560 | MS.gene024074:intron | 40.0% |
| ! | TGTCTGTCCCTTTTGTCTTT+TGG | - | chr7.1:23854510-23854529 | None:intergenic | 40.0% |
| ! | TGTGTCTAAGGCACTTTGTA+GGG | + | chr7.1:23854257-23854276 | MS.gene024074:intron | 40.0% |
| ! | TTAGATACCAGATGAGTTGG+TGG | + | chr7.1:23853164-23853183 | MS.gene024074:intron | 40.0% |
| !! | AAATTTGTTGCAGAAGTCGC+AGG | + | chr7.1:23854010-23854029 | MS.gene024074:CDS | 40.0% |
| !!! | GTGTCATTTGTGGTGTCTTT+TGG | - | chr7.1:23855602-23855621 | None:intergenic | 40.0% |
| AATGAGCCCTAAAGCAACAG+AGG | - | chr7.1:23855122-23855141 | None:intergenic | 45.0% | |
| ACCACTTGTGGTCTCTTATG+CGG | + | chr7.1:23855630-23855649 | MS.gene024074:intron | 45.0% | |
| AGGACATTGAAAGCCACTCT+TGG | - | chr7.1:23853202-23853221 | None:intergenic | 45.0% | |
| CAAAAGGGACAGACAACAGA+AGG | + | chr7.1:23854515-23854534 | MS.gene024074:CDS | 45.0% | |
| CCATTCGGGGTTTAATGCTA+GGG | + | chr7.1:23855556-23855575 | MS.gene024074:intron | 45.0% | |
| CCTTCGCTTGAACTTGATTG+CGG | - | chr7.1:23852994-23853013 | None:intergenic | 45.0% | |
| CTAGACACAGTGAATGCGTA+TGG | - | chr7.1:23854577-23854596 | None:intergenic | 45.0% | |
| GGAAAAATTCCATCCGACAC+TGG | - | chr7.1:23854222-23854241 | None:intergenic | 45.0% | |
| GGTACTCACAATCTCACATC+AGG | - | chr7.1:23853222-23853241 | None:intergenic | 45.0% | |
| GTCAGACTGAACCCTAAACA+AGG | - | chr7.1:23855157-23855176 | None:intergenic | 45.0% | |
| TAAGAGACCACAAGTGGTAG+TGG | - | chr7.1:23855628-23855647 | None:intergenic | 45.0% | |
| TAATGCTCCACCAACTCATC+TGG | - | chr7.1:23853174-23853193 | None:intergenic | 45.0% | |
| TAGAGAAGATGGTGTGTGGT+TGG | + | chr7.1:23855010-23855029 | MS.gene024074:intron | 45.0% | |
| TCCATTCGGGGTTTAATGCT+AGG | + | chr7.1:23855555-23855574 | MS.gene024074:intron | 45.0% | |
| TGGATGAAGTTGACCAGTGT+CGG | + | chr7.1:23854206-23854225 | MS.gene024074:intron | 45.0% | |
| TGTCAGACTGAGCCTAAACA+AGG | - | chr7.1:23855250-23855269 | None:intergenic | 45.0% | |
| TTCTGCCTCTACTTGCAGAA+TGG | - | chr7.1:23855396-23855415 | None:intergenic | 45.0% | |
| ! | AACTTGATTGCGGCTGATTC+TGG | - | chr7.1:23852984-23853003 | None:intergenic | 45.0% |
| ! | ACCGAACTATGACTTGGAGT+TGG | + | chr7.1:23853404-23853423 | MS.gene024074:intron | 45.0% |
| ! | GATTCCATTTTCCTTGAGGC+TGG | + | chr7.1:23855509-23855528 | MS.gene024074:intron | 45.0% |
| ! | GGTAAAGCACTCTTCCATTC+GGG | + | chr7.1:23855542-23855561 | MS.gene024074:intron | 45.0% |
| ! | GTAAAGCACTCTTCCATTCG+GGG | + | chr7.1:23855543-23855562 | MS.gene024074:intron | 45.0% |
| ! | GTGTGTCTAAGGCACTTTGT+AGG | + | chr7.1:23854256-23854275 | MS.gene024074:intron | 45.0% |
| !! | AGCATTGCCTCTGTTGCTTT+AGG | + | chr7.1:23855112-23855131 | MS.gene024074:intron | 45.0% |
| !! | GCATTGCCTCTGTTGCTTTA+GGG | + | chr7.1:23855113-23855132 | MS.gene024074:intron | 45.0% |
| !! | TGAGTTGGTGGAGCATTACT+TGG | + | chr7.1:23853176-23853195 | MS.gene024074:CDS | 45.0% |
| !! | TTGTGGTGTCTTTTGGGAAG+AGG | - | chr7.1:23855595-23855614 | None:intergenic | 45.0% |
| ATTCTGTGTGAGTGTGAGGG+TGG | + | chr7.1:23853364-23853383 | MS.gene024074:intron | 50.0% | |
| CAATTGTGCTTCCAGCCTCA+AGG | - | chr7.1:23855523-23855542 | None:intergenic | 50.0% | |
| CAGGTTGCAGTGTGAAACCA+AGG | + | chr7.1:23853653-23853672 | MS.gene024074:intron | 50.0% | |
| CCACTTGTGGTCTCTTATGC+GGG | + | chr7.1:23855631-23855650 | MS.gene024074:intron | 50.0% | |
| CCCTAGCATTAAACCCCGAA+TGG | - | chr7.1:23855559-23855578 | None:intergenic | 50.0% | |
| CCGCAATCAAGTTCAAGCGA+AGG | + | chr7.1:23852991-23853010 | MS.gene024074:CDS | 50.0% | |
| GAGCATTACTTGGCCAAGAG+TGG | + | chr7.1:23853186-23853205 | MS.gene024074:CDS | 50.0% | |
| GCTTCCAGCCTCAAGGAAAA+TGG | - | chr7.1:23855516-23855535 | None:intergenic | 50.0% | |
| GTCAGACTGAGCCCTAAACA+AGG | - | chr7.1:23855342-23855361 | None:intergenic | 50.0% | |
| TGATAGCCCTTCGACTGGAA+TGG | + | chr7.1:23855856-23855875 | MS.gene024074:CDS | 50.0% | |
| TGGTGTTCACAGTGGGAAGA+AGG | + | chr7.1:23855030-23855049 | MS.gene024074:intron | 50.0% | |
| TTTGCTGATAGCCCTTCGAC+TGG | + | chr7.1:23855851-23855870 | MS.gene024074:CDS | 50.0% | |
| ! | ACTGTAGGCACTGCAAAGCA+AGG | + | chr7.1:23854472-23854491 | MS.gene024074:intron | 50.0% |
| ! | CTTGAGGCTGGAAGCACAAT+TGG | + | chr7.1:23855521-23855540 | MS.gene024074:intron | 50.0% |
| ! | GTGTGGTTGGTGTTCACAGT+GGG | + | chr7.1:23855023-23855042 | MS.gene024074:intron | 50.0% |
| ! | TGAAGTTGACCAGTGTCGGA+TGG | + | chr7.1:23854210-23854229 | MS.gene024074:intron | 50.0% |
| ! | TGTGTGGTTGGTGTTCACAG+TGG | + | chr7.1:23855022-23855041 | MS.gene024074:intron | 50.0% |
| !! | GTAGTGGCTGGTGTCATTTG+TGG | - | chr7.1:23855612-23855631 | None:intergenic | 50.0% |
| !! | TCTATCGAAAGCACTGCGTG+AGG | + | chr7.1:23854648-23854667 | MS.gene024074:CDS | 50.0% |
| !!! | TAGGCGCCTTGTTTTGACGA+TGG | + | chr7.1:23854621-23854640 | MS.gene024074:CDS | 50.0% |
| ACACCAGCCACTACCACTTG+TGG | + | chr7.1:23855618-23855637 | MS.gene024074:intron | 55.0% | |
| CAGGGTCCATTCCAGTCGAA+GGG | - | chr7.1:23855865-23855884 | None:intergenic | 55.0% | |
| CCCGCATAAGAGACCACAAG+TGG | - | chr7.1:23855634-23855653 | None:intergenic | 55.0% | |
| TAGAGGCCTCGGACTCAGAA+CGG | - | chr7.1:23853431-23853450 | None:intergenic | 55.0% | |
| ! | CATCGTTGGGAGCACATACC+GGG | - | chr7.1:23854790-23854809 | None:intergenic | 55.0% |
| ! | GCATCGTTGGGAGCACATAC+CGG | - | chr7.1:23854791-23854810 | None:intergenic | 55.0% |
| !! | AGACCACAAGTGGTAGTGGC+TGG | - | chr7.1:23855624-23855643 | None:intergenic | 55.0% |
| !! | GTCTTTTGGGAAGAGGACCC+AGG | - | chr7.1:23855588-23855607 | None:intergenic | 55.0% |
| GCAGGGTCCATTCCAGTCGA+AGG | - | chr7.1:23855866-23855885 | None:intergenic | 60.0% | |
| ! | GTTGGACCGTTCTGAGTCCG+AGG | + | chr7.1:23853422-23853441 | MS.gene024074:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 23852976 | 23855901 | 23852976 | ID=MS.gene024074 |
| chr7.1 | mRNA | 23852976 | 23855901 | 23852976 | ID=MS.gene024074.t1;Parent=MS.gene024074 |
| chr7.1 | exon | 23852976 | 23853077 | 23852976 | ID=MS.gene024074.t1.exon1;Parent=MS.gene024074.t1 |
| chr7.1 | CDS | 23852976 | 23853077 | 23852976 | ID=cds.MS.gene024074.t1;Parent=MS.gene024074.t1 |
| chr7.1 | exon | 23853168 | 23853232 | 23853168 | ID=MS.gene024074.t1.exon2;Parent=MS.gene024074.t1 |
| chr7.1 | CDS | 23853168 | 23853232 | 23853168 | ID=cds.MS.gene024074.t1;Parent=MS.gene024074.t1 |
| chr7.1 | exon | 23853982 | 23854044 | 23853982 | ID=MS.gene024074.t1.exon3;Parent=MS.gene024074.t1 |
| chr7.1 | CDS | 23853982 | 23854044 | 23853982 | ID=cds.MS.gene024074.t1;Parent=MS.gene024074.t1 |
| chr7.1 | exon | 23854479 | 23854536 | 23854479 | ID=MS.gene024074.t1.exon4;Parent=MS.gene024074.t1 |
| chr7.1 | CDS | 23854479 | 23854536 | 23854479 | ID=cds.MS.gene024074.t1;Parent=MS.gene024074.t1 |
| chr7.1 | exon | 23854619 | 23854669 | 23854619 | ID=MS.gene024074.t1.exon5;Parent=MS.gene024074.t1 |
| chr7.1 | CDS | 23854619 | 23854669 | 23854619 | ID=cds.MS.gene024074.t1;Parent=MS.gene024074.t1 |
| chr7.1 | exon | 23855821 | 23855901 | 23855821 | ID=MS.gene024074.t1.exon6;Parent=MS.gene024074.t1 |
| chr7.1 | CDS | 23855821 | 23855901 | 23855821 | ID=cds.MS.gene024074.t1;Parent=MS.gene024074.t1 |
| Gene Sequence |
| Protein sequence |
