Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024268.t1 | XP_003624483.2 | 99.2 | 864 | 7 | 0 | 1 | 864 | 1 | 864 | 0.00E+00 | 1640.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024268.t1 | Q9SIU2 | 63.4 | 864 | 298 | 5 | 1 | 862 | 1 | 848 | 0.0e+00 | 1110.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024268.t1 | G7KX77 | 99.2 | 864 | 7 | 0 | 1 | 864 | 1 | 864 | 0.0e+00 | 1640.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene024268 | MS.gene017522 | PPI |
| MS.gene024268 | MS.gene23804 | PPI |
| MS.gene024268 | MS.gene066507 | PPI |
| MS.gene024268 | MS.gene27229 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024268.t1 | MTR_7g083840 | 99.190 | 864 | 7 | 0 | 1 | 864 | 1 | 864 | 0.0 | 1769 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024268.t1 | AT2G13540 | 65.394 | 864 | 281 | 5 | 1 | 862 | 1 | 848 | 0.0 | 1180 |
Find 198 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGAAAAGATTGCTGATT+TGG | 0.191480 | 7.4:+23261427 | MS.gene024268:CDS |
| AATTCGCCTTATGTTCCTTC+TGG | 0.196266 | 7.4:+23257226 | MS.gene024268:CDS |
| AAGACATCCACTAGAGAATT+TGG | 0.210575 | 7.4:-23255222 | None:intergenic |
| TAGCTGAAGTCAGTTCTTTC+TGG | 0.211993 | 7.4:+23263514 | MS.gene024268:CDS |
| CCACTCCCAAACTGAGATTT+TGG | 0.224578 | 7.4:+23250712 | MS.gene024268:CDS |
| AAGAAATAACATCTCTTAAA+AGG | 0.247079 | 7.4:+23264005 | MS.gene024268:CDS |
| CCTCACAAGATTCCTTTCTA+TGG | 0.254169 | 7.4:+23251724 | MS.gene024268:CDS |
| GTTCCTTCTGGGGTATCTTT+TGG | 0.255164 | 7.4:+23257238 | MS.gene024268:CDS |
| GCAAACTCGATCTAAATTTC+AGG | 0.265701 | 7.4:+23252860 | MS.gene024268:CDS |
| TTCAATCTATTCAACCTTGC+AGG | 0.273305 | 7.4:-23264133 | None:intergenic |
| ACAACAGTAGATGAGGAAAA+AGG | 0.275639 | 7.4:+23255270 | MS.gene024268:CDS |
| GTGGATGGTGAACCAGTTAT+TGG | 0.277376 | 7.4:+23264103 | MS.gene024268:CDS |
| TATATTTCCATCCAGTAAAA+TGG | 0.284108 | 7.4:+23257315 | MS.gene024268:CDS |
| ATTGATCAAGCCTCGTTAAT+TGG | 0.288350 | 7.4:-23265718 | None:intergenic |
| CAATCGCTATTGCTGTCATT+TGG | 0.299049 | 7.4:-23263548 | None:intergenic |
| TTTCGGTCAGCTGTTTGTTT+TGG | 0.302187 | 7.4:+23265685 | MS.gene024268:CDS |
| GAAGGAACATAAGGCGAATT+TGG | 0.303337 | 7.4:-23257223 | None:intergenic |
| ATTTAGGATGCTCTAGATAC+TGG | 0.307297 | 7.4:+23254711 | MS.gene024268:intron |
| GTACAAACTCTTCTCAATAT+TGG | 0.309175 | 7.4:+23263396 | MS.gene024268:CDS |
| TGTCTTTGTTCAGGAGGTTT+TGG | 0.309499 | 7.4:+23262906 | MS.gene024268:CDS |
| CCCAAATGCATGGGACTTCC+CGG | 0.317575 | 7.4:-23257179 | None:intergenic |
| ACCGGGAAGTCCCATGCATT+TGG | 0.322827 | 7.4:+23257178 | MS.gene024268:CDS |
| CAGCTCAACGACATGGTTAA+AGG | 0.323238 | 7.4:+23263288 | MS.gene024268:CDS |
| ATAACTGTATTAGAAAGATA+TGG | 0.324745 | 7.4:+23263441 | MS.gene024268:CDS |
| AAAGATTGCTGATTTGGATA+TGG | 0.332136 | 7.4:+23261433 | MS.gene024268:CDS |
| CCCTCAACGTGTCTTTGTTC+AGG | 0.333162 | 7.4:+23262897 | MS.gene024268:CDS |
| TTTGAAGCTCAGCTGGTTAC+CGG | 0.343165 | 7.4:+23257160 | MS.gene024268:CDS |
| TTCTTTCATGGTTGGTCTGC+CGG | 0.349288 | 7.4:+23258498 | MS.gene024268:CDS |
| GGGAAGTTCGCTTGTCATAC+TGG | 0.349697 | 7.4:+23262932 | MS.gene024268:CDS |
| TCAAAGGAAAGATGGGTTCT+TGG | 0.358169 | 7.4:-23257142 | None:intergenic |
| AAAGGAATGTGCTTCTTTCA+TGG | 0.358284 | 7.4:+23258486 | MS.gene024268:CDS |
| TCCATTGTCGACGACTCTTC+AGG | 0.358674 | 7.4:-23265060 | None:intergenic |
| ACTTTCAGTTCATCTGGCCT+TGG | 0.361442 | 7.4:+23262836 | MS.gene024268:CDS |
| TCGGAGGAAGTTCCATATTC+AGG | 0.366734 | 7.4:-23250549 | None:intergenic |
| TCAGCACATGGCTGCCATAA+AGG | 0.368473 | 7.4:-23255297 | None:intergenic |
| AATCGCTATTGCTGTCATTT+GGG | 0.379502 | 7.4:-23263547 | None:intergenic |
| TTACCTCCAAAATCTCAGTT+TGG | 0.383019 | 7.4:-23250718 | None:intergenic |
| CCGGGAAGTCCCATGCATTT+GGG | 0.384687 | 7.4:+23257179 | MS.gene024268:CDS |
| GCTATGCAATAGGCTCTTCC+TGG | 0.387049 | 7.4:+23261365 | MS.gene024268:intron |
| CTATCGACTTGTATCAAATC+TGG | 0.387470 | 7.4:+23263584 | MS.gene024268:CDS |
| TGGATGGTGAACCAGTTATT+GGG | 0.387842 | 7.4:+23264104 | MS.gene024268:CDS |
| GGCGACAAGAGTCCTGAATA+TGG | 0.391354 | 7.4:+23250537 | MS.gene024268:CDS |
| CACGTTGAGGGGCCCACCTC+GGG | 0.396941 | 7.4:-23262885 | None:intergenic |
| ATTCGCCTTATGTTCCTTCT+GGG | 0.397735 | 7.4:+23257227 | MS.gene024268:CDS |
| GGTTATTATTGACCTTTGTA+AGG | 0.404580 | 7.4:+23261175 | MS.gene024268:CDS |
| TCAGATTGGCCTGATAAACT+TGG | 0.405648 | 7.4:+23252806 | MS.gene024268:intron |
| AACAATGAACACCTGCTGTC+TGG | 0.408312 | 7.4:+23263264 | MS.gene024268:CDS |
| AATCGCCTTCCCAAGGGATC+TGG | 0.411924 | 7.4:+23264982 | MS.gene024268:CDS |
| CTTTCAGTTCATCTGGCCTT+GGG | 0.415312 | 7.4:+23262837 | MS.gene024268:CDS |
| ACAACCGTATTTCTGATCTA+AGG | 0.416149 | 7.4:+23263981 | MS.gene024268:CDS |
| TTTAGCCGCCGTATTCTTTG+AGG | 0.417939 | 7.4:-23257292 | None:intergenic |
| ATAATTTGCTTGTCCTCGTC+AGG | 0.426242 | 7.4:-23263486 | None:intergenic |
| TATCATGCCTCCCATGGGGT+GGG | 0.427608 | 7.4:+23255340 | MS.gene024268:CDS |
| GCCGAACAAGACTAATCCTT+TGG | 0.430206 | 7.4:+23261459 | MS.gene024268:CDS |
| GGTCAAACTTTCAGTTCATC+TGG | 0.430223 | 7.4:+23262830 | MS.gene024268:intron |
| CATTCTTCATCAACGATGAA+TGG | 0.431835 | 7.4:+23250489 | None:intergenic |
| TCTTTCCTTTGAAGCTCAGC+TGG | 0.431957 | 7.4:+23257153 | MS.gene024268:CDS |
| ATCATGCCTCCCATGGGGTG+GGG | 0.432268 | 7.4:+23255341 | MS.gene024268:CDS |
| TACCTCCAAAATCTCAGTTT+GGG | 0.434033 | 7.4:-23250717 | None:intergenic |
| TGCTTCTGTATTTCAATGGC+AGG | 0.438477 | 7.4:+23258132 | MS.gene024268:CDS |
| TTGAAATTCGGTCCACCCTT+CGG | 0.442007 | 7.4:-23263216 | None:intergenic |
| ACCAAAGGATTAGTCTTGTT+CGG | 0.442652 | 7.4:-23261460 | None:intergenic |
| TTTACCAGGGTTCCATAGAA+AGG | 0.449010 | 7.4:-23251736 | None:intergenic |
| TACTCATATCGGAAGGAAAC+CGG | 0.449946 | 7.4:-23258517 | None:intergenic |
| AATGCGGCTGATGACTGTTA+TGG | 0.450028 | 7.4:+23254758 | MS.gene024268:CDS |
| AGCTCAACGACATGGTTAAA+GGG | 0.451062 | 7.4:+23263289 | MS.gene024268:CDS |
| CTTTCCTTAGATCAGAAATA+CGG | 0.452184 | 7.4:-23263985 | None:intergenic |
| ATAAGGCGAATTTGGTAAGT+TGG | 0.453192 | 7.4:-23257215 | None:intergenic |
| TTCAATCTTGGTGCAGAAGA+TGG | 0.453352 | 7.4:+23263234 | MS.gene024268:CDS |
| CAGTGTCAGAAGTATGCTTT+CGG | 0.455092 | 7.4:-23255556 | None:intergenic |
| AGAATCAGATACCTCAAAAC+AGG | 0.456813 | 7.4:+23265094 | MS.gene024268:CDS |
| AAAAGTGTTGCTTATAATGT+AGG | 0.463225 | 7.4:+23265249 | MS.gene024268:CDS |
| TAAAGTATCCTCAAAGAATA+CGG | 0.465003 | 7.4:+23257284 | MS.gene024268:CDS |
| GGTGGACCGAATTTCAATCT+TGG | 0.467640 | 7.4:+23263222 | MS.gene024268:CDS |
| TCCACCACAAATCGATCTAT+AGG | 0.468884 | 7.4:-23258092 | None:intergenic |
| GACGTGCTTCTGTATTTCAA+TGG | 0.474115 | 7.4:+23258128 | MS.gene024268:CDS |
| GGCTGAGACAATATTCTCTC+AGG | 0.475219 | 7.4:+23258546 | MS.gene024268:CDS |
| ATGGGCCCATATTGAAAAGT+TGG | 0.477163 | 7.4:+23265627 | MS.gene024268:CDS |
| TGTTCTAGCTCCAGATCCCT+TGG | 0.478538 | 7.4:-23264992 | None:intergenic |
| TGCTTATAATGTAGGTGAAA+AGG | 0.479206 | 7.4:+23265257 | MS.gene024268:CDS |
| TCATCTGGCCTTGGGAAGAG+TGG | 0.481495 | 7.4:+23262845 | MS.gene024268:CDS |
| TCTGCACCAAGATTGAAATT+CGG | 0.482025 | 7.4:-23263228 | None:intergenic |
| ACGACGAAGGACACCAAAAC+AGG | 0.484040 | 7.4:-23250681 | None:intergenic |
| GCTGAGCTTCAAAGGAAAGA+TGG | 0.487268 | 7.4:-23257150 | None:intergenic |
| GAATGTGCTTCTTTCATGGT+TGG | 0.490296 | 7.4:+23258490 | MS.gene024268:CDS |
| CGTTGAGCTGTCCAGACAGC+AGG | 0.498763 | 7.4:-23263275 | None:intergenic |
| CAGCCATGAGGTACTCATAT+CGG | 0.501823 | 7.4:-23258528 | None:intergenic |
| ATACTGGGACAAAGTCAAAC+AGG | 0.502101 | 7.4:+23262948 | MS.gene024268:CDS |
| TAACTGTATTAGAAAGATAT+GGG | 0.505446 | 7.4:+23263442 | MS.gene024268:CDS |
| TTATCATGCCTCCCATGGGG+TGG | 0.506551 | 7.4:+23255339 | MS.gene024268:CDS |
| TTCATACAACAGATCGTCCA+TGG | 0.507264 | 7.4:+23263649 | MS.gene024268:CDS |
| GATACCCCAGAAGGAACATA+AGG | 0.507465 | 7.4:-23257232 | None:intergenic |
| AGAAGAATTGCTTCCTCCGA+AGG | 0.509749 | 7.4:+23263200 | MS.gene024268:CDS |
| AGCTTACTGTCCCAAATGCA+TGG | 0.510420 | 7.4:-23257189 | None:intergenic |
| TCAAGAATCTGTAGAAGCTA+AGG | 0.511414 | 7.4:+23264195 | MS.gene024268:CDS |
| CAAATCTGGCAATTGTGAGA+TGG | 0.512027 | 7.4:+23263598 | MS.gene024268:CDS |
| CATCTGGCCTTGGGAAGAGT+GGG | 0.514875 | 7.4:+23262846 | MS.gene024268:CDS |
| ACTGCTCCAGCAACAACTGC+AGG | 0.516612 | 7.4:-23261395 | None:intergenic |
| AAATCTGGCAATTGTGAGAT+GGG | 0.518675 | 7.4:+23263599 | MS.gene024268:CDS |
| CATGAGATTATTTCACGGAC+AGG | 0.521752 | 7.4:-23263318 | None:intergenic |
| TCAATCTATTCAACCTTGCA+GGG | 0.522379 | 7.4:-23264132 | None:intergenic |
| CCTGATAAACTTGGAAAATG+AGG | 0.524035 | 7.4:+23252815 | MS.gene024268:CDS |
| TTGAAGCTCAGCTGGTTACC+GGG | 0.525308 | 7.4:+23257161 | MS.gene024268:CDS |
| CTGTCCGTGAAATAATCTCA+TGG | 0.529734 | 7.4:+23263319 | MS.gene024268:CDS |
| GGTAACCAGCTGAGCTTCAA+AGG | 0.531878 | 7.4:-23257158 | None:intergenic |
| ATTACTCTCTCAATATCTTC+AGG | 0.532069 | 7.4:-23255506 | None:intergenic |
| CTGAGCTTCAAAGGAAAGAT+GGG | 0.532305 | 7.4:-23257149 | None:intergenic |
| CTATTCTACAGTCAGTCAAA+TGG | 0.532364 | 7.4:+23265219 | MS.gene024268:intron |
| TATCAAGTGAGTGAAACTCT+TGG | 0.533347 | 7.4:-23263421 | None:intergenic |
| CAAGTCGATAGCTCATCATT+CGG | 0.534282 | 7.4:-23263572 | None:intergenic |
| CTTCATCAACGATGAATGGT+TGG | 0.542224 | 7.4:+23250493 | None:intergenic |
| CAATCCATGAGATTATTTCA+CGG | 0.544809 | 7.4:-23263323 | None:intergenic |
| GGAAGTTCGCTTGTCATACT+GGG | 0.546665 | 7.4:+23262933 | MS.gene024268:CDS |
| GTTGGAGAAGCCTCATTCTA+CGG | 0.548073 | 7.4:+23250511 | MS.gene024268:CDS |
| CGAGAGAGATCTTAATAACA+AGG | 0.552720 | 7.4:+23255610 | MS.gene024268:CDS |
| GTTCTAGCTCCAGATCCCTT+GGG | 0.553112 | 7.4:-23264991 | None:intergenic |
| AGTAGCGTACTGCCTAGAAA+AGG | 0.555517 | 7.4:-23265316 | None:intergenic |
| TGAAGATATTGAGAGAGTAA+TGG | 0.556496 | 7.4:+23255508 | MS.gene024268:CDS |
| GTCTACACAAGTTGAAGAGA+TGG | 0.558986 | 7.4:+23265029 | MS.gene024268:CDS |
| CGAAAGCATACTTCTGACAC+TGG | 0.560825 | 7.4:+23255557 | MS.gene024268:CDS |
| ACAAGTTCAGCCCCACCCCA+TGG | 0.560898 | 7.4:-23255351 | None:intergenic |
| GCAGCCTATAGATCGATTTG+TGG | 0.562037 | 7.4:+23258088 | MS.gene024268:CDS |
| CCTGAACAAAGACACGTTGA+GGG | 0.562127 | 7.4:-23262897 | None:intergenic |
| ACAACTGCAGGAAAAGCTCC+AGG | 0.562627 | 7.4:-23261383 | None:intergenic |
| ACAAATGGTGTGAGAACCAA+AGG | 0.562640 | 7.4:-23261475 | None:intergenic |
| GAGCTAGAACACTTCGCGAA+TGG | 0.563011 | 7.4:+23265004 | MS.gene024268:CDS |
| TCAACGTGTCTTTGTTCAGG+AGG | 0.563282 | 7.4:+23262900 | MS.gene024268:CDS |
| TTCTACAGTCAGTCAAATGG+TGG | 0.566104 | 7.4:+23265222 | MS.gene024268:intron |
| AACAATATGATCTTTGAAGT+CGG | 0.566774 | 7.4:-23250568 | None:intergenic |
| AATGGATGGAAAGTTGAAAG+TGG | 0.570715 | 7.4:+23256828 | MS.gene024268:CDS |
| CTTCCGATATGAGTACCTCA+TGG | 0.572856 | 7.4:+23258525 | MS.gene024268:CDS |
| CTAGATACTGGAAACTGCAA+TGG | 0.574958 | 7.4:+23254723 | MS.gene024268:CDS |
| TCCTGAAGAGTCGTCGACAA+TGG | 0.575034 | 7.4:+23265059 | MS.gene024268:CDS |
| GCCTATAGATCGATTTGTGG+TGG | 0.575474 | 7.4:+23258091 | MS.gene024268:CDS |
| GAAGAATTGCTTCCTCCGAA+GGG | 0.576132 | 7.4:+23263201 | MS.gene024268:CDS |
| TTCGCCTTATGTTCCTTCTG+GGG | 0.576809 | 7.4:+23257228 | MS.gene024268:CDS |
| GTGTAATACGCTGGTTTGAA+AGG | 0.578503 | 7.4:-23261149 | None:intergenic |
| CACTACTTTGAGTTATGTGA+AGG | 0.578607 | 7.4:+23265293 | MS.gene024268:CDS |
| CCAAAATCTCAGTTTGGGAG+TGG | 0.579247 | 7.4:-23250712 | None:intergenic |
| ATGTGTTAGATCTCCCGAGG+TGG | 0.582322 | 7.4:+23262872 | MS.gene024268:CDS |
| CCGAGCAACTGATGAAAATG+AGG | 0.584472 | 7.4:+23264231 | MS.gene024268:CDS |
| ACACGTTGAGGGGCCCACCT+CGG | 0.589888 | 7.4:-23262886 | None:intergenic |
| TTGACGAATCGCCTTCCCAA+GGG | 0.597934 | 7.4:+23264976 | MS.gene024268:CDS |
| TGTGTTAGATCTCCCGAGGT+GGG | 0.598071 | 7.4:+23262873 | MS.gene024268:CDS |
| GATTCCTTTCTATGGAACCC+TGG | 0.600275 | 7.4:+23251732 | MS.gene024268:CDS |
| TCTTCAACCAAATTCTCTAG+TGG | 0.600763 | 7.4:+23255215 | MS.gene024268:CDS |
| CAAGTTCAGCCCCACCCCAT+GGG | 0.600881 | 7.4:-23255350 | None:intergenic |
| AGCTGCCACAACAGTAGATG+AGG | 0.602450 | 7.4:+23255263 | MS.gene024268:CDS |
| TTTGACGAATCGCCTTCCCA+AGG | 0.604762 | 7.4:+23264975 | MS.gene024268:CDS |
| ATTGCTCAGCACATGTGAGA+AGG | 0.605290 | 7.4:-23251699 | None:intergenic |
| CAACGACATGGTTAAAGGGA+AGG | 0.605497 | 7.4:+23263293 | MS.gene024268:CDS |
| ATGTAGGTGAAAAGGAACAA+TGG | 0.607240 | 7.4:+23265265 | MS.gene024268:CDS |
| TAGAGCATTGAAAATGCACC+TGG | 0.608405 | 7.4:+23263174 | MS.gene024268:intron |
| AGCTGAAGTAGCTGCCAATG+AGG | 0.609407 | 7.4:+23264039 | MS.gene024268:CDS |
| GGGTGGGGCTGAACTTGTTG+AGG | 0.611562 | 7.4:+23255356 | MS.gene024268:CDS |
| TGAGGACTTTGTGAAAAGAC+TGG | 0.611792 | 7.4:+23252833 | MS.gene024268:CDS |
| GTCTGGACAGCTCAACGACA+TGG | 0.612833 | 7.4:+23263281 | MS.gene024268:CDS |
| GCTTACTGTCCCAAATGCAT+GGG | 0.612852 | 7.4:-23257188 | None:intergenic |
| GCTAGATTAAGTACCTCCCA+TGG | 0.614863 | 7.4:-23263666 | None:intergenic |
| TGCCAATGAGGCAAAAGCAG+AGG | 0.615316 | 7.4:+23264051 | MS.gene024268:CDS |
| CAAACCAGCGTATTACACAC+TGG | 0.616115 | 7.4:+23261154 | MS.gene024268:CDS |
| GTTCAGCCCCACCCCATGGG+AGG | 0.616296 | 7.4:-23255347 | None:intergenic |
| GCTGGTTTGAAAGGTGGCTG+TGG | 0.616812 | 7.4:-23261140 | None:intergenic |
| GGAAGCAATTCTTCTAAACC+AGG | 0.617258 | 7.4:-23263192 | None:intergenic |
| TGTCGCCGATCCGTAGAATG+AGG | 0.619482 | 7.4:-23250521 | None:intergenic |
| GAATTGCTTCCTCCGAAGGG+TGG | 0.620658 | 7.4:+23263204 | MS.gene024268:CDS |
| ATAACCAGTGTGTAATACGC+TGG | 0.626518 | 7.4:-23261158 | None:intergenic |
| TCCTGAACAAAGACACGTTG+AGG | 0.626849 | 7.4:-23262898 | None:intergenic |
| AAATTCGGTCCACCCTTCGG+AGG | 0.630320 | 7.4:-23263213 | None:intergenic |
| GATATTGAGAGAGTAATGGT+TGG | 0.632531 | 7.4:+23255512 | MS.gene024268:CDS |
| TCAAAACTAGCACTTGTGGA+TGG | 0.635198 | 7.4:+23264088 | MS.gene024268:CDS |
| TCTACAGTCAGTCAAATGGT+GGG | 0.636123 | 7.4:+23265223 | MS.gene024268:intron |
| AGTGGTCGAGCTCACGACGA+AGG | 0.636523 | 7.4:-23250694 | None:intergenic |
| AGAAGCCTCATTCTACGGAT+CGG | 0.636714 | 7.4:+23250516 | MS.gene024268:CDS |
| ACATAAGCCCACTCTTCCCA+AGG | 0.642323 | 7.4:-23262853 | None:intergenic |
| TTCTAGGCAGTACGCTACTG+AGG | 0.642555 | 7.4:+23265320 | MS.gene024268:CDS |
| TTCATGCAAAGCTAGTCGAA+AGG | 0.642569 | 7.4:+23258468 | MS.gene024268:intron |
| TCATACAACAGATCGTCCAT+GGG | 0.646415 | 7.4:+23263650 | MS.gene024268:CDS |
| TAGCTCCAGATCCCTTGGGA+AGG | 0.649924 | 7.4:-23264987 | None:intergenic |
| CATGAGGTACTCATATCGGA+AGG | 0.657242 | 7.4:-23258524 | None:intergenic |
| TTATTGGGGAAAACCCTGCA+AGG | 0.661602 | 7.4:+23264119 | MS.gene024268:CDS |
| TTACCAAAAGATACCCCAGA+AGG | 0.662578 | 7.4:-23257241 | None:intergenic |
| CCATAGAAAGGAATCTTGTG+AGG | 0.662629 | 7.4:-23251724 | None:intergenic |
| TACAACAGATCGTCCATGGG+AGG | 0.664252 | 7.4:+23263653 | MS.gene024268:CDS |
| ATTTCCATCCAGTAAAATGG+AGG | 0.665342 | 7.4:+23257318 | MS.gene024268:CDS |
| CTTATGTGTTAGATCTCCCG+AGG | 0.668646 | 7.4:+23262869 | MS.gene024268:CDS |
| TAATACGCTGGTTTGAAAGG+TGG | 0.671260 | 7.4:-23261146 | None:intergenic |
| CTGAACAAAGACACGTTGAG+GGG | 0.677463 | 7.4:-23262896 | None:intergenic |
| GACTAGAAAGTACCTTACAA+AGG | 0.683156 | 7.4:-23261187 | None:intergenic |
| GGATGGTGAACCAGTTATTG+GGG | 0.686077 | 7.4:+23264105 | MS.gene024268:CDS |
| GGATGCAGAAGTACTAACAG+AGG | 0.695226 | 7.4:+23265648 | MS.gene024268:CDS |
| AATATGATCTTTGAAGTCGG+AGG | 0.698021 | 7.4:-23250565 | None:intergenic |
| AGAATATTGTCTCAGCCATG+AGG | 0.700331 | 7.4:-23258540 | None:intergenic |
| GGACTTTGTGAAAAGACTGG+TGG | 0.703361 | 7.4:+23252836 | MS.gene024268:CDS |
| GTTATGTAAAAGTCAGCACA+TGG | 0.708008 | 7.4:-23255309 | None:intergenic |
| AGAGTCAAAACTAGCACTTG+TGG | 0.709196 | 7.4:+23264084 | MS.gene024268:CDS |
| AGTATCCTCAAAGAATACGG+CGG | 0.717953 | 7.4:+23257287 | MS.gene024268:CDS |
| TCTTCGAAGACCAATTAACG+AGG | 0.718077 | 7.4:+23265708 | MS.gene024268:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 23250504 | 23265735 | 23250504 | ID=MS.gene024268 |
| chr7.4 | mRNA | 23250504 | 23265735 | 23250504 | ID=MS.gene024268.t1;Parent=MS.gene024268 |
| chr7.4 | exon | 23250504 | 23250587 | 23250504 | ID=MS.gene024268.t1.exon1;Parent=MS.gene024268.t1 |
| chr7.4 | CDS | 23250504 | 23250587 | 23250504 | ID=cds.MS.gene024268.t1;Parent=MS.gene024268.t1 |
| chr7.4 | exon | 23250677 | 23250736 | 23250677 | ID=MS.gene024268.t1.exon2;Parent=MS.gene024268.t1 |
| chr7.4 | CDS | 23250677 | 23250736 | 23250677 | ID=cds.MS.gene024268.t1;Parent=MS.gene024268.t1 |
| chr7.4 | exon | 23251697 | 23251753 | 23251697 | ID=MS.gene024268.t1.exon3;Parent=MS.gene024268.t1 |
| chr7.4 | CDS | 23251697 | 23251753 | 23251697 | ID=cds.MS.gene024268.t1;Parent=MS.gene024268.t1 |
| chr7.4 | exon | 23252810 | 23252881 | 23252810 | ID=MS.gene024268.t1.exon4;Parent=MS.gene024268.t1 |
| chr7.4 | CDS | 23252810 | 23252881 | 23252810 | ID=cds.MS.gene024268.t1;Parent=MS.gene024268.t1 |
| chr7.4 | exon | 23254717 | 23254779 | 23254717 | ID=MS.gene024268.t1.exon5;Parent=MS.gene024268.t1 |
| chr7.4 | CDS | 23254717 | 23254779 | 23254717 | ID=cds.MS.gene024268.t1;Parent=MS.gene024268.t1 |
| chr7.4 | exon | 23255201 | 23255377 | 23255201 | ID=MS.gene024268.t1.exon6;Parent=MS.gene024268.t1 |
| chr7.4 | CDS | 23255201 | 23255377 | 23255201 | ID=cds.MS.gene024268.t1;Parent=MS.gene024268.t1 |
| chr7.4 | exon | 23255500 | 23255631 | 23255500 | ID=MS.gene024268.t1.exon7;Parent=MS.gene024268.t1 |
| chr7.4 | CDS | 23255500 | 23255631 | 23255500 | ID=cds.MS.gene024268.t1;Parent=MS.gene024268.t1 |
| chr7.4 | exon | 23256783 | 23256849 | 23256783 | ID=MS.gene024268.t1.exon8;Parent=MS.gene024268.t1 |
| chr7.4 | CDS | 23256783 | 23256849 | 23256783 | ID=cds.MS.gene024268.t1;Parent=MS.gene024268.t1 |
| chr7.4 | exon | 23257140 | 23257339 | 23257140 | ID=MS.gene024268.t1.exon9;Parent=MS.gene024268.t1 |
| chr7.4 | CDS | 23257140 | 23257339 | 23257140 | ID=cds.MS.gene024268.t1;Parent=MS.gene024268.t1 |
| chr7.4 | exon | 23258083 | 23258153 | 23258083 | ID=MS.gene024268.t1.exon10;Parent=MS.gene024268.t1 |
| chr7.4 | CDS | 23258083 | 23258153 | 23258083 | ID=cds.MS.gene024268.t1;Parent=MS.gene024268.t1 |
| chr7.4 | exon | 23258483 | 23258567 | 23258483 | ID=MS.gene024268.t1.exon11;Parent=MS.gene024268.t1 |
| chr7.4 | CDS | 23258483 | 23258567 | 23258483 | ID=cds.MS.gene024268.t1;Parent=MS.gene024268.t1 |
| chr7.4 | exon | 23261128 | 23261196 | 23261128 | ID=MS.gene024268.t1.exon12;Parent=MS.gene024268.t1 |
| chr7.4 | CDS | 23261128 | 23261196 | 23261128 | ID=cds.MS.gene024268.t1;Parent=MS.gene024268.t1 |
| chr7.4 | exon | 23261377 | 23261495 | 23261377 | ID=MS.gene024268.t1.exon13;Parent=MS.gene024268.t1 |
| chr7.4 | CDS | 23261377 | 23261495 | 23261377 | ID=cds.MS.gene024268.t1;Parent=MS.gene024268.t1 |
| chr7.4 | exon | 23262831 | 23262969 | 23262831 | ID=MS.gene024268.t1.exon14;Parent=MS.gene024268.t1 |
| chr7.4 | CDS | 23262831 | 23262969 | 23262831 | ID=cds.MS.gene024268.t1;Parent=MS.gene024268.t1 |
| chr7.4 | exon | 23263177 | 23263674 | 23263177 | ID=MS.gene024268.t1.exon15;Parent=MS.gene024268.t1 |
| chr7.4 | CDS | 23263177 | 23263674 | 23263177 | ID=cds.MS.gene024268.t1;Parent=MS.gene024268.t1 |
| chr7.4 | exon | 23263953 | 23264252 | 23263953 | ID=MS.gene024268.t1.exon16;Parent=MS.gene024268.t1 |
| chr7.4 | CDS | 23263953 | 23264252 | 23263953 | ID=cds.MS.gene024268.t1;Parent=MS.gene024268.t1 |
| chr7.4 | exon | 23264937 | 23265115 | 23264937 | ID=MS.gene024268.t1.exon17;Parent=MS.gene024268.t1 |
| chr7.4 | CDS | 23264937 | 23265115 | 23264937 | ID=cds.MS.gene024268.t1;Parent=MS.gene024268.t1 |
| chr7.4 | exon | 23265230 | 23265341 | 23265230 | ID=MS.gene024268.t1.exon18;Parent=MS.gene024268.t1 |
| chr7.4 | CDS | 23265230 | 23265341 | 23265230 | ID=cds.MS.gene024268.t1;Parent=MS.gene024268.t1 |
| chr7.4 | exon | 23265625 | 23265735 | 23265625 | ID=MS.gene024268.t1.exon19;Parent=MS.gene024268.t1 |
| chr7.4 | CDS | 23265625 | 23265735 | 23265625 | ID=cds.MS.gene024268.t1;Parent=MS.gene024268.t1 |
| Gene Sequence |
| Protein sequence |
