Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024336.t1 | XP_003624554.2 | 99.1 | 352 | 3 | 0 | 1 | 352 | 1 | 352 | 1.80E-202 | 714.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024336.t1 | Q9LPV9 | 90.9 | 352 | 26 | 1 | 1 | 352 | 1 | 346 | 6.3e-188 | 657.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024336.t1 | G7KYC1 | 99.1 | 352 | 3 | 0 | 1 | 352 | 1 | 352 | 1.3e-202 | 714.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene057254 | MS.gene024336 | PPI |
| MS.gene013494 | MS.gene024336 | PPI |
| MS.gene024336 | MS.gene06812 | PPI |
| MS.gene06600 | MS.gene024336 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024336.t1 | MTR_7g084810 | 99.148 | 352 | 3 | 0 | 1 | 352 | 1 | 352 | 0.0 | 720 |
| MS.gene024336.t1 | MTR_3g092840 | 61.493 | 335 | 114 | 5 | 23 | 352 | 18 | 342 | 8.33e-150 | 426 |
| MS.gene024336.t1 | MTR_3g092830 | 55.319 | 94 | 40 | 1 | 259 | 352 | 1 | 92 | 4.90e-32 | 115 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024336.t1 | AT1G12910 | 91.477 | 352 | 24 | 2 | 1 | 352 | 1 | 346 | 0.0 | 664 |
| MS.gene024336.t1 | AT3G26640 | 86.080 | 352 | 43 | 2 | 1 | 352 | 1 | 346 | 0.0 | 624 |
| MS.gene024336.t1 | AT5G24520 | 62.069 | 348 | 118 | 6 | 10 | 352 | 3 | 341 | 1.01e-155 | 441 |
| MS.gene024336.t1 | AT5G24520 | 62.069 | 348 | 118 | 6 | 10 | 352 | 3 | 341 | 1.01e-155 | 441 |
| MS.gene024336.t1 | AT5G24520 | 62.069 | 348 | 118 | 6 | 10 | 352 | 3 | 341 | 1.01e-155 | 441 |
| MS.gene024336.t1 | AT5G24520 | 62.069 | 348 | 118 | 6 | 10 | 352 | 3 | 341 | 1.01e-155 | 441 |
| MS.gene024336.t1 | AT1G18830 | 24.859 | 177 | 114 | 4 | 138 | 302 | 112 | 281 | 2.56e-11 | 65.5 |
| MS.gene024336.t1 | AT1G18830 | 24.859 | 177 | 114 | 4 | 138 | 302 | 112 | 281 | 2.56e-11 | 65.5 |
| MS.gene024336.t1 | AT1G18830 | 24.859 | 177 | 114 | 4 | 138 | 302 | 112 | 281 | 2.59e-11 | 65.5 |
| MS.gene024336.t1 | AT4G35050 | 24.444 | 225 | 142 | 10 | 149 | 352 | 177 | 394 | 5.82e-11 | 63.9 |
Find 101 sgRNAs with CRISPR-Local
Find 111 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGACTAAGCTTCAGATTCTT+AGG | 0.130906 | 7.2:+22871687 | MS.gene024336:CDS |
| TTCCAATCAAAAGAAGTAAT+TGG | 0.178566 | 7.2:-22871083 | None:intergenic |
| CCTCCGATTTCCTCCGTATT+TGG | 0.189798 | 7.2:+22870967 | MS.gene024336:CDS |
| AGGTGGGCTTGATCCTATTT+TGG | 0.218068 | 7.2:+22871589 | MS.gene024336:CDS |
| TTCAGAACTTTCGTAAATTA+TGG | 0.245041 | 7.2:-22871312 | None:intergenic |
| TGAACGATTTCGACGCGGTT+AGG | 0.301990 | 7.2:-22870819 | None:intergenic |
| GATTTGGGATCTTTCTTCAA+TGG | 0.308847 | 7.2:+22871553 | MS.gene024336:CDS |
| TTTCTGCTGATGGGTCTGTT+AGG | 0.312772 | 7.2:+22871258 | MS.gene024336:CDS |
| GGGCGTTGGCAGTCTTTGTC+AGG | 0.322893 | 7.2:-22870927 | None:intergenic |
| ATGATTCTCAGGCGTTGATT+TGG | 0.327910 | 7.2:+22871537 | MS.gene024336:CDS |
| GAGGAGGTGGCGAGGAGGTC+GGG | 0.337769 | 7.2:-22870948 | None:intergenic |
| GTCTTCTTCTCAGCCTGATT+GGG | 0.338432 | 7.2:+22871649 | MS.gene024336:CDS |
| GGTCTTCTTCTCAGCCTGAT+TGG | 0.338481 | 7.2:+22871648 | MS.gene024336:CDS |
| TGATTCTCAGGCGTTGATTT+GGG | 0.344030 | 7.2:+22871538 | MS.gene024336:CDS |
| TAAACAAGATCCTAGGTATA+TGG | 0.347324 | 7.2:+22871367 | MS.gene024336:CDS |
| ATTTGGGATCTTTCTTCAAT+GGG | 0.351970 | 7.2:+22871554 | MS.gene024336:CDS |
| AGCCTAACCAACGGTGTATC+AGG | 0.360847 | 7.2:-22871335 | None:intergenic |
| CCAGCAGTATAAGCCAAAAT+AGG | 0.361162 | 7.2:-22871602 | None:intergenic |
| GTATATGGCAACGATTATAA+TGG | 0.363636 | 7.2:+22871382 | MS.gene024336:CDS |
| GGATGTTCGAAGGAGAGATT+TGG | 0.364624 | 7.2:-22870876 | None:intergenic |
| ATGGATTTGGTGGGTGGGTA+AGG | 0.374091 | 7.2:-22870897 | None:intergenic |
| GTTGCTCGTCGGAAGTGTCT+TGG | 0.374416 | 7.2:-22870680 | None:intergenic |
| CGACACAACGTGTACCATTT+GGG | 0.395220 | 7.2:+22871142 | MS.gene024336:CDS |
| TCGACACAACGTGTACCATT+TGG | 0.395312 | 7.2:+22871141 | MS.gene024336:CDS |
| GTCAGGGATGAAGATGGATT+TGG | 0.401641 | 7.2:-22870910 | None:intergenic |
| AGGAGGTGGCGAGGAGGTCG+GGG | 0.406903 | 7.2:-22870947 | None:intergenic |
| AAGAGGTTTATGATATAGCT+TGG | 0.407143 | 7.2:+22871210 | MS.gene024336:CDS |
| AGAGGTTTATGATATAGCTT+GGG | 0.414776 | 7.2:+22871211 | MS.gene024336:CDS |
| TTCTGCTGATGGGTCTGTTA+GGG | 0.416523 | 7.2:+22871259 | MS.gene024336:CDS |
| TCAATGGGGCAGCCTGTTGA+AGG | 0.416805 | 7.2:+22871569 | MS.gene024336:CDS |
| TTTGCGTCGGTTTCTGCTGA+TGG | 0.417377 | 7.2:+22871248 | MS.gene024336:CDS |
| CCGCCAAATACGGAGGAAAT+CGG | 0.418339 | 7.2:-22870970 | None:intergenic |
| GAACGATTTCGACGCGGTTA+GGG | 0.418818 | 7.2:-22870818 | None:intergenic |
| CACTGCTGGTGATGATTCTC+AGG | 0.422046 | 7.2:+22871526 | MS.gene024336:CDS |
| TCCAATCAAAAGAAGTAATT+GGG | 0.422669 | 7.2:-22871082 | None:intergenic |
| TTCTTTCTCAATATCCCAAA+TGG | 0.431809 | 7.2:-22871156 | None:intergenic |
| CGTCGGAAGTGTCTTGGGTT+GGG | 0.435334 | 7.2:-22870674 | None:intergenic |
| CTGAGATTGAACAGCTTCAA+TGG | 0.437364 | 7.2:+22871627 | MS.gene024336:CDS |
| TGGCGAGGAGGTCGGGGCGT+TGG | 0.442078 | 7.2:-22870941 | None:intergenic |
| GACTAAGCTTCAGATTCTTA+GGG | 0.451874 | 7.2:+22871688 | MS.gene024336:CDS |
| AAAGCAATAGCAACCCAATC+AGG | 0.452793 | 7.2:-22871662 | None:intergenic |
| CGCAATTAACTGCGTATCAA+CGG | 0.454016 | 7.2:-22871180 | None:intergenic |
| ATGGGGCAGCCTGTTGAAGG+TGG | 0.459832 | 7.2:+22871572 | MS.gene024336:CDS |
| CGACGCTGATTCGTCGGAAT+CGG | 0.459940 | 7.2:-22870997 | None:intergenic |
| TTGCTCGTCGGAAGTGTCTT+GGG | 0.460024 | 7.2:-22870679 | None:intergenic |
| GATATAGCTTGGGGTGGTGT+TGG | 0.461083 | 7.2:+22871221 | MS.gene024336:CDS |
| TTGCGTCGGTTTCTGCTGAT+GGG | 0.464907 | 7.2:+22871249 | MS.gene024336:CDS |
| TCGTCGGAAGTGTCTTGGGT+TGG | 0.465598 | 7.2:-22870675 | None:intergenic |
| GGATCAAGCCCACCTTCAAC+AGG | 0.465837 | 7.2:-22871581 | None:intergenic |
| GAAGCTGAACCACGTCGAAT+CGG | 0.471288 | 7.2:+22871107 | MS.gene024336:CDS |
| GGCACATCTACGCTATGAAC+TGG | 0.475900 | 7.2:+22870739 | MS.gene024336:CDS |
| GTTAATTGCGCATGATAAAG+AGG | 0.479182 | 7.2:+22871193 | MS.gene024336:CDS |
| CCGATTTCCTCCGTATTTGG+CGG | 0.480379 | 7.2:+22870970 | MS.gene024336:CDS |
| GATGTTCGAAGGAGAGATTT+GGG | 0.482799 | 7.2:-22870875 | None:intergenic |
| AATCGGAGATCCGCCAAATA+CGG | 0.485839 | 7.2:-22870980 | None:intergenic |
| GTCTTTGTCAGGGATGAAGA+TGG | 0.492695 | 7.2:-22870916 | None:intergenic |
| CACCGTTGGTTAGGCTAGGT+TGG | 0.498966 | 7.2:+22871342 | MS.gene024336:CDS |
| ACTATGCGGCGCCCACGCTA+TGG | 0.499007 | 7.2:-22871489 | None:intergenic |
| AGGGATGAAGATGGATTTGG+TGG | 0.499516 | 7.2:-22870907 | None:intergenic |
| TCGTGTCATATTTGCACTGC+TGG | 0.500103 | 7.2:+22871512 | MS.gene024336:CDS |
| GGAGGAGGTGGCGAGGAGGT+CGG | 0.504036 | 7.2:-22870949 | None:intergenic |
| GTTGGAATAAACAAGATCCT+AGG | 0.507846 | 7.2:+22871360 | MS.gene024336:CDS |
| ACGGAGGAAATCGGAGGAGG+TGG | 0.513893 | 7.2:-22870961 | None:intergenic |
| GGCGTTGGCAGTCTTTGTCA+GGG | 0.522445 | 7.2:-22870926 | None:intergenic |
| GATTATAATGGATTCTGCTA+AGG | 0.524815 | 7.2:+22871394 | MS.gene024336:CDS |
| ATGAAGATGGATTTGGTGGG+TGG | 0.531828 | 7.2:-22870903 | None:intergenic |
| TGGGGCAGCCTGTTGAAGGT+GGG | 0.536184 | 7.2:+22871573 | MS.gene024336:CDS |
| GAACTCAAAAGTCTTCTCAA+TGG | 0.538802 | 7.2:+22871035 | MS.gene024336:CDS |
| TTCGAAGGAGAGATTTGGGT+CGG | 0.542384 | 7.2:-22870871 | None:intergenic |
| AACCTGATACACCGTTGGTT+AGG | 0.543600 | 7.2:+22871333 | MS.gene024336:CDS |
| GGAAATCGGAGGAGGTGGCG+AGG | 0.553341 | 7.2:-22870956 | None:intergenic |
| CTAAGAGAGAAGCGATAGCG+AGG | 0.568922 | 7.2:-22870788 | None:intergenic |
| AACTCCACCACCGGTAGCGT+TGG | 0.572521 | 7.2:-22871440 | None:intergenic |
| GTCGGATTTGATTTCGCCGG+TGG | 0.588124 | 7.2:-22870853 | None:intergenic |
| TGTCTCTGCAACTCCACCAC+CGG | 0.590157 | 7.2:-22871449 | None:intergenic |
| TGAAGATGGATTTGGTGGGT+GGG | 0.592001 | 7.2:-22870902 | None:intergenic |
| TTCTGAACCTGATACACCGT+TGG | 0.592173 | 7.2:+22871328 | MS.gene024336:CDS |
| AATACGGAGGAAATCGGAGG+AGG | 0.595705 | 7.2:-22870964 | None:intergenic |
| TGGGTCGGATTTGATTTCGC+CGG | 0.599155 | 7.2:-22870856 | None:intergenic |
| AGACTCCGACGCTGATTCGT+CGG | 0.602656 | 7.2:-22871003 | None:intergenic |
| CGGAGATCCGCCAAATACGG+AGG | 0.602926 | 7.2:-22870977 | None:intergenic |
| TTCATAGCGTAGATGTGCCA+TGG | 0.606486 | 7.2:-22870735 | None:intergenic |
| TAGTGTGAATGCCATAGCGT+GGG | 0.611881 | 7.2:+22871478 | MS.gene024336:CDS |
| GATACACCGTTGGTTAGGCT+AGG | 0.616430 | 7.2:+22871338 | MS.gene024336:CDS |
| ATAATCGTTGCCATATACCT+AGG | 0.620729 | 7.2:-22871377 | None:intergenic |
| GAATCAGCGTCGGAGTCTCG+TGG | 0.628287 | 7.2:+22871008 | MS.gene024336:CDS |
| AATCGGAGGAGGTGGCGAGG+AGG | 0.630478 | 7.2:-22870953 | None:intergenic |
| GTTTATGATATAGCTTGGGG+TGG | 0.631893 | 7.2:+22871215 | MS.gene024336:CDS |
| TTCCAACCTAGCCTAACCAA+CGG | 0.643891 | 7.2:-22871344 | None:intergenic |
| GGGATGAAGATGGATTTGGT+GGG | 0.648292 | 7.2:-22870906 | None:intergenic |
| CGATTCCGACGAATCAGCGT+CGG | 0.649196 | 7.2:+22870998 | MS.gene024336:CDS |
| TTTGGGATCTTTCTTCAATG+GGG | 0.652017 | 7.2:+22871555 | MS.gene024336:CDS |
| GTTCAGCTTGATGACACCAC+CGG | 0.655354 | 7.2:+22870837 | MS.gene024336:CDS |
| GGGTGGGTAAGGATGTTCGA+AGG | 0.657390 | 7.2:-22870886 | None:intergenic |
| CTAGTGTGAATGCCATAGCG+TGG | 0.659753 | 7.2:+22871477 | MS.gene024336:CDS |
| CAAATATGACACGAACTATG+CGG | 0.670679 | 7.2:-22871503 | None:intergenic |
| GAGGTTTATGATATAGCTTG+GGG | 0.671285 | 7.2:+22871212 | MS.gene024336:CDS |
| CTCGAAGTACCGATTCGACG+TGG | 0.693978 | 7.2:-22871116 | None:intergenic |
| TCTACACTTACGAAGCACCA+TGG | 0.695382 | 7.2:+22870718 | MS.gene024336:CDS |
| CCAAATACGGAGGAAATCGG+AGG | 0.698544 | 7.2:-22870967 | None:intergenic |
| CAAGCTGAACGATTTCGACG+CGG | 0.729457 | 7.2:-22870824 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AATAAAAACAGTGAATACTG+TGG | + | chr7.2:22871059-22871078 | MS.gene024336:CDS | 25.0% |
| ! | TCCAATCAAAAGAAGTAATT+GGG | - | chr7.2:22871085-22871104 | None:intergenic | 25.0% |
| ! | TTCAGAACTTTCGTAAATTA+TGG | - | chr7.2:22871315-22871334 | None:intergenic | 25.0% |
| ! | TTCCAATCAAAAGAAGTAAT+TGG | - | chr7.2:22871086-22871105 | None:intergenic | 25.0% |
| AAGAGGTTTATGATATAGCT+TGG | + | chr7.2:22871210-22871229 | MS.gene024336:CDS | 30.0% | |
| AGAGGTTTATGATATAGCTT+GGG | + | chr7.2:22871211-22871230 | MS.gene024336:CDS | 30.0% | |
| GTATATGGCAACGATTATAA+TGG | + | chr7.2:22871382-22871401 | MS.gene024336:CDS | 30.0% | |
| TAAACAAGATCCTAGGTATA+TGG | + | chr7.2:22871367-22871386 | MS.gene024336:CDS | 30.0% | |
| TTCTTTCTCAATATCCCAAA+TGG | - | chr7.2:22871159-22871178 | None:intergenic | 30.0% | |
| ! | ATTTGGGATCTTTCTTCAAT+GGG | + | chr7.2:22871554-22871573 | MS.gene024336:CDS | 30.0% |
| !! | GATTATAATGGATTCTGCTA+AGG | + | chr7.2:22871394-22871413 | MS.gene024336:CDS | 30.0% |
| ATAATCGTTGCCATATACCT+AGG | - | chr7.2:22871380-22871399 | None:intergenic | 35.0% | |
| CAAATATGACACGAACTATG+CGG | - | chr7.2:22871506-22871525 | None:intergenic | 35.0% | |
| GAACTCAAAAGTCTTCTCAA+TGG | + | chr7.2:22871035-22871054 | MS.gene024336:CDS | 35.0% | |
| GACTAAGCTTCAGATTCTTA+GGG | + | chr7.2:22871688-22871707 | MS.gene024336:CDS | 35.0% | |
| GAGGTTTATGATATAGCTTG+GGG | + | chr7.2:22871212-22871231 | MS.gene024336:CDS | 35.0% | |
| GTTAATTGCGCATGATAAAG+AGG | + | chr7.2:22871193-22871212 | MS.gene024336:CDS | 35.0% | |
| GTTGGAATAAACAAGATCCT+AGG | + | chr7.2:22871360-22871379 | MS.gene024336:CDS | 35.0% | |
| ! | GATTTGGGATCTTTCTTCAA+TGG | + | chr7.2:22871553-22871572 | MS.gene024336:CDS | 35.0% |
| ! | GCCCAATTACTTCTTTTGAT+TGG | + | chr7.2:22871081-22871100 | MS.gene024336:CDS | 35.0% |
| ! | TTTGGGATCTTTCTTCAATG+GGG | + | chr7.2:22871555-22871574 | MS.gene024336:CDS | 35.0% |
| AAAGCAATAGCAACCCAATC+AGG | - | chr7.2:22871665-22871684 | None:intergenic | 40.0% | |
| CCAGCAGTATAAGCCAAAAT+AGG | - | chr7.2:22871605-22871624 | None:intergenic | 40.0% | |
| CGACTAAGCTTCAGATTCTT+AGG | + | chr7.2:22871687-22871706 | MS.gene024336:CDS | 40.0% | |
| CGCAATTAACTGCGTATCAA+CGG | - | chr7.2:22871183-22871202 | None:intergenic | 40.0% | |
| CTGAGATTGAACAGCTTCAA+TGG | + | chr7.2:22871627-22871646 | MS.gene024336:CDS | 40.0% | |
| GATGTTCGAAGGAGAGATTT+GGG | - | chr7.2:22870878-22870897 | None:intergenic | 40.0% | |
| GTTTATGATATAGCTTGGGG+TGG | + | chr7.2:22871215-22871234 | MS.gene024336:CDS | 40.0% | |
| ! | TATTCGTTTTCCAACGCTAC+CGG | + | chr7.2:22871430-22871449 | MS.gene024336:CDS | 40.0% |
| !! | ATGATTCTCAGGCGTTGATT+TGG | + | chr7.2:22871537-22871556 | MS.gene024336:CDS | 40.0% |
| !! | TGATTCTCAGGCGTTGATTT+GGG | + | chr7.2:22871538-22871557 | MS.gene024336:CDS | 40.0% |
| !!! | CCTATTTTGGCTTATACTGC+TGG | + | chr7.2:22871602-22871621 | MS.gene024336:CDS | 40.0% |
| AATCGGAGATCCGCCAAATA+CGG | - | chr7.2:22870983-22871002 | None:intergenic | 45.0% | |
| CGACACAACGTGTACCATTT+GGG | + | chr7.2:22871142-22871161 | MS.gene024336:CDS | 45.0% | |
| CGACGAGCAACAAAAACGTT+CGG | + | chr7.2:22870692-22870711 | MS.gene024336:CDS | 45.0% | |
| GGATGTTCGAAGGAGAGATT+TGG | - | chr7.2:22870879-22870898 | None:intergenic | 45.0% | |
| GTCTTCTTCTCAGCCTGATT+GGG | + | chr7.2:22871649-22871668 | MS.gene024336:CDS | 45.0% | |
| GTCTTTGTCAGGGATGAAGA+TGG | - | chr7.2:22870919-22870938 | None:intergenic | 45.0% | |
| TAGTGTGAATGCCATAGCGT+GGG | + | chr7.2:22871478-22871497 | MS.gene024336:CDS | 45.0% | |
| TCGACACAACGTGTACCATT+TGG | + | chr7.2:22871141-22871160 | MS.gene024336:CDS | 45.0% | |
| TCGTGTCATATTTGCACTGC+TGG | + | chr7.2:22871512-22871531 | MS.gene024336:CDS | 45.0% | |
| TTCATAGCGTAGATGTGCCA+TGG | - | chr7.2:22870738-22870757 | None:intergenic | 45.0% | |
| TTCCAACCTAGCCTAACCAA+CGG | - | chr7.2:22871347-22871366 | None:intergenic | 45.0% | |
| TTCGAAGGAGAGATTTGGGT+CGG | - | chr7.2:22870874-22870893 | None:intergenic | 45.0% | |
| TTCTGAACCTGATACACCGT+TGG | + | chr7.2:22871328-22871347 | MS.gene024336:CDS | 45.0% | |
| ! | AACCTGATACACCGTTGGTT+AGG | + | chr7.2:22871333-22871352 | MS.gene024336:CDS | 45.0% |
| ! | AGGGATGAAGATGGATTTGG+TGG | - | chr7.2:22870910-22870929 | None:intergenic | 45.0% |
| ! | CGAACGTTTTTGTTGCTCGT+CGG | - | chr7.2:22870694-22870713 | None:intergenic | 45.0% |
| ! | GGGATGAAGATGGATTTGGT+GGG | - | chr7.2:22870909-22870928 | None:intergenic | 45.0% |
| ! | GTCAGGGATGAAGATGGATT+TGG | - | chr7.2:22870913-22870932 | None:intergenic | 45.0% |
| ! | TCTACACTTACGAAGCACCA+TGG | + | chr7.2:22870718-22870737 | MS.gene024336:CDS | 45.0% |
| ! | TTCTGCTGATGGGTCTGTTA+GGG | + | chr7.2:22871259-22871278 | MS.gene024336:CDS | 45.0% |
| ! | TTTCTGCTGATGGGTCTGTT+AGG | + | chr7.2:22871258-22871277 | MS.gene024336:CDS | 45.0% |
| !! | AGGTGGGCTTGATCCTATTT+TGG | + | chr7.2:22871589-22871608 | MS.gene024336:CDS | 45.0% |
| !! | ATGAAGATGGATTTGGTGGG+TGG | - | chr7.2:22870906-22870925 | None:intergenic | 45.0% |
| !! | TGAAGATGGATTTGGTGGGT+GGG | - | chr7.2:22870905-22870924 | None:intergenic | 45.0% |
| !!! | GGCGATATTTTTTGTCGCGA+CGG | - | chr7.2:22870770-22870789 | None:intergenic | 45.0% |
| !!! | TGGTGTTGGTGTTTTTGCGT+CGG | + | chr7.2:22871235-22871254 | MS.gene024336:CDS | 45.0% |
| AATACGGAGGAAATCGGAGG+AGG | - | chr7.2:22870967-22870986 | None:intergenic | 50.0% | |
| AGCCTAACCAACGGTGTATC+AGG | - | chr7.2:22871338-22871357 | None:intergenic | 50.0% | |
| CAAGCTGAACGATTTCGACG+CGG | - | chr7.2:22870827-22870846 | None:intergenic | 50.0% | |
| CCAAATACGGAGGAAATCGG+AGG | - | chr7.2:22870970-22870989 | None:intergenic | 50.0% | |
| CCGATTTCCTCCGTATTTGG+CGG | + | chr7.2:22870970-22870989 | MS.gene024336:CDS | 50.0% | |
| CCGCCAAATACGGAGGAAAT+CGG | - | chr7.2:22870973-22870992 | None:intergenic | 50.0% | |
| CCTCCGATTTCCTCCGTATT+TGG | + | chr7.2:22870967-22870986 | MS.gene024336:CDS | 50.0% | |
| CTAAGAGAGAAGCGATAGCG+AGG | - | chr7.2:22870791-22870810 | None:intergenic | 50.0% | |
| CTAGTGTGAATGCCATAGCG+TGG | + | chr7.2:22871477-22871496 | MS.gene024336:CDS | 50.0% | |
| GAACGATTTCGACGCGGTTA+GGG | - | chr7.2:22870821-22870840 | None:intergenic | 50.0% | |
| GAAGCTGAACCACGTCGAAT+CGG | + | chr7.2:22871107-22871126 | MS.gene024336:CDS | 50.0% | |
| GATATAGCTTGGGGTGGTGT+TGG | + | chr7.2:22871221-22871240 | MS.gene024336:CDS | 50.0% | |
| GGCACATCTACGCTATGAAC+TGG | + | chr7.2:22870739-22870758 | MS.gene024336:CDS | 50.0% | |
| GGTCTTCTTCTCAGCCTGAT+TGG | + | chr7.2:22871648-22871667 | MS.gene024336:CDS | 50.0% | |
| TGAACGATTTCGACGCGGTT+AGG | - | chr7.2:22870822-22870841 | None:intergenic | 50.0% | |
| ! | CACTGCTGGTGATGATTCTC+AGG | + | chr7.2:22871526-22871545 | MS.gene024336:CDS | 50.0% |
| ! | GATACACCGTTGGTTAGGCT+AGG | + | chr7.2:22871338-22871357 | MS.gene024336:CDS | 50.0% |
| ! | GTTCAGCTTGATGACACCAC+CGG | + | chr7.2:22870837-22870856 | MS.gene024336:CDS | 50.0% |
| ! | TGGGTCGGATTTGATTTCGC+CGG | - | chr7.2:22870859-22870878 | None:intergenic | 50.0% |
| !! | ATGGATTTGGTGGGTGGGTA+AGG | - | chr7.2:22870900-22870919 | None:intergenic | 50.0% |
| !! | TTGCGTCGGTTTCTGCTGAT+GGG | + | chr7.2:22871249-22871268 | MS.gene024336:CDS | 50.0% |
| !! | TTGCTCGTCGGAAGTGTCTT+GGG | - | chr7.2:22870682-22870701 | None:intergenic | 50.0% |
| !! | TTTGCGTCGGTTTCTGCTGA+TGG | + | chr7.2:22871248-22871267 | MS.gene024336:CDS | 50.0% |
| CGATTCCGACGAATCAGCGT+CGG | + | chr7.2:22870998-22871017 | MS.gene024336:CDS | 55.0% | |
| GGATCAAGCCCACCTTCAAC+AGG | - | chr7.2:22871584-22871603 | None:intergenic | 55.0% | |
| GGGTGGGTAAGGATGTTCGA+AGG | - | chr7.2:22870889-22870908 | None:intergenic | 55.0% | |
| TCAATGGGGCAGCCTGTTGA+AGG | + | chr7.2:22871569-22871588 | MS.gene024336:CDS | 55.0% | |
| TGTCTCTGCAACTCCACCAC+CGG | - | chr7.2:22871452-22871471 | None:intergenic | 55.0% | |
| ! | CACCGTTGGTTAGGCTAGGT+TGG | + | chr7.2:22871342-22871361 | MS.gene024336:CDS | 55.0% |
| ! | GTCGGATTTGATTTCGCCGG+TGG | - | chr7.2:22870856-22870875 | None:intergenic | 55.0% |
| ! | TCGTTTTCCAACGCTACCGG+TGG | + | chr7.2:22871433-22871452 | MS.gene024336:CDS | 55.0% |
| ! | TTTTCCAACGCTACCGGTGG+TGG | + | chr7.2:22871436-22871455 | MS.gene024336:CDS | 55.0% |
| !! | AGACTCCGACGCTGATTCGT+CGG | - | chr7.2:22871006-22871025 | None:intergenic | 55.0% |
| !! | CGACGCTGATTCGTCGGAAT+CGG | - | chr7.2:22871000-22871019 | None:intergenic | 55.0% |
| !! | CGTCGGAAGTGTCTTGGGTT+GGG | - | chr7.2:22870677-22870696 | None:intergenic | 55.0% |
| !! | CTCGAAGTACCGATTCGACG+TGG | - | chr7.2:22871119-22871138 | None:intergenic | 55.0% |
| !! | GGCGTTGGCAGTCTTTGTCA+GGG | - | chr7.2:22870929-22870948 | None:intergenic | 55.0% |
| !! | GTTGCTCGTCGGAAGTGTCT+TGG | - | chr7.2:22870683-22870702 | None:intergenic | 55.0% |
| !! | TCGTCGGAAGTGTCTTGGGT+TGG | - | chr7.2:22870678-22870697 | None:intergenic | 55.0% |
| AACTCCACCACCGGTAGCGT+TGG | - | chr7.2:22871443-22871462 | None:intergenic | 60.0% | |
| ACGGAGGAAATCGGAGGAGG+TGG | - | chr7.2:22870964-22870983 | None:intergenic | 60.0% | |
| ATGGGGCAGCCTGTTGAAGG+TGG | + | chr7.2:22871572-22871591 | MS.gene024336:CDS | 60.0% | |
| CGGAGATCCGCCAAATACGG+AGG | - | chr7.2:22870980-22870999 | None:intergenic | 60.0% | |
| TGGGGCAGCCTGTTGAAGGT+GGG | + | chr7.2:22871573-22871592 | MS.gene024336:CDS | 60.0% | |
| ! | GAATCAGCGTCGGAGTCTCG+TGG | + | chr7.2:22871008-22871027 | MS.gene024336:CDS | 60.0% |
| !! | GGGCGTTGGCAGTCTTTGTC+AGG | - | chr7.2:22870930-22870949 | None:intergenic | 60.0% |
| AATCGGAGGAGGTGGCGAGG+AGG | - | chr7.2:22870956-22870975 | None:intergenic | 65.0% | |
| ACTATGCGGCGCCCACGCTA+TGG | - | chr7.2:22871492-22871511 | None:intergenic | 65.0% | |
| GGAAATCGGAGGAGGTGGCG+AGG | - | chr7.2:22870959-22870978 | None:intergenic | 65.0% | |
| AGGAGGTGGCGAGGAGGTCG+GGG | - | chr7.2:22870950-22870969 | None:intergenic | 70.0% | |
| GAGGAGGTGGCGAGGAGGTC+GGG | - | chr7.2:22870951-22870970 | None:intergenic | 70.0% | |
| GGAGGAGGTGGCGAGGAGGT+CGG | - | chr7.2:22870952-22870971 | None:intergenic | 70.0% | |
| TGGCGAGGAGGTCGGGGCGT+TGG | - | chr7.2:22870944-22870963 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 22870657 | 22871715 | 22870657 | ID=MS.gene024336 |
| chr7.2 | mRNA | 22870657 | 22871715 | 22870657 | ID=MS.gene024336.t1;Parent=MS.gene024336 |
| chr7.2 | exon | 22870657 | 22871715 | 22870657 | ID=MS.gene024336.t1.exon1;Parent=MS.gene024336.t1 |
| chr7.2 | CDS | 22870657 | 22871715 | 22870657 | ID=cds.MS.gene024336.t1;Parent=MS.gene024336.t1 |
| Gene Sequence |
| Protein sequence |
