Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02443.t1 | XP_003612033.1 | 97.6 | 416 | 10 | 0 | 1 | 416 | 1 | 416 | 1.60E-234 | 821.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02443.t1 | Q6Z2G9 | 62.7 | 434 | 138 | 7 | 1 | 416 | 1 | 428 | 3.2e-146 | 519.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02443.t1 | G7KEX1 | 97.6 | 416 | 10 | 0 | 1 | 416 | 1 | 416 | 1.2e-234 | 821.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene02443.t1 | TF | TUB |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene27297 | MS.gene02443 | PPI |
| MS.gene26978 | MS.gene02443 | PPI |
| MS.gene02443 | MS.gene24262 | PPI |
| MS.gene90691 | MS.gene02443 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02443.t1 | MTR_5g020580 | 97.596 | 416 | 10 | 0 | 1 | 416 | 1 | 416 | 0.0 | 841 |
| MS.gene02443.t1 | MTR_8g077195 | 74.519 | 416 | 102 | 2 | 1 | 416 | 1 | 412 | 0.0 | 649 |
| MS.gene02443.t1 | MTR_1g022370 | 62.903 | 434 | 131 | 8 | 1 | 416 | 1 | 422 | 0.0 | 527 |
| MS.gene02443.t1 | MTR_8g077620 | 57.869 | 413 | 139 | 9 | 1 | 407 | 1 | 384 | 2.88e-160 | 457 |
| MS.gene02443.t1 | MTR_8g077675 | 58.111 | 413 | 151 | 9 | 1 | 409 | 1 | 395 | 3.37e-159 | 454 |
| MS.gene02443.t1 | MTR_2g007930 | 55.069 | 434 | 170 | 12 | 1 | 416 | 1 | 427 | 1.36e-153 | 441 |
| MS.gene02443.t1 | MTR_2g020280 | 57.182 | 369 | 151 | 3 | 48 | 416 | 32 | 393 | 1.99e-149 | 429 |
| MS.gene02443.t1 | MTR_1g098790 | 53.182 | 440 | 173 | 12 | 1 | 416 | 1 | 431 | 7.95e-149 | 429 |
| MS.gene02443.t1 | MTR_1g088960 | 52.871 | 418 | 179 | 7 | 1 | 416 | 1 | 402 | 4.04e-146 | 421 |
| MS.gene02443.t1 | MTR_2g076200 | 50.829 | 362 | 146 | 2 | 55 | 416 | 42 | 371 | 2.99e-127 | 372 |
| MS.gene02443.t1 | MTR_8g077650 | 51.786 | 392 | 113 | 12 | 37 | 413 | 3 | 333 | 4.95e-119 | 350 |
| MS.gene02443.t1 | MTR_2g020280 | 58.140 | 301 | 119 | 3 | 116 | 416 | 1 | 294 | 2.83e-118 | 346 |
| MS.gene02443.t1 | MTR_2g076210 | 44.772 | 373 | 167 | 6 | 48 | 416 | 30 | 367 | 5.36e-101 | 305 |
| MS.gene02443.t1 | MTR_8g077640 | 58.667 | 225 | 65 | 5 | 1 | 207 | 46 | 260 | 3.34e-69 | 224 |
| MS.gene02443.t1 | MTR_8g077640 | 55.556 | 117 | 51 | 1 | 291 | 406 | 267 | 383 | 1.89e-33 | 129 |
| MS.gene02443.t1 | MTR_1g023800 | 53.704 | 162 | 70 | 2 | 1 | 161 | 1 | 158 | 1.06e-55 | 181 |
| MS.gene02443.t1 | MTR_0210s0010 | 71.134 | 97 | 22 | 1 | 98 | 194 | 9 | 99 | 3.68e-37 | 131 |
| MS.gene02443.t1 | MTR_0479s0040 | 74.286 | 70 | 12 | 1 | 114 | 183 | 12 | 75 | 2.97e-25 | 98.6 |
| MS.gene02443.t1 | MTR_2g105390 | 36.697 | 109 | 54 | 4 | 313 | 415 | 260 | 359 | 2.02e-12 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02443.t1 | AT2G18280 | 63.876 | 418 | 124 | 7 | 1 | 416 | 1 | 393 | 0.0 | 518 |
| MS.gene02443.t1 | AT2G18280 | 63.876 | 418 | 124 | 7 | 1 | 416 | 1 | 393 | 0.0 | 518 |
| MS.gene02443.t1 | AT1G47270 | 58.333 | 396 | 131 | 9 | 32 | 416 | 16 | 388 | 9.23e-155 | 442 |
| MS.gene02443.t1 | AT1G47270 | 58.333 | 396 | 131 | 9 | 32 | 416 | 41 | 413 | 1.19e-154 | 443 |
| MS.gene02443.t1 | AT1G47270 | 58.333 | 396 | 131 | 9 | 32 | 416 | 40 | 412 | 1.35e-154 | 443 |
| MS.gene02443.t1 | AT1G25280 | 53.795 | 448 | 172 | 9 | 1 | 416 | 1 | 445 | 1.37e-153 | 442 |
| MS.gene02443.t1 | AT2G47900 | 53.589 | 418 | 181 | 5 | 1 | 416 | 1 | 407 | 6.51e-152 | 436 |
| MS.gene02443.t1 | AT2G47900 | 53.717 | 417 | 181 | 5 | 1 | 416 | 1 | 406 | 1.22e-151 | 436 |
| MS.gene02443.t1 | AT2G47900 | 53.717 | 417 | 181 | 5 | 1 | 416 | 1 | 406 | 1.22e-151 | 436 |
| MS.gene02443.t1 | AT1G76900 | 50.866 | 462 | 174 | 9 | 1 | 416 | 1 | 455 | 3.39e-145 | 421 |
| MS.gene02443.t1 | AT1G76900 | 50.866 | 462 | 174 | 9 | 1 | 416 | 1 | 455 | 3.39e-145 | 421 |
| MS.gene02443.t1 | AT1G76900 | 50.866 | 462 | 174 | 9 | 1 | 416 | 1 | 455 | 3.39e-145 | 421 |
| MS.gene02443.t1 | AT1G43640 | 50.000 | 442 | 182 | 12 | 1 | 416 | 1 | 429 | 1.45e-142 | 413 |
| MS.gene02443.t1 | AT5G18680 | 53.887 | 373 | 147 | 7 | 51 | 416 | 35 | 389 | 2.47e-130 | 380 |
| MS.gene02443.t1 | AT1G43640 | 52.151 | 372 | 147 | 9 | 67 | 416 | 1 | 363 | 1.77e-128 | 375 |
| MS.gene02443.t1 | AT3G06380 | 51.671 | 389 | 168 | 7 | 31 | 416 | 9 | 380 | 3.91e-128 | 375 |
| MS.gene02443.t1 | AT1G53320 | 51.934 | 362 | 148 | 3 | 55 | 416 | 44 | 379 | 1.54e-124 | 365 |
| MS.gene02443.t1 | AT5G18680 | 54.369 | 309 | 117 | 6 | 114 | 416 | 7 | 297 | 1.64e-105 | 314 |
| MS.gene02443.t1 | AT3G06380 | 54.153 | 301 | 119 | 6 | 118 | 416 | 5 | 288 | 2.03e-101 | 303 |
| MS.gene02443.t1 | AT1G25280 | 56.180 | 267 | 93 | 6 | 174 | 416 | 1 | 267 | 1.01e-94 | 285 |
| MS.gene02443.t1 | AT1G25280 | 56.180 | 267 | 93 | 6 | 174 | 416 | 1 | 267 | 1.01e-94 | 285 |
| MS.gene02443.t1 | AT1G61940 | 50.575 | 87 | 43 | 0 | 58 | 144 | 1 | 87 | 4.16e-26 | 106 |
| MS.gene02443.t1 | AT1G61940 | 54.098 | 61 | 28 | 0 | 58 | 118 | 1 | 61 | 5.97e-16 | 77.4 |
Find 111 sgRNAs with CRISPR-Local
Find 183 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCTGCTGGACCGGCTATT+TGG | 0.209525 | 5.3:+11872479 | None:intergenic |
| CCAATTGGATCTTTACCTTT+TGG | 0.222216 | 5.3:+11872233 | None:intergenic |
| TAACACGGCCCTTGAAATTT+AGG | 0.254077 | 5.3:+11872096 | None:intergenic |
| CCAGCAGGAGATTTCATTCT+AGG | 0.267212 | 5.3:-11872466 | MS.gene02443:CDS |
| TGGAAAAGATATATTTACTA+TGG | 0.274718 | 5.3:-11871970 | MS.gene02443:CDS |
| CACAGACTTCATCATATCTT+TGG | 0.281729 | 5.3:-11872712 | MS.gene02443:CDS |
| ATCACCTGCTTTAACGAAAT+AGG | 0.313540 | 5.3:+11874007 | None:intergenic |
| TTGCAGCTGTTCATGCCATC+TGG | 0.337933 | 5.3:+11872127 | None:intergenic |
| ATCTTGCAGTTTGGAAAGAT+TGG | 0.342353 | 5.3:-11871990 | MS.gene02443:CDS |
| CGTCAATCTTCCACACTCTT+CGG | 0.347596 | 5.3:+11874033 | None:intergenic |
| TTCAACCCTCGCAGAGTTGC+CGG | 0.349688 | 5.3:-11872198 | MS.gene02443:CDS |
| GTCAATCTTCCACACTCTTC+GGG | 0.352453 | 5.3:+11874034 | None:intergenic |
| GAGAAGGTTATCTTGCAGTT+TGG | 0.354935 | 5.3:-11871999 | MS.gene02443:CDS |
| TATACCTGTCTCAGCTGTTC+AGG | 0.357164 | 5.3:-11872333 | MS.gene02443:CDS |
| TAGAAGAGACCGAGACTTCT+TGG | 0.372683 | 5.3:-11874135 | MS.gene02443:CDS |
| TCTGCATATCTATTGTACTA+TGG | 0.382229 | 5.3:-11873831 | MS.gene02443:CDS |
| ATGATGCAATTCATTCTTCT+CGG | 0.382856 | 5.3:+11872362 | None:intergenic |
| CCAAGGGCCATTTGAGTCTC+TGG | 0.405945 | 5.3:-11872168 | MS.gene02443:CDS |
| ATAACCTTCTCTTGCTCTGC+AGG | 0.415381 | 5.3:+11872011 | None:intergenic |
| TAATTACACGCTGGAACTCT+TGG | 0.415943 | 5.3:+11872434 | None:intergenic |
| ATGCTGGTGCCTAAATTTCA+AGG | 0.430024 | 5.3:-11872105 | MS.gene02443:CDS |
| TGAGGAAAAGATGTAGGAGT+TGG | 0.437219 | 5.3:+11872296 | None:intergenic |
| ACCTATTCAGCAGGGACAAT+GGG | 0.444059 | 5.3:-11874200 | MS.gene02443:CDS |
| AGTGATGTTAGAGTGATATC+AGG | 0.447610 | 5.3:+11874226 | None:intergenic |
| GAATTGCTTAAATCTCCAAT+TGG | 0.451744 | 5.3:+11872218 | None:intergenic |
| TGGAGGTTGGCTGTCATATA+TGG | 0.452519 | 5.3:+11872520 | None:intergenic |
| CTCCGATACAGTGCTTCATC+AGG | 0.459633 | 5.3:-11873869 | MS.gene02443:CDS |
| GCCCATTGTCCCTGCTGAAT+AGG | 0.468212 | 5.3:+11874199 | None:intergenic |
| CCAAAAGGTAAAGATCCAAT+TGG | 0.470093 | 5.3:-11872233 | MS.gene02443:CDS |
| ATCACTTGAACCTATTCAGC+AGG | 0.471218 | 5.3:-11874209 | MS.gene02443:CDS |
| AGCCAACCTCCACACGGAGC+TGG | 0.473234 | 5.3:-11872509 | MS.gene02443:CDS |
| GGCATGAACAGCTGCAATGC+TGG | 0.474704 | 5.3:-11872121 | MS.gene02443:CDS |
| AATGAAATCTCCTGCTGGAC+CGG | 0.476146 | 5.3:+11872471 | None:intergenic |
| GCGGAGAACATTCAGCTCAT+AGG | 0.477645 | 5.3:+11872394 | None:intergenic |
| AACTCAAGGAGATGAGGGAT+GGG | 0.484739 | 5.3:-11874318 | MS.gene02443:CDS |
| CTGAATGTTCTCCGCACTAG+AGG | 0.484848 | 5.3:-11872386 | MS.gene02443:CDS |
| CGTTCCAGCAATGCGTATGT+TGG | 0.488866 | 5.3:-11872672 | MS.gene02443:CDS |
| AACCAAATAGCCGGTCCAGC+AGG | 0.493265 | 5.3:-11872481 | MS.gene02443:CDS |
| AATGGCCCTTGGCTCTGAAC+CGG | 0.498889 | 5.3:+11872179 | None:intergenic |
| GTAATTTGAGGAAAAGATGT+AGG | 0.503684 | 5.3:+11872290 | None:intergenic |
| GAACTCAAGGAGATGAGGGA+TGG | 0.505860 | 5.3:-11874319 | MS.gene02443:CDS |
| TGCAGCTGTTCATGCCATCT+GGG | 0.506117 | 5.3:+11872128 | None:intergenic |
| GTTTCCTATTTCGTTAAAGC+AGG | 0.506221 | 5.3:-11874011 | MS.gene02443:intron |
| CCTTCCTGAACAGCTGAGAC+AGG | 0.514005 | 5.3:+11872329 | None:intergenic |
| GAGTTGCCGGTTCAGAGCCA+AGG | 0.518280 | 5.3:-11872185 | MS.gene02443:CDS |
| CAGGAGATTTCATTCTAGGC+AGG | 0.528326 | 5.3:-11872462 | MS.gene02443:CDS |
| CATGGATCTCATTCACATGC+TGG | 0.528401 | 5.3:+11871882 | None:intergenic |
| TTGAGTACCAGAGACTCAAA+TGG | 0.530012 | 5.3:+11872161 | None:intergenic |
| AGTTAAGAACTTTCAACTTG+TGG | 0.534362 | 5.3:-11872063 | MS.gene02443:CDS |
| GAAACGACAACAGCACGTGC+AGG | 0.536741 | 5.3:+11874112 | None:intergenic |
| CCTAGAATGAAATCTCCTGC+TGG | 0.538624 | 5.3:+11872466 | None:intergenic |
| AAATGCTCATCAGTAATTTG+AGG | 0.539761 | 5.3:+11872278 | None:intergenic |
| CCTGTCTCAGCTGTTCAGGA+AGG | 0.540458 | 5.3:-11872329 | MS.gene02443:CDS |
| TGTCGTTGAGAAGCATAGTA+CGG | 0.541748 | 5.3:-11874342 | MS.gene02443:CDS |
| CTGTCTCAGCTGTTCAGGAA+GGG | 0.541956 | 5.3:-11872328 | MS.gene02443:CDS |
| CGAGGAGAGGTGTGGCAAGT+AGG | 0.542255 | 5.3:-11874282 | MS.gene02443:CDS |
| GCATATCGCAAAGGCTTGGA+AGG | 0.543599 | 5.3:+11871926 | None:intergenic |
| GCTGTCATATATGGTGAACT+TGG | 0.544644 | 5.3:+11872529 | None:intergenic |
| GTGCTTCTGTGTGTAAATCA+TGG | 0.549837 | 5.3:-11874087 | MS.gene02443:CDS |
| CCAGAGACTCAAATGGCCCT+TGG | 0.550663 | 5.3:+11872168 | None:intergenic |
| TTCCAGCTCCGTGTGGAGGT+TGG | 0.551308 | 5.3:+11872507 | None:intergenic |
| AACCTATTCAGCAGGGACAA+TGG | 0.551680 | 5.3:-11874201 | MS.gene02443:CDS |
| ACGTGCAGGCCAAGAAGTCT+CGG | 0.554427 | 5.3:+11874126 | None:intergenic |
| AAGCATAGTACGGGAACTCA+AGG | 0.555180 | 5.3:-11874332 | MS.gene02443:CDS |
| TCTGAACCGGCAACTCTGCG+AGG | 0.556736 | 5.3:+11872192 | None:intergenic |
| AAGGAGATGAGGGATGGGAT+TGG | 0.557067 | 5.3:-11874313 | MS.gene02443:CDS |
| TGCTACTTGATATAATTCGA+AGG | 0.558581 | 5.3:-11874159 | MS.gene02443:CDS |
| TGTCTCAGCTGTTCAGGAAG+GGG | 0.560697 | 5.3:-11872327 | MS.gene02443:CDS |
| ATCGGAGAATCACGAGGACC+CGG | 0.561657 | 5.3:+11873885 | None:intergenic |
| CTCCTGATGAAGCACTGTAT+CGG | 0.562380 | 5.3:+11873867 | None:intergenic |
| TTCTTCTCGGCCCTCTAGTG+CGG | 0.564773 | 5.3:+11872375 | None:intergenic |
| GTCTCAGCTGTTCAGGAAGG+GGG | 0.566290 | 5.3:-11872326 | MS.gene02443:CDS |
| CTGAACCGGCAACTCTGCGA+GGG | 0.569008 | 5.3:+11872193 | None:intergenic |
| GTCGTTGAGAAGCATAGTAC+GGG | 0.569276 | 5.3:-11874341 | MS.gene02443:CDS |
| ATATCTATTGTACTATGGAC+TGG | 0.572719 | 5.3:-11873826 | MS.gene02443:CDS |
| GCTACTTGATATAATTCGAA+GGG | 0.575810 | 5.3:-11874158 | MS.gene02443:CDS |
| GCGTCAGCACCAGAGCCAAA+AGG | 0.578551 | 5.3:-11872248 | MS.gene02443:CDS |
| TCAAGCATATCGCAAAGGCT+TGG | 0.579509 | 5.3:+11871922 | None:intergenic |
| AACATTCAGCTCATAGGCAA+TGG | 0.582469 | 5.3:+11872400 | None:intergenic |
| CTGGAATACAACCAAATAGC+CGG | 0.589720 | 5.3:-11872490 | MS.gene02443:CDS |
| CGATACAGTGCTTCATCAGG+AGG | 0.590035 | 5.3:-11873866 | MS.gene02443:CDS |
| TACGGGAACTCAAGGAGATG+AGG | 0.591073 | 5.3:-11874324 | MS.gene02443:CDS |
| CTGAACAATCTCTTGTGTAA+CGG | 0.594307 | 5.3:+11874060 | None:intergenic |
| ACGGGAACTCAAGGAGATGA+GGG | 0.594362 | 5.3:-11874323 | MS.gene02443:CDS |
| TTCTCCTGCAGAGCAAGAGA+AGG | 0.597006 | 5.3:-11872015 | MS.gene02443:CDS |
| ATGCGTATGTTGGAAAACTC+AGG | 0.602255 | 5.3:-11872662 | MS.gene02443:intron |
| AGTTGCCGGTTCAGAGCCAA+GGG | 0.602888 | 5.3:-11872184 | MS.gene02443:CDS |
| GCAGGAGAAACATTATGAGA+TGG | 0.604319 | 5.3:+11872029 | None:intergenic |
| CAAGTAGGCATTCACAGCGT+CGG | 0.608761 | 5.3:-11874267 | MS.gene02443:CDS |
| GGAAGGCAGAGAGTGGATAA+CGG | 0.610357 | 5.3:+11871943 | None:intergenic |
| GCTGCTCAAGCATATCGCAA+AGG | 0.610612 | 5.3:+11871917 | None:intergenic |
| TTTCAAGGGCCGTGTTACAG+TGG | 0.611483 | 5.3:-11872090 | MS.gene02443:CDS |
| TGAATGTTCTCCGCACTAGA+GGG | 0.618617 | 5.3:-11872385 | MS.gene02443:CDS |
| AAGGCTTGGAAGGCAGAGAG+TGG | 0.622272 | 5.3:+11871936 | None:intergenic |
| TTCTGTGTGTAAATCATGGA+GGG | 0.630242 | 5.3:-11874083 | MS.gene02443:CDS |
| AGATATGATGAAGTCTGTGC+CGG | 0.635175 | 5.3:+11872716 | None:intergenic |
| GTTCAGACTCCCGAAGAGTG+TGG | 0.642949 | 5.3:-11874043 | MS.gene02443:CDS |
| TGCTGGTGCCTAAATTTCAA+GGG | 0.642974 | 5.3:-11872104 | MS.gene02443:CDS |
| TAACTGAAGCCACTGTAACA+CGG | 0.643817 | 5.3:+11872081 | None:intergenic |
| TGTATTCCAGCTCCGTGTGG+AGG | 0.645160 | 5.3:+11872503 | None:intergenic |
| CTTCTGTGTGTAAATCATGG+AGG | 0.649209 | 5.3:-11874084 | MS.gene02443:CDS |
| ATTGGTAATACGTCGAGGAG+AGG | 0.649495 | 5.3:-11874295 | MS.gene02443:CDS |
| ATATCAAGTAGCAATTCAGA+TGG | 0.650336 | 5.3:+11874169 | None:intergenic |
| GGTTGTATTCCAGCTCCGTG+TGG | 0.669899 | 5.3:+11872500 | None:intergenic |
| CACTGTATCGGAGAATCACG+AGG | 0.670191 | 5.3:+11873879 | None:intergenic |
| GATACAGTGCTTCATCAGGA+GGG | 0.688983 | 5.3:-11873865 | MS.gene02443:CDS |
| TCACTTGAACCTATTCAGCA+GGG | 0.690245 | 5.3:-11874208 | MS.gene02443:CDS |
| TAATACGTCGAGGAGAGGTG+TGG | 0.694801 | 5.3:-11874290 | MS.gene02443:CDS |
| ATGGGATTGGTAATACGTCG+AGG | 0.700501 | 5.3:-11874300 | MS.gene02443:CDS |
| TATGACAGCCAACCTCCACA+CGG | 0.700970 | 5.3:-11872515 | MS.gene02443:CDS |
| CTAACAATATAATTACACGC+TGG | 0.702672 | 5.3:+11872425 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTGTAATGCTAAATTTTA+GGG | - | chr5.3:11872908-11872927 | MS.gene02443:intron | 15.0% |
| !!! | TTATTGTAATGCTAAATTTT+AGG | - | chr5.3:11872907-11872926 | MS.gene02443:intron | 15.0% |
| !! | ACTTTCTCAAATTAATTACT+TGG | - | chr5.3:11872656-11872675 | MS.gene02443:intron | 20.0% |
| !! | TACCAATTTCAAAATCATTA+AGG | + | chr5.3:11873405-11873424 | None:intergenic | 20.0% |
| !! | TGGAAAAGATATATTTACTA+TGG | - | chr5.3:11874263-11874282 | MS.gene02443:CDS | 20.0% |
| !! | TTTATTGCACTAAATATGTA+GGG | - | chr5.3:11872578-11872597 | MS.gene02443:intron | 20.0% |
| !!! | AACTGATGATAAATTTTGAT+AGG | - | chr5.3:11873665-11873684 | MS.gene02443:intron | 20.0% |
| !!! | TTTAAAATCACCCAAATAAA+GGG | + | chr5.3:11873099-11873118 | None:intergenic | 20.0% |
| !!! | TTTAAGCAATTTTCAAGTAT+TGG | + | chr5.3:11872962-11872981 | None:intergenic | 20.0% |
| !!! | TTTCATTCTTTTTTCTCAAA+GGG | - | chr5.3:11872482-11872501 | MS.gene02443:CDS | 20.0% |
| !!! | TTTTATTGCACTAAATATGT+AGG | - | chr5.3:11872577-11872596 | MS.gene02443:intron | 20.0% |
| !!! | TTTTCATTCTTTTTTCTCAA+AGG | - | chr5.3:11872481-11872500 | MS.gene02443:CDS | 20.0% |
| ! | AATCATTAAGGTGAATTGAA+CGG | + | chr5.3:11873393-11873412 | None:intergenic | 25.0% |
| ! | CAAGTAATTTCTTAACTATG+AGG | + | chr5.3:11873006-11873025 | None:intergenic | 25.0% |
| ! | TTAATTACACGTGCATTATT+TGG | - | chr5.3:11872819-11872838 | MS.gene02443:intron | 25.0% |
| ! | TTACGAATTTAGATCTTGAA+CGG | - | chr5.3:11872551-11872570 | MS.gene02443:intron | 25.0% |
| !! | AGATAAAATAAAGAGTGTGT+TGG | + | chr5.3:11873642-11873661 | None:intergenic | 25.0% |
| !! | TCATTTGTTTCCCTTTATTT+GGG | - | chr5.3:11873086-11873105 | MS.gene02443:intron | 25.0% |
| !! | TTTGATAGGTCTAACTTTTT+GGG | - | chr5.3:11873679-11873698 | MS.gene02443:intron | 25.0% |
| !! | TTTTGATAGGTCTAACTTTT+TGG | - | chr5.3:11873678-11873697 | MS.gene02443:intron | 25.0% |
| !!! | AAATTTTAGGGCTAATTCTA+CGG | - | chr5.3:11872920-11872939 | MS.gene02443:intron | 25.0% |
| !!! | ACTTTTTGTTTATGAATAGC+CGG | - | chr5.3:11872329-11872348 | MS.gene02443:CDS | 25.0% |
| !!! | CACCTTAATGATTTTGAAAT+TGG | - | chr5.3:11873400-11873419 | MS.gene02443:intron | 25.0% |
| !!! | CTTTAAAATCACCCAAATAA+AGG | + | chr5.3:11873100-11873119 | None:intergenic | 25.0% |
| !!! | TAGATGTTCTTTTTCATTGT+TGG | - | chr5.3:11873264-11873283 | MS.gene02443:intron | 25.0% |
| !!! | TTAATTCTTCACTCCTTTTT+TGG | - | chr5.3:11872248-11872267 | MS.gene02443:CDS | 25.0% |
| !!! | TTCTGTTTTTTCTTATACAG+CGG | - | chr5.3:11873443-11873462 | MS.gene02443:intron | 25.0% |
| !!! | TTGAATCACTTTTGAAAACT+TGG | - | chr5.3:11872525-11872544 | MS.gene02443:CDS | 25.0% |
| !!! | TTTTAACTTCTGACTTGAAT+GGG | - | chr5.3:11873311-11873330 | MS.gene02443:intron | 25.0% |
| !!! | TTTTTAACTTCTGACTTGAA+TGG | - | chr5.3:11873310-11873329 | MS.gene02443:intron | 25.0% |
| AAATGCTCATCAGTAATTTG+AGG | + | chr5.3:11873958-11873977 | None:intergenic | 30.0% | |
| AACAACAATTACGCCAAAAA+AGG | + | chr5.3:11872264-11872283 | None:intergenic | 30.0% | |
| AAGATACAGAACAACCAAAA+TGG | + | chr5.3:11872300-11872319 | None:intergenic | 30.0% | |
| AGTTAAGAACTTTCAACTTG+TGG | - | chr5.3:11874170-11874189 | MS.gene02443:CDS | 30.0% | |
| ATATCAAGTAGCAATTCAGA+TGG | + | chr5.3:11872067-11872086 | None:intergenic | 30.0% | |
| ATATCTATTGTACTATGGAC+TGG | - | chr5.3:11872407-11872426 | MS.gene02443:CDS | 30.0% | |
| ATGATGCAATTCATTCTTCT+CGG | + | chr5.3:11873874-11873893 | None:intergenic | 30.0% | |
| CTAACAATATAATTACACGC+TGG | + | chr5.3:11873811-11873830 | None:intergenic | 30.0% | |
| CTCATTTGTTTCCCTTTATT+TGG | - | chr5.3:11873085-11873104 | MS.gene02443:intron | 30.0% | |
| GAATTGCTTAAATCTCCAAT+TGG | + | chr5.3:11874018-11874037 | None:intergenic | 30.0% | |
| GCTACTTGATATAATTCGAA+GGG | - | chr5.3:11872075-11872094 | MS.gene02443:CDS | 30.0% | |
| GTAATTTGAGGAAAAGATGT+AGG | + | chr5.3:11873946-11873965 | None:intergenic | 30.0% | |
| GTGTTGGAAATTTGAAAAGT+GGG | + | chr5.3:11873626-11873645 | None:intergenic | 30.0% | |
| TATTAGCTGCCAAAAAGATA+AGG | - | chr5.3:11873487-11873506 | MS.gene02443:intron | 30.0% | |
| TCTGCATATCTATTGTACTA+TGG | - | chr5.3:11872402-11872421 | MS.gene02443:CDS | 30.0% | |
| TGATTCGACAAAAAAAGGAA+GGG | - | chr5.3:11873034-11873053 | MS.gene02443:intron | 30.0% | |
| TGTGTTGGAAATTTGAAAAG+TGG | + | chr5.3:11873627-11873646 | None:intergenic | 30.0% | |
| TTGGAGTCATAGTATGAAAT+GGG | - | chr5.3:11873208-11873227 | MS.gene02443:intron | 30.0% | |
| ! | AAACTAGAAGTGCATTTCTT+TGG | - | chr5.3:11873189-11873208 | MS.gene02443:intron | 30.0% |
| ! | TGCTACTTGATATAATTCGA+AGG | - | chr5.3:11872074-11872093 | MS.gene02443:CDS | 30.0% |
| ! | TTGATTCGACAAAAAAAGGA+AGG | - | chr5.3:11873033-11873052 | MS.gene02443:intron | 30.0% |
| ! | TTTGGAGTCATAGTATGAAA+TGG | - | chr5.3:11873207-11873226 | MS.gene02443:intron | 30.0% |
| !! | CTTTTTGTTTATGAATAGCC+GGG | - | chr5.3:11872330-11872349 | MS.gene02443:CDS | 30.0% |
| !! | GATGTTGATTCGACAAAAAA+AGG | - | chr5.3:11873029-11873048 | MS.gene02443:intron | 30.0% |
| AGTGATGTTAGAGTGATATC+AGG | + | chr5.3:11872010-11872029 | None:intergenic | 35.0% | |
| ATCACCTGCTTTAACGAAAT+AGG | + | chr5.3:11872229-11872248 | None:intergenic | 35.0% | |
| ATCTTGCAGTTTGGAAAGAT+TGG | - | chr5.3:11874243-11874262 | MS.gene02443:CDS | 35.0% | |
| CACAGACTTCATCATATCTT+TGG | - | chr5.3:11873521-11873540 | MS.gene02443:intron | 35.0% | |
| CACATTGAAGCAAACTTACA+TGG | + | chr5.3:11872435-11872454 | None:intergenic | 35.0% | |
| CCAAAAGGTAAAGATCCAAT+TGG | - | chr5.3:11874000-11874019 | MS.gene02443:intron | 35.0% | |
| CTGAACAATCTCTTGTGTAA+CGG | + | chr5.3:11872176-11872195 | None:intergenic | 35.0% | |
| GAGGAAAACAAAGCACAAAT+CGG | + | chr5.3:11873371-11873390 | None:intergenic | 35.0% | |
| GTTTCCTATTTCGTTAAAGC+AGG | - | chr5.3:11872222-11872241 | MS.gene02443:CDS | 35.0% | |
| TTCTGTGTGTAAATCATGGA+GGG | - | chr5.3:11872150-11872169 | MS.gene02443:CDS | 35.0% | |
| ! | CATGTAAGTTTGCTTCAATG+TGG | - | chr5.3:11872433-11872452 | MS.gene02443:CDS | 35.0% |
| ! | CCAATTGGATCTTTACCTTT+TGG | + | chr5.3:11874003-11874022 | None:intergenic | 35.0% |
| ! | GAAACAAATGAGTTGAGTTG+AGG | + | chr5.3:11873077-11873096 | None:intergenic | 35.0% |
| ! | TGGAAAACTCAGGTAAGTTT+TGG | - | chr5.3:11873581-11873600 | MS.gene02443:intron | 35.0% |
| ! | TTTTCGCTGCTTATCCATTT+TGG | - | chr5.3:11872283-11872302 | MS.gene02443:CDS | 35.0% |
| !! | TTTCAAGTATTGGTCTGATG+CGG | + | chr5.3:11872952-11872971 | None:intergenic | 35.0% |
| !!! | TTTGGGTGATTTTAAAGTGC+CGG | - | chr5.3:11873103-11873122 | MS.gene02443:intron | 35.0% |
| AAAAAGATAAGGAGGGCAAC+CGG | - | chr5.3:11873498-11873517 | MS.gene02443:intron | 40.0% | |
| AACAAAGCACAAATCGGTTG+AGG | + | chr5.3:11873365-11873384 | None:intergenic | 40.0% | |
| AACATTCAGCTCATAGGCAA+TGG | + | chr5.3:11873836-11873855 | None:intergenic | 40.0% | |
| AGATATGATGAAGTCTGTGC+CGG | + | chr5.3:11873520-11873539 | None:intergenic | 40.0% | |
| AGCTGCCAAAAAGATAAGGA+GGG | - | chr5.3:11873491-11873510 | MS.gene02443:intron | 40.0% | |
| ATCACTTGAACCTATTCAGC+AGG | - | chr5.3:11872024-11872043 | MS.gene02443:CDS | 40.0% | |
| ATGCGTATGTTGGAAAACTC+AGG | - | chr5.3:11873571-11873590 | MS.gene02443:intron | 40.0% | |
| ATGCTGGTGCCTAAATTTCA+AGG | - | chr5.3:11874128-11874147 | MS.gene02443:CDS | 40.0% | |
| CATTAAGGTGAATTGAACGG+AGG | + | chr5.3:11873390-11873409 | None:intergenic | 40.0% | |
| CTGGAATACAACCAAATAGC+CGG | - | chr5.3:11873743-11873762 | MS.gene02443:intron | 40.0% | |
| CTTCTGTGTGTAAATCATGG+AGG | - | chr5.3:11872149-11872168 | MS.gene02443:CDS | 40.0% | |
| GACTTGAATGGGACAGAAAT+TGG | - | chr5.3:11873322-11873341 | MS.gene02443:intron | 40.0% | |
| GAGAAGGTTATCTTGCAGTT+TGG | - | chr5.3:11874234-11874253 | MS.gene02443:CDS | 40.0% | |
| GCAGGAGAAACATTATGAGA+TGG | + | chr5.3:11874207-11874226 | None:intergenic | 40.0% | |
| GCTGTCATATATGGTGAACT+TGG | + | chr5.3:11873707-11873726 | None:intergenic | 40.0% | |
| GTGCTTCTGTGTGTAAATCA+TGG | - | chr5.3:11872146-11872165 | MS.gene02443:CDS | 40.0% | |
| GTTTGAACACGTGCATTACA+TGG | - | chr5.3:11872680-11872699 | MS.gene02443:CDS | 40.0% | |
| TAACACGGCCCTTGAAATTT+AGG | + | chr5.3:11874140-11874159 | None:intergenic | 40.0% | |
| TAACTGAAGCCACTGTAACA+CGG | + | chr5.3:11874155-11874174 | None:intergenic | 40.0% | |
| TAATTACACGCTGGAACTCT+TGG | + | chr5.3:11873802-11873821 | None:intergenic | 40.0% | |
| TAGCTGCCAAAAAGATAAGG+AGG | - | chr5.3:11873490-11873509 | MS.gene02443:intron | 40.0% | |
| TCAAAAACAAGTCTCCCAGA+TGG | - | chr5.3:11874091-11874110 | MS.gene02443:CDS | 40.0% | |
| TCACTTGAACCTATTCAGCA+GGG | - | chr5.3:11872025-11872044 | MS.gene02443:CDS | 40.0% | |
| TGAGGAAAAGATGTAGGAGT+TGG | + | chr5.3:11873940-11873959 | None:intergenic | 40.0% | |
| TGCTGGTGCCTAAATTTCAA+GGG | - | chr5.3:11874129-11874148 | MS.gene02443:CDS | 40.0% | |
| TTCGACAAAAAAAGGAAGGG+AGG | - | chr5.3:11873037-11873056 | MS.gene02443:intron | 40.0% | |
| TTGAGTACCAGAGACTCAAA+TGG | + | chr5.3:11874075-11874094 | None:intergenic | 40.0% | |
| ! | TGTCGTTGAGAAGCATAGTA+CGG | - | chr5.3:11871891-11871910 | MS.gene02443:CDS | 40.0% |
| ! | TTTTCCAACATACGCATTGC+TGG | + | chr5.3:11873568-11873587 | None:intergenic | 40.0% |
| AACCTATTCAGCAGGGACAA+TGG | - | chr5.3:11872032-11872051 | MS.gene02443:CDS | 45.0% | |
| AACTCAAGGAGATGAGGGAT+GGG | - | chr5.3:11871915-11871934 | MS.gene02443:CDS | 45.0% | |
| AAGCATAGTACGGGAACTCA+AGG | - | chr5.3:11871901-11871920 | MS.gene02443:CDS | 45.0% | |
| AATGAAATCTCCTGCTGGAC+CGG | + | chr5.3:11873765-11873784 | None:intergenic | 45.0% | |
| ACAAAAAAAGGAAGGGAGGC+GGG | - | chr5.3:11873041-11873060 | MS.gene02443:intron | 45.0% | |
| ACAGAAATTGGCTGAACCTG+TGG | - | chr5.3:11873334-11873353 | MS.gene02443:intron | 45.0% | |
| ACCTATTCAGCAGGGACAAT+GGG | - | chr5.3:11872033-11872052 | MS.gene02443:CDS | 45.0% | |
| ATAACCTTCTCTTGCTCTGC+AGG | + | chr5.3:11874225-11874244 | None:intergenic | 45.0% | |
| CAGGAGATTTCATTCTAGGC+AGG | - | chr5.3:11873771-11873790 | MS.gene02443:intron | 45.0% | |
| CCAGCAGGAGATTTCATTCT+AGG | - | chr5.3:11873767-11873786 | MS.gene02443:intron | 45.0% | |
| CCTAGAATGAAATCTCCTGC+TGG | + | chr5.3:11873770-11873789 | None:intergenic | 45.0% | |
| CGTCAATCTTCCACACTCTT+CGG | + | chr5.3:11872203-11872222 | None:intergenic | 45.0% | |
| CTAAAATCCGACAGCCTCTA+GGG | + | chr5.3:11873133-11873152 | None:intergenic | 45.0% | |
| GACAAAAAAAGGAAGGGAGG+CGG | - | chr5.3:11873040-11873059 | MS.gene02443:intron | 45.0% | |
| GATACAGTGCTTCATCAGGA+GGG | - | chr5.3:11872368-11872387 | MS.gene02443:CDS | 45.0% | |
| GTCAATCTTCCACACTCTTC+GGG | + | chr5.3:11872202-11872221 | None:intergenic | 45.0% | |
| TAGAAGAGACCGAGACTTCT+TGG | - | chr5.3:11872098-11872117 | MS.gene02443:CDS | 45.0% | |
| TATACCTGTCTCAGCTGTTC+AGG | - | chr5.3:11873900-11873919 | MS.gene02443:intron | 45.0% | |
| TCAAGCATATCGCAAAGGCT+TGG | + | chr5.3:11874314-11874333 | None:intergenic | 45.0% | |
| TGAATGTTCTCCGCACTAGA+GGG | - | chr5.3:11873848-11873867 | MS.gene02443:CDS | 45.0% | |
| ! | ATGGGATTGGTAATACGTCG+AGG | - | chr5.3:11871933-11871952 | MS.gene02443:CDS | 45.0% |
| ! | ATTGGTAATACGTCGAGGAG+AGG | - | chr5.3:11871938-11871957 | MS.gene02443:CDS | 45.0% |
| ! | GGTTGCCCTCCTTATCTTTT+TGG | + | chr5.3:11873499-11873518 | None:intergenic | 45.0% |
| ! | GTCGTTGAGAAGCATAGTAC+GGG | - | chr5.3:11871892-11871911 | MS.gene02443:CDS | 45.0% |
| ! | TCTAAAATCCGACAGCCTCT+AGG | + | chr5.3:11873134-11873153 | None:intergenic | 45.0% |
| ! | TGGAGGTTGGCTGTCATATA+TGG | + | chr5.3:11873716-11873735 | None:intergenic | 45.0% |
| !! | CTCCTGATGAAGCACTGTAT+CGG | + | chr5.3:11872369-11872388 | None:intergenic | 45.0% |
| !!! | GGATCTTTACCTTTTGGCTC+TGG | + | chr5.3:11873997-11874016 | None:intergenic | 45.0% |
| AAGGAGATGAGGGATGGGAT+TGG | - | chr5.3:11871920-11871939 | MS.gene02443:CDS | 50.0% | |
| ACGGGAACTCAAGGAGATGA+GGG | - | chr5.3:11871910-11871929 | MS.gene02443:CDS | 50.0% | |
| ATCGGTTGAGGTGTATCCAC+AGG | + | chr5.3:11873353-11873372 | None:intergenic | 50.0% | |
| CAAGTAGGCATTCACAGCGT+CGG | - | chr5.3:11871966-11871985 | MS.gene02443:CDS | 50.0% | |
| CACTGTATCGGAGAATCACG+AGG | + | chr5.3:11872357-11872376 | None:intergenic | 50.0% | |
| CGATACAGTGCTTCATCAGG+AGG | - | chr5.3:11872367-11872386 | MS.gene02443:CDS | 50.0% | |
| CGTTCCAGCAATGCGTATGT+TGG | - | chr5.3:11873561-11873580 | MS.gene02443:intron | 50.0% | |
| CTCCGATACAGTGCTTCATC+AGG | - | chr5.3:11872364-11872383 | MS.gene02443:CDS | 50.0% | |
| CTGAATGTTCTCCGCACTAG+AGG | - | chr5.3:11873847-11873866 | MS.gene02443:CDS | 50.0% | |
| CTGTCTCAGCTGTTCAGGAA+GGG | - | chr5.3:11873905-11873924 | MS.gene02443:intron | 50.0% | |
| GAACTCAAGGAGATGAGGGA+TGG | - | chr5.3:11871914-11871933 | MS.gene02443:CDS | 50.0% | |
| GCATATCGCAAAGGCTTGGA+AGG | + | chr5.3:11874310-11874329 | None:intergenic | 50.0% | |
| GCGGAGAACATTCAGCTCAT+AGG | + | chr5.3:11873842-11873861 | None:intergenic | 50.0% | |
| GCTGCTCAAGCATATCGCAA+AGG | + | chr5.3:11874319-11874338 | None:intergenic | 50.0% | |
| GGAAGGCAGAGAGTGGATAA+CGG | + | chr5.3:11874293-11874312 | None:intergenic | 50.0% | |
| TAATACGTCGAGGAGAGGTG+TGG | - | chr5.3:11871943-11871962 | MS.gene02443:CDS | 50.0% | |
| TACGGGAACTCAAGGAGATG+AGG | - | chr5.3:11871909-11871928 | MS.gene02443:CDS | 50.0% | |
| TATGACAGCCAACCTCCACA+CGG | - | chr5.3:11873718-11873737 | MS.gene02443:intron | 50.0% | |
| TGCAGCTGTTCATGCCATCT+GGG | + | chr5.3:11874108-11874127 | None:intergenic | 50.0% | |
| TGTCTCAGCTGTTCAGGAAG+GGG | - | chr5.3:11873906-11873925 | MS.gene02443:intron | 50.0% | |
| TTCTCCTGCAGAGCAAGAGA+AGG | - | chr5.3:11874218-11874237 | MS.gene02443:CDS | 50.0% | |
| TTGCAGCTGTTCATGCCATC+TGG | + | chr5.3:11874109-11874128 | None:intergenic | 50.0% | |
| TTTCAAGGGCCGTGTTACAG+TGG | - | chr5.3:11874143-11874162 | MS.gene02443:CDS | 50.0% | |
| AACCAAATAGCCGGTCCAGC+AGG | - | chr5.3:11873752-11873771 | MS.gene02443:intron | 55.0% | |
| AAGGCTTGGAAGGCAGAGAG+TGG | + | chr5.3:11874300-11874319 | None:intergenic | 55.0% | |
| ACGTGCAGGCCAAGAAGTCT+CGG | + | chr5.3:11872110-11872129 | None:intergenic | 55.0% | |
| ATCGGAGAATCACGAGGACC+CGG | + | chr5.3:11872351-11872370 | None:intergenic | 55.0% | |
| CCAAGGGCCATTTGAGTCTC+TGG | - | chr5.3:11874065-11874084 | MS.gene02443:CDS | 55.0% | |
| CCAGAGACTCAAATGGCCCT+TGG | + | chr5.3:11874068-11874087 | None:intergenic | 55.0% | |
| CCTGTCTCAGCTGTTCAGGA+AGG | - | chr5.3:11873904-11873923 | MS.gene02443:intron | 55.0% | |
| CCTTCCTGAACAGCTGAGAC+AGG | + | chr5.3:11873907-11873926 | None:intergenic | 55.0% | |
| GAAACGACAACAGCACGTGC+AGG | + | chr5.3:11872124-11872143 | None:intergenic | 55.0% | |
| GCCCATTGTCCCTGCTGAAT+AGG | + | chr5.3:11872037-11872056 | None:intergenic | 55.0% | |
| GGCATGAACAGCTGCAATGC+TGG | - | chr5.3:11874112-11874131 | MS.gene02443:CDS | 55.0% | |
| GGTTGTATTCCAGCTCCGTG+TGG | + | chr5.3:11873736-11873755 | None:intergenic | 55.0% | |
| GTCTCAGCTGTTCAGGAAGG+GGG | - | chr5.3:11873907-11873926 | MS.gene02443:intron | 55.0% | |
| GTTCAGACTCCCGAAGAGTG+TGG | - | chr5.3:11872190-11872209 | MS.gene02443:CDS | 55.0% | |
| TGTATTCCAGCTCCGTGTGG+AGG | + | chr5.3:11873733-11873752 | None:intergenic | 55.0% | |
| TTCAACCCTCGCAGAGTTGC+CGG | - | chr5.3:11874035-11874054 | MS.gene02443:CDS | 55.0% | |
| TTCTTCTCGGCCCTCTAGTG+CGG | + | chr5.3:11873861-11873880 | None:intergenic | 55.0% | |
| !! | AAAGTGCCGGTTCACCCTAG+AGG | - | chr5.3:11873116-11873135 | MS.gene02443:intron | 55.0% |
| !! | AATGGCCCTTGGCTCTGAAC+CGG | + | chr5.3:11874057-11874076 | None:intergenic | 55.0% |
| !! | AGTTGCCGGTTCAGAGCCAA+GGG | - | chr5.3:11874049-11874068 | MS.gene02443:CDS | 55.0% |
| AAGGAAGGGAGGCGGGAGTA+TGG | - | chr5.3:11873048-11873067 | MS.gene02443:intron | 60.0% | |
| CGGTTCACCCTAGAGGCTGT+CGG | - | chr5.3:11873123-11873142 | MS.gene02443:intron | 60.0% | |
| CTCCTGCTGGACCGGCTATT+TGG | + | chr5.3:11873757-11873776 | None:intergenic | 60.0% | |
| CTGAACCGGCAACTCTGCGA+GGG | + | chr5.3:11874043-11874062 | None:intergenic | 60.0% | |
| GCGTCAGCACCAGAGCCAAA+AGG | - | chr5.3:11873985-11874004 | MS.gene02443:intron | 60.0% | |
| TCTGAACCGGCAACTCTGCG+AGG | + | chr5.3:11874044-11874063 | None:intergenic | 60.0% | |
| TTCCAGCTCCGTGTGGAGGT+TGG | + | chr5.3:11873729-11873748 | None:intergenic | 60.0% | |
| ! | AGGAAGGGAGGCGGGAGTAT+GGG | - | chr5.3:11873049-11873068 | MS.gene02443:intron | 60.0% |
| ! | CGAGGAGAGGTGTGGCAAGT+AGG | - | chr5.3:11871951-11871970 | MS.gene02443:CDS | 60.0% |
| !! | CGACAGCCTCTAGGGTGAAC+CGG | + | chr5.3:11873125-11873144 | None:intergenic | 60.0% |
| !! | GAGTTGCCGGTTCAGAGCCA+AGG | - | chr5.3:11874048-11874067 | MS.gene02443:CDS | 60.0% |
| AGCCAACCTCCACACGGAGC+TGG | - | chr5.3:11873724-11873743 | MS.gene02443:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 11871890 | 11874365 | 11871890 | ID=MS.gene02443 |
| chr5.3 | mRNA | 11871890 | 11874365 | 11871890 | ID=MS.gene02443.t1;Parent=MS.gene02443 |
| chr5.3 | exon | 11874012 | 11874365 | 11874012 | ID=MS.gene02443.t1.exon1;Parent=MS.gene02443.t1 |
| chr5.3 | CDS | 11874012 | 11874365 | 11874012 | ID=cds.MS.gene02443.t1;Parent=MS.gene02443.t1 |
| chr5.3 | exon | 11873820 | 11873907 | 11873820 | ID=MS.gene02443.t1.exon2;Parent=MS.gene02443.t1 |
| chr5.3 | CDS | 11873820 | 11873907 | 11873820 | ID=cds.MS.gene02443.t1;Parent=MS.gene02443.t1 |
| chr5.3 | exon | 11872663 | 11872792 | 11872663 | ID=MS.gene02443.t1.exon3;Parent=MS.gene02443.t1 |
| chr5.3 | CDS | 11872663 | 11872792 | 11872663 | ID=cds.MS.gene02443.t1;Parent=MS.gene02443.t1 |
| chr5.3 | exon | 11871890 | 11872568 | 11871890 | ID=MS.gene02443.t1.exon4;Parent=MS.gene02443.t1 |
| chr5.3 | CDS | 11871890 | 11872568 | 11871890 | ID=cds.MS.gene02443.t1;Parent=MS.gene02443.t1 |
| Gene Sequence |
| Protein sequence |
