Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97282.t1 | XP_003621668.1 | 96.7 | 391 | 8 | 2 | 1 | 389 | 1 | 388 | 1.90E-218 | 768.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97282.t1 | Q9S9K4 | 44.4 | 372 | 193 | 8 | 22 | 390 | 22 | 382 | 3.7e-90 | 333.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97282.t1 | G7KTS2 | 96.7 | 391 | 8 | 2 | 1 | 389 | 1 | 388 | 1.3e-218 | 768.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene97282 | MS.gene025899 | PPI |
MS.gene97282 | MS.gene22706 | PPI |
MS.gene97282 | MS.gene024430 | PPI |
MS.gene050655 | MS.gene97282 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97282.t1 | MTR_7g021510 | 97.449 | 392 | 5 | 2 | 1 | 390 | 1 | 389 | 0.0 | 786 |
MS.gene97282.t1 | MTR_7g080230 | 52.344 | 384 | 175 | 5 | 9 | 389 | 7 | 385 | 1.74e-135 | 399 |
MS.gene97282.t1 | MTR_1g078240 | 51.955 | 358 | 165 | 2 | 27 | 384 | 26 | 376 | 1.82e-135 | 395 |
MS.gene97282.t1 | MTR_1g078240 | 51.955 | 358 | 165 | 2 | 27 | 384 | 26 | 376 | 1.43e-134 | 397 |
MS.gene97282.t1 | MTR_1g078240 | 51.955 | 358 | 165 | 2 | 27 | 384 | 26 | 376 | 1.68e-134 | 397 |
MS.gene97282.t1 | MTR_7g080230 | 51.701 | 294 | 136 | 3 | 99 | 389 | 25 | 315 | 5.49e-98 | 301 |
MS.gene97282.t1 | MTR_7g102750 | 36.029 | 408 | 235 | 8 | 1 | 389 | 1 | 401 | 1.27e-82 | 262 |
MS.gene97282.t1 | MTR_7g102750 | 35.784 | 408 | 236 | 8 | 1 | 389 | 1 | 401 | 3.79e-82 | 263 |
MS.gene97282.t1 | MTR_1g061940 | 34.988 | 403 | 240 | 8 | 5 | 390 | 9 | 406 | 7.69e-82 | 262 |
MS.gene97282.t1 | MTR_4g056420 | 34.772 | 394 | 241 | 6 | 9 | 389 | 6 | 396 | 2.03e-80 | 258 |
MS.gene97282.t1 | MTR_2g084550 | 37.913 | 393 | 224 | 8 | 12 | 389 | 10 | 397 | 1.67e-78 | 253 |
MS.gene97282.t1 | MTR_5g016260 | 27.941 | 408 | 243 | 14 | 1 | 384 | 1 | 381 | 1.37e-29 | 122 |
MS.gene97282.t1 | MTR_5g016260 | 27.941 | 408 | 243 | 14 | 1 | 384 | 1 | 381 | 1.99e-29 | 122 |
MS.gene97282.t1 | MTR_5g061690 | 30.938 | 320 | 187 | 13 | 71 | 377 | 97 | 395 | 3.03e-29 | 120 |
MS.gene97282.t1 | MTR_8g075010 | 32.979 | 282 | 156 | 11 | 67 | 336 | 91 | 351 | 2.41e-27 | 115 |
MS.gene97282.t1 | MTR_6g084710 | 27.624 | 362 | 193 | 14 | 62 | 390 | 180 | 505 | 7.19e-27 | 113 |
MS.gene97282.t1 | MTR_3g087780 | 28.254 | 315 | 197 | 11 | 75 | 378 | 99 | 395 | 1.17e-26 | 113 |
MS.gene97282.t1 | MTR_2g059460 | 29.355 | 310 | 183 | 11 | 76 | 372 | 60 | 346 | 3.09e-26 | 110 |
MS.gene97282.t1 | MTR_6g084710 | 27.654 | 358 | 190 | 14 | 62 | 386 | 180 | 501 | 6.38e-26 | 111 |
MS.gene97282.t1 | MTR_3g028120 | 30.897 | 301 | 182 | 11 | 43 | 335 | 59 | 341 | 8.94e-26 | 109 |
MS.gene97282.t1 | MTR_0036s0050 | 29.494 | 356 | 210 | 14 | 43 | 383 | 57 | 386 | 1.75e-25 | 108 |
MS.gene97282.t1 | MTR_5g022880 | 29.658 | 263 | 160 | 8 | 75 | 330 | 112 | 356 | 2.72e-25 | 108 |
MS.gene97282.t1 | MTR_8g075090 | 30.502 | 259 | 151 | 10 | 75 | 326 | 112 | 348 | 1.03e-24 | 107 |
MS.gene97282.t1 | MTR_8g075090 | 30.502 | 259 | 151 | 10 | 75 | 326 | 112 | 348 | 1.29e-24 | 106 |
MS.gene97282.t1 | MTR_8g075090 | 30.502 | 259 | 151 | 10 | 75 | 326 | 112 | 348 | 1.39e-24 | 107 |
MS.gene97282.t1 | MTR_3g097150 | 26.897 | 435 | 247 | 22 | 1 | 395 | 11 | 414 | 1.61e-24 | 106 |
MS.gene97282.t1 | MTR_5g080890 | 28.296 | 311 | 192 | 12 | 70 | 370 | 82 | 371 | 2.17e-24 | 105 |
MS.gene97282.t1 | MTR_4g095270 | 27.554 | 323 | 194 | 13 | 74 | 384 | 79 | 373 | 8.08e-24 | 105 |
MS.gene97282.t1 | MTR_4g095270 | 27.554 | 323 | 194 | 13 | 74 | 384 | 79 | 373 | 8.48e-24 | 105 |
MS.gene97282.t1 | MTR_2g028190 | 30.211 | 331 | 183 | 16 | 74 | 383 | 101 | 404 | 1.21e-23 | 103 |
MS.gene97282.t1 | MTR_8g094590 | 28.108 | 370 | 208 | 15 | 43 | 386 | 38 | 375 | 1.39e-23 | 103 |
MS.gene97282.t1 | MTR_8g094590 | 28.108 | 370 | 208 | 15 | 43 | 386 | 38 | 375 | 1.97e-23 | 102 |
MS.gene97282.t1 | MTR_5g080960 | 28.296 | 311 | 192 | 12 | 70 | 370 | 82 | 371 | 2.35e-23 | 102 |
MS.gene97282.t1 | MTR_5g038360 | 29.885 | 261 | 159 | 8 | 76 | 329 | 89 | 332 | 2.96e-23 | 102 |
MS.gene97282.t1 | MTR_8g038280 | 29.973 | 367 | 204 | 22 | 31 | 379 | 51 | 382 | 6.69e-23 | 101 |
MS.gene97282.t1 | MTR_0221s0060 | 35.115 | 131 | 84 | 1 | 72 | 202 | 6 | 135 | 1.20e-22 | 94.0 |
MS.gene97282.t1 | MTR_8g094590 | 29.900 | 301 | 166 | 13 | 43 | 330 | 38 | 306 | 1.55e-22 | 98.2 |
MS.gene97282.t1 | MTR_2g059490 | 30.855 | 269 | 158 | 12 | 76 | 333 | 59 | 310 | 4.40e-22 | 99.0 |
MS.gene97282.t1 | MTR_4g007740 | 27.056 | 377 | 227 | 15 | 38 | 399 | 99 | 442 | 5.96e-22 | 99.0 |
MS.gene97282.t1 | MTR_3g096930 | 30.714 | 280 | 155 | 13 | 58 | 330 | 69 | 316 | 6.29e-22 | 98.6 |
MS.gene97282.t1 | MTR_1g115210 | 26.650 | 409 | 238 | 16 | 16 | 401 | 90 | 459 | 8.05e-22 | 98.6 |
MS.gene97282.t1 | MTR_5g072060 | 41.358 | 162 | 84 | 7 | 135 | 290 | 364 | 520 | 8.41e-22 | 99.0 |
MS.gene97282.t1 | MTR_0036s0070 | 27.566 | 341 | 200 | 14 | 43 | 369 | 57 | 364 | 1.75e-21 | 97.1 |
MS.gene97282.t1 | MTR_5g008070 | 27.410 | 332 | 205 | 12 | 74 | 392 | 80 | 388 | 1.94e-21 | 96.7 |
MS.gene97282.t1 | MTR_3g053710 | 26.667 | 345 | 199 | 14 | 74 | 396 | 116 | 428 | 2.11e-21 | 97.1 |
MS.gene97282.t1 | MTR_6g085010 | 28.808 | 302 | 177 | 12 | 76 | 369 | 157 | 428 | 1.69e-20 | 94.4 |
MS.gene97282.t1 | MTR_4g023650 | 28.159 | 277 | 175 | 9 | 55 | 326 | 43 | 300 | 2.28e-20 | 93.6 |
MS.gene97282.t1 | MTR_8g096990 | 27.273 | 330 | 187 | 12 | 70 | 379 | 82 | 378 | 1.04e-19 | 91.7 |
MS.gene97282.t1 | MTR_4g045857 | 28.800 | 250 | 145 | 8 | 76 | 312 | 59 | 288 | 1.40e-19 | 89.4 |
MS.gene97282.t1 | MTR_7g062360 | 27.365 | 296 | 171 | 10 | 78 | 355 | 62 | 331 | 2.92e-19 | 90.5 |
MS.gene97282.t1 | MTR_5g044770 | 28.349 | 321 | 187 | 15 | 74 | 379 | 85 | 377 | 3.25e-19 | 90.1 |
MS.gene97282.t1 | MTR_5g091130 | 26.549 | 339 | 203 | 11 | 74 | 387 | 190 | 507 | 3.48e-19 | 90.9 |
MS.gene97282.t1 | MTR_0024s0040 | 29.290 | 338 | 209 | 14 | 43 | 370 | 31 | 348 | 1.44e-18 | 88.2 |
MS.gene97282.t1 | MTR_3g046300 | 26.444 | 329 | 214 | 11 | 74 | 387 | 96 | 411 | 1.67e-18 | 88.2 |
MS.gene97282.t1 | MTR_0036s0110 | 28.212 | 358 | 210 | 17 | 40 | 385 | 71 | 393 | 1.93e-18 | 87.8 |
MS.gene97282.t1 | MTR_1g039270 | 24.716 | 352 | 219 | 13 | 67 | 401 | 120 | 442 | 2.57e-18 | 87.8 |
MS.gene97282.t1 | MTR_7g117430 | 27.829 | 327 | 188 | 16 | 74 | 383 | 140 | 435 | 3.04e-18 | 87.4 |
MS.gene97282.t1 | MTR_5g061690 | 28.839 | 267 | 162 | 11 | 119 | 377 | 10 | 256 | 3.54e-18 | 86.7 |
MS.gene97282.t1 | MTR_4g023630 | 27.869 | 305 | 180 | 14 | 55 | 348 | 43 | 318 | 1.40e-17 | 85.1 |
MS.gene97282.t1 | MTR_0050s0050 | 47.191 | 89 | 45 | 1 | 116 | 204 | 2 | 88 | 1.57e-17 | 80.9 |
MS.gene97282.t1 | MTR_1g029810 | 29.057 | 265 | 161 | 10 | 73 | 333 | 55 | 296 | 1.93e-17 | 84.7 |
MS.gene97282.t1 | MTR_1g029810 | 29.057 | 265 | 161 | 10 | 73 | 333 | 55 | 296 | 2.43e-17 | 84.7 |
MS.gene97282.t1 | MTR_5g008110 | 26.433 | 314 | 184 | 14 | 73 | 369 | 65 | 348 | 6.75e-17 | 83.2 |
MS.gene97282.t1 | MTR_5g044570 | 26.234 | 385 | 186 | 16 | 3 | 344 | 1 | 330 | 1.74e-16 | 81.6 |
MS.gene97282.t1 | MTR_5g008150 | 26.708 | 322 | 193 | 16 | 73 | 379 | 61 | 354 | 3.96e-16 | 80.5 |
MS.gene97282.t1 | MTR_3g087780 | 26.217 | 267 | 172 | 9 | 119 | 378 | 5 | 253 | 7.30e-16 | 79.7 |
MS.gene97282.t1 | MTR_4g109760 | 28.621 | 290 | 171 | 13 | 94 | 370 | 73 | 339 | 9.03e-16 | 79.3 |
MS.gene97282.t1 | MTR_3g087780 | 26.217 | 267 | 172 | 9 | 119 | 378 | 41 | 289 | 1.26e-15 | 79.3 |
MS.gene97282.t1 | MTR_1g111350 | 24.929 | 353 | 212 | 13 | 67 | 401 | 123 | 440 | 1.55e-15 | 79.0 |
MS.gene97282.t1 | MTR_3g053980 | 26.769 | 325 | 199 | 13 | 74 | 386 | 141 | 438 | 9.65e-15 | 76.6 |
MS.gene97282.t1 | MTR_3g068000 | 25.962 | 312 | 183 | 13 | 82 | 370 | 80 | 366 | 1.45e-14 | 76.3 |
MS.gene97282.t1 | MTR_2g067830 | 26.048 | 334 | 210 | 15 | 73 | 390 | 55 | 367 | 3.42e-14 | 74.7 |
MS.gene97282.t1 | MTR_2g105300 | 25.633 | 316 | 198 | 15 | 91 | 390 | 51 | 345 | 5.19e-14 | 73.9 |
MS.gene97282.t1 | MTR_8g039540 | 25.000 | 420 | 244 | 18 | 1 | 386 | 1 | 383 | 6.77e-14 | 73.9 |
MS.gene97282.t1 | MTR_3g014290 | 27.329 | 322 | 184 | 16 | 76 | 385 | 81 | 364 | 7.55e-14 | 73.6 |
MS.gene97282.t1 | MTR_1g037630 | 27.554 | 323 | 182 | 17 | 76 | 385 | 93 | 376 | 1.40e-13 | 72.8 |
MS.gene97282.t1 | MTR_7g105850 | 24.571 | 350 | 199 | 16 | 72 | 384 | 87 | 408 | 1.56e-13 | 72.8 |
MS.gene97282.t1 | MTR_3g006820 | 24.825 | 286 | 176 | 11 | 55 | 330 | 42 | 298 | 1.75e-13 | 72.4 |
MS.gene97282.t1 | MTR_2g063110 | 24.074 | 378 | 198 | 15 | 67 | 383 | 110 | 459 | 1.95e-13 | 72.8 |
MS.gene97282.t1 | MTR_6g090290 | 25.723 | 311 | 197 | 12 | 74 | 370 | 85 | 375 | 6.76e-13 | 70.9 |
MS.gene97282.t1 | MTR_2g070430 | 23.117 | 385 | 241 | 15 | 27 | 380 | 39 | 399 | 7.51e-13 | 70.9 |
MS.gene97282.t1 | MTR_2g055840 | 23.988 | 321 | 192 | 12 | 76 | 372 | 14 | 306 | 3.45e-12 | 68.2 |
MS.gene97282.t1 | MTR_8g038310 | 24.621 | 264 | 148 | 9 | 74 | 326 | 86 | 309 | 7.36e-12 | 67.4 |
MS.gene97282.t1 | MTR_3g065160 | 23.940 | 401 | 227 | 18 | 4 | 377 | 20 | 369 | 2.45e-11 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene97282.t1 | AT1G05840 | 68.528 | 394 | 119 | 3 | 11 | 402 | 16 | 406 | 0.0 | 554 |
MS.gene97282.t1 | AT3G02740 | 49.749 | 398 | 184 | 8 | 2 | 390 | 5 | 395 | 1.23e-134 | 397 |
MS.gene97282.t1 | AT3G02740 | 52.978 | 319 | 140 | 6 | 75 | 390 | 9 | 320 | 3.66e-115 | 345 |
MS.gene97282.t1 | AT5G36260 | 44.562 | 377 | 199 | 5 | 27 | 400 | 30 | 399 | 1.30e-114 | 346 |
MS.gene97282.t1 | AT1G65240 | 44.236 | 373 | 194 | 8 | 21 | 390 | 21 | 382 | 1.75e-110 | 335 |
MS.gene97282.t1 | AT5G22850 | 36.935 | 398 | 236 | 6 | 6 | 390 | 6 | 401 | 2.88e-83 | 266 |
MS.gene97282.t1 | AT2G36670 | 36.483 | 381 | 221 | 5 | 27 | 389 | 41 | 418 | 8.24e-82 | 262 |
MS.gene97282.t1 | AT2G36670 | 36.010 | 386 | 221 | 6 | 27 | 389 | 41 | 423 | 1.67e-79 | 256 |
MS.gene97282.t1 | AT2G36670 | 37.461 | 323 | 191 | 4 | 75 | 389 | 33 | 352 | 1.33e-73 | 239 |
MS.gene97282.t1 | AT2G36670 | 37.461 | 323 | 191 | 4 | 75 | 389 | 33 | 352 | 1.33e-73 | 239 |
MS.gene97282.t1 | AT1G08210 | 35.696 | 395 | 238 | 6 | 7 | 389 | 10 | 400 | 3.97e-73 | 239 |
MS.gene97282.t1 | AT1G08210 | 33.260 | 457 | 282 | 8 | 7 | 446 | 10 | 460 | 6.56e-73 | 239 |
MS.gene97282.t1 | AT1G08210 | 35.696 | 395 | 238 | 6 | 7 | 389 | 58 | 448 | 6.65e-73 | 240 |
MS.gene97282.t1 | AT1G08210 | 35.696 | 395 | 238 | 6 | 7 | 389 | 44 | 434 | 6.84e-73 | 239 |
MS.gene97282.t1 | AT2G17760 | 31.385 | 325 | 188 | 13 | 67 | 378 | 94 | 396 | 1.29e-30 | 124 |
MS.gene97282.t1 | AT5G43100 | 27.692 | 325 | 195 | 12 | 72 | 384 | 72 | 368 | 7.14e-29 | 120 |
MS.gene97282.t1 | AT5G43100 | 27.692 | 325 | 195 | 12 | 72 | 384 | 72 | 368 | 8.58e-29 | 119 |
MS.gene97282.t1 | AT4G33490 | 28.571 | 406 | 225 | 16 | 1 | 387 | 1 | 360 | 2.71e-28 | 116 |
MS.gene97282.t1 | AT4G33490 | 28.571 | 406 | 225 | 16 | 1 | 387 | 4 | 363 | 2.80e-28 | 116 |
MS.gene97282.t1 | AT5G10080 | 27.053 | 414 | 246 | 17 | 9 | 384 | 8 | 403 | 1.12e-27 | 116 |
MS.gene97282.t1 | AT4G35880 | 31.295 | 278 | 162 | 11 | 67 | 336 | 97 | 353 | 2.10e-27 | 114 |
MS.gene97282.t1 | AT4G35880 | 31.655 | 278 | 161 | 11 | 67 | 336 | 97 | 353 | 3.28e-27 | 114 |
MS.gene97282.t1 | AT3G12700 | 28.080 | 349 | 214 | 15 | 52 | 383 | 83 | 411 | 1.18e-26 | 112 |
MS.gene97282.t1 | AT3G50050 | 28.793 | 323 | 191 | 13 | 74 | 384 | 91 | 386 | 3.14e-26 | 112 |
MS.gene97282.t1 | AT1G49050 | 31.250 | 288 | 171 | 13 | 62 | 341 | 191 | 459 | 1.09e-25 | 109 |
MS.gene97282.t1 | AT2G35615 | 29.288 | 379 | 216 | 18 | 27 | 379 | 40 | 392 | 5.94e-25 | 107 |
MS.gene97282.t1 | AT1G49050 | 31.408 | 277 | 163 | 13 | 62 | 330 | 191 | 448 | 7.96e-25 | 108 |
MS.gene97282.t1 | AT3G20015 | 29.532 | 342 | 200 | 15 | 74 | 401 | 129 | 443 | 1.91e-23 | 103 |
MS.gene97282.t1 | AT2G03200 | 27.893 | 337 | 185 | 17 | 74 | 383 | 105 | 410 | 1.12e-22 | 100 |
MS.gene97282.t1 | AT3G51360 | 26.957 | 345 | 207 | 13 | 73 | 396 | 2 | 322 | 1.26e-22 | 100 |
MS.gene97282.t1 | AT3G25700 | 26.934 | 349 | 222 | 12 | 67 | 393 | 75 | 412 | 2.46e-22 | 99.8 |
MS.gene97282.t1 | AT3G51360 | 27.114 | 343 | 205 | 13 | 75 | 396 | 98 | 416 | 2.73e-22 | 100 |
MS.gene97282.t1 | AT1G49050 | 30.682 | 264 | 158 | 12 | 75 | 330 | 29 | 275 | 3.13e-22 | 99.0 |
MS.gene97282.t1 | AT3G51360 | 27.114 | 343 | 205 | 13 | 75 | 396 | 88 | 406 | 3.46e-22 | 99.8 |
MS.gene97282.t1 | AT3G51360 | 27.937 | 315 | 192 | 11 | 75 | 378 | 98 | 388 | 3.82e-22 | 99.0 |
MS.gene97282.t1 | AT3G51360 | 26.741 | 359 | 218 | 13 | 75 | 412 | 98 | 432 | 3.83e-22 | 99.0 |
MS.gene97282.t1 | AT3G51360 | 26.741 | 359 | 218 | 13 | 75 | 412 | 88 | 422 | 4.18e-22 | 99.0 |
MS.gene97282.t1 | AT1G44130 | 27.089 | 347 | 206 | 14 | 58 | 386 | 33 | 350 | 4.56e-22 | 98.6 |
MS.gene97282.t1 | AT3G54400 | 28.750 | 320 | 186 | 15 | 76 | 386 | 88 | 374 | 6.17e-22 | 98.2 |
MS.gene97282.t1 | AT3G51360 | 27.937 | 315 | 192 | 11 | 75 | 378 | 88 | 378 | 6.56e-22 | 97.8 |
MS.gene97282.t1 | AT1G31450 | 29.573 | 328 | 189 | 14 | 74 | 379 | 83 | 390 | 1.88e-21 | 97.1 |
MS.gene97282.t1 | AT2G23945 | 28.344 | 314 | 190 | 13 | 75 | 377 | 95 | 384 | 2.94e-21 | 96.7 |
MS.gene97282.t1 | AT4G30030 | 25.532 | 376 | 249 | 12 | 8 | 377 | 13 | 363 | 7.80e-20 | 92.0 |
MS.gene97282.t1 | AT3G61820 | 25.796 | 314 | 196 | 10 | 74 | 372 | 133 | 424 | 8.79e-20 | 92.4 |
MS.gene97282.t1 | AT3G51360 | 28.464 | 267 | 159 | 10 | 75 | 333 | 98 | 340 | 2.59e-19 | 89.7 |
MS.gene97282.t1 | AT4G30040 | 24.534 | 322 | 197 | 10 | 76 | 377 | 85 | 380 | 4.13e-19 | 89.7 |
MS.gene97282.t1 | AT3G18490 | 28.451 | 355 | 200 | 14 | 67 | 401 | 153 | 473 | 1.15e-18 | 89.0 |
MS.gene97282.t1 | AT5G10770 | 28.247 | 308 | 187 | 12 | 74 | 372 | 130 | 412 | 2.38e-18 | 87.8 |
MS.gene97282.t1 | AT1G77480 | 25.333 | 375 | 237 | 14 | 27 | 386 | 24 | 370 | 3.79e-18 | 87.0 |
MS.gene97282.t1 | AT3G59080 | 25.356 | 351 | 215 | 11 | 74 | 404 | 168 | 491 | 5.73e-18 | 87.0 |
MS.gene97282.t1 | AT1G79720 | 27.508 | 309 | 178 | 12 | 87 | 377 | 144 | 424 | 8.47e-18 | 86.3 |
MS.gene97282.t1 | AT1G77480 | 25.333 | 375 | 237 | 14 | 27 | 386 | 24 | 370 | 8.76e-18 | 86.3 |
MS.gene97282.t1 | AT1G64830 | 28.896 | 308 | 190 | 12 | 74 | 372 | 84 | 371 | 1.35e-17 | 85.5 |
MS.gene97282.t1 | AT2G42980 | 25.862 | 348 | 219 | 11 | 74 | 404 | 158 | 483 | 3.71e-17 | 84.3 |
MS.gene97282.t1 | AT1G01300 | 25.075 | 335 | 187 | 15 | 74 | 383 | 140 | 435 | 5.14e-17 | 84.0 |
MS.gene97282.t1 | AT3G51340 | 24.068 | 295 | 189 | 9 | 75 | 353 | 102 | 377 | 6.84e-17 | 82.8 |
MS.gene97282.t1 | AT3G51340 | 27.556 | 225 | 145 | 6 | 75 | 291 | 102 | 316 | 9.64e-17 | 82.4 |
MS.gene97282.t1 | AT3G51340 | 27.556 | 225 | 145 | 6 | 75 | 291 | 102 | 316 | 1.09e-16 | 83.2 |
MS.gene97282.t1 | AT3G51340 | 27.556 | 225 | 145 | 6 | 75 | 291 | 102 | 316 | 1.63e-16 | 82.4 |
MS.gene97282.t1 | AT3G51350 | 27.434 | 226 | 144 | 8 | 75 | 291 | 101 | 315 | 2.24e-16 | 82.0 |
MS.gene97282.t1 | AT5G10760 | 23.977 | 342 | 220 | 12 | 37 | 369 | 92 | 402 | 3.96e-16 | 80.9 |
MS.gene97282.t1 | AT1G25510 | 25.153 | 326 | 207 | 10 | 67 | 384 | 139 | 435 | 4.98e-16 | 80.9 |
MS.gene97282.t1 | AT3G51330 | 26.524 | 328 | 203 | 15 | 75 | 388 | 101 | 404 | 1.47e-15 | 79.3 |
MS.gene97282.t1 | AT3G51330 | 26.524 | 328 | 203 | 15 | 75 | 388 | 101 | 404 | 1.70e-15 | 79.0 |
MS.gene97282.t1 | AT3G51330 | 26.524 | 328 | 203 | 15 | 75 | 388 | 101 | 404 | 1.71e-15 | 79.3 |
MS.gene97282.t1 | AT3G52500 | 25.714 | 350 | 197 | 13 | 72 | 383 | 86 | 410 | 2.70e-15 | 78.6 |
MS.gene97282.t1 | AT3G42550 | 34.454 | 119 | 60 | 3 | 74 | 187 | 76 | 181 | 1.19e-14 | 76.3 |
MS.gene97282.t1 | AT1G66180 | 25.993 | 277 | 157 | 10 | 80 | 336 | 76 | 324 | 1.28e-14 | 76.3 |
MS.gene97282.t1 | AT1G09750 | 27.044 | 318 | 190 | 15 | 73 | 377 | 101 | 389 | 2.25e-14 | 75.5 |
MS.gene97282.t1 | AT3G51360 | 26.102 | 295 | 179 | 11 | 118 | 396 | 9 | 280 | 1.03e-13 | 72.8 |
MS.gene97282.t1 | AT3G51360 | 26.102 | 295 | 179 | 11 | 118 | 396 | 9 | 280 | 1.03e-13 | 72.8 |
MS.gene97282.t1 | AT5G07030 | 27.726 | 321 | 188 | 17 | 76 | 385 | 115 | 402 | 1.43e-13 | 73.2 |
MS.gene97282.t1 | AT2G28010 | 25.402 | 311 | 181 | 13 | 75 | 375 | 64 | 333 | 4.40e-13 | 71.2 |
MS.gene97282.t1 | AT2G28225 | 26.861 | 309 | 183 | 17 | 75 | 375 | 66 | 339 | 4.95e-13 | 71.2 |
MS.gene97282.t1 | AT5G33340 | 27.687 | 307 | 193 | 12 | 74 | 370 | 88 | 375 | 7.58e-13 | 70.9 |
MS.gene97282.t1 | AT5G02190 | 24.812 | 266 | 166 | 10 | 85 | 336 | 82 | 327 | 1.82e-12 | 69.7 |
MS.gene97282.t1 | AT3G25700 | 31.034 | 145 | 91 | 4 | 67 | 209 | 75 | 212 | 1.96e-11 | 65.9 |
MS.gene97282.t1 | AT2G28030 | 25.962 | 312 | 178 | 16 | 75 | 375 | 60 | 329 | 3.36e-11 | 65.5 |
Find 104 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GACCTTGAAAATCAGGTTAT+TGG | 0.154528 | 7.3:-78200137 | MS.gene97282:CDS |
GCTAATGGAAGTGTTATATT+TGG | 0.167832 | 7.3:-78205510 | MS.gene97282:CDS |
AGGCTTTATTATGCGAAAAT+TGG | 0.187425 | 7.3:-78207204 | MS.gene97282:CDS |
TATACATGCTTTCAATATTC+TGG | 0.202777 | 7.3:-78202803 | MS.gene97282:CDS |
ATGTTTGCTCATTGCTTAAA+TGG | 0.204920 | 7.3:-78203824 | MS.gene97282:CDS |
GAGCTATGCAAAGAGATAAA+TGG | 0.254181 | 7.3:-78205678 | MS.gene97282:CDS |
AACAGTTACCCAACGGAATC+AGG | 0.288793 | 7.3:+78207463 | None:intergenic |
TATTATTTGCAAGTGGATAC+TGG | 0.306830 | 7.3:-78207159 | MS.gene97282:CDS |
TCAAAATAAAAGGTGACATT+TGG | 0.307429 | 7.3:+78201549 | None:intergenic |
CATTGCTTAAATGGAGTAAA+TGG | 0.311727 | 7.3:-78203815 | MS.gene97282:CDS |
ATGCATCTGTTGAGAGATTA+AGG | 0.311890 | 7.3:+78203043 | None:intergenic |
TAATGATTCCTGTCCATATC+TGG | 0.313898 | 7.3:-78205625 | MS.gene97282:CDS |
CTTAAAACTGCTTCAGCTAA+TGG | 0.313905 | 7.3:-78205525 | MS.gene97282:CDS |
CTTGATGGGATACTTGGATT+TGG | 0.329509 | 7.3:-78203902 | MS.gene97282:CDS |
CTATCAGCCATTAGTATATA+AGG | 0.334902 | 7.3:-78202950 | MS.gene97282:intron |
TATTATGCGAAAATTGGAAT+TGG | 0.344165 | 7.3:-78207198 | MS.gene97282:CDS |
GACGACACAGAGATGCTCTT+TGG | 0.359722 | 7.3:-78198555 | MS.gene97282:CDS |
TCACCATATATCTCCAGATA+TGG | 0.375783 | 7.3:+78205612 | None:intergenic |
TGTCCATATCTGGAGATATA+TGG | 0.378802 | 7.3:-78205615 | MS.gene97282:CDS |
TTGAGAGATTAAGGAAAGTA+TGG | 0.379252 | 7.3:+78203052 | None:intergenic |
AGCTATGCAAAGAGATAAAT+GGG | 0.381997 | 7.3:-78205677 | MS.gene97282:CDS |
CTAATGGAAGTGTTATATTT+GGG | 0.387256 | 7.3:-78205509 | MS.gene97282:intron |
GAAGCGCTTGATGGGATACT+TGG | 0.391907 | 7.3:-78203908 | MS.gene97282:CDS |
TTGTATACCTTATATACTAA+TGG | 0.394050 | 7.3:+78202943 | None:intergenic |
ACCGGCGTCGACCTTCCTTT+AGG | 0.402449 | 7.3:-78207499 | MS.gene97282:CDS |
TGCAAATAATAATCCTTTGA+CGG | 0.409086 | 7.3:+78207171 | None:intergenic |
ACGACACAGAGATGCTCTTT+GGG | 0.411117 | 7.3:-78198554 | MS.gene97282:CDS |
ATTTCACAACTTTCTTCCTC+TGG | 0.412257 | 7.3:-78203860 | MS.gene97282:CDS |
ATAGATCCCGTCTGGTAGAT+AGG | 0.419699 | 7.3:+78202969 | None:intergenic |
TGAAAATGGACTCTCCTTGA+AGG | 0.420116 | 7.3:-78201529 | MS.gene97282:CDS |
AACATAAAGGAATCTTCTTC+TGG | 0.424248 | 7.3:-78205723 | MS.gene97282:CDS |
TGCTACGGCATCAGAGGATA+AGG | 0.428738 | 7.3:-78198621 | MS.gene97282:CDS |
GTACTATTTGATCAAGTGTC+CGG | 0.440924 | 7.3:-78205552 | MS.gene97282:CDS |
TCTTACGCTCTACAACATAA+AGG | 0.458427 | 7.3:-78205736 | MS.gene97282:CDS |
GGGCGGCCTGTGCCGCCTAA+AGG | 0.459901 | 7.3:+78207484 | None:intergenic |
GACCTTCCTTTAGGCGGCAC+AGG | 0.485141 | 7.3:-78207490 | MS.gene97282:CDS |
TCAAACGAAGAAGCGCTTGA+TGG | 0.488151 | 7.3:-78203917 | MS.gene97282:CDS |
TACTATTTGATCAAGTGTCC+GGG | 0.497694 | 7.3:-78205551 | MS.gene97282:CDS |
CACTGCAGGTTACTTTGTAA+AGG | 0.500888 | 7.3:-78205580 | MS.gene97282:CDS |
TAAACAAATACATACTGGTC+AGG | 0.506509 | 7.3:+78203731 | None:intergenic |
ACAGGCCGCCCTGATTCCGT+TGG | 0.506586 | 7.3:-78207472 | MS.gene97282:CDS |
CAGGCCGCCCTGATTCCGTT+GGG | 0.508270 | 7.3:-78207471 | MS.gene97282:intron |
TTATGCTGCAGTGTTGATGA+TGG | 0.516485 | 7.3:-78201576 | MS.gene97282:intron |
CTGAACAAAGAGACAGTAAA+GGG | 0.516859 | 7.3:-78203020 | MS.gene97282:CDS |
AGGTGTGGTGCTAGACAATC+TGG | 0.516990 | 7.3:-78203953 | MS.gene97282:CDS |
GAAGGTCGACGCCGGTGAGA+AGG | 0.521960 | 7.3:+78207506 | None:intergenic |
TTGAAAATCAGGTTATTGGA+TGG | 0.523428 | 7.3:-78200133 | MS.gene97282:CDS |
AATGGCTGATAGATCCCGTC+TGG | 0.526184 | 7.3:+78202961 | None:intergenic |
ATCGTGTGGATAAACCTTCA+AGG | 0.526209 | 7.3:+78201515 | None:intergenic |
ACATACTGGTCAGGTAATAA+CGG | 0.533478 | 7.3:+78203740 | None:intergenic |
AAGGTCGACGCCGGTGAGAA+GGG | 0.534058 | 7.3:+78207507 | None:intergenic |
CAAACGAAGAAGCGCTTGAT+GGG | 0.535187 | 7.3:-78203916 | MS.gene97282:CDS |
CGGTGAGAAGGGAGATTTGA+CGG | 0.536184 | 7.3:+78207518 | None:intergenic |
GACGTTGAAAACGCCGTGGT+TGG | 0.542270 | 7.3:+78207603 | None:intergenic |
GTTGAAAACGCCGTGGTTGG+CGG | 0.542382 | 7.3:+78207606 | None:intergenic |
TGGAATTGGAACTCCGTCAA+AGG | 0.546019 | 7.3:-78207184 | MS.gene97282:CDS |
ATATATCTCCAGATATGGAC+AGG | 0.546608 | 7.3:+78205617 | None:intergenic |
GCTACGGCATCAGAGGATAA+GGG | 0.548027 | 7.3:-78198620 | MS.gene97282:CDS |
ACACCAAGGTTACTTCTAGT+AGG | 0.550642 | 7.3:+78207093 | None:intergenic |
GGAGGTGGTATATTTGCGAT+TGG | 0.555006 | 7.3:-78203794 | MS.gene97282:CDS |
GAAAGCATGTATACTCGTCA+TGG | 0.560971 | 7.3:+78202813 | None:intergenic |
GGTGATGGCAGCTCCACTGC+AGG | 0.561770 | 7.3:-78205594 | MS.gene97282:CDS |
AAAGGATTATTATTTGCAAG+TGG | 0.565196 | 7.3:-78207166 | MS.gene97282:CDS |
CATGCTTTCAATATTCTGGA+AGG | 0.569785 | 7.3:-78202799 | MS.gene97282:intron |
GAGAGAACGTTGTTGATCAT+CGG | 0.571559 | 7.3:+78207567 | None:intergenic |
AACATGACAGCGATTCAAGT+TGG | 0.572363 | 7.3:-78203075 | MS.gene97282:CDS |
CCCGTCTGGTAGATAGGCCA+AGG | 0.572658 | 7.3:+78202975 | None:intergenic |
TGTGTCGTCGTGCCACGACG+TGG | 0.579745 | 7.3:+78198569 | None:intergenic |
AGTACGCTTGTAGAAATACA+TGG | 0.581981 | 7.3:-78198658 | MS.gene97282:CDS |
ACAGTTACCCAACGGAATCA+GGG | 0.582244 | 7.3:+78207464 | None:intergenic |
TATCCTCTGATGCCGTAGCA+CGG | 0.583808 | 7.3:+78198624 | None:intergenic |
GATCATCGGAGAATTTGTAC+TGG | 0.584856 | 7.3:+78207581 | None:intergenic |
GGCCTGTGCCGCCTAAAGGA+AGG | 0.586798 | 7.3:+78207488 | None:intergenic |
TTAAATGGAGTAAATGGAGG+TGG | 0.590871 | 7.3:-78203809 | MS.gene97282:CDS |
AACGGAGTTGTGTTCACTGT+AGG | 0.594168 | 7.3:+78203758 | None:intergenic |
CTTTACAAAGTAACCTGCAG+TGG | 0.595178 | 7.3:+78205581 | None:intergenic |
TCTGAACAAAGAGACAGTAA+AGG | 0.603889 | 7.3:-78203021 | MS.gene97282:CDS |
AATTGACAGTGGTACAACCT+TGG | 0.604621 | 7.3:-78202992 | MS.gene97282:CDS |
ACCTTGGCCTATCTACCAGA+CGG | 0.608325 | 7.3:-78202976 | MS.gene97282:CDS |
GATCTCTACGCACCGTGCTA+CGG | 0.610504 | 7.3:-78198636 | MS.gene97282:CDS |
TGTCCTACTAGAAGTAACCT+TGG | 0.614346 | 7.3:-78207096 | MS.gene97282:CDS |
GTGTCGTCGTGCCACGACGT+GGG | 0.615271 | 7.3:+78198570 | None:intergenic |
GGCGTCGACCTTCCTTTAGG+CGG | 0.615962 | 7.3:-78207496 | MS.gene97282:CDS |
GCCTAAAGGAAGGTCGACGC+CGG | 0.616103 | 7.3:+78207498 | None:intergenic |
CGTCAAATCTCCCTTCTCAC+CGG | 0.619881 | 7.3:-78207517 | MS.gene97282:CDS |
CCTTGGCCTATCTACCAGAC+GGG | 0.625442 | 7.3:-78202975 | MS.gene97282:CDS |
TCTACTGTTTCCGCCAACCA+CGG | 0.626629 | 7.3:-78207616 | MS.gene97282:CDS |
TTGCATAGCTCTTGATCACA+CGG | 0.629761 | 7.3:+78205690 | None:intergenic |
TATCTGGAGATATATGGTGA+TGG | 0.634106 | 7.3:-78205609 | MS.gene97282:CDS |
GAAAGAAACAAATAATCGTG+TGG | 0.635029 | 7.3:+78201501 | None:intergenic |
GCACCGTGCTACGGCATCAG+AGG | 0.635791 | 7.3:-78198627 | MS.gene97282:CDS |
GTCATGTTGACACTGTAATG+TGG | 0.635815 | 7.3:+78203090 | None:intergenic |
TACTGGAACTGATATGATGT+GGG | 0.640658 | 7.3:-78207142 | MS.gene97282:CDS |
TGCTTAAATGGAGTAAATGG+AGG | 0.650674 | 7.3:-78203812 | MS.gene97282:CDS |
AAGACTCTCTTCCCACGTCG+TGG | 0.653779 | 7.3:-78198581 | MS.gene97282:CDS |
GTAGTCATGAGCTTTGAGAA+CGG | 0.656404 | 7.3:+78207543 | None:intergenic |
ACTATTTGATCAAGTGTCCG+GGG | 0.681013 | 7.3:-78205550 | MS.gene97282:CDS |
ATACTGGAACTGATATGATG+TGG | 0.690963 | 7.3:-78207143 | MS.gene97282:CDS |
CTATGCAAAGAGATAAATGG+GGG | 0.711671 | 7.3:-78205675 | MS.gene97282:CDS |
AAAGGGACAATAATTGACAG+TGG | 0.722747 | 7.3:-78203003 | MS.gene97282:CDS |
GTTACCCAACGGAATCAGGG+CGG | 0.750063 | 7.3:+78207467 | None:intergenic |
ACTGGACGTTGAAAACGCCG+TGG | 0.750088 | 7.3:+78207599 | None:intergenic |
GCTATGCAAAGAGATAAATG+GGG | 0.750434 | 7.3:-78205676 | MS.gene97282:CDS |
TGAGAAGGGAGATTTGACGG+CGG | 0.816902 | 7.3:+78207521 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 78198507 | 78207692 | 78198507 | ID=MS.gene97282 |
chr7.3 | mRNA | 78198507 | 78207692 | 78198507 | ID=MS.gene97282.t1;Parent=MS.gene97282 |
chr7.3 | exon | 78207472 | 78207692 | 78207472 | ID=MS.gene97282.t1.exon1;Parent=MS.gene97282.t1 |
chr7.3 | CDS | 78207472 | 78207692 | 78207472 | ID=cds.MS.gene97282.t1;Parent=MS.gene97282.t1 |
chr7.3 | exon | 78207095 | 78207224 | 78207095 | ID=MS.gene97282.t1.exon2;Parent=MS.gene97282.t1 |
chr7.3 | CDS | 78207095 | 78207224 | 78207095 | ID=cds.MS.gene97282.t1;Parent=MS.gene97282.t1 |
chr7.3 | exon | 78205510 | 78205763 | 78205510 | ID=MS.gene97282.t1.exon3;Parent=MS.gene97282.t1 |
chr7.3 | CDS | 78205510 | 78205763 | 78205510 | ID=cds.MS.gene97282.t1;Parent=MS.gene97282.t1 |
chr7.3 | exon | 78203746 | 78203973 | 78203746 | ID=MS.gene97282.t1.exon4;Parent=MS.gene97282.t1 |
chr7.3 | CDS | 78203746 | 78203973 | 78203746 | ID=cds.MS.gene97282.t1;Parent=MS.gene97282.t1 |
chr7.3 | exon | 78202951 | 78203113 | 78202951 | ID=MS.gene97282.t1.exon5;Parent=MS.gene97282.t1 |
chr7.3 | CDS | 78202951 | 78203113 | 78202951 | ID=cds.MS.gene97282.t1;Parent=MS.gene97282.t1 |
chr7.3 | exon | 78202800 | 78202873 | 78202800 | ID=MS.gene97282.t1.exon6;Parent=MS.gene97282.t1 |
chr7.3 | CDS | 78202800 | 78202873 | 78202800 | ID=cds.MS.gene97282.t1;Parent=MS.gene97282.t1 |
chr7.3 | exon | 78201500 | 78201587 | 78201500 | ID=MS.gene97282.t1.exon7;Parent=MS.gene97282.t1 |
chr7.3 | CDS | 78201500 | 78201587 | 78201500 | ID=cds.MS.gene97282.t1;Parent=MS.gene97282.t1 |
chr7.3 | exon | 78200120 | 78200191 | 78200120 | ID=MS.gene97282.t1.exon8;Parent=MS.gene97282.t1 |
chr7.3 | CDS | 78200120 | 78200191 | 78200120 | ID=cds.MS.gene97282.t1;Parent=MS.gene97282.t1 |
chr7.3 | exon | 78199680 | 78199696 | 78199680 | ID=MS.gene97282.t1.exon9;Parent=MS.gene97282.t1 |
chr7.3 | CDS | 78199680 | 78199696 | 78199680 | ID=cds.MS.gene97282.t1;Parent=MS.gene97282.t1 |
chr7.3 | exon | 78198507 | 78198687 | 78198507 | ID=MS.gene97282.t1.exon10;Parent=MS.gene97282.t1 |
chr7.3 | CDS | 78198507 | 78198687 | 78198507 | ID=cds.MS.gene97282.t1;Parent=MS.gene97282.t1 |
Gene Sequence |
Protein sequence |