Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43153.t1 | XP_003621668.1 | 98.2 | 389 | 4 | 2 | 2 | 388 | 1 | 388 | 3.00E-220 | 774.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43153.t1 | Q9S9K4 | 43.0 | 391 | 209 | 8 | 2 | 389 | 3 | 382 | 5.5e-90 | 332.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43153.t1 | G7KTS2 | 98.2 | 389 | 4 | 2 | 2 | 388 | 1 | 388 | 2.1e-220 | 774.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene43153 | MS.gene025899 | PPI |
MS.gene43153 | MS.gene050655 | PPI |
MS.gene43153 | MS.gene22706 | PPI |
MS.gene43153 | MS.gene024430 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43153.t1 | MTR_7g021510 | 97.949 | 390 | 5 | 2 | 2 | 389 | 1 | 389 | 0.0 | 783 |
MS.gene43153.t1 | MTR_7g080230 | 52.430 | 391 | 177 | 6 | 1 | 388 | 1 | 385 | 2.29e-137 | 402 |
MS.gene43153.t1 | MTR_1g078240 | 51.955 | 358 | 165 | 2 | 26 | 383 | 26 | 376 | 1.80e-136 | 396 |
MS.gene43153.t1 | MTR_1g078240 | 51.955 | 358 | 165 | 2 | 26 | 383 | 26 | 376 | 1.52e-135 | 397 |
MS.gene43153.t1 | MTR_1g078240 | 51.955 | 358 | 165 | 2 | 26 | 383 | 26 | 376 | 1.66e-135 | 397 |
MS.gene43153.t1 | MTR_7g080230 | 51.525 | 295 | 137 | 3 | 98 | 389 | 25 | 316 | 1.79e-98 | 300 |
MS.gene43153.t1 | MTR_7g102750 | 35.484 | 403 | 242 | 7 | 2 | 388 | 1 | 401 | 7.19e-84 | 263 |
MS.gene43153.t1 | MTR_1g061940 | 35.075 | 402 | 242 | 7 | 5 | 389 | 7 | 406 | 1.30e-83 | 265 |
MS.gene43153.t1 | MTR_7g102750 | 35.484 | 403 | 242 | 7 | 2 | 388 | 1 | 401 | 1.49e-83 | 264 |
MS.gene43153.t1 | MTR_2g084550 | 37.562 | 402 | 231 | 8 | 2 | 388 | 1 | 397 | 5.59e-81 | 258 |
MS.gene43153.t1 | MTR_4g056420 | 35.417 | 384 | 232 | 6 | 18 | 388 | 16 | 396 | 1.63e-80 | 256 |
MS.gene43153.t1 | MTR_5g061690 | 30.938 | 320 | 187 | 13 | 70 | 376 | 97 | 395 | 8.76e-30 | 121 |
MS.gene43153.t1 | MTR_5g016260 | 27.317 | 410 | 241 | 15 | 2 | 383 | 1 | 381 | 8.94e-30 | 121 |
MS.gene43153.t1 | MTR_5g016260 | 27.317 | 410 | 241 | 15 | 2 | 383 | 1 | 381 | 1.56e-29 | 121 |
MS.gene43153.t1 | MTR_8g075010 | 32.979 | 282 | 156 | 11 | 66 | 335 | 91 | 351 | 1.97e-27 | 114 |
MS.gene43153.t1 | MTR_6g084710 | 27.624 | 362 | 193 | 14 | 61 | 389 | 180 | 505 | 4.12e-27 | 113 |
MS.gene43153.t1 | MTR_3g087780 | 28.707 | 317 | 193 | 12 | 74 | 377 | 99 | 395 | 1.18e-26 | 112 |
MS.gene43153.t1 | MTR_2g059460 | 29.355 | 310 | 183 | 11 | 75 | 371 | 60 | 346 | 1.79e-26 | 110 |
MS.gene43153.t1 | MTR_6g084710 | 27.654 | 358 | 190 | 14 | 61 | 385 | 180 | 501 | 3.48e-26 | 111 |
MS.gene43153.t1 | MTR_0036s0050 | 29.494 | 356 | 210 | 14 | 42 | 382 | 57 | 386 | 6.19e-26 | 109 |
MS.gene43153.t1 | MTR_3g028120 | 30.351 | 313 | 189 | 12 | 42 | 346 | 59 | 350 | 6.32e-26 | 109 |
MS.gene43153.t1 | MTR_5g022880 | 29.368 | 269 | 165 | 8 | 74 | 335 | 112 | 362 | 2.93e-25 | 108 |
MS.gene43153.t1 | MTR_8g075090 | 30.502 | 259 | 151 | 10 | 74 | 325 | 112 | 348 | 9.45e-25 | 106 |
MS.gene43153.t1 | MTR_8g075090 | 30.224 | 268 | 158 | 10 | 74 | 334 | 112 | 357 | 1.02e-24 | 105 |
MS.gene43153.t1 | MTR_8g075090 | 30.502 | 259 | 151 | 10 | 74 | 325 | 112 | 348 | 1.21e-24 | 106 |
MS.gene43153.t1 | MTR_5g080890 | 27.974 | 311 | 193 | 12 | 69 | 369 | 82 | 371 | 1.97e-24 | 104 |
MS.gene43153.t1 | MTR_3g097150 | 28.152 | 341 | 199 | 16 | 73 | 394 | 101 | 414 | 2.31e-24 | 104 |
MS.gene43153.t1 | MTR_8g094590 | 28.108 | 370 | 208 | 15 | 42 | 385 | 38 | 375 | 8.28e-24 | 103 |
MS.gene43153.t1 | MTR_8g094590 | 28.108 | 370 | 208 | 15 | 42 | 385 | 38 | 375 | 9.70e-24 | 102 |
MS.gene43153.t1 | MTR_2g028190 | 29.909 | 331 | 184 | 15 | 73 | 382 | 101 | 404 | 1.10e-23 | 102 |
MS.gene43153.t1 | MTR_4g095270 | 27.554 | 323 | 194 | 13 | 73 | 383 | 79 | 373 | 1.34e-23 | 103 |
MS.gene43153.t1 | MTR_4g095270 | 27.554 | 323 | 194 | 13 | 73 | 383 | 79 | 373 | 1.53e-23 | 103 |
MS.gene43153.t1 | MTR_5g038360 | 29.885 | 261 | 159 | 8 | 75 | 328 | 89 | 332 | 2.38e-23 | 101 |
MS.gene43153.t1 | MTR_5g080960 | 27.974 | 311 | 193 | 12 | 69 | 369 | 82 | 371 | 2.39e-23 | 101 |
MS.gene43153.t1 | MTR_2g059490 | 28.035 | 346 | 199 | 14 | 3 | 335 | 5 | 313 | 6.56e-23 | 100 |
MS.gene43153.t1 | MTR_0221s0060 | 35.115 | 131 | 84 | 1 | 71 | 201 | 6 | 135 | 7.94e-23 | 94.0 |
MS.gene43153.t1 | MTR_8g038280 | 30.488 | 328 | 183 | 18 | 69 | 378 | 82 | 382 | 8.42e-23 | 100 |
MS.gene43153.t1 | MTR_8g094590 | 29.900 | 301 | 166 | 13 | 42 | 329 | 38 | 306 | 1.40e-22 | 97.8 |
MS.gene43153.t1 | MTR_1g115210 | 26.471 | 408 | 240 | 16 | 15 | 400 | 90 | 459 | 5.34e-22 | 98.2 |
MS.gene43153.t1 | MTR_3g096930 | 31.317 | 281 | 152 | 14 | 57 | 329 | 69 | 316 | 6.36e-22 | 97.8 |
MS.gene43153.t1 | MTR_5g072060 | 41.358 | 162 | 84 | 7 | 134 | 289 | 364 | 520 | 6.69e-22 | 98.6 |
MS.gene43153.t1 | MTR_4g007740 | 26.525 | 377 | 229 | 14 | 37 | 398 | 99 | 442 | 6.85e-22 | 97.8 |
MS.gene43153.t1 | MTR_0036s0070 | 27.566 | 341 | 200 | 14 | 42 | 368 | 57 | 364 | 9.00e-22 | 97.1 |
MS.gene43153.t1 | MTR_5g008070 | 28.165 | 316 | 194 | 11 | 73 | 378 | 80 | 372 | 1.04e-21 | 97.1 |
MS.gene43153.t1 | MTR_3g053710 | 26.667 | 345 | 199 | 14 | 73 | 395 | 116 | 428 | 2.31e-21 | 96.3 |
MS.gene43153.t1 | MTR_6g085010 | 28.165 | 316 | 189 | 12 | 75 | 382 | 157 | 442 | 1.15e-20 | 94.4 |
MS.gene43153.t1 | MTR_4g023650 | 28.159 | 277 | 175 | 9 | 54 | 325 | 43 | 300 | 2.03e-20 | 93.2 |
MS.gene43153.t1 | MTR_8g096990 | 27.273 | 330 | 187 | 12 | 69 | 378 | 82 | 378 | 1.31e-19 | 90.9 |
MS.gene43153.t1 | MTR_4g045857 | 28.800 | 250 | 145 | 8 | 75 | 311 | 59 | 288 | 1.71e-19 | 88.6 |
MS.gene43153.t1 | MTR_5g044770 | 28.349 | 321 | 187 | 15 | 73 | 378 | 85 | 377 | 2.70e-19 | 89.7 |
MS.gene43153.t1 | MTR_7g062360 | 27.365 | 296 | 171 | 10 | 77 | 354 | 62 | 331 | 2.88e-19 | 89.7 |
MS.gene43153.t1 | MTR_5g091130 | 27.434 | 339 | 200 | 11 | 73 | 386 | 190 | 507 | 4.02e-19 | 89.7 |
MS.gene43153.t1 | MTR_0024s0040 | 29.586 | 338 | 208 | 14 | 42 | 369 | 31 | 348 | 5.84e-19 | 88.6 |
MS.gene43153.t1 | MTR_3g046300 | 26.444 | 329 | 214 | 11 | 73 | 386 | 96 | 411 | 1.59e-18 | 87.8 |
MS.gene43153.t1 | MTR_5g061690 | 28.839 | 267 | 162 | 11 | 118 | 376 | 10 | 256 | 1.60e-18 | 87.0 |
MS.gene43153.t1 | MTR_7g117430 | 27.041 | 392 | 236 | 18 | 9 | 382 | 76 | 435 | 2.24e-18 | 87.4 |
MS.gene43153.t1 | MTR_0036s0110 | 27.933 | 358 | 211 | 17 | 39 | 384 | 71 | 393 | 2.75e-18 | 87.0 |
MS.gene43153.t1 | MTR_1g039270 | 24.716 | 352 | 219 | 13 | 66 | 400 | 120 | 442 | 3.78e-18 | 86.7 |
MS.gene43153.t1 | MTR_4g023630 | 27.869 | 305 | 180 | 14 | 54 | 347 | 43 | 318 | 1.11e-17 | 84.7 |
MS.gene43153.t1 | MTR_1g029810 | 29.057 | 265 | 161 | 10 | 72 | 332 | 55 | 296 | 1.25e-17 | 84.7 |
MS.gene43153.t1 | MTR_1g029810 | 29.057 | 265 | 161 | 10 | 72 | 332 | 55 | 296 | 1.79e-17 | 84.3 |
MS.gene43153.t1 | MTR_0050s0050 | 47.191 | 89 | 45 | 1 | 115 | 203 | 2 | 88 | 3.70e-17 | 79.3 |
MS.gene43153.t1 | MTR_5g008110 | 26.433 | 314 | 184 | 14 | 72 | 368 | 65 | 348 | 6.91e-17 | 82.4 |
MS.gene43153.t1 | MTR_5g008150 | 26.708 | 322 | 193 | 16 | 72 | 378 | 61 | 354 | 2.57e-16 | 80.9 |
MS.gene43153.t1 | MTR_5g044570 | 27.178 | 287 | 145 | 9 | 75 | 343 | 90 | 330 | 2.70e-16 | 80.5 |
MS.gene43153.t1 | MTR_4g109760 | 28.621 | 290 | 171 | 13 | 93 | 369 | 73 | 339 | 4.87e-16 | 79.7 |
MS.gene43153.t1 | MTR_3g087780 | 26.217 | 267 | 172 | 9 | 118 | 377 | 5 | 253 | 7.44e-16 | 79.0 |
MS.gene43153.t1 | MTR_3g087780 | 26.217 | 267 | 172 | 9 | 118 | 377 | 41 | 289 | 7.87e-16 | 79.3 |
MS.gene43153.t1 | MTR_1g111350 | 24.929 | 353 | 212 | 13 | 66 | 400 | 123 | 440 | 1.71e-15 | 78.6 |
MS.gene43153.t1 | MTR_8g039540 | 25.537 | 419 | 241 | 17 | 2 | 385 | 1 | 383 | 5.98e-15 | 76.6 |
MS.gene43153.t1 | MTR_3g068000 | 25.796 | 314 | 185 | 13 | 79 | 369 | 78 | 366 | 1.14e-14 | 75.9 |
MS.gene43153.t1 | MTR_3g053980 | 26.220 | 328 | 197 | 12 | 73 | 385 | 141 | 438 | 1.45e-14 | 75.9 |
MS.gene43153.t1 | MTR_2g067830 | 25.301 | 332 | 215 | 14 | 72 | 389 | 55 | 367 | 3.49e-14 | 74.3 |
MS.gene43153.t1 | MTR_2g105300 | 24.841 | 314 | 203 | 14 | 90 | 389 | 51 | 345 | 5.60e-14 | 73.6 |
MS.gene43153.t1 | MTR_3g014290 | 27.329 | 322 | 184 | 16 | 75 | 384 | 81 | 364 | 6.68e-14 | 73.6 |
MS.gene43153.t1 | MTR_1g037630 | 27.554 | 323 | 182 | 17 | 75 | 384 | 93 | 376 | 1.28e-13 | 72.4 |
MS.gene43153.t1 | MTR_3g006820 | 24.825 | 286 | 176 | 11 | 54 | 329 | 42 | 298 | 1.46e-13 | 72.4 |
MS.gene43153.t1 | MTR_7g105850 | 24.571 | 350 | 199 | 15 | 71 | 383 | 87 | 408 | 1.87e-13 | 72.4 |
MS.gene43153.t1 | MTR_2g070430 | 23.096 | 394 | 248 | 15 | 17 | 379 | 30 | 399 | 1.97e-13 | 72.0 |
MS.gene43153.t1 | MTR_2g063110 | 23.037 | 382 | 232 | 14 | 48 | 382 | 93 | 459 | 2.08e-13 | 72.0 |
MS.gene43153.t1 | MTR_6g090290 | 25.723 | 311 | 197 | 12 | 73 | 369 | 85 | 375 | 4.36e-13 | 70.9 |
MS.gene43153.t1 | MTR_2g055840 | 23.988 | 321 | 192 | 12 | 75 | 371 | 14 | 306 | 1.69e-12 | 68.9 |
MS.gene43153.t1 | MTR_8g038310 | 24.621 | 264 | 148 | 9 | 73 | 325 | 86 | 309 | 1.42e-11 | 66.2 |
MS.gene43153.t1 | MTR_3g065160 | 24.699 | 332 | 194 | 16 | 79 | 386 | 79 | 378 | 5.72e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene43153.t1 | AT1G05840 | 68.354 | 395 | 120 | 3 | 9 | 401 | 15 | 406 | 0.0 | 556 |
MS.gene43153.t1 | AT3G02740 | 49.000 | 400 | 186 | 7 | 1 | 389 | 3 | 395 | 1.59e-135 | 397 |
MS.gene43153.t1 | AT3G02740 | 52.978 | 319 | 140 | 6 | 74 | 389 | 9 | 320 | 7.66e-116 | 345 |
MS.gene43153.t1 | AT5G36260 | 44.562 | 377 | 199 | 5 | 26 | 399 | 30 | 399 | 1.76e-115 | 346 |
MS.gene43153.t1 | AT1G65240 | 44.236 | 373 | 194 | 8 | 20 | 389 | 21 | 382 | 1.54e-111 | 336 |
MS.gene43153.t1 | AT5G22850 | 36.973 | 403 | 238 | 7 | 1 | 389 | 1 | 401 | 1.68e-83 | 264 |
MS.gene43153.t1 | AT2G36670 | 36.483 | 381 | 221 | 5 | 26 | 388 | 41 | 418 | 2.53e-82 | 261 |
MS.gene43153.t1 | AT2G36670 | 36.010 | 386 | 221 | 6 | 26 | 388 | 41 | 423 | 3.71e-80 | 256 |
MS.gene43153.t1 | AT2G36670 | 37.461 | 323 | 191 | 4 | 74 | 388 | 33 | 352 | 3.95e-74 | 238 |
MS.gene43153.t1 | AT2G36670 | 37.461 | 323 | 191 | 4 | 74 | 388 | 33 | 352 | 3.95e-74 | 238 |
MS.gene43153.t1 | AT1G08210 | 35.878 | 393 | 236 | 6 | 8 | 388 | 12 | 400 | 8.28e-74 | 239 |
MS.gene43153.t1 | AT1G08210 | 35.878 | 393 | 236 | 6 | 8 | 388 | 46 | 434 | 1.08e-73 | 239 |
MS.gene43153.t1 | AT1G08210 | 35.878 | 393 | 236 | 6 | 8 | 388 | 60 | 448 | 1.40e-73 | 239 |
MS.gene43153.t1 | AT1G08210 | 35.878 | 393 | 236 | 6 | 8 | 388 | 12 | 400 | 1.59e-73 | 239 |
MS.gene43153.t1 | AT2G17760 | 31.385 | 325 | 188 | 13 | 66 | 377 | 94 | 396 | 7.00e-31 | 124 |
MS.gene43153.t1 | AT5G43100 | 27.692 | 325 | 195 | 12 | 71 | 383 | 72 | 368 | 5.64e-29 | 118 |
MS.gene43153.t1 | AT4G33490 | 27.970 | 404 | 228 | 15 | 2 | 386 | 1 | 360 | 8.25e-29 | 117 |
MS.gene43153.t1 | AT5G43100 | 27.401 | 354 | 212 | 14 | 45 | 383 | 45 | 368 | 9.48e-29 | 119 |
MS.gene43153.t1 | AT4G33490 | 27.970 | 404 | 228 | 15 | 2 | 386 | 4 | 363 | 1.01e-28 | 117 |
MS.gene43153.t1 | AT4G35880 | 31.655 | 278 | 161 | 11 | 66 | 335 | 97 | 353 | 1.50e-27 | 114 |
MS.gene43153.t1 | AT5G10080 | 28.532 | 361 | 220 | 16 | 43 | 383 | 61 | 403 | 1.56e-27 | 114 |
MS.gene43153.t1 | AT4G35880 | 31.655 | 278 | 161 | 11 | 66 | 335 | 97 | 353 | 1.57e-27 | 114 |
MS.gene43153.t1 | AT3G12700 | 28.653 | 349 | 212 | 15 | 51 | 382 | 83 | 411 | 6.27e-27 | 112 |
MS.gene43153.t1 | AT3G50050 | 28.793 | 323 | 191 | 13 | 73 | 383 | 91 | 386 | 3.63e-26 | 111 |
MS.gene43153.t1 | AT1G49050 | 31.250 | 288 | 171 | 13 | 61 | 340 | 191 | 459 | 1.11e-25 | 108 |
MS.gene43153.t1 | AT2G35615 | 30.312 | 353 | 199 | 16 | 50 | 378 | 63 | 392 | 5.91e-25 | 106 |
MS.gene43153.t1 | AT1G49050 | 31.408 | 277 | 163 | 13 | 61 | 329 | 191 | 448 | 8.68e-25 | 107 |
MS.gene43153.t1 | AT3G42550 | 27.893 | 337 | 161 | 10 | 73 | 389 | 76 | 350 | 4.21e-24 | 103 |
MS.gene43153.t1 | AT3G20015 | 29.532 | 342 | 200 | 15 | 73 | 400 | 129 | 443 | 1.41e-23 | 102 |
MS.gene43153.t1 | AT3G51360 | 26.957 | 345 | 207 | 13 | 72 | 395 | 2 | 322 | 6.03e-23 | 100 |
MS.gene43153.t1 | AT2G03200 | 28.190 | 337 | 184 | 17 | 73 | 382 | 105 | 410 | 8.28e-23 | 100 |
MS.gene43153.t1 | AT1G49050 | 30.682 | 264 | 158 | 12 | 74 | 329 | 29 | 275 | 1.57e-22 | 99.4 |
MS.gene43153.t1 | AT3G51360 | 27.114 | 343 | 205 | 13 | 74 | 395 | 88 | 406 | 1.71e-22 | 99.8 |
MS.gene43153.t1 | AT3G51360 | 26.741 | 359 | 218 | 13 | 74 | 411 | 88 | 422 | 1.84e-22 | 99.4 |
MS.gene43153.t1 | AT3G25700 | 27.193 | 342 | 216 | 12 | 73 | 392 | 82 | 412 | 1.85e-22 | 99.4 |
MS.gene43153.t1 | AT3G51360 | 27.114 | 343 | 205 | 13 | 74 | 395 | 98 | 416 | 1.96e-22 | 99.8 |
MS.gene43153.t1 | AT3G51360 | 27.937 | 315 | 192 | 11 | 74 | 377 | 98 | 388 | 1.98e-22 | 99.0 |
MS.gene43153.t1 | AT3G51360 | 26.741 | 359 | 218 | 13 | 74 | 411 | 98 | 432 | 2.02e-22 | 99.4 |
MS.gene43153.t1 | AT3G51360 | 27.937 | 315 | 192 | 11 | 74 | 377 | 88 | 378 | 2.29e-22 | 98.6 |
MS.gene43153.t1 | AT1G44130 | 27.089 | 347 | 206 | 14 | 57 | 385 | 33 | 350 | 4.69e-22 | 97.8 |
MS.gene43153.t1 | AT3G54400 | 28.750 | 320 | 186 | 15 | 75 | 385 | 88 | 374 | 6.79e-22 | 97.4 |
MS.gene43153.t1 | AT1G31450 | 29.573 | 328 | 189 | 14 | 73 | 378 | 83 | 390 | 1.26e-21 | 97.1 |
MS.gene43153.t1 | AT2G23945 | 28.344 | 314 | 190 | 13 | 74 | 376 | 95 | 384 | 2.62e-21 | 95.9 |
MS.gene43153.t1 | AT3G61820 | 25.796 | 314 | 196 | 10 | 73 | 371 | 133 | 424 | 5.59e-20 | 92.4 |
MS.gene43153.t1 | AT4G30030 | 25.326 | 383 | 251 | 13 | 2 | 376 | 8 | 363 | 1.41e-19 | 90.5 |
MS.gene43153.t1 | AT3G51360 | 28.464 | 267 | 159 | 10 | 74 | 332 | 98 | 340 | 2.15e-19 | 89.4 |
MS.gene43153.t1 | AT4G30040 | 24.534 | 322 | 197 | 10 | 75 | 376 | 85 | 380 | 2.91e-19 | 89.7 |
MS.gene43153.t1 | AT3G18490 | 27.342 | 395 | 229 | 15 | 26 | 400 | 117 | 473 | 1.68e-18 | 87.8 |
MS.gene43153.t1 | AT1G77480 | 25.333 | 375 | 237 | 14 | 26 | 385 | 24 | 370 | 3.49e-18 | 86.7 |
MS.gene43153.t1 | AT5G10770 | 27.479 | 353 | 218 | 14 | 36 | 376 | 91 | 417 | 3.75e-18 | 86.7 |
MS.gene43153.t1 | AT1G77480 | 25.333 | 375 | 237 | 14 | 26 | 385 | 24 | 370 | 7.22e-18 | 85.9 |
MS.gene43153.t1 | AT3G59080 | 26.211 | 351 | 212 | 11 | 73 | 403 | 168 | 491 | 7.56e-18 | 85.9 |
MS.gene43153.t1 | AT1G64830 | 28.526 | 312 | 186 | 14 | 73 | 371 | 84 | 371 | 9.38e-18 | 85.1 |
MS.gene43153.t1 | AT1G79720 | 27.508 | 309 | 178 | 12 | 86 | 376 | 144 | 424 | 1.59e-17 | 84.7 |
MS.gene43153.t1 | AT1G01300 | 25.075 | 335 | 187 | 15 | 73 | 382 | 140 | 435 | 2.90e-17 | 84.0 |
MS.gene43153.t1 | AT2G42980 | 24.819 | 415 | 260 | 13 | 12 | 403 | 98 | 483 | 3.59e-17 | 84.0 |
MS.gene43153.t1 | AT3G51340 | 24.068 | 295 | 189 | 9 | 74 | 352 | 102 | 377 | 6.14e-17 | 82.4 |
MS.gene43153.t1 | AT3G51340 | 27.556 | 225 | 145 | 6 | 74 | 290 | 102 | 316 | 9.99e-17 | 82.0 |
MS.gene43153.t1 | AT3G51340 | 27.556 | 225 | 145 | 6 | 74 | 290 | 102 | 316 | 1.50e-16 | 82.0 |
MS.gene43153.t1 | AT3G51340 | 27.556 | 225 | 145 | 6 | 74 | 290 | 102 | 316 | 1.51e-16 | 82.0 |
MS.gene43153.t1 | AT3G51350 | 25.670 | 261 | 165 | 9 | 74 | 325 | 101 | 341 | 2.08e-16 | 81.6 |
MS.gene43153.t1 | AT5G10760 | 23.977 | 342 | 220 | 12 | 36 | 368 | 92 | 402 | 4.02e-16 | 80.5 |
MS.gene43153.t1 | AT1G25510 | 25.225 | 333 | 211 | 11 | 59 | 383 | 133 | 435 | 7.75e-16 | 79.7 |
MS.gene43153.t1 | AT3G51330 | 26.524 | 328 | 203 | 15 | 74 | 387 | 101 | 404 | 1.54e-15 | 79.0 |
MS.gene43153.t1 | AT3G51330 | 26.524 | 328 | 203 | 15 | 74 | 387 | 101 | 404 | 1.78e-15 | 78.6 |
MS.gene43153.t1 | AT3G51330 | 26.524 | 328 | 203 | 15 | 74 | 387 | 101 | 404 | 1.86e-15 | 78.6 |
MS.gene43153.t1 | AT3G52500 | 25.714 | 350 | 197 | 13 | 71 | 382 | 86 | 410 | 2.34e-15 | 78.2 |
MS.gene43153.t1 | AT2G39710 | 26.007 | 273 | 161 | 12 | 79 | 335 | 69 | 316 | 1.05e-14 | 75.9 |
MS.gene43153.t1 | AT1G09750 | 27.044 | 318 | 190 | 15 | 72 | 376 | 101 | 389 | 1.89e-14 | 75.1 |
MS.gene43153.t1 | AT2G28010 | 24.219 | 384 | 220 | 16 | 4 | 374 | 8 | 333 | 7.66e-14 | 73.2 |
MS.gene43153.t1 | AT3G51360 | 26.102 | 295 | 179 | 11 | 117 | 395 | 9 | 280 | 8.91e-14 | 72.8 |
MS.gene43153.t1 | AT3G51360 | 26.102 | 295 | 179 | 11 | 117 | 395 | 9 | 280 | 8.91e-14 | 72.8 |
MS.gene43153.t1 | AT5G07030 | 27.726 | 321 | 188 | 17 | 75 | 384 | 115 | 402 | 1.56e-13 | 72.4 |
MS.gene43153.t1 | AT2G28225 | 26.861 | 309 | 183 | 17 | 74 | 374 | 66 | 339 | 2.67e-13 | 71.6 |
MS.gene43153.t1 | AT5G33340 | 27.687 | 307 | 193 | 12 | 73 | 369 | 88 | 375 | 8.02e-13 | 70.1 |
MS.gene43153.t1 | AT5G02190 | 24.812 | 266 | 166 | 10 | 84 | 335 | 82 | 327 | 1.77e-12 | 69.3 |
MS.gene43153.t1 | AT2G28220 | 24.274 | 379 | 232 | 19 | 4 | 374 | 8 | 339 | 6.98e-12 | 67.0 |
MS.gene43153.t1 | AT3G25700 | 31.655 | 139 | 86 | 5 | 73 | 209 | 82 | 213 | 1.41e-11 | 65.9 |
MS.gene43153.t1 | AT2G28030 | 25.962 | 312 | 178 | 16 | 74 | 374 | 60 | 329 | 1.68e-11 | 65.9 |
MS.gene43153.t1 | AT3G59080 | 24.217 | 351 | 183 | 11 | 73 | 403 | 168 | 455 | 4.03e-11 | 65.1 |
Find 96 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GACCTTGAAAATCAGGTTAT+TGG | 0.154528 | 7.2:-77867759 | MS.gene43153:CDS |
GCTAATGGAAGTGTTATATT+TGG | 0.167832 | 7.2:-77873130 | MS.gene43153:CDS |
AGGCTTTATTATGCGAAAAT+TGG | 0.187425 | 7.2:-77874817 | MS.gene43153:CDS |
TATACATGCTTTCAATATTC+TGG | 0.202777 | 7.2:-77870423 | MS.gene43153:CDS |
ATGTTTGCTCATTGCTTAAA+TGG | 0.204920 | 7.2:-77871444 | MS.gene43153:CDS |
GAGCTCTGCAAAGAGATAAA+TGG | 0.267376 | 7.2:-77873298 | MS.gene43153:CDS |
AACAGTTACCCAACGGAATC+AGG | 0.277089 | 7.2:+77875074 | None:intergenic |
TATTATTTGCAAGTGGATAC+TGG | 0.306830 | 7.2:-77874772 | MS.gene43153:CDS |
TCAAAATAAAAGGTGACATT+TGG | 0.307429 | 7.2:+77869171 | None:intergenic |
CCCTTTACTGTCTCTTTGTT+CGG | 0.310117 | 7.2:+77870640 | None:intergenic |
CATTGCTTAAATGGAGTAAA+TGG | 0.311727 | 7.2:-77871435 | MS.gene43153:CDS |
TAATGATTCCTGTCCATATC+TGG | 0.313898 | 7.2:-77873245 | MS.gene43153:CDS |
CTTAAAACTGCTTCAGCTAA+TGG | 0.313905 | 7.2:-77873145 | MS.gene43153:CDS |
ATGCATCTGTTGAGAGATTA+AGG | 0.325606 | 7.2:+77870663 | None:intergenic |
CTTGATGGGATACTTGGATT+TGG | 0.329509 | 7.2:-77871522 | MS.gene43153:CDS |
CTATCAGCCATTAGTATATA+AGG | 0.334902 | 7.2:-77870570 | MS.gene43153:intron |
TATTATGCGAAAATTGGAAT+TGG | 0.344165 | 7.2:-77874811 | MS.gene43153:CDS |
TCACCATATATCTCCAGATA+TGG | 0.375783 | 7.2:+77873232 | None:intergenic |
GAGAGAACGTTGTTGATCAT+TGG | 0.377955 | 7.2:+77875178 | None:intergenic |
TGTCCATATCTGGAGATATA+TGG | 0.378802 | 7.2:-77873235 | MS.gene43153:CDS |
TTGAGAGATTAAGGAAAGTA+TGG | 0.379252 | 7.2:+77870672 | None:intergenic |
AGCTCTGCAAAGAGATAAAT+GGG | 0.379514 | 7.2:-77873297 | MS.gene43153:CDS |
CTAATGGAAGTGTTATATTT+GGG | 0.387256 | 7.2:-77873129 | MS.gene43153:intron |
GAAGCGCTTGATGGGATACT+TGG | 0.391907 | 7.2:-77871528 | MS.gene43153:CDS |
TTGTATACCTTATATACTAA+TGG | 0.394050 | 7.2:+77870563 | None:intergenic |
ACCGGCGTCGACCTTCCTTT+AGG | 0.402449 | 7.2:-77875110 | MS.gene43153:CDS |
TGCAAATAATAATCCTTTGA+CGG | 0.409086 | 7.2:+77874784 | None:intergenic |
ATTTCACAACTTTCTTCCTC+TGG | 0.412257 | 7.2:-77871480 | MS.gene43153:CDS |
ATAGATCCCGTCTGGTAGAT+AGG | 0.419699 | 7.2:+77870589 | None:intergenic |
TGAAAATGGACTCTCCTTGA+AGG | 0.420116 | 7.2:-77869151 | MS.gene43153:CDS |
AACATAAAGGAATCTTCTTC+TGG | 0.424248 | 7.2:-77873343 | MS.gene43153:CDS |
GTACTATTTGATCAAGTGTC+CGG | 0.440924 | 7.2:-77873172 | MS.gene43153:CDS |
TCTTACGCTCTACAACATAA+AGG | 0.458427 | 7.2:-77873356 | MS.gene43153:CDS |
GGGCGACCGGTGCCGCCTAA+AGG | 0.466817 | 7.2:+77875095 | None:intergenic |
GACCTTCCTTTAGGCGGCAC+CGG | 0.469975 | 7.2:-77875101 | MS.gene43153:CDS |
GATCATTGGAGAATTTGTAT+TGG | 0.472229 | 7.2:+77875192 | None:intergenic |
ACCGGTCGCCCTGATTCCGT+TGG | 0.473242 | 7.2:-77875083 | MS.gene43153:CDS |
TCAAACGAAGAAGCGCTTGA+TGG | 0.488151 | 7.2:-77871537 | MS.gene43153:CDS |
TACTATTTGATCAAGTGTCC+GGG | 0.497694 | 7.2:-77873171 | MS.gene43153:CDS |
CACTGCAGGTTACTTTGTAA+AGG | 0.500888 | 7.2:-77873200 | MS.gene43153:CDS |
TAAACAAATACATACTGGTC+AGG | 0.506509 | 7.2:+77871351 | None:intergenic |
CCGGTCGCCCTGATTCCGTT+GGG | 0.508177 | 7.2:-77875082 | MS.gene43153:intron |
TTATGCTGCAGTGTTGATGA+TGG | 0.516485 | 7.2:-77869198 | MS.gene43153:intron |
CCGAACAAAGAGACAGTAAA+GGG | 0.516859 | 7.2:-77870640 | MS.gene43153:CDS |
AGGTGTGGTGCTAGACAATC+TGG | 0.516990 | 7.2:-77871573 | MS.gene43153:CDS |
GAAGGTCGACGCCGGTGAGA+AGG | 0.521960 | 7.2:+77875117 | None:intergenic |
TTGAAAATCAGGTTATTGGA+TGG | 0.523428 | 7.2:-77867755 | MS.gene43153:CDS |
AATGGCTGATAGATCCCGTC+TGG | 0.526184 | 7.2:+77870581 | None:intergenic |
ATCGTGTGGATAAACCTTCA+AGG | 0.526209 | 7.2:+77869137 | None:intergenic |
ACATACTGGTCAGGTAATAA+CGG | 0.533478 | 7.2:+77871360 | None:intergenic |
AAGGTCGACGCCGGTGAGAA+GGG | 0.534058 | 7.2:+77875118 | None:intergenic |
CAAACGAAGAAGCGCTTGAT+GGG | 0.535187 | 7.2:-77871536 | MS.gene43153:CDS |
CGGTGAGAAGGGAGATTTGA+CGG | 0.536184 | 7.2:+77875129 | None:intergenic |
GACGTTGAAAACGCCGTGGT+TGG | 0.538597 | 7.2:+77875214 | None:intergenic |
GTTGAAAACGCCGTGGTTGG+CGG | 0.542382 | 7.2:+77875217 | None:intergenic |
TGGAATTGGAACTCCGTCAA+AGG | 0.546019 | 7.2:-77874797 | MS.gene43153:CDS |
ATATATCTCCAGATATGGAC+AGG | 0.546608 | 7.2:+77873237 | None:intergenic |
ACACCAAGGTTACTTCTAGT+AGG | 0.550642 | 7.2:+77874706 | None:intergenic |
CCCAACGGAATCAGGGCGAC+CGG | 0.553325 | 7.2:+77875082 | None:intergenic |
GGAGGTGGTATATTTGCGAT+TGG | 0.555006 | 7.2:-77871414 | MS.gene43153:CDS |
GACCGGTGCCGCCTAAAGGA+AGG | 0.555280 | 7.2:+77875099 | None:intergenic |
GAAAGCATGTATACTCGTCA+TGG | 0.560971 | 7.2:+77870433 | None:intergenic |
GGTGATGGCAGCTCCACTGC+AGG | 0.561770 | 7.2:-77873214 | MS.gene43153:CDS |
AAAGGATTATTATTTGCAAG+TGG | 0.565196 | 7.2:-77874779 | MS.gene43153:CDS |
CATGCTTTCAATATTCTGGA+AGG | 0.569785 | 7.2:-77870419 | MS.gene43153:intron |
AACATGACAGCGATTCAAGT+TGG | 0.572363 | 7.2:-77870695 | MS.gene43153:CDS |
CCCGTCTGGTAGATAGGCCA+AGG | 0.572658 | 7.2:+77870595 | None:intergenic |
ACAGTTACCCAACGGAATCA+GGG | 0.582244 | 7.2:+77875075 | None:intergenic |
TTAAATGGAGTAAATGGAGG+TGG | 0.590871 | 7.2:-77871429 | MS.gene43153:CDS |
TCCGAACAAAGAGACAGTAA+AGG | 0.593414 | 7.2:-77870641 | MS.gene43153:CDS |
AACGGAGTTGTGTTCACTGT+AGG | 0.594168 | 7.2:+77871378 | None:intergenic |
CTTTACAAAGTAACCTGCAG+TGG | 0.595178 | 7.2:+77873201 | None:intergenic |
TCTACTGTTTCCGCCAACCA+CGG | 0.600331 | 7.2:-77875227 | MS.gene43153:CDS |
AATTGACAGTGGTACAACCT+TGG | 0.604621 | 7.2:-77870612 | MS.gene43153:CDS |
ACCTTGGCCTATCTACCAGA+CGG | 0.608325 | 7.2:-77870596 | MS.gene43153:CDS |
TGTCCTACTAGAAGTAACCT+TGG | 0.614346 | 7.2:-77874709 | MS.gene43153:CDS |
GGCGTCGACCTTCCTTTAGG+CGG | 0.615962 | 7.2:-77875107 | MS.gene43153:CDS |
GCCTAAAGGAAGGTCGACGC+CGG | 0.616103 | 7.2:+77875109 | None:intergenic |
TTGCAGAGCTCTTGATCACA+CGG | 0.617035 | 7.2:+77873310 | None:intergenic |
CGTCAAATCTCCCTTCTCAC+CGG | 0.619881 | 7.2:-77875128 | MS.gene43153:CDS |
CCTTGGCCTATCTACCAGAC+GGG | 0.625442 | 7.2:-77870595 | MS.gene43153:CDS |
TATCTGGAGATATATGGTGA+TGG | 0.634106 | 7.2:-77873229 | MS.gene43153:CDS |
GAAAGAAACAAATAATCGTG+TGG | 0.635029 | 7.2:+77869123 | None:intergenic |
GTCATGTTGACACTGTAATG+TGG | 0.635815 | 7.2:+77870710 | None:intergenic |
TACTGGAACTGATATGATGT+GGG | 0.640658 | 7.2:-77874755 | MS.gene43153:CDS |
TTCATCGAGTATCAAAGTGA+GGG | 0.644299 | 7.2:-77867295 | None:intergenic |
GTTCATCGAGTATCAAAGTG+AGG | 0.648643 | 7.2:-77867296 | None:intergenic |
TGCTTAAATGGAGTAAATGG+AGG | 0.650674 | 7.2:-77871432 | MS.gene43153:CDS |
GTAGTCATGAGCTTTGAGAA+CGG | 0.656404 | 7.2:+77875154 | None:intergenic |
CTCTGCAAAGAGATAAATGG+GGG | 0.678698 | 7.2:-77873295 | MS.gene43153:CDS |
ACTATTTGATCAAGTGTCCG+GGG | 0.681013 | 7.2:-77873170 | MS.gene43153:CDS |
ATACTGGAACTGATATGATG+TGG | 0.690963 | 7.2:-77874756 | MS.gene43153:CDS |
AAAGGGACAATAATTGACAG+TGG | 0.722747 | 7.2:-77870623 | MS.gene43153:CDS |
GCTCTGCAAAGAGATAAATG+GGG | 0.754212 | 7.2:-77873296 | MS.gene43153:CDS |
ATTGGACGTTGAAAACGCCG+TGG | 0.761258 | 7.2:+77875210 | None:intergenic |
TGAGAAGGGAGATTTGACGG+CGG | 0.816902 | 7.2:+77875132 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 77867298 | 77875300 | 77867298 | ID=MS.gene43153 |
chr7.2 | mRNA | 77867298 | 77875300 | 77867298 | ID=MS.gene43153.t1;Parent=MS.gene43153 |
chr7.2 | exon | 77875083 | 77875300 | 77875083 | ID=MS.gene43153.t1.exon1;Parent=MS.gene43153.t1 |
chr7.2 | CDS | 77875083 | 77875300 | 77875083 | ID=cds.MS.gene43153.t1;Parent=MS.gene43153.t1 |
chr7.2 | exon | 77874708 | 77874837 | 77874708 | ID=MS.gene43153.t1.exon2;Parent=MS.gene43153.t1 |
chr7.2 | CDS | 77874708 | 77874837 | 77874708 | ID=cds.MS.gene43153.t1;Parent=MS.gene43153.t1 |
chr7.2 | exon | 77873130 | 77873383 | 77873130 | ID=MS.gene43153.t1.exon3;Parent=MS.gene43153.t1 |
chr7.2 | CDS | 77873130 | 77873383 | 77873130 | ID=cds.MS.gene43153.t1;Parent=MS.gene43153.t1 |
chr7.2 | exon | 77871366 | 77871593 | 77871366 | ID=MS.gene43153.t1.exon4;Parent=MS.gene43153.t1 |
chr7.2 | CDS | 77871366 | 77871593 | 77871366 | ID=cds.MS.gene43153.t1;Parent=MS.gene43153.t1 |
chr7.2 | exon | 77870571 | 77870733 | 77870571 | ID=MS.gene43153.t1.exon5;Parent=MS.gene43153.t1 |
chr7.2 | CDS | 77870571 | 77870733 | 77870571 | ID=cds.MS.gene43153.t1;Parent=MS.gene43153.t1 |
chr7.2 | exon | 77870420 | 77870493 | 77870420 | ID=MS.gene43153.t1.exon6;Parent=MS.gene43153.t1 |
chr7.2 | CDS | 77870420 | 77870493 | 77870420 | ID=cds.MS.gene43153.t1;Parent=MS.gene43153.t1 |
chr7.2 | exon | 77869122 | 77869209 | 77869122 | ID=MS.gene43153.t1.exon7;Parent=MS.gene43153.t1 |
chr7.2 | CDS | 77869122 | 77869209 | 77869122 | ID=cds.MS.gene43153.t1;Parent=MS.gene43153.t1 |
chr7.2 | exon | 77867742 | 77867813 | 77867742 | ID=MS.gene43153.t1.exon8;Parent=MS.gene43153.t1 |
chr7.2 | CDS | 77867742 | 77867813 | 77867742 | ID=cds.MS.gene43153.t1;Parent=MS.gene43153.t1 |
chr7.2 | exon | 77867298 | 77867318 | 77867298 | ID=MS.gene43153.t1.exon9;Parent=MS.gene43153.t1 |
chr7.2 | CDS | 77867298 | 77867318 | 77867298 | ID=cds.MS.gene43153.t1;Parent=MS.gene43153.t1 |
Gene Sequence |
Protein sequence |