Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23875.t1 | XP_003621668.1 | 98.5 | 388 | 3 | 2 | 1 | 385 | 1 | 388 | 4.50E-221 | 776.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23875.t1 | Q9S9K4 | 42.5 | 388 | 209 | 8 | 2 | 386 | 6 | 382 | 1.4e-90 | 334.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23875.t1 | G7KTS2 | 98.5 | 388 | 3 | 2 | 1 | 385 | 1 | 388 | 3.3e-221 | 776.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene23875 | MS.gene025899 | PPI |
MS.gene050655 | MS.gene23875 | PPI |
MS.gene22706 | MS.gene23875 | PPI |
MS.gene024430 | MS.gene23875 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23875.t1 | MTR_7g021510 | 98.201 | 389 | 4 | 2 | 1 | 386 | 1 | 389 | 0.0 | 783 |
MS.gene23875.t1 | MTR_1g078240 | 51.955 | 358 | 165 | 2 | 23 | 380 | 26 | 376 | 3.47e-136 | 395 |
MS.gene23875.t1 | MTR_7g080230 | 51.421 | 387 | 181 | 4 | 2 | 385 | 3 | 385 | 9.67e-136 | 397 |
MS.gene23875.t1 | MTR_1g078240 | 51.955 | 358 | 165 | 2 | 23 | 380 | 26 | 376 | 1.84e-135 | 397 |
MS.gene23875.t1 | MTR_1g078240 | 51.955 | 358 | 165 | 2 | 23 | 380 | 26 | 376 | 1.88e-135 | 397 |
MS.gene23875.t1 | MTR_7g080230 | 51.525 | 295 | 137 | 3 | 95 | 386 | 25 | 316 | 2.58e-98 | 299 |
MS.gene23875.t1 | MTR_1g061940 | 35.338 | 399 | 239 | 7 | 5 | 386 | 10 | 406 | 1.53e-83 | 264 |
MS.gene23875.t1 | MTR_7g102750 | 36.139 | 404 | 236 | 8 | 1 | 385 | 1 | 401 | 1.84e-83 | 262 |
MS.gene23875.t1 | MTR_7g102750 | 36.139 | 404 | 236 | 8 | 1 | 385 | 1 | 401 | 2.84e-83 | 263 |
MS.gene23875.t1 | MTR_4g056420 | 35.354 | 396 | 238 | 7 | 3 | 385 | 6 | 396 | 5.85e-81 | 257 |
MS.gene23875.t1 | MTR_2g084550 | 38.060 | 402 | 227 | 9 | 1 | 385 | 1 | 397 | 9.47e-81 | 257 |
MS.gene23875.t1 | MTR_5g061690 | 30.938 | 320 | 187 | 13 | 67 | 373 | 97 | 395 | 1.12e-29 | 120 |
MS.gene23875.t1 | MTR_5g016260 | 29.907 | 321 | 189 | 11 | 70 | 380 | 87 | 381 | 5.43e-29 | 119 |
MS.gene23875.t1 | MTR_5g016260 | 29.907 | 321 | 189 | 11 | 70 | 380 | 87 | 381 | 9.03e-29 | 119 |
MS.gene23875.t1 | MTR_8g075010 | 32.979 | 282 | 156 | 11 | 63 | 332 | 91 | 351 | 2.39e-27 | 114 |
MS.gene23875.t1 | MTR_6g084710 | 27.624 | 362 | 193 | 14 | 58 | 386 | 180 | 505 | 5.10e-27 | 113 |
MS.gene23875.t1 | MTR_3g087780 | 28.707 | 317 | 193 | 12 | 71 | 374 | 99 | 395 | 1.16e-26 | 112 |
MS.gene23875.t1 | MTR_2g059460 | 29.355 | 310 | 183 | 11 | 72 | 368 | 60 | 346 | 1.72e-26 | 110 |
MS.gene23875.t1 | MTR_6g084710 | 27.654 | 358 | 190 | 14 | 58 | 382 | 180 | 501 | 3.70e-26 | 110 |
MS.gene23875.t1 | MTR_3g028120 | 30.351 | 313 | 189 | 12 | 39 | 343 | 59 | 350 | 4.95e-26 | 109 |
MS.gene23875.t1 | MTR_0036s0050 | 29.494 | 356 | 210 | 14 | 39 | 379 | 57 | 386 | 7.07e-26 | 108 |
MS.gene23875.t1 | MTR_5g022880 | 29.658 | 263 | 160 | 8 | 71 | 326 | 112 | 356 | 3.11e-25 | 107 |
MS.gene23875.t1 | MTR_8g075090 | 30.502 | 259 | 151 | 10 | 71 | 322 | 112 | 348 | 1.01e-24 | 106 |
MS.gene23875.t1 | MTR_8g075090 | 30.224 | 268 | 158 | 10 | 71 | 331 | 112 | 357 | 1.02e-24 | 105 |
MS.gene23875.t1 | MTR_8g075090 | 30.502 | 259 | 151 | 10 | 71 | 322 | 112 | 348 | 1.38e-24 | 105 |
MS.gene23875.t1 | MTR_5g080890 | 27.974 | 311 | 193 | 12 | 66 | 366 | 82 | 371 | 2.32e-24 | 104 |
MS.gene23875.t1 | MTR_3g097150 | 28.152 | 341 | 199 | 16 | 70 | 391 | 101 | 414 | 2.67e-24 | 104 |
MS.gene23875.t1 | MTR_8g094590 | 28.108 | 370 | 208 | 15 | 39 | 382 | 38 | 375 | 7.08e-24 | 102 |
MS.gene23875.t1 | MTR_8g094590 | 28.108 | 370 | 208 | 15 | 39 | 382 | 38 | 375 | 7.46e-24 | 103 |
MS.gene23875.t1 | MTR_4g095270 | 27.554 | 323 | 194 | 13 | 70 | 380 | 79 | 373 | 1.30e-23 | 103 |
MS.gene23875.t1 | MTR_2g028190 | 30.211 | 331 | 183 | 16 | 70 | 379 | 101 | 404 | 1.37e-23 | 102 |
MS.gene23875.t1 | MTR_4g095270 | 27.245 | 323 | 195 | 12 | 70 | 380 | 79 | 373 | 1.74e-23 | 103 |
MS.gene23875.t1 | MTR_5g080960 | 27.974 | 311 | 193 | 12 | 66 | 366 | 82 | 371 | 2.41e-23 | 101 |
MS.gene23875.t1 | MTR_5g038360 | 29.885 | 261 | 159 | 8 | 72 | 325 | 89 | 332 | 2.57e-23 | 101 |
MS.gene23875.t1 | MTR_8g038280 | 29.973 | 367 | 204 | 22 | 27 | 375 | 51 | 382 | 6.29e-23 | 100 |
MS.gene23875.t1 | MTR_0221s0060 | 35.115 | 131 | 84 | 1 | 68 | 198 | 6 | 135 | 7.49e-23 | 94.0 |
MS.gene23875.t1 | MTR_8g094590 | 29.900 | 301 | 166 | 13 | 39 | 326 | 38 | 306 | 1.49e-22 | 97.4 |
MS.gene23875.t1 | MTR_2g059490 | 30.515 | 272 | 161 | 12 | 72 | 332 | 59 | 313 | 5.11e-22 | 97.8 |
MS.gene23875.t1 | MTR_3g096930 | 31.317 | 281 | 152 | 14 | 54 | 326 | 69 | 316 | 6.15e-22 | 97.8 |
MS.gene23875.t1 | MTR_4g007740 | 26.525 | 377 | 229 | 14 | 34 | 395 | 99 | 442 | 6.55e-22 | 97.8 |
MS.gene23875.t1 | MTR_5g072060 | 41.358 | 162 | 84 | 7 | 131 | 286 | 364 | 520 | 7.60e-22 | 98.2 |
MS.gene23875.t1 | MTR_5g008070 | 28.165 | 316 | 194 | 11 | 70 | 375 | 80 | 372 | 9.30e-22 | 97.1 |
MS.gene23875.t1 | MTR_0036s0070 | 27.566 | 341 | 200 | 14 | 39 | 365 | 57 | 364 | 9.84e-22 | 97.1 |
MS.gene23875.t1 | MTR_1g115210 | 26.410 | 390 | 230 | 14 | 29 | 397 | 106 | 459 | 1.00e-21 | 97.4 |
MS.gene23875.t1 | MTR_3g053710 | 26.667 | 345 | 199 | 14 | 70 | 392 | 116 | 428 | 2.28e-21 | 96.3 |
MS.gene23875.t1 | MTR_6g085010 | 28.165 | 316 | 189 | 12 | 72 | 379 | 157 | 442 | 1.58e-20 | 94.0 |
MS.gene23875.t1 | MTR_4g023650 | 28.159 | 277 | 175 | 9 | 51 | 322 | 43 | 300 | 2.63e-20 | 92.8 |
MS.gene23875.t1 | MTR_8g096990 | 27.273 | 330 | 187 | 12 | 66 | 375 | 82 | 378 | 1.20e-19 | 90.9 |
MS.gene23875.t1 | MTR_4g045857 | 28.800 | 250 | 145 | 8 | 72 | 308 | 59 | 288 | 1.45e-19 | 89.0 |
MS.gene23875.t1 | MTR_7g062360 | 27.365 | 296 | 171 | 10 | 74 | 351 | 62 | 331 | 3.04e-19 | 89.7 |
MS.gene23875.t1 | MTR_5g044770 | 28.349 | 321 | 187 | 15 | 70 | 375 | 85 | 377 | 3.18e-19 | 89.4 |
MS.gene23875.t1 | MTR_5g091130 | 27.434 | 339 | 200 | 11 | 70 | 383 | 190 | 507 | 4.51e-19 | 89.7 |
MS.gene23875.t1 | MTR_0024s0040 | 29.290 | 338 | 209 | 14 | 39 | 366 | 31 | 348 | 5.68e-19 | 88.6 |
MS.gene23875.t1 | MTR_3g046300 | 26.444 | 329 | 214 | 11 | 70 | 383 | 96 | 411 | 1.47e-18 | 87.8 |
MS.gene23875.t1 | MTR_5g061690 | 28.839 | 267 | 162 | 11 | 115 | 373 | 10 | 256 | 1.83e-18 | 87.0 |
MS.gene23875.t1 | MTR_7g117430 | 27.829 | 327 | 188 | 16 | 70 | 379 | 140 | 435 | 2.68e-18 | 87.0 |
MS.gene23875.t1 | MTR_0036s0110 | 27.933 | 358 | 211 | 17 | 36 | 381 | 71 | 393 | 3.40e-18 | 86.7 |
MS.gene23875.t1 | MTR_1g039270 | 24.716 | 352 | 219 | 13 | 63 | 397 | 120 | 442 | 4.14e-18 | 86.3 |
MS.gene23875.t1 | MTR_4g023630 | 27.869 | 305 | 180 | 14 | 51 | 344 | 43 | 318 | 1.16e-17 | 84.7 |
MS.gene23875.t1 | MTR_1g029810 | 29.057 | 265 | 161 | 10 | 69 | 329 | 55 | 296 | 1.22e-17 | 84.7 |
MS.gene23875.t1 | MTR_1g029810 | 29.057 | 265 | 161 | 10 | 69 | 329 | 55 | 296 | 1.47e-17 | 84.7 |
MS.gene23875.t1 | MTR_0050s0050 | 47.191 | 89 | 45 | 1 | 112 | 200 | 2 | 88 | 3.36e-17 | 79.3 |
MS.gene23875.t1 | MTR_5g008110 | 26.433 | 314 | 184 | 14 | 69 | 365 | 65 | 348 | 5.99e-17 | 82.4 |
MS.gene23875.t1 | MTR_5g008150 | 26.708 | 322 | 193 | 16 | 69 | 375 | 61 | 354 | 2.47e-16 | 80.9 |
MS.gene23875.t1 | MTR_5g044570 | 27.178 | 287 | 145 | 9 | 72 | 340 | 90 | 330 | 2.69e-16 | 80.5 |
MS.gene23875.t1 | MTR_4g109760 | 28.621 | 290 | 171 | 13 | 90 | 366 | 73 | 339 | 5.37e-16 | 79.7 |
MS.gene23875.t1 | MTR_3g087780 | 26.217 | 267 | 172 | 9 | 115 | 374 | 41 | 289 | 8.67e-16 | 79.0 |
MS.gene23875.t1 | MTR_3g087780 | 26.766 | 269 | 168 | 10 | 115 | 374 | 5 | 253 | 8.83e-16 | 79.0 |
MS.gene23875.t1 | MTR_1g111350 | 24.929 | 353 | 212 | 13 | 63 | 397 | 123 | 440 | 1.75e-15 | 78.6 |
MS.gene23875.t1 | MTR_3g053980 | 26.220 | 328 | 197 | 12 | 70 | 382 | 141 | 438 | 1.44e-14 | 75.9 |
MS.gene23875.t1 | MTR_3g068000 | 25.796 | 314 | 185 | 13 | 76 | 366 | 78 | 366 | 1.48e-14 | 75.5 |
MS.gene23875.t1 | MTR_2g067830 | 25.301 | 332 | 215 | 14 | 69 | 386 | 55 | 367 | 3.27e-14 | 74.3 |
MS.gene23875.t1 | MTR_2g105300 | 24.841 | 314 | 203 | 14 | 87 | 386 | 51 | 345 | 4.83e-14 | 73.6 |
MS.gene23875.t1 | MTR_3g014290 | 27.329 | 322 | 184 | 16 | 72 | 381 | 81 | 364 | 6.67e-14 | 73.2 |
MS.gene23875.t1 | MTR_8g039540 | 26.014 | 419 | 237 | 19 | 1 | 382 | 1 | 383 | 6.98e-14 | 73.6 |
MS.gene23875.t1 | MTR_3g006820 | 24.825 | 286 | 176 | 11 | 51 | 326 | 42 | 298 | 1.27e-13 | 72.4 |
MS.gene23875.t1 | MTR_1g037630 | 27.554 | 323 | 182 | 17 | 72 | 381 | 93 | 376 | 1.37e-13 | 72.4 |
MS.gene23875.t1 | MTR_2g070430 | 23.096 | 394 | 248 | 15 | 14 | 376 | 30 | 399 | 1.38e-13 | 72.4 |
MS.gene23875.t1 | MTR_7g105850 | 24.571 | 350 | 199 | 16 | 68 | 380 | 87 | 408 | 2.03e-13 | 72.0 |
MS.gene23875.t1 | MTR_2g063110 | 23.037 | 382 | 232 | 14 | 45 | 379 | 93 | 459 | 3.11e-13 | 71.6 |
MS.gene23875.t1 | MTR_6g090290 | 25.723 | 311 | 197 | 12 | 70 | 366 | 85 | 375 | 4.81e-13 | 70.9 |
MS.gene23875.t1 | MTR_2g055840 | 23.988 | 321 | 192 | 12 | 72 | 368 | 14 | 306 | 1.86e-12 | 68.6 |
MS.gene23875.t1 | MTR_8g038310 | 24.621 | 264 | 148 | 9 | 70 | 322 | 86 | 309 | 1.46e-11 | 66.2 |
MS.gene23875.t1 | MTR_3g065160 | 24.699 | 332 | 194 | 16 | 76 | 383 | 79 | 378 | 6.85e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23875.t1 | AT1G05840 | 67.929 | 396 | 122 | 3 | 5 | 398 | 14 | 406 | 0.0 | 552 |
MS.gene23875.t1 | AT3G02740 | 48.744 | 398 | 184 | 7 | 2 | 386 | 5 | 395 | 2.52e-134 | 394 |
MS.gene23875.t1 | AT3G02740 | 52.978 | 319 | 140 | 6 | 71 | 386 | 9 | 320 | 8.87e-116 | 344 |
MS.gene23875.t1 | AT5G36260 | 43.814 | 388 | 208 | 5 | 2 | 386 | 9 | 389 | 1.26e-115 | 346 |
MS.gene23875.t1 | AT1G65240 | 44.142 | 367 | 192 | 7 | 23 | 386 | 26 | 382 | 5.09e-111 | 334 |
MS.gene23875.t1 | AT5G22850 | 38.798 | 366 | 210 | 5 | 33 | 386 | 38 | 401 | 3.01e-83 | 263 |
MS.gene23875.t1 | AT2G36670 | 36.483 | 381 | 221 | 5 | 23 | 385 | 41 | 418 | 2.43e-82 | 261 |
MS.gene23875.t1 | AT2G36670 | 36.010 | 386 | 221 | 6 | 23 | 385 | 41 | 423 | 5.24e-80 | 255 |
MS.gene23875.t1 | AT2G36670 | 37.461 | 323 | 191 | 4 | 71 | 385 | 33 | 352 | 4.33e-74 | 238 |
MS.gene23875.t1 | AT2G36670 | 37.461 | 323 | 191 | 4 | 71 | 385 | 33 | 352 | 4.33e-74 | 238 |
MS.gene23875.t1 | AT1G08210 | 35.897 | 390 | 234 | 6 | 8 | 385 | 15 | 400 | 1.22e-72 | 236 |
MS.gene23875.t1 | AT1G08210 | 35.897 | 390 | 234 | 6 | 8 | 385 | 49 | 434 | 1.85e-72 | 236 |
MS.gene23875.t1 | AT1G08210 | 35.990 | 389 | 233 | 6 | 9 | 385 | 16 | 400 | 2.39e-72 | 236 |
MS.gene23875.t1 | AT1G08210 | 35.897 | 390 | 234 | 6 | 8 | 385 | 63 | 448 | 2.61e-72 | 236 |
MS.gene23875.t1 | AT2G17760 | 31.385 | 325 | 188 | 13 | 63 | 374 | 94 | 396 | 8.08e-31 | 124 |
MS.gene23875.t1 | AT5G43100 | 26.221 | 389 | 236 | 15 | 7 | 380 | 16 | 368 | 1.50e-29 | 120 |
MS.gene23875.t1 | AT5G43100 | 26.221 | 389 | 236 | 15 | 7 | 380 | 16 | 368 | 2.35e-29 | 120 |
MS.gene23875.t1 | AT4G33490 | 27.901 | 405 | 225 | 17 | 1 | 383 | 1 | 360 | 2.65e-28 | 115 |
MS.gene23875.t1 | AT4G33490 | 27.901 | 405 | 225 | 17 | 1 | 383 | 4 | 363 | 3.46e-28 | 115 |
MS.gene23875.t1 | AT5G10080 | 26.859 | 417 | 247 | 18 | 4 | 380 | 5 | 403 | 1.21e-27 | 115 |
MS.gene23875.t1 | AT4G35880 | 31.655 | 278 | 161 | 11 | 63 | 332 | 97 | 353 | 1.38e-27 | 114 |
MS.gene23875.t1 | AT4G35880 | 31.655 | 278 | 161 | 11 | 63 | 332 | 97 | 353 | 1.92e-27 | 114 |
MS.gene23875.t1 | AT3G12700 | 28.653 | 349 | 212 | 15 | 48 | 379 | 83 | 411 | 4.99e-27 | 112 |
MS.gene23875.t1 | AT3G50050 | 28.793 | 323 | 191 | 13 | 70 | 380 | 91 | 386 | 4.94e-26 | 110 |
MS.gene23875.t1 | AT1G49050 | 31.250 | 288 | 171 | 13 | 58 | 337 | 191 | 459 | 1.08e-25 | 108 |
MS.gene23875.t1 | AT2G35615 | 29.288 | 379 | 216 | 18 | 23 | 375 | 40 | 392 | 3.07e-25 | 107 |
MS.gene23875.t1 | AT1G49050 | 31.408 | 277 | 163 | 13 | 58 | 326 | 191 | 448 | 1.07e-24 | 106 |
MS.gene23875.t1 | AT3G42550 | 27.893 | 337 | 161 | 10 | 70 | 386 | 76 | 350 | 4.33e-24 | 103 |
MS.gene23875.t1 | AT3G20015 | 29.532 | 342 | 200 | 15 | 70 | 397 | 129 | 443 | 2.12e-23 | 102 |
MS.gene23875.t1 | AT3G51360 | 26.957 | 345 | 207 | 13 | 69 | 392 | 2 | 322 | 7.46e-23 | 100 |
MS.gene23875.t1 | AT2G03200 | 28.190 | 337 | 184 | 17 | 70 | 379 | 105 | 410 | 8.07e-23 | 100 |
MS.gene23875.t1 | AT3G51360 | 27.114 | 343 | 205 | 13 | 71 | 392 | 88 | 406 | 1.68e-22 | 99.8 |
MS.gene23875.t1 | AT1G49050 | 30.682 | 264 | 158 | 12 | 71 | 326 | 29 | 275 | 1.73e-22 | 99.0 |
MS.gene23875.t1 | AT3G51360 | 26.741 | 359 | 218 | 13 | 71 | 408 | 88 | 422 | 1.83e-22 | 99.4 |
MS.gene23875.t1 | AT3G51360 | 26.741 | 359 | 218 | 13 | 71 | 408 | 98 | 432 | 1.83e-22 | 99.4 |
MS.gene23875.t1 | AT3G25700 | 27.193 | 342 | 216 | 13 | 70 | 389 | 82 | 412 | 2.00e-22 | 99.4 |
MS.gene23875.t1 | AT3G51360 | 27.937 | 315 | 192 | 11 | 71 | 374 | 98 | 388 | 2.05e-22 | 99.0 |
MS.gene23875.t1 | AT3G51360 | 27.937 | 315 | 192 | 11 | 71 | 374 | 88 | 378 | 2.28e-22 | 98.6 |
MS.gene23875.t1 | AT3G51360 | 27.114 | 343 | 205 | 13 | 71 | 392 | 98 | 416 | 2.34e-22 | 99.4 |
MS.gene23875.t1 | AT1G44130 | 27.089 | 347 | 206 | 14 | 54 | 382 | 33 | 350 | 4.12e-22 | 97.8 |
MS.gene23875.t1 | AT3G54400 | 28.750 | 320 | 186 | 15 | 72 | 382 | 88 | 374 | 7.02e-22 | 97.4 |
MS.gene23875.t1 | AT1G31450 | 29.573 | 328 | 189 | 14 | 70 | 375 | 83 | 390 | 1.38e-21 | 96.7 |
MS.gene23875.t1 | AT2G23945 | 28.344 | 314 | 190 | 13 | 71 | 373 | 95 | 384 | 2.56e-21 | 95.9 |
MS.gene23875.t1 | AT4G30030 | 25.330 | 379 | 252 | 12 | 1 | 373 | 10 | 363 | 1.27e-20 | 93.6 |
MS.gene23875.t1 | AT3G61820 | 25.796 | 314 | 196 | 10 | 70 | 368 | 133 | 424 | 6.82e-20 | 92.0 |
MS.gene23875.t1 | AT3G51360 | 28.464 | 267 | 159 | 10 | 71 | 329 | 98 | 340 | 2.13e-19 | 89.4 |
MS.gene23875.t1 | AT4G30040 | 24.534 | 322 | 197 | 10 | 72 | 373 | 85 | 380 | 2.51e-19 | 89.7 |
MS.gene23875.t1 | AT3G18490 | 28.451 | 355 | 200 | 14 | 63 | 397 | 153 | 473 | 1.96e-18 | 87.8 |
MS.gene23875.t1 | AT1G77480 | 25.333 | 375 | 237 | 14 | 23 | 382 | 24 | 370 | 2.22e-18 | 87.0 |
MS.gene23875.t1 | AT5G10770 | 27.479 | 353 | 218 | 14 | 33 | 373 | 91 | 417 | 3.15e-18 | 87.0 |
MS.gene23875.t1 | AT1G77480 | 25.333 | 375 | 237 | 14 | 23 | 382 | 24 | 370 | 3.57e-18 | 86.7 |
MS.gene23875.t1 | AT3G59080 | 26.211 | 351 | 212 | 11 | 70 | 400 | 168 | 491 | 8.05e-18 | 85.9 |
MS.gene23875.t1 | AT1G64830 | 28.896 | 308 | 190 | 12 | 70 | 368 | 84 | 371 | 8.42e-18 | 85.5 |
MS.gene23875.t1 | AT1G79720 | 27.508 | 309 | 178 | 12 | 83 | 373 | 144 | 424 | 1.46e-17 | 84.7 |
MS.gene23875.t1 | AT1G01300 | 25.075 | 335 | 187 | 15 | 70 | 379 | 140 | 435 | 3.39e-17 | 84.0 |
MS.gene23875.t1 | AT2G42980 | 25.862 | 348 | 219 | 11 | 70 | 400 | 158 | 483 | 5.86e-17 | 83.2 |
MS.gene23875.t1 | AT3G51340 | 24.068 | 295 | 189 | 9 | 71 | 349 | 102 | 377 | 7.99e-17 | 82.0 |
MS.gene23875.t1 | AT3G51340 | 27.556 | 225 | 145 | 6 | 71 | 287 | 102 | 316 | 9.40e-17 | 82.0 |
MS.gene23875.t1 | AT3G51340 | 27.556 | 225 | 145 | 6 | 71 | 287 | 102 | 316 | 1.44e-16 | 82.0 |
MS.gene23875.t1 | AT3G51340 | 27.556 | 225 | 145 | 6 | 71 | 287 | 102 | 316 | 1.48e-16 | 82.0 |
MS.gene23875.t1 | AT3G51350 | 25.670 | 261 | 165 | 9 | 71 | 322 | 101 | 341 | 1.65e-16 | 82.0 |
MS.gene23875.t1 | AT5G10760 | 24.047 | 341 | 221 | 11 | 33 | 365 | 92 | 402 | 4.75e-16 | 80.1 |
MS.gene23875.t1 | AT1G25510 | 25.225 | 333 | 211 | 11 | 56 | 380 | 133 | 435 | 8.51e-16 | 79.3 |
MS.gene23875.t1 | AT3G51330 | 26.524 | 328 | 203 | 15 | 71 | 384 | 101 | 404 | 1.57e-15 | 78.6 |
MS.gene23875.t1 | AT3G51330 | 26.524 | 328 | 203 | 15 | 71 | 384 | 101 | 404 | 1.67e-15 | 78.6 |
MS.gene23875.t1 | AT3G51330 | 26.524 | 328 | 203 | 15 | 71 | 384 | 101 | 404 | 1.77e-15 | 78.6 |
MS.gene23875.t1 | AT3G52500 | 25.714 | 350 | 197 | 13 | 68 | 379 | 86 | 410 | 2.31e-15 | 78.2 |
MS.gene23875.t1 | AT2G39710 | 26.007 | 273 | 161 | 12 | 76 | 332 | 69 | 316 | 9.41e-15 | 76.3 |
MS.gene23875.t1 | AT1G09750 | 27.044 | 318 | 190 | 15 | 69 | 373 | 101 | 389 | 2.29e-14 | 75.1 |
MS.gene23875.t1 | AT3G51360 | 26.102 | 295 | 179 | 11 | 114 | 392 | 9 | 280 | 7.63e-14 | 72.8 |
MS.gene23875.t1 | AT3G51360 | 26.102 | 295 | 179 | 11 | 114 | 392 | 9 | 280 | 7.63e-14 | 72.8 |
MS.gene23875.t1 | AT5G07030 | 27.726 | 321 | 188 | 17 | 72 | 381 | 115 | 402 | 1.83e-13 | 72.4 |
MS.gene23875.t1 | AT2G28225 | 26.861 | 309 | 183 | 17 | 71 | 371 | 66 | 339 | 2.87e-13 | 71.2 |
MS.gene23875.t1 | AT2G28010 | 24.601 | 313 | 181 | 13 | 71 | 371 | 64 | 333 | 4.17e-13 | 70.9 |
MS.gene23875.t1 | AT5G33340 | 27.687 | 307 | 193 | 12 | 70 | 366 | 88 | 375 | 7.46e-13 | 70.1 |
MS.gene23875.t1 | AT5G02190 | 24.812 | 266 | 166 | 10 | 81 | 332 | 82 | 327 | 1.57e-12 | 69.3 |
MS.gene23875.t1 | AT3G25700 | 31.655 | 139 | 86 | 5 | 70 | 206 | 82 | 213 | 1.39e-11 | 65.9 |
MS.gene23875.t1 | AT2G28030 | 25.962 | 312 | 178 | 16 | 71 | 371 | 60 | 329 | 1.81e-11 | 65.9 |
MS.gene23875.t1 | AT3G59080 | 24.217 | 351 | 183 | 11 | 70 | 400 | 168 | 455 | 4.49e-11 | 65.1 |
MS.gene23875.t1 | AT2G28220 | 24.104 | 307 | 194 | 14 | 71 | 371 | 66 | 339 | 9.09e-11 | 63.5 |
Find 95 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GACCTTGAAAATCAGGTTAT+TGG | 0.154528 | 7.1:+77170316 | MS.gene23875:CDS |
GCTAATGGAAGTGTTATATT+TGG | 0.167832 | 7.1:+77164944 | MS.gene23875:CDS |
AGGCTTTATTATGCGAAAAT+TGG | 0.187425 | 7.1:+77163255 | MS.gene23875:intron |
TATACATGCTTTCAATATTC+TGG | 0.202777 | 7.1:+77167652 | MS.gene23875:CDS |
ATGTTTGCTCATTGCTTAAA+TGG | 0.204920 | 7.1:+77166631 | MS.gene23875:CDS |
GAGCTCTGCAAAGAGATAAA+TGG | 0.267376 | 7.1:+77164776 | MS.gene23875:CDS |
AACAGTTACCCAACGGAATC+AGG | 0.288793 | 7.1:-77162995 | None:intergenic |
TATTATTTGCAAGTGGATAC+TGG | 0.306830 | 7.1:+77163300 | MS.gene23875:CDS |
TCAAAATAAAAGGTGACATT+TGG | 0.307429 | 7.1:-77168904 | None:intergenic |
CATTGCTTAAATGGAGTAAA+TGG | 0.311727 | 7.1:+77166640 | MS.gene23875:CDS |
ATGCATCTGTTGAGAGATTA+AGG | 0.311890 | 7.1:-77167412 | None:intergenic |
TAATGATTCCTGTCCATATC+TGG | 0.313898 | 7.1:+77164829 | MS.gene23875:CDS |
CTTAAAACTGCTTCAGCTAA+TGG | 0.313905 | 7.1:+77164929 | MS.gene23875:CDS |
CTTGATGGGATACTTGGATT+TGG | 0.329509 | 7.1:+77166553 | MS.gene23875:CDS |
CTATCAGCCATTAGTATATA+AGG | 0.334902 | 7.1:+77167505 | MS.gene23875:CDS |
TATTATGCGAAAATTGGAAT+TGG | 0.344165 | 7.1:+77163261 | MS.gene23875:CDS |
TCACCATATATCTCCAGATA+TGG | 0.375783 | 7.1:-77164842 | None:intergenic |
TGTCCATATCTGGAGATATA+TGG | 0.378802 | 7.1:+77164839 | MS.gene23875:CDS |
TTGAGAGATTAAGGAAAGTA+TGG | 0.379252 | 7.1:-77167403 | None:intergenic |
AGCTCTGCAAAGAGATAAAT+GGG | 0.379514 | 7.1:+77164777 | MS.gene23875:CDS |
ACAGGCGTCGACCTTCCTTT+AGG | 0.380959 | 7.1:+77162959 | MS.gene23875:CDS |
CTAATGGAAGTGTTATATTT+GGG | 0.387256 | 7.1:+77164945 | MS.gene23875:CDS |
GAAGCGCTTGATGGGATACT+TGG | 0.391907 | 7.1:+77166547 | MS.gene23875:CDS |
TTGTATACCTTATATACTAA+TGG | 0.394050 | 7.1:-77167512 | None:intergenic |
TGCAAATAATAATCCTTTGA+CGG | 0.409086 | 7.1:-77163288 | None:intergenic |
ATTTCACAACTTTCTTCCTC+TGG | 0.412257 | 7.1:+77166595 | MS.gene23875:CDS |
ATAGATCCCGTCTGGTAGAT+AGG | 0.419699 | 7.1:-77167486 | None:intergenic |
TGAAAATGGACTCTCCTTGA+AGG | 0.420116 | 7.1:+77168924 | MS.gene23875:CDS |
AACATAAAGGAATCTTCTTC+TGG | 0.424248 | 7.1:+77164731 | MS.gene23875:CDS |
GTACTATTTGATCAAGTGTC+CGG | 0.440924 | 7.1:+77164902 | MS.gene23875:CDS |
TCTTACGCTCTACAACATAA+AGG | 0.458427 | 7.1:+77164718 | MS.gene23875:CDS |
CTTCTTACGATTTCTACTGT+TGG | 0.461275 | 7.1:+77162830 | MS.gene23875:CDS |
GACCTTCCTTTAGGCGGCAC+CGG | 0.461843 | 7.1:+77162968 | MS.gene23875:CDS |
GGGCGGCCGGTGCCGCCTAA+AGG | 0.466817 | 7.1:-77162974 | None:intergenic |
ACCGGCCGCCCTGATTCCGT+TGG | 0.472236 | 7.1:+77162986 | MS.gene23875:CDS |
TCAAACGAAGAAGCGCTTGA+TGG | 0.488151 | 7.1:+77166538 | MS.gene23875:CDS |
TACTATTTGATCAAGTGTCC+GGG | 0.497694 | 7.1:+77164903 | MS.gene23875:CDS |
CACTGCAGGTTACTTTGTAA+AGG | 0.500888 | 7.1:+77164874 | MS.gene23875:CDS |
TAAACAAATACATACTGGTC+AGG | 0.506509 | 7.1:-77166724 | None:intergenic |
CCGGCCGCCCTGATTCCGTT+GGG | 0.514027 | 7.1:+77162987 | MS.gene23875:CDS |
TTATGCTGCAGTGTTGATGA+TGG | 0.516485 | 7.1:+77168877 | MS.gene23875:intron |
CTGAACAAAGAGACAGTAAA+GGG | 0.516859 | 7.1:+77167435 | MS.gene23875:CDS |
AGGTGTGGTGCTAGACAATC+TGG | 0.516990 | 7.1:+77166502 | MS.gene23875:intron |
GATCGTCGGAGAATTTGTAT+TGG | 0.517259 | 7.1:-77162877 | None:intergenic |
GACGTTGAAAACACCGTGGT+TGG | 0.518396 | 7.1:-77162855 | None:intergenic |
TTGAAAATCAGGTTATTGGA+TGG | 0.523428 | 7.1:+77170320 | MS.gene23875:CDS |
CTGTGAGAAGGGAGATTTGA+CGG | 0.523775 | 7.1:-77162940 | None:intergenic |
AATGGCTGATAGATCCCGTC+TGG | 0.526184 | 7.1:-77167494 | None:intergenic |
ATCGTGTGGATAAACCTTCA+AGG | 0.526209 | 7.1:-77168938 | None:intergenic |
TCTACTGTTGGCGCCAACCA+CGG | 0.529104 | 7.1:+77162842 | MS.gene23875:CDS |
ACATACTGGTCAGGTAATAA+CGG | 0.533478 | 7.1:-77166715 | None:intergenic |
CCCAACGGAATCAGGGCGGC+CGG | 0.534218 | 7.1:-77162987 | None:intergenic |
CAAACGAAGAAGCGCTTGAT+GGG | 0.535187 | 7.1:+77166539 | MS.gene23875:CDS |
GGCCGGTGCCGCCTAAAGGA+AGG | 0.538354 | 7.1:-77162970 | None:intergenic |
GAAGGTCGACGCCTGTGAGA+AGG | 0.543571 | 7.1:-77162952 | None:intergenic |
AAGGTCGACGCCTGTGAGAA+GGG | 0.544195 | 7.1:-77162951 | None:intergenic |
TGGAATTGGAACTCCGTCAA+AGG | 0.546019 | 7.1:+77163275 | MS.gene23875:CDS |
ATATATCTCCAGATATGGAC+AGG | 0.546608 | 7.1:-77164837 | None:intergenic |
CGTCAAATCTCCCTTCTCAC+AGG | 0.547578 | 7.1:+77162941 | MS.gene23875:CDS |
ACACCAAGGTTACTTCTAGT+AGG | 0.550642 | 7.1:-77163366 | None:intergenic |
GGAGGTGGTATATTTGCGAT+TGG | 0.555006 | 7.1:+77166661 | MS.gene23875:CDS |
GAAAGCATGTATACTCGTCA+TGG | 0.560971 | 7.1:-77167642 | None:intergenic |
GGTGATGGCAGCTCCACTGC+AGG | 0.561770 | 7.1:+77164860 | MS.gene23875:CDS |
AAAGGATTATTATTTGCAAG+TGG | 0.565196 | 7.1:+77163293 | MS.gene23875:CDS |
CATGCTTTCAATATTCTGGA+AGG | 0.569785 | 7.1:+77167656 | MS.gene23875:CDS |
AACATGACAGCGATTCAAGT+TGG | 0.572363 | 7.1:+77167380 | MS.gene23875:CDS |
CCCGTCTGGTAGATAGGCCA+AGG | 0.572658 | 7.1:-77167480 | None:intergenic |
ACAGTTACCCAACGGAATCA+GGG | 0.582244 | 7.1:-77162994 | None:intergenic |
TTAAATGGAGTAAATGGAGG+TGG | 0.590871 | 7.1:+77166646 | MS.gene23875:CDS |
AACGGAGTTGTGTTCACTGT+AGG | 0.594168 | 7.1:-77166697 | None:intergenic |
CTTTACAAAGTAACCTGCAG+TGG | 0.595178 | 7.1:-77164873 | None:intergenic |
GAGAGAACGTTGTTGATCGT+CGG | 0.596888 | 7.1:-77162891 | None:intergenic |
TCTGAACAAAGAGACAGTAA+AGG | 0.603889 | 7.1:+77167434 | MS.gene23875:CDS |
AATTGACAGTGGTACAACCT+TGG | 0.604621 | 7.1:+77167463 | MS.gene23875:CDS |
ACCTTGGCCTATCTACCAGA+CGG | 0.608325 | 7.1:+77167479 | MS.gene23875:CDS |
GGCGTCGACCTTCCTTTAGG+CGG | 0.608699 | 7.1:+77162962 | MS.gene23875:CDS |
TGTCCTACTAGAAGTAACCT+TGG | 0.614346 | 7.1:+77163363 | MS.gene23875:CDS |
TTGCAGAGCTCTTGATCACA+CGG | 0.617035 | 7.1:-77164764 | None:intergenic |
CCTTGGCCTATCTACCAGAC+GGG | 0.625442 | 7.1:+77167480 | MS.gene23875:CDS |
TATCTGGAGATATATGGTGA+TGG | 0.634106 | 7.1:+77164845 | MS.gene23875:CDS |
GAAAGAAACAAATAATCGTG+TGG | 0.635029 | 7.1:-77168952 | None:intergenic |
GTCATGTTGACACTGTAATG+TGG | 0.635815 | 7.1:-77167365 | None:intergenic |
TACTGGAACTGATATGATGT+GGG | 0.640658 | 7.1:+77163317 | MS.gene23875:CDS |
TTCATCGAGTATCAAAGTGA+GGG | 0.644299 | 7.1:+77170780 | MS.gene23875:CDS |
GTTCATCGAGTATCAAAGTG+AGG | 0.648643 | 7.1:+77170779 | MS.gene23875:CDS |
TGCTTAAATGGAGTAAATGG+AGG | 0.650674 | 7.1:+77166643 | MS.gene23875:CDS |
GTAGTCATGAGCTTTGAGAA+CGG | 0.656404 | 7.1:-77162915 | None:intergenic |
CTCTGCAAAGAGATAAATGG+GGG | 0.678698 | 7.1:+77164779 | MS.gene23875:CDS |
ACTATTTGATCAAGTGTCCG+GGG | 0.681013 | 7.1:+77164904 | MS.gene23875:CDS |
ATACTGGAACTGATATGATG+TGG | 0.690963 | 7.1:+77163316 | MS.gene23875:CDS |
AAAGGGACAATAATTGACAG+TGG | 0.722747 | 7.1:+77167452 | MS.gene23875:CDS |
GCTCTGCAAAGAGATAAATG+GGG | 0.754212 | 7.1:+77164778 | MS.gene23875:CDS |
GTTACCCAACGGAATCAGGG+CGG | 0.757473 | 7.1:-77162991 | None:intergenic |
TGAGAAGGGAGATTTGACGG+CGG | 0.801133 | 7.1:-77162937 | None:intergenic |
ATTGGACGTTGAAAACACCG+TGG | 0.813327 | 7.1:-77162859 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.1 | gene | 77162800 | 77170799 | 77162800 | ID=MS.gene23875 |
chr7.1 | mRNA | 77162800 | 77170799 | 77162800 | ID=MS.gene23875.t1;Parent=MS.gene23875 |
chr7.1 | exon | 77162800 | 77163008 | 77162800 | ID=MS.gene23875.t1.exon1;Parent=MS.gene23875.t1 |
chr7.1 | CDS | 77162800 | 77163008 | 77162800 | ID=cds.MS.gene23875.t1;Parent=MS.gene23875.t1 |
chr7.1 | exon | 77163257 | 77163386 | 77163257 | ID=MS.gene23875.t1.exon2;Parent=MS.gene23875.t1 |
chr7.1 | CDS | 77163257 | 77163386 | 77163257 | ID=cds.MS.gene23875.t1;Parent=MS.gene23875.t1 |
chr7.1 | exon | 77164713 | 77164966 | 77164713 | ID=MS.gene23875.t1.exon3;Parent=MS.gene23875.t1 |
chr7.1 | CDS | 77164713 | 77164966 | 77164713 | ID=cds.MS.gene23875.t1;Parent=MS.gene23875.t1 |
chr7.1 | exon | 77166504 | 77166731 | 77166504 | ID=MS.gene23875.t1.exon4;Parent=MS.gene23875.t1 |
chr7.1 | CDS | 77166504 | 77166731 | 77166504 | ID=cds.MS.gene23875.t1;Parent=MS.gene23875.t1 |
chr7.1 | exon | 77167364 | 77167526 | 77167364 | ID=MS.gene23875.t1.exon5;Parent=MS.gene23875.t1 |
chr7.1 | CDS | 77167364 | 77167526 | 77167364 | ID=cds.MS.gene23875.t1;Parent=MS.gene23875.t1 |
chr7.1 | exon | 77167604 | 77167677 | 77167604 | ID=MS.gene23875.t1.exon6;Parent=MS.gene23875.t1 |
chr7.1 | CDS | 77167604 | 77167677 | 77167604 | ID=cds.MS.gene23875.t1;Parent=MS.gene23875.t1 |
chr7.1 | exon | 77168888 | 77168975 | 77168888 | ID=MS.gene23875.t1.exon7;Parent=MS.gene23875.t1 |
chr7.1 | CDS | 77168888 | 77168975 | 77168888 | ID=cds.MS.gene23875.t1;Parent=MS.gene23875.t1 |
chr7.1 | exon | 77170284 | 77170355 | 77170284 | ID=MS.gene23875.t1.exon8;Parent=MS.gene23875.t1 |
chr7.1 | CDS | 77170284 | 77170355 | 77170284 | ID=cds.MS.gene23875.t1;Parent=MS.gene23875.t1 |
chr7.1 | exon | 77170779 | 77170799 | 77170779 | ID=MS.gene23875.t1.exon9;Parent=MS.gene23875.t1 |
chr7.1 | CDS | 77170779 | 77170799 | 77170779 | ID=cds.MS.gene23875.t1;Parent=MS.gene23875.t1 |
Gene Sequence |
Protein sequence |