Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024595.t1 | XP_003626390.1 | 98.5 | 959 | 11 | 2 | 1 | 959 | 1 | 956 | 0.00E+00 | 1953.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024595.t1 | Q9FQ04 | 65.8 | 964 | 288 | 15 | 1 | 947 | 1 | 939 | 0.0e+00 | 1235.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024595.t1 | G7L0T7 | 98.5 | 959 | 11 | 2 | 1 | 959 | 1 | 956 | 0.0e+00 | 1953.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene024595 | MS.gene48145 | PPI |
| MS.gene46845 | MS.gene024595 | PPI |
| MS.gene019784 | MS.gene024595 | PPI |
| MS.gene024595 | MS.gene03346 | PPI |
| MS.gene64000 | MS.gene024595 | PPI |
| MS.gene024595 | MS.gene85722 | PPI |
| MS.gene024595 | MS.gene39725 | PPI |
| MS.gene24174 | MS.gene024595 | PPI |
| MS.gene80364 | MS.gene024595 | PPI |
| MS.gene024595 | MS.gene64202 | PPI |
| MS.gene27050 | MS.gene024595 | PPI |
| MS.gene024595 | MS.gene03315 | PPI |
| MS.gene024595 | MS.gene57277 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024595.t1 | MTR_7g114570 | 98.540 | 959 | 11 | 2 | 1 | 959 | 1 | 956 | 0.0 | 1972 |
| MS.gene024595.t1 | MTR_7g114570 | 97.497 | 959 | 10 | 3 | 1 | 959 | 1 | 945 | 0.0 | 1943 |
| MS.gene024595.t1 | MTR_4g051920 | 41.760 | 807 | 302 | 18 | 1 | 730 | 1 | 716 | 0.0 | 580 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024595.t1 | AT1G54490 | 65.907 | 965 | 285 | 17 | 1 | 947 | 1 | 939 | 0.0 | 1219 |
| MS.gene024595.t1 | AT1G54490 | 65.140 | 895 | 269 | 16 | 71 | 947 | 12 | 881 | 0.0 | 1108 |
| MS.gene024595.t1 | AT1G75660 | 68.585 | 417 | 127 | 2 | 1 | 415 | 1 | 415 | 0.0 | 562 |
| MS.gene024595.t1 | AT1G75660 | 52.089 | 359 | 155 | 3 | 439 | 781 | 529 | 886 | 1.67e-119 | 390 |
| MS.gene024595.t1 | AT5G42540 | 61.312 | 442 | 162 | 4 | 1 | 436 | 1 | 439 | 5.94e-174 | 533 |
| MS.gene024595.t1 | AT5G42540 | 47.647 | 340 | 161 | 4 | 439 | 765 | 521 | 856 | 1.35e-97 | 330 |
| MS.gene024595.t1 | AT5G42540 | 61.312 | 442 | 162 | 4 | 1 | 436 | 1 | 439 | 8.68e-174 | 533 |
| MS.gene024595.t1 | AT5G42540 | 46.154 | 351 | 161 | 5 | 439 | 765 | 521 | 867 | 1.13e-94 | 322 |
Find 258 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGGCAAATGACTATAATTT+TGG | 0.185475 | 7.2:+2744411 | None:intergenic |
| AGAACGTTGCTGGTTCATTT+TGG | 0.201126 | 7.2:+2751021 | None:intergenic |
| TACTCCTGGCACTCCGTTTA+TGG | 0.213287 | 7.2:-2750784 | MS.gene024595:CDS |
| GACCAATGTTCTGGACAAAT+TGG | 0.222972 | 7.2:+2742889 | None:intergenic |
| ATTCACAGTTTCTTCACATT+TGG | 0.227269 | 7.2:-2749956 | MS.gene024595:intron |
| GGAGCTTTACTAATCCAATT+TGG | 0.241712 | 7.2:+2742852 | None:intergenic |
| TACAAACAGTGTCGAGTATT+TGG | 0.243130 | 7.2:+2750465 | None:intergenic |
| ACTACACCATCCGGAGGTTT+TGG | 0.243525 | 7.2:+2744035 | None:intergenic |
| ATTCTTCAATTCTATCCTTC+TGG | 0.261931 | 7.2:-2745042 | MS.gene024595:intron |
| TCCCCTGTTCTGGCATATCT+TGG | 0.272823 | 7.2:+2742730 | None:intergenic |
| CTCCTATACCACCTCCAAAT+TGG | 0.275309 | 7.2:-2742866 | MS.gene024595:CDS |
| TTAATGAGGCCGCAAAATTC+AGG | 0.283080 | 7.2:-2742933 | MS.gene024595:CDS |
| AATCAAGCATCTTACTATTT+CGG | 0.293526 | 7.2:+2744486 | None:intergenic |
| CTTTCTGATTCAAATGTTCC+TGG | 0.295528 | 7.2:-2750549 | MS.gene024595:CDS |
| TCTGGATCTGGAAAATATTA+TGG | 0.295965 | 7.2:-2743197 | MS.gene024595:CDS |
| GTATTTCTATGTTTCTTTGT+TGG | 0.300901 | 7.2:-2749849 | MS.gene024595:CDS |
| TGATATTTCTTCTTGTGAAT+TGG | 0.301092 | 7.2:+2750069 | None:intergenic |
| TTCACAGTTTCTTCACATTT+GGG | 0.301736 | 7.2:-2749955 | MS.gene024595:intron |
| CACCATTGATTCCCCTGTTC+TGG | 0.308473 | 7.2:+2742720 | None:intergenic |
| AAGGCCTTTGTTGGGTTTGC+CGG | 0.311591 | 7.2:-2746584 | MS.gene024595:CDS |
| CGATTACAGCGTAACCTTCC+TGG | 0.313558 | 7.2:-2750495 | MS.gene024595:CDS |
| AAAATGACAGACAGAATATT+AGG | 0.314810 | 7.2:-2743085 | MS.gene024595:CDS |
| GGTTTGCCGGTATTACTATC+AGG | 0.330788 | 7.2:-2746571 | MS.gene024595:CDS |
| ATCAAATCACGATATCTTTC+AGG | 0.331323 | 7.2:+2745084 | None:intergenic |
| CCCCTGTTCTGGCATATCTT+GGG | 0.336266 | 7.2:+2742731 | None:intergenic |
| ACTGAGGCACGTGGCTCTTC+AGG | 0.339418 | 7.2:+2747602 | None:intergenic |
| TGCCAACCATTAGACGCTAT+TGG | 0.340067 | 7.2:+2743107 | None:intergenic |
| GAGGAATCAAGTGCTTATTA+TGG | 0.352227 | 7.2:-2743173 | MS.gene024595:CDS |
| AATACTCGACACTGTTTGTA+TGG | 0.352561 | 7.2:-2750462 | MS.gene024595:CDS |
| ACCAATGTTCTGGACAAATT+GGG | 0.352870 | 7.2:+2742890 | None:intergenic |
| AATTTGGTACACTTTCTTGA+TGG | 0.355624 | 7.2:+2742767 | None:intergenic |
| AGGTTTCACACCTTCATCTA+TGG | 0.356467 | 7.2:+2742998 | None:intergenic |
| GCATACATTCCATTCGTATC+TGG | 0.361107 | 7.2:+2742831 | None:intergenic |
| AACTCCATGCCGTTGGGATT+AGG | 0.365006 | 7.2:+2752385 | None:intergenic |
| TACCTAGCACTTGGGTCAAT+TGG | 0.371281 | 7.2:+2744368 | None:intergenic |
| TTAATTCTCTCAATCTCCTC+TGG | 0.372214 | 7.2:+2747303 | None:intergenic |
| TCTTAAAGATTTAGCTGATC+TGG | 0.373125 | 7.2:-2745267 | MS.gene024595:CDS |
| CAGTTCCACAACATGAAAAC+TGG | 0.377145 | 7.2:-2743035 | MS.gene024595:CDS |
| TTATTATCTCAGGTTAAGTT+AGG | 0.377389 | 7.2:-2747378 | MS.gene024595:intron |
| CCAACTGGAGCCTCTGGATC+TGG | 0.378902 | 7.2:-2743209 | MS.gene024595:CDS |
| AGGTATTATGCCGAAAAGTT+TGG | 0.379144 | 7.2:-2747336 | MS.gene024595:CDS |
| GATATCCTGCAGGCCTTTGA+TGG | 0.379781 | 7.2:+2744191 | None:intergenic |
| AATGGATTCTCACCTTTCTC+TGG | 0.387851 | 7.2:+2743698 | None:intergenic |
| AAGCTTCTTTATCTTGCAAT+TGG | 0.388287 | 7.2:-2751534 | MS.gene024595:intron |
| TTCAATAATAATACATCCTA+TGG | 0.388452 | 7.2:-2743278 | MS.gene024595:CDS |
| GGCCTCATTAACATCATTGC+AGG | 0.394258 | 7.2:+2742945 | None:intergenic |
| TTGTATGATGGCTTGGAAAC+TGG | 0.396318 | 7.2:+2743246 | None:intergenic |
| CTTGGGTCAATTGGCAGAAC+AGG | 0.400438 | 7.2:+2744377 | None:intergenic |
| TCCCCAAGATATGCCAGAAC+AGG | 0.400629 | 7.2:-2742733 | MS.gene024595:CDS |
| GTATAGGAGGACCAATGTTC+TGG | 0.401365 | 7.2:+2742880 | None:intergenic |
| TGGGGACTCTACCCTCTTCA+AGG | 0.402481 | 7.2:-2745196 | MS.gene024595:intron |
| CGGAGGACCGCCGGCGACGG+AGG | 0.402724 | 7.2:+2752429 | None:intergenic |
| TAATACATCCTATGGATTAC+CGG | 0.403296 | 7.2:-2743270 | MS.gene024595:CDS |
| ATGAACAGGGTCAGACCAAC+TGG | 0.404880 | 7.2:-2743224 | MS.gene024595:CDS |
| GACAAATTGGGGTTGTAGAT+TGG | 0.412033 | 7.2:+2742902 | None:intergenic |
| CAGCTGCAAGATGGCCAACT+TGG | 0.412270 | 7.2:+2750145 | None:intergenic |
| TGATTTAAATACATCATCAT+AGG | 0.412508 | 7.2:+2751602 | None:intergenic |
| CAAGCCATCATACAATGAAC+AGG | 0.414857 | 7.2:-2743238 | MS.gene024595:CDS |
| TTAAACCTCTGCCTGTGTTA+TGG | 0.418218 | 7.2:-2743749 | MS.gene024595:CDS |
| TGATTTGATTATGTTGTCCT+TGG | 0.423279 | 7.2:-2750331 | MS.gene024595:CDS |
| TCGATCTCAAACGGAGGGTC+AGG | 0.423399 | 7.2:+2749897 | None:intergenic |
| AATTCACAAGAAGAAATATC+AGG | 0.424390 | 7.2:-2750067 | MS.gene024595:intron |
| CGAGGGAGAACATAAAATAA+TGG | 0.425845 | 7.2:-2750526 | MS.gene024595:CDS |
| GTCAGACCAACTGGAGCCTC+TGG | 0.428142 | 7.2:-2743215 | MS.gene024595:CDS |
| TTTGACACATCGACGGGAAA+CGG | 0.431095 | 7.2:+2752409 | None:intergenic |
| ACCGACAGCACTGCCATAAA+CGG | 0.431261 | 7.2:+2750771 | None:intergenic |
| AGATTTCCAATAGCGTCTAA+TGG | 0.433972 | 7.2:-2743113 | MS.gene024595:CDS |
| TGACCCTGTTCATTGTATGA+TGG | 0.435141 | 7.2:+2743234 | None:intergenic |
| ATTTGGTACACTTTCTTGAT+GGG | 0.436610 | 7.2:+2742768 | None:intergenic |
| ATCTTAATCCTCGCAGTCAT+AGG | 0.438296 | 7.2:-2744064 | MS.gene024595:CDS |
| CCCTGTTCTGGCATATCTTG+GGG | 0.444289 | 7.2:+2742732 | None:intergenic |
| TTCTCCCATCAAAGGCCTGC+AGG | 0.445200 | 7.2:-2744196 | MS.gene024595:CDS |
| ATCCAATTTGGAGGTGGTAT+AGG | 0.448508 | 7.2:+2742864 | None:intergenic |
| GACACTTGAAGGCACATTAA+CGG | 0.452556 | 7.2:-2744721 | MS.gene024595:intron |
| ATTGATGCATATCTATAGAA+AGG | 0.458601 | 7.2:-2749563 | MS.gene024595:CDS |
| GCAAGATAAAGAAGCTTCCT+TGG | 0.459474 | 7.2:+2751540 | None:intergenic |
| TCTGCCACAAGGACACTTGA+AGG | 0.459913 | 7.2:-2744732 | MS.gene024595:CDS |
| TTAGACGCTATTGGAAATCT+AGG | 0.460140 | 7.2:+2743116 | None:intergenic |
| CACATTCACTACCTAGCACT+TGG | 0.462129 | 7.2:+2744359 | None:intergenic |
| AGGCCTGGTCATCATGCCCT+GGG | 0.464073 | 7.2:+2743136 | None:intergenic |
| AATATGTAGAAGGCCTTTGT+TGG | 0.464735 | 7.2:-2746593 | MS.gene024595:CDS |
| GAAGGATAGAATTGAAGAAT+AGG | 0.464894 | 7.2:+2745045 | None:intergenic |
| AAACGGAGGACCGCCGGCGA+CGG | 0.465435 | 7.2:+2752426 | None:intergenic |
| CAGGTACCTGGAGCAATTGC+CGG | 0.467382 | 7.2:-2743350 | MS.gene024595:CDS |
| ACCTTCGTATTCCGCCAGCC+CGG | 0.467919 | 7.2:+2750708 | None:intergenic |
| CAGACAGAATATTAGGATAC+AGG | 0.472854 | 7.2:-2743078 | MS.gene024595:CDS |
| AGGACCGCCGGCGACGGAGG+GGG | 0.473796 | 7.2:+2752432 | None:intergenic |
| TGAATTGGAGTATCGTCAAC+AGG | 0.474275 | 7.2:+2750084 | None:intergenic |
| GCTGAGTGTCGCGGTAAGCC+AGG | 0.474429 | 7.2:-2750126 | MS.gene024595:CDS |
| AAATATTTCAGAAACGAGTT+CGG | 0.475523 | 7.2:-2749255 | MS.gene024595:CDS |
| GGAGGACCGCCGGCGACGGA+GGG | 0.475693 | 7.2:+2752430 | None:intergenic |
| CAGAAGCAAAAGGAGCATAA+TGG | 0.476071 | 7.2:+2745291 | None:intergenic |
| AGGGTGTCTGCTCGTGGCAG+TGG | 0.476697 | 7.2:-2746551 | MS.gene024595:intron |
| TAACACTTCTCTTGTTGTCC+AGG | 0.476772 | 7.2:+2750177 | None:intergenic |
| CAGGCAGAGGTTTAATATCA+AGG | 0.477111 | 7.2:+2743757 | None:intergenic |
| TAGTCTCAAGAATTCAATGA+AGG | 0.478468 | 7.2:-2747653 | MS.gene024595:CDS |
| ATCCCCAGGGCATGATGACC+AGG | 0.479247 | 7.2:-2743139 | MS.gene024595:CDS |
| CCTTCGTATTCCGCCAGCCC+GGG | 0.479777 | 7.2:+2750709 | None:intergenic |
| TAAGCCAGGTGATAATGCTT+TGG | 0.479822 | 7.2:-2750112 | MS.gene024595:CDS |
| AATTGAAGAATAGGCGATGA+AGG | 0.481600 | 7.2:+2745054 | None:intergenic |
| TCGACACTGTTTGTATGGAT+TGG | 0.482715 | 7.2:-2750457 | MS.gene024595:intron |
| ATTGGCAGTGATGGTATGAA+TGG | 0.484630 | 7.2:-2744264 | MS.gene024595:intron |
| TCCGTTTATGGCAGTGCTGT+CGG | 0.485088 | 7.2:-2750772 | MS.gene024595:CDS |
| TCATCATAGGTAGCAGGTGC+TGG | 0.485723 | 7.2:+2751615 | None:intergenic |
| TAGGCCTGGTCATCATGCCC+TGG | 0.486990 | 7.2:+2743135 | None:intergenic |
| GGAGTTCGATAACTTATACT+TGG | 0.488403 | 7.2:-2752368 | MS.gene024595:CDS |
| CAAGCTTTGACCATAGATGA+AGG | 0.490894 | 7.2:-2743008 | MS.gene024595:CDS |
| TGGGGCATTACTACACCATC+CGG | 0.491569 | 7.2:+2744026 | None:intergenic |
| TTATCGAACTCCATGCCGTT+GGG | 0.492570 | 7.2:+2752379 | None:intergenic |
| GTCCCCATGAGCTGATCAAA+TGG | 0.493134 | 7.2:+2745212 | None:intergenic |
| CTCATCAATGAACGGCAGCT+TGG | 0.494477 | 7.2:+2744767 | None:intergenic |
| CAGACCATTTGATCAGCTCA+TGG | 0.499785 | 7.2:-2745216 | MS.gene024595:CDS |
| CGCTCAAAGTCGATCTCAAA+CGG | 0.499880 | 7.2:+2749888 | None:intergenic |
| TGATACATCTCACAGACAAC+AGG | 0.500487 | 7.2:-2743369 | MS.gene024595:intron |
| GACATTTGAGTCATGAGTCT+CGG | 0.501740 | 7.2:+2750809 | None:intergenic |
| GGCGGCATCAAGCCAGAGAA+AGG | 0.502510 | 7.2:-2743710 | MS.gene024595:intron |
| TGGTAATAGAATAAGATATG+TGG | 0.504401 | 7.2:+2744431 | None:intergenic |
| ATCTCTAATGTTGGCATATG+CGG | 0.504727 | 7.2:+2749813 | None:intergenic |
| CGCTATTGGAAATCTAGGCC+TGG | 0.505373 | 7.2:+2743121 | None:intergenic |
| CTGTTCATTGTATGATGGCT+TGG | 0.507450 | 7.2:+2743239 | None:intergenic |
| CAGGTTAAGTTAGGACAGCC+TGG | 0.507922 | 7.2:-2747369 | MS.gene024595:CDS |
| GAAAACGGCGAGAACGTTGC+TGG | 0.509480 | 7.2:+2751011 | None:intergenic |
| TAATACCTTTCCGTGTATCC+AGG | 0.510288 | 7.2:+2747351 | None:intergenic |
| ATATGTAGAAGGCCTTTGTT+GGG | 0.511102 | 7.2:-2746592 | MS.gene024595:CDS |
| GCAAAAGGAGCATAATGGTA+CGG | 0.511773 | 7.2:+2745296 | None:intergenic |
| TGTCAGCCGTGCACATAAGT+TGG | 0.511844 | 7.2:-2744456 | MS.gene024595:CDS |
| TGAGGACCGGCAATTGCTCC+AGG | 0.514168 | 7.2:+2743344 | None:intergenic |
| GACGGGAAACGGAGGACCGC+CGG | 0.514327 | 7.2:+2752420 | None:intergenic |
| ACTGCCATAAACGGAGTGCC+AGG | 0.515997 | 7.2:+2750780 | None:intergenic |
| TGCCAGAACAGGGGAATCAA+TGG | 0.516588 | 7.2:-2742722 | MS.gene024595:CDS |
| GACTCAAATGTCATTACTCC+TGG | 0.520070 | 7.2:-2750798 | MS.gene024595:CDS |
| AGGGTAGGTACCTTGCCGTC+AGG | 0.521525 | 7.2:+2752313 | None:intergenic |
| ATGTATTATTATTGAACTGA+AGG | 0.522005 | 7.2:+2743285 | None:intergenic |
| TTCCAATAGCGTCTAATGGT+TGG | 0.525742 | 7.2:-2743109 | MS.gene024595:CDS |
| TAGAAAGGAATTCACTGCCA+TGG | 0.526115 | 7.2:-2749548 | MS.gene024595:CDS |
| TAGGTCTTGAAATATGTAGA+AGG | 0.530422 | 7.2:-2746603 | MS.gene024595:CDS |
| CCAGATCCAGAGGCTCCAGT+TGG | 0.530814 | 7.2:+2743209 | None:intergenic |
| TCTCACAGACAACAGGTACC+TGG | 0.531308 | 7.2:-2743362 | MS.gene024595:intron |
| GTTTGCCGGTATTACTATCA+GGG | 0.531517 | 7.2:-2746570 | MS.gene024595:CDS |
| GGTATCGATCCGCGAGCCAC+CGG | 0.532989 | 7.2:+2752491 | None:intergenic |
| GCAATTGCCGGTCCTCAACT+AGG | 0.533055 | 7.2:-2743338 | MS.gene024595:CDS |
| AGACCATTTGATCAGCTCAT+GGG | 0.534344 | 7.2:-2745215 | MS.gene024595:CDS |
| GACATCAAGAAACTGCAGTA+GGG | 0.534557 | 7.2:-2742806 | MS.gene024595:CDS |
| TTACTAATCCAATTTGGAGG+TGG | 0.535998 | 7.2:+2742858 | None:intergenic |
| GCTTTACTAATCCAATTTGG+AGG | 0.536084 | 7.2:+2742855 | None:intergenic |
| TAATGAGGCCGCAAAATTCA+GGG | 0.536538 | 7.2:-2742932 | MS.gene024595:CDS |
| TGGTGTAGTAATGCCCCAAA+AGG | 0.537759 | 7.2:-2744021 | MS.gene024595:intron |
| CCCCAAGATATGCCAGAACA+GGG | 0.538983 | 7.2:-2742732 | MS.gene024595:CDS |
| TATGGCATGAAGACAATAGT+AGG | 0.540298 | 7.2:-2743731 | MS.gene024595:CDS |
| AGCTGATCAAATGGTCTGAA+TGG | 0.541287 | 7.2:+2745221 | None:intergenic |
| CATCCTTGTTTCCATCCTGA+CGG | 0.542469 | 7.2:-2752328 | MS.gene024595:CDS |
| CAAAAGGAGCATAATGGTAC+GGG | 0.542488 | 7.2:+2745297 | None:intergenic |
| GTTATCGAACTCCATGCCGT+TGG | 0.543232 | 7.2:+2752378 | None:intergenic |
| GATTCAAATGTTCCTGGCGA+GGG | 0.544437 | 7.2:-2750543 | MS.gene024595:CDS |
| AAGCTGAAGAGGAAAGGCTT+AGG | 0.544883 | 7.2:-2750878 | MS.gene024595:CDS |
| CCAATGTTCTGGACAAATTG+GGG | 0.547336 | 7.2:+2742891 | None:intergenic |
| TGGACAAAATTACAATCCCC+AGG | 0.548411 | 7.2:-2743153 | MS.gene024595:CDS |
| CGAGTATTTGGATCGAAACC+AGG | 0.549757 | 7.2:+2750477 | None:intergenic |
| AATACATCATCATAGGTAGC+AGG | 0.550117 | 7.2:+2751609 | None:intergenic |
| GGGATGAGAGCTAGAGCAAG+AGG | 0.552834 | 7.2:-2747632 | MS.gene024595:CDS |
| TCTTTAAGATCAGAAGCAAA+AGG | 0.552972 | 7.2:+2745281 | None:intergenic |
| CCCCAATTTGTCCAGAACAT+TGG | 0.553860 | 7.2:-2742891 | MS.gene024595:CDS |
| TTATCTTACTGATGCGGGTG+AGG | 0.554390 | 7.2:-2749521 | MS.gene024595:intron |
| GAAACGAGTTCGGATTCAGC+AGG | 0.555899 | 7.2:-2749245 | MS.gene024595:intron |
| ATGAATCTCGTGTGTAGCCA+AGG | 0.557308 | 7.2:+2750314 | None:intergenic |
| TGATGGCTTGGAAACTGGTC+CGG | 0.558438 | 7.2:+2743251 | None:intergenic |
| CGCGACACTCAGCTGCAAGA+TGG | 0.559174 | 7.2:+2750136 | None:intergenic |
| ATATCCTGCAGGCCTTTGAT+GGG | 0.559807 | 7.2:+2744192 | None:intergenic |
| CACCTGCAATGATGTTAATG+AGG | 0.560222 | 7.2:-2742947 | MS.gene024595:CDS |
| AGAAAGGAATTCACTGCCAT+GGG | 0.560446 | 7.2:-2749547 | MS.gene024595:CDS |
| AGTCTCAAGAATTCAATGAA+GGG | 0.562373 | 7.2:-2747652 | MS.gene024595:CDS |
| TAGGCATATCCCAAAACCTC+CGG | 0.564951 | 7.2:-2744045 | MS.gene024595:CDS |
| CAATTTGGAGGTGGTATAGG+AGG | 0.567567 | 7.2:+2742867 | None:intergenic |
| AACTAGATTGAATTACAACC+CGG | 0.568042 | 7.2:-2750727 | MS.gene024595:CDS |
| TAGATGAAGGTGTGAAACCT+AGG | 0.570341 | 7.2:-2742995 | MS.gene024595:CDS |
| AGAACAGGTCTTTGTTGATG+AGG | 0.571558 | 7.2:+2744392 | None:intergenic |
| GATTGAATTACAACCCGGGC+TGG | 0.572355 | 7.2:-2750722 | MS.gene024595:CDS |
| GATTACACGCGATATCCTGC+AGG | 0.573047 | 7.2:+2744181 | None:intergenic |
| TGCTTCTCCTAGTTGAGGAC+CGG | 0.574623 | 7.2:+2743331 | None:intergenic |
| ACCTCACGTATCTCTAATGT+TGG | 0.575885 | 7.2:+2749804 | None:intergenic |
| TGTATTATTATTGAACTGAA+GGG | 0.576496 | 7.2:+2743286 | None:intergenic |
| AACTTATACTTGGACATGAA+CGG | 0.578215 | 7.2:-2752358 | MS.gene024595:CDS |
| TCATGCCATAACACAGGCAG+AGG | 0.578423 | 7.2:+2743744 | None:intergenic |
| GAGGACCGCCGGCGACGGAG+GGG | 0.579167 | 7.2:+2752431 | None:intergenic |
| GACCATTTGATCAGCTCATG+GGG | 0.580363 | 7.2:-2745214 | MS.gene024595:CDS |
| CAGTCCAAAGCATTATCACC+TGG | 0.580913 | 7.2:+2750108 | None:intergenic |
| AGACACCCTGATAGTAATAC+CGG | 0.582543 | 7.2:+2746565 | None:intergenic |
| AGACATCAAGAAACTGCAGT+AGG | 0.582649 | 7.2:-2742807 | MS.gene024595:CDS |
| GTTAGGACAGCCTGGATACA+CGG | 0.583378 | 7.2:-2747361 | MS.gene024595:CDS |
| GGTGGTTATCTTACTGATGC+GGG | 0.587695 | 7.2:-2749526 | MS.gene024595:CDS |
| CTGAACCTTGTCTACAACTG+AGG | 0.588103 | 7.2:+2747586 | None:intergenic |
| AGGCAGAGGTTTAATATCAA+GGG | 0.588405 | 7.2:+2743758 | None:intergenic |
| ACATTACTATATTACCTGCC+AGG | 0.589775 | 7.2:+2744905 | None:intergenic |
| AACTTCTTCTCATCAATGAA+CGG | 0.590941 | 7.2:+2744759 | None:intergenic |
| GTCGAACCAATGAAAAGAGA+TGG | 0.591397 | 7.2:+2751562 | None:intergenic |
| AAACTGGTCCGGTAATCCAT+AGG | 0.592591 | 7.2:+2743262 | None:intergenic |
| TGATTCAAATGTTCCTGGCG+AGG | 0.594338 | 7.2:-2750544 | MS.gene024595:CDS |
| AGAAGTTGCTTTCTGCCACA+AGG | 0.595457 | 7.2:-2744743 | MS.gene024595:CDS |
| ACATCAAGAAACTGCAGTAG+GGG | 0.596033 | 7.2:-2742805 | MS.gene024595:CDS |
| TTGTTTCCATCCTGACGGCA+AGG | 0.598464 | 7.2:-2752323 | MS.gene024595:intron |
| TAGGTACCTTGCCGTCAGGA+TGG | 0.599091 | 7.2:+2752317 | None:intergenic |
| GTTGTATCTTCTCCCATCAA+AGG | 0.603496 | 7.2:-2744204 | MS.gene024595:CDS |
| GACACATCGACGGGAAACGG+AGG | 0.603591 | 7.2:+2752412 | None:intergenic |
| TGCCAATTGACCCAAGTGCT+AGG | 0.604527 | 7.2:-2744370 | MS.gene024595:intron |
| TCAAAGTCGATCTCAAACGG+AGG | 0.605414 | 7.2:+2749891 | None:intergenic |
| AAAACCTAATCCCAACGGCA+TGG | 0.605797 | 7.2:-2752389 | MS.gene024595:CDS |
| TGTTACATGTGTGGCCAAGT+TGG | 0.606147 | 7.2:-2750159 | MS.gene024595:CDS |
| TGAGCTGCTTCTCCTAGTTG+AGG | 0.606700 | 7.2:+2743326 | None:intergenic |
| AGCCGCAAAAGATGCAGCTG+AGG | 0.609306 | 7.2:-2750987 | MS.gene024595:CDS |
| TGAATTACAACCCGGGCTGG+CGG | 0.613944 | 7.2:-2750719 | MS.gene024595:CDS |
| TGTAGGAAGCTGAAGAGGAA+AGG | 0.613961 | 7.2:-2750884 | MS.gene024595:intron |
| ACTATCAGGGTGTCTGCTCG+TGG | 0.614258 | 7.2:-2746557 | MS.gene024595:CDS |
| CATCTTGCAGCTGAGTGTCG+CGG | 0.617157 | 7.2:-2750135 | MS.gene024595:CDS |
| CAGGTGATAATGCTTTGGAC+TGG | 0.618608 | 7.2:-2750107 | MS.gene024595:CDS |
| ATCTGGAAAATATTATGGTG+AGG | 0.619282 | 7.2:-2743192 | MS.gene024595:CDS |
| GGGTGGTTATCTTACTGATG+CGG | 0.619734 | 7.2:-2749527 | MS.gene024595:CDS |
| GAAGGCACTGCAGATGACCT+AGG | 0.620782 | 7.2:+2742978 | None:intergenic |
| ATCAGTAAGATAACCACCCA+TGG | 0.620991 | 7.2:+2749531 | None:intergenic |
| CGACGTCGACAATAGATCGC+GGG | 0.623019 | 7.2:+2752470 | None:intergenic |
| ATCTATTGTCGACGTCGTGG+AGG | 0.624264 | 7.2:-2752464 | MS.gene024595:CDS |
| TTGCCGTCAGGATGGAAACA+AGG | 0.625065 | 7.2:+2752325 | None:intergenic |
| AGTAAAGCTCCAGATACGAA+TGG | 0.625953 | 7.2:-2742840 | MS.gene024595:CDS |
| AAGGAATTCACTGCCATGGG+TGG | 0.626307 | 7.2:-2749544 | MS.gene024595:CDS |
| TGTGCCTTCAAGTGTCCTTG+TGG | 0.630317 | 7.2:+2744728 | None:intergenic |
| AGAATATTAGGATACAGGAT+AGG | 0.631548 | 7.2:-2743073 | MS.gene024595:CDS |
| AGGTGAAGAAACCTTGAAGA+GGG | 0.634776 | 7.2:+2745185 | None:intergenic |
| GCGAGCCACCGGTAAAACGC+TGG | 0.635276 | 7.2:+2752502 | None:intergenic |
| GCGATCTATTGTCGACGTCG+TGG | 0.635340 | 7.2:-2752467 | MS.gene024595:CDS |
| CAAAGTCGATCTCAAACGGA+GGG | 0.636831 | 7.2:+2749892 | None:intergenic |
| GGTGTTGTAGGAAGCTGAAG+AGG | 0.639395 | 7.2:-2750889 | MS.gene024595:intron |
| ACATTCACTACCTAGCACTT+GGG | 0.641918 | 7.2:+2744360 | None:intergenic |
| CCCGGGCTGGCGGAATACGA+AGG | 0.643900 | 7.2:-2750709 | MS.gene024595:intron |
| GAAGGGAGTTTCTGACAAGA+CGG | 0.646157 | 7.2:+2743303 | None:intergenic |
| TATTTGGATCGAAACCAGGA+AGG | 0.646867 | 7.2:+2750481 | None:intergenic |
| CATCAAGAAACTGCAGTAGG+GGG | 0.655948 | 7.2:-2742804 | MS.gene024595:CDS |
| GTTTGGTGCATCAGATCCAG+AGG | 0.659389 | 7.2:-2747319 | MS.gene024595:CDS |
| GAGGTGAAGAAACCTTGAAG+AGG | 0.661542 | 7.2:+2745184 | None:intergenic |
| GTTTATGGCAGTGCTGTCGG+TGG | 0.661728 | 7.2:-2750769 | MS.gene024595:CDS |
| ACGTGCCTCAGTTGTAGACA+AGG | 0.662085 | 7.2:-2747591 | MS.gene024595:intron |
| CAAGAGAAGTGTTACATGTG+TGG | 0.668111 | 7.2:-2750168 | MS.gene024595:CDS |
| GGCCTGGTCATCATGCCCTG+GGG | 0.669216 | 7.2:+2743137 | None:intergenic |
| GTGTCAAAACCTAATCCCAA+CGG | 0.670233 | 7.2:-2752394 | MS.gene024595:CDS |
| CATATCCCAAAACCTCCGGA+TGG | 0.671077 | 7.2:-2744041 | MS.gene024595:CDS |
| GGCATTACTACACCATCCGG+AGG | 0.673114 | 7.2:+2744029 | None:intergenic |
| GGACAAAATTACAATCCCCA+GGG | 0.673297 | 7.2:-2743152 | MS.gene024595:CDS |
| GTGGAACCAACTTATGTGCA+CGG | 0.675740 | 7.2:+2744450 | None:intergenic |
| GACAGCCTGGATACACGGAA+AGG | 0.678565 | 7.2:-2747356 | MS.gene024595:CDS |
| AATACCGGCAAACCCAACAA+AGG | 0.682222 | 7.2:+2746580 | None:intergenic |
| TTGTCTTCATGCCATAACAC+AGG | 0.691453 | 7.2:+2743738 | None:intergenic |
| AAGCCATCATACAATGAACA+GGG | 0.694969 | 7.2:-2743237 | MS.gene024595:CDS |
| GGGATATGCCTATGACTGCG+AGG | 0.696093 | 7.2:+2744056 | None:intergenic |
| CCCAAGATATGCCAGAACAG+GGG | 0.699164 | 7.2:-2742731 | MS.gene024595:CDS |
| TTGTCTACAACTGAGGCACG+TGG | 0.702248 | 7.2:+2747593 | None:intergenic |
| ACTAGATTGAATTACAACCC+GGG | 0.712162 | 7.2:-2750726 | MS.gene024595:CDS |
| GGCATGAAGACAATAGTAGG+CGG | 0.712215 | 7.2:-2743728 | MS.gene024595:CDS |
| ACGACGTCGACAATAGATCG+CGG | 0.715988 | 7.2:+2752469 | None:intergenic |
| GCCAACATTAGAGATACGTG+AGG | 0.729212 | 7.2:-2749805 | MS.gene024595:intron |
| TTTGATGGGAGAAGATACAA+CGG | 0.745786 | 7.2:+2744206 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 2742719 | 2752533 | 2742719 | ID=MS.gene024595 |
| chr7.2 | mRNA | 2742719 | 2752533 | 2742719 | ID=MS.gene024595.t1;Parent=MS.gene024595 |
| chr7.2 | exon | 2752324 | 2752533 | 2752324 | ID=MS.gene024595.t1.exon1;Parent=MS.gene024595.t1 |
| chr7.2 | CDS | 2752324 | 2752533 | 2752324 | ID=cds.MS.gene024595.t1;Parent=MS.gene024595.t1 |
| chr7.2 | exon | 2751535 | 2751637 | 2751535 | ID=MS.gene024595.t1.exon2;Parent=MS.gene024595.t1 |
| chr7.2 | CDS | 2751535 | 2751637 | 2751535 | ID=cds.MS.gene024595.t1;Parent=MS.gene024595.t1 |
| chr7.2 | exon | 2750985 | 2751061 | 2750985 | ID=MS.gene024595.t1.exon3;Parent=MS.gene024595.t1 |
| chr7.2 | CDS | 2750985 | 2751061 | 2750985 | ID=cds.MS.gene024595.t1;Parent=MS.gene024595.t1 |
| chr7.2 | exon | 2750710 | 2750901 | 2750710 | ID=MS.gene024595.t1.exon4;Parent=MS.gene024595.t1 |
| chr7.2 | CDS | 2750710 | 2750901 | 2750710 | ID=cds.MS.gene024595.t1;Parent=MS.gene024595.t1 |
| chr7.2 | exon | 2750458 | 2750577 | 2750458 | ID=MS.gene024595.t1.exon5;Parent=MS.gene024595.t1 |
| chr7.2 | CDS | 2750458 | 2750577 | 2750458 | ID=cds.MS.gene024595.t1;Parent=MS.gene024595.t1 |
| chr7.2 | exon | 2750296 | 2750358 | 2750296 | ID=MS.gene024595.t1.exon6;Parent=MS.gene024595.t1 |
| chr7.2 | CDS | 2750296 | 2750358 | 2750296 | ID=cds.MS.gene024595.t1;Parent=MS.gene024595.t1 |
| chr7.2 | exon | 2750068 | 2750211 | 2750068 | ID=MS.gene024595.t1.exon7;Parent=MS.gene024595.t1 |
| chr7.2 | CDS | 2750068 | 2750211 | 2750068 | ID=cds.MS.gene024595.t1;Parent=MS.gene024595.t1 |
| chr7.2 | exon | 2749806 | 2749970 | 2749806 | ID=MS.gene024595.t1.exon8;Parent=MS.gene024595.t1 |
| chr7.2 | CDS | 2749806 | 2749970 | 2749806 | ID=cds.MS.gene024595.t1;Parent=MS.gene024595.t1 |
| chr7.2 | exon | 2749522 | 2749599 | 2749522 | ID=MS.gene024595.t1.exon9;Parent=MS.gene024595.t1 |
| chr7.2 | CDS | 2749522 | 2749599 | 2749522 | ID=cds.MS.gene024595.t1;Parent=MS.gene024595.t1 |
| chr7.2 | exon | 2749246 | 2749332 | 2749246 | ID=MS.gene024595.t1.exon10;Parent=MS.gene024595.t1 |
| chr7.2 | CDS | 2749246 | 2749332 | 2749246 | ID=cds.MS.gene024595.t1;Parent=MS.gene024595.t1 |
| chr7.2 | exon | 2747592 | 2747672 | 2747592 | ID=MS.gene024595.t1.exon11;Parent=MS.gene024595.t1 |
| chr7.2 | CDS | 2747592 | 2747672 | 2747592 | ID=cds.MS.gene024595.t1;Parent=MS.gene024595.t1 |
| chr7.2 | exon | 2747293 | 2747388 | 2747293 | ID=MS.gene024595.t1.exon12;Parent=MS.gene024595.t1 |
| chr7.2 | CDS | 2747293 | 2747388 | 2747293 | ID=cds.MS.gene024595.t1;Parent=MS.gene024595.t1 |
| chr7.2 | exon | 2746552 | 2746622 | 2746552 | ID=MS.gene024595.t1.exon13;Parent=MS.gene024595.t1 |
| chr7.2 | CDS | 2746552 | 2746622 | 2746552 | ID=cds.MS.gene024595.t1;Parent=MS.gene024595.t1 |
| chr7.2 | exon | 2745197 | 2745325 | 2745197 | ID=MS.gene024595.t1.exon14;Parent=MS.gene024595.t1 |
| chr7.2 | CDS | 2745197 | 2745325 | 2745197 | ID=cds.MS.gene024595.t1;Parent=MS.gene024595.t1 |
| chr7.2 | exon | 2745043 | 2745119 | 2745043 | ID=MS.gene024595.t1.exon15;Parent=MS.gene024595.t1 |
| chr7.2 | CDS | 2745043 | 2745119 | 2745043 | ID=cds.MS.gene024595.t1;Parent=MS.gene024595.t1 |
| chr7.2 | exon | 2744920 | 2744960 | 2744920 | ID=MS.gene024595.t1.exon16;Parent=MS.gene024595.t1 |
| chr7.2 | CDS | 2744920 | 2744960 | 2744920 | ID=cds.MS.gene024595.t1;Parent=MS.gene024595.t1 |
| chr7.2 | exon | 2744722 | 2744796 | 2744722 | ID=MS.gene024595.t1.exon17;Parent=MS.gene024595.t1 |
| chr7.2 | CDS | 2744722 | 2744796 | 2744722 | ID=cds.MS.gene024595.t1;Parent=MS.gene024595.t1 |
| chr7.2 | exon | 2744371 | 2744522 | 2744371 | ID=MS.gene024595.t1.exon18;Parent=MS.gene024595.t1 |
| chr7.2 | CDS | 2744371 | 2744522 | 2744371 | ID=cds.MS.gene024595.t1;Parent=MS.gene024595.t1 |
| chr7.2 | exon | 2744174 | 2744278 | 2744174 | ID=MS.gene024595.t1.exon19;Parent=MS.gene024595.t1 |
| chr7.2 | CDS | 2744174 | 2744278 | 2744174 | ID=cds.MS.gene024595.t1;Parent=MS.gene024595.t1 |
| chr7.2 | exon | 2744022 | 2744097 | 2744022 | ID=MS.gene024595.t1.exon20;Parent=MS.gene024595.t1 |
| chr7.2 | CDS | 2744022 | 2744097 | 2744022 | ID=cds.MS.gene024595.t1;Parent=MS.gene024595.t1 |
| chr7.2 | exon | 2743711 | 2743790 | 2743711 | ID=MS.gene024595.t1.exon21;Parent=MS.gene024595.t1 |
| chr7.2 | CDS | 2743711 | 2743790 | 2743711 | ID=cds.MS.gene024595.t1;Parent=MS.gene024595.t1 |
| chr7.2 | exon | 2742719 | 2743376 | 2742719 | ID=MS.gene024595.t1.exon22;Parent=MS.gene024595.t1 |
| chr7.2 | CDS | 2742719 | 2743376 | 2742719 | ID=cds.MS.gene024595.t1;Parent=MS.gene024595.t1 |
| Gene Sequence |
| Protein sequence |
