AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene85722


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene85722.t1 MTR_4g051920 42.956 866 336 19 1 848 1 726 0.0 625
MS.gene85722.t1 MTR_7g114570 63.678 435 149 5 1 433 1 428 0.0 557
MS.gene85722.t1 MTR_7g114570 50.920 326 153 3 540 865 439 757 8.31e-100 340
MS.gene85722.t1 MTR_7g114570 63.678 435 149 5 1 433 1 428 0.0 557
MS.gene85722.t1 MTR_7g114570 50.000 326 145 4 540 865 439 746 2.35e-95 327
MS.gene85722.t1 MTR_1g067040 39.583 192 89 7 1043 1210 210 398 3.57e-27 116
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene85722.t1 AT1G75660 69.944 885 225 11 1 865 1 864 0.0 1189
MS.gene85722.t1 AT5G42540 59.661 885 312 14 1 865 1 860 0.0 1002
MS.gene85722.t1 AT5G42540 59.909 878 310 13 1 865 1 849 0.0 997
MS.gene85722.t1 AT1G54490 65.888 428 136 5 1 426 1 420 0.0 563
MS.gene85722.t1 AT1G54490 49.867 375 175 6 512 885 412 774 6.57e-102 345
MS.gene85722.t1 AT1G54490 66.760 358 110 4 71 426 12 362 1.09e-149 473
MS.gene85722.t1 AT1G54490 49.867 375 175 6 512 885 354 716 9.75e-103 347
MS.gene85722.t1 AT5G02820 39.583 192 89 7 1043 1210 220 408 3.48e-27 116

Find 331 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGGAGTTGGCTTAGGGTTT+TGG 0.145998 6.1:-16821347 None:intergenic
CCCGGAAAGTTTCTTCTCTT+TGG 0.162132 6.1:+16821414 MS.gene85722:CDS
TGCAATTCGTCAATCCATTT+TGG 0.163331 6.1:-16821952 None:intergenic
CCGGAAAGTTTCTTCTCTTT+GGG 0.173501 6.1:+16821415 MS.gene85722:CDS
TTATCATATTCAAGATTATT+AGG 0.184132 6.1:-16812010 None:intergenic
ACCCGACCGGGATCCGTTTC+TGG 0.192749 6.1:+16820947 MS.gene85722:CDS
GCCTAGGAAGCTTCTCTTTA+TGG 0.199961 6.1:+16812844 MS.gene85722:CDS
GTTTGTAGTTTCTGAATATT+TGG 0.223066 6.1:+16814579 MS.gene85722:intron
TCAGGAGAATTTGATGAAAA+AGG 0.233715 6.1:+16814443 MS.gene85722:CDS
AAACCATTTGATCAGCTTCT+TGG 0.239288 6.1:+16819115 MS.gene85722:CDS
TGCTCGACTCTGCTCAAATT+TGG 0.250358 6.1:-16815148 None:intergenic
CCCAAAGAGAAGAAACTTTC+CGG 0.254606 6.1:-16821415 None:intergenic
TCCCCAACTTGTTACGAAAA+TGG 0.264093 6.1:+16821570 MS.gene85722:CDS
AGGGAGTTGGAGGGAGTTGG+AGG 0.266497 6.1:-16821374 None:intergenic
TTCCTTGCAGTTTGCTTGTA+TGG 0.267969 6.1:+16821543 MS.gene85722:CDS
ATTGGATAAAAGTCAATAAT+TGG 0.272607 6.1:-16819298 None:intergenic
AAAGTTGCCGATTCCTCTTT+AGG 0.277058 6.1:-16813627 None:intergenic
ATTTCAAAACTCGTCCAAAA+TGG 0.281173 6.1:+16821938 MS.gene85722:CDS
ATTGAGTCGCTGTGCTTAAC+CGG 0.286683 6.1:+16822006 MS.gene85722:CDS
TTCCTTGGCTTTCAAATTGA+TGG 0.291893 6.1:-16821269 None:intergenic
AAGCTTCTCTTTATGGCTAT+TGG 0.293967 6.1:+16812851 MS.gene85722:CDS
TTGAAGATGTTGGCTTTCTA+TGG 0.295610 6.1:+16821784 MS.gene85722:CDS
ATTTCAAGTGGCTGGGGATT+AGG 0.301111 6.1:+16821821 MS.gene85722:CDS
AACCCTGTCCTCCCATCTTC+AGG 0.302826 6.1:+16820228 MS.gene85722:CDS
ATTCAGTAGCAACATGAGTA+TGG 0.305636 6.1:-16821627 None:intergenic
CTCCACAAGCCATCTGTAAA+TGG 0.308327 6.1:-16811891 None:intergenic
GAGTTGGAGGGAGTTGGAGG+GGG 0.309344 6.1:-16821371 None:intergenic
AATTGTGGCTATCGACGATT+TGG 0.312704 6.1:-16821198 None:intergenic
ATTATCATTTAATATATCTT+TGG 0.318352 6.1:-16821914 None:intergenic
TCATGCCATGGAACAGGTTC+AGG 0.320171 6.1:-16820761 None:intergenic
ACTATGAAGGTGTTTGTTCT+TGG 0.320479 6.1:+16818203 MS.gene85722:CDS
ATCTTCAGGTCCCCTATTGC+AGG 0.325511 6.1:+16820242 MS.gene85722:CDS
ATCTATTTCAAGACTATTCT+CGG 0.326915 6.1:-16816747 None:intergenic
CCAGATTGTTGAAATGAAAA+AGG 0.327358 6.1:-16816623 None:intergenic
TGATGAAGTGCGTCTTCTTC+AGG 0.329315 6.1:+16819569 MS.gene85722:CDS
GGAGTTGGAGGGAGTTGGAG+GGG 0.330109 6.1:-16821372 None:intergenic
AGACGCACTTCATCAATAAA+AGG 0.333488 6.1:-16819561 None:intergenic
TACAATACTATATTCATCTT+AGG 0.337529 6.1:+16813706 MS.gene85722:CDS
CTCTGAACGTGCTGATGTTA+AGG 0.342982 6.1:+16819881 MS.gene85722:CDS
TATCATATTCAAGATTATTA+GGG 0.344500 6.1:-16812009 None:intergenic
AGTTGGAGGGAGTTGGAGGG+GGG 0.349831 6.1:-16821370 None:intergenic
TCAATCTCAAAAGGAGGATT+AGG 0.351420 6.1:-16814638 None:intergenic
GGGAGGGAGTTGGAGGGAGT+TGG 0.360028 6.1:-16821377 None:intergenic
AGATAACTTAGAAACTTTAC+TGG 0.360113 6.1:-16816690 None:intergenic
TAAAGTTTCTAAGTTATCTT+CGG 0.362977 6.1:+16816694 MS.gene85722:CDS
CCGAGGAACTTGATGCTATA+CGG 0.366750 6.1:+16818045 MS.gene85722:CDS
ATGTCTTCCATGCCTGCAAT+AGG 0.371620 6.1:-16820254 None:intergenic
AGTATACAAGAAGGAACTTA+AGG 0.372016 6.1:+16814981 MS.gene85722:CDS
CACACCTGGAACTGAATTCA+TGG 0.374752 6.1:+16813665 MS.gene85722:CDS
GTTCCATGGCATGAAGCTAA+TGG 0.376554 6.1:+16820770 MS.gene85722:CDS
TTCTACAGACTATGACAATT+GGG 0.377262 6.1:+16820729 MS.gene85722:intron
TTTCTACAGACTATGACAAT+TGG 0.378411 6.1:+16820728 MS.gene85722:intron
GCATGTTTGATTACATTGAT+AGG 0.378445 6.1:+16812804 MS.gene85722:CDS
TACTCATGTTGCTACTGAAT+TGG 0.380619 6.1:+16821630 MS.gene85722:CDS
ATCCTTCAAGATTTCTTTGA+AGG 0.380883 6.1:-16813920 None:intergenic
TTGGGGTTGACGCCGGTGAA+TGG 0.382212 6.1:+16821475 MS.gene85722:CDS
ATTTCTTTGAAGGCGGATAT+AGG 0.382834 6.1:-16813910 None:intergenic
GGTGTAGGGCTTCGTGCCTT+TGG 0.384068 6.1:-16821170 None:intergenic
GTCCGCCTGCTTTCTTGATC+AGG 0.385261 6.1:+16821704 MS.gene85722:CDS
CTTAATATTAACTTTGAGTT+GGG 0.387432 6.1:+16819082 MS.gene85722:CDS
CAAATGCTTGTGTGGTCAAA+TGG 0.388119 6.1:+16814379 MS.gene85722:CDS
TTTCATCTTCGACGAGGCTT+TGG 0.389083 6.1:-16821035 None:intergenic
TTATTCTTTCCACCGTTAGC+TGG 0.389609 6.1:-16816490 None:intergenic
CCCCTTTGCGTCTGATCTGA+AGG 0.393708 6.1:+16819048 MS.gene85722:CDS
ACGACATTGCCTGTATAGTT+TGG 0.397375 6.1:+16813956 MS.gene85722:CDS
GGGCTTCGTGCCTTTGGCTA+AGG 0.397462 6.1:-16821164 None:intergenic
AAGAAAATTACCCTATCTTC+AGG 0.399804 6.1:-16812076 None:intergenic
TGATGCGCTCTTCATTCTCT+TGG 0.403238 6.1:+16821600 MS.gene85722:CDS
AAAGTTTCTAAGTTATCTTC+GGG 0.406060 6.1:+16816695 MS.gene85722:CDS
ATGCCCTGCCTGAGCCGTAT+AGG 0.407122 6.1:+16819251 MS.gene85722:CDS
CCTCTATCCGATGGGAGTTC+CGG 0.407615 6.1:+16811868 None:intergenic
CTGTGCACCAACCTTTCAAC+GGG 0.411150 6.1:-16819915 None:intergenic
CTGGAATAACGGAAGGGCTT+TGG 0.411423 6.1:-16821131 None:intergenic
CTTTGGCGGAGGATGACAAC+GGG 0.413665 6.1:-16821018 None:intergenic
CGCCTTCAAAGAAATCTTGA+AGG 0.414724 6.1:+16813918 MS.gene85722:CDS
TAAACCGCCTTGACCGTTGC+TGG 0.416833 6.1:-16812996 None:intergenic
TGTCTTCCATGCCTGCAATA+GGG 0.420068 6.1:-16820253 None:intergenic
TATTCAAGATTATTAGGGTT+GGG 0.420701 6.1:-16812004 None:intergenic
CTCAATATCCTTACTATCCA+TGG 0.424450 6.1:-16821887 None:intergenic
TTGGACTCTGAGGGAATGTC+TGG 0.425345 6.1:+16814598 MS.gene85722:CDS
ACCGGGATCCGTTTCTGGTC+GGG 0.425589 6.1:+16820952 MS.gene85722:CDS
AGCTGATCAAATGGTTTGAA+TGG 0.427200 6.1:-16819109 None:intergenic
TGTTTAACATGGTGCGGCCT+AGG 0.428483 6.1:+16812828 MS.gene85722:CDS
TGGGGTTGACGCCGGTGAAT+GGG 0.429345 6.1:+16821476 MS.gene85722:CDS
CATCTTCGACGAGGCTTTGG+CGG 0.429600 6.1:-16821032 None:intergenic
GGAATCGGGTTTGATTTCCT+TGG 0.429698 6.1:-16821284 None:intergenic
AATCTTATGCTCCCCTTCAC+CGG 0.435640 6.1:-16813883 None:intergenic
TCCTAGCTCCCGACCAGAAA+CGG 0.440545 6.1:-16820960 None:intergenic
GCAGCCATGAATTCAGTTCC+AGG 0.442610 6.1:-16813669 None:intergenic
TTCCATGGCATGAAGCTAAT+GGG 0.443751 6.1:+16820771 MS.gene85722:CDS
GGGAGTTGGAGGGAGTTGGA+GGG 0.446143 6.1:-16821373 None:intergenic
GGAAAGGCTAAAAGGAAGTC+AGG 0.447502 6.1:+16814425 MS.gene85722:CDS
TTAGCTTCATGCCATGGAAC+AGG 0.447514 6.1:-16820767 None:intergenic
GGACCTGAAGATGGGAGGAC+AGG 0.450117 6.1:-16820231 None:intergenic
ATGCCGATGATGTCGGAATC+GGG 0.452199 6.1:-16821298 None:intergenic
TCAGTCATAAGTTTCCTATA+CGG 0.456502 6.1:-16819265 None:intergenic
CAGATTAAATTGGGAGAACC+AGG 0.456576 6.1:+16817978 MS.gene85722:intron
TCTGATGTGTTCAACTCAAA+AGG 0.458187 6.1:+16817025 MS.gene85722:CDS
ACACCTCCTCAAAAGAGGTC+GGG 0.458509 6.1:-16812775 None:intergenic
TCCTGGTTGGAGTAACATAA+AGG 0.458871 6.1:+16813740 MS.gene85722:CDS
TCCTTGGCTTTCAAATTGAT+GGG 0.459718 6.1:-16821268 None:intergenic
CCAAAGAGAAGAAACTTTCC+GGG 0.460806 6.1:-16821414 None:intergenic
TTTCAGGTTGTATTTACTCC+TGG 0.462901 6.1:+16814350 MS.gene85722:intron
GCGTCTGATCTGAAGGGCCT+TGG 0.463297 6.1:+16819055 MS.gene85722:CDS
AAAACGAGCTCGAATGCAAC+AGG 0.463521 6.1:+16815213 MS.gene85722:CDS
GCTATATGTTCATGTGCATC+TGG 0.467409 6.1:-16820489 None:intergenic
TGGCAAACGCAATGCTTGGC+AGG 0.467550 6.1:+16819438 MS.gene85722:CDS
GATGCCGATGATGTCGGAAT+CGG 0.468837 6.1:-16821299 None:intergenic
TATCATCTCCATGGATAGTA+AGG 0.468988 6.1:+16821879 MS.gene85722:CDS
TGCAATAGGGGACCTGAAGA+TGG 0.469373 6.1:-16820240 None:intergenic
TGGCTAAGGGATACGTGAAC+TGG 0.469817 6.1:-16821150 None:intergenic
GTGTGGTCAAATGGGTCATA+TGG 0.470523 6.1:+16814388 MS.gene85722:CDS
ACTTCCTCCTAAAGAGGAAT+CGG 0.472690 6.1:+16813620 MS.gene85722:CDS
GTATCCAGCAAGGCTAAAAC+AGG 0.473082 6.1:-16821748 None:intergenic
CCCTTCAGATCAGACGCAAA+GGG 0.473297 6.1:-16819049 None:intergenic
ATCTTATGCTCCCCTTCACC+GGG 0.473784 6.1:-16813882 None:intergenic
ACGATTTGGGTGATGGTGTA+GGG 0.477739 6.1:-16821184 None:intergenic
GATGCAAATGTCCCCGGTGA+AGG 0.478688 6.1:+16813870 MS.gene85722:CDS
CATTTCAAATTCCCATTCAC+CGG 0.478981 6.1:-16821487 None:intergenic
CGGAAAGTTTCTTCTCTTTG+GGG 0.480785 6.1:+16821416 MS.gene85722:CDS
ACCAGAAACGGATCCCGGTC+GGG 0.481726 6.1:-16820948 None:intergenic
ACTCCAAGAAGCTGATCAAA+TGG 0.483604 6.1:-16819118 None:intergenic
TTGAGTCGCTGTGCTTAACC+GGG 0.486361 6.1:+16822007 MS.gene85722:CDS
TAATACCTCTCTTTCCAGCC+TGG 0.489333 6.1:-16817996 None:intergenic
CAAGAAGGAACTTAAGGGAA+TGG 0.493096 6.1:+16814987 MS.gene85722:CDS
TGATATGATTATGTTGGGTC+TGG 0.494234 6.1:+16814116 MS.gene85722:CDS
GACCGGGATCCGTTTCTGGT+CGG 0.494602 6.1:+16820951 MS.gene85722:CDS
TAACGGAAGGGCTTTGGCGG+AGG 0.495341 6.1:-16821125 None:intergenic
GTCTTCCATGCCTGCAATAG+GGG 0.496088 6.1:-16820252 None:intergenic
CCGTATAGCATCAAGTTCCT+CGG 0.496492 6.1:-16818045 None:intergenic
CATTCAAAATCAATCTCAAA+AGG 0.496803 6.1:-16814647 None:intergenic
CTCAAACACCTCCTCAAAAG+AGG 0.497276 6.1:-16812780 None:intergenic
CTTCGACGAGGCTTTGGCGG+AGG 0.498693 6.1:-16821029 None:intergenic
ATATTTGACAAGCGGTAGTA+AGG 0.498955 6.1:+16815014 MS.gene85722:CDS
GAAACTTTCCGGGTCGTAGT+GGG 0.499684 6.1:-16821404 None:intergenic
GAATAACGGAAGGGCTTTGG+CGG 0.500026 6.1:-16821128 None:intergenic
GCTTAATATTAACTTTGAGT+TGG 0.501013 6.1:+16819081 MS.gene85722:CDS
CGTATAGCATCAAGTTCCTC+GGG 0.501024 6.1:-16818044 None:intergenic
AAGTCAATAATTGGCGAGGT+TGG 0.503626 6.1:-16819289 None:intergenic
CATTGATAGGCTGTTTAACA+TGG 0.504607 6.1:+16812817 MS.gene85722:CDS
GACGATTTGGGTGATGGTGT+AGG 0.504753 6.1:-16821185 None:intergenic
GCCATAAAGAGAAGCTTCCT+AGG 0.505863 6.1:-16812845 None:intergenic
TGCAGGCATGGAAGACATCA+TGG 0.506225 6.1:+16820259 MS.gene85722:CDS
TCCGTTTCTGGTCGGGAGCT+AGG 0.507798 6.1:+16820959 MS.gene85722:CDS
ACTGTGAAGGAAAGGCTAAA+AGG 0.507871 6.1:+16814417 MS.gene85722:CDS
ATGCAAATGTCCCCGGTGAA+GGG 0.507900 6.1:+16813871 MS.gene85722:CDS
CACAAGCATTTGTCTTGACC+AGG 0.508385 6.1:-16814368 None:intergenic
GTTTCCTATACGGCTCAGGC+AGG 0.508491 6.1:-16819255 None:intergenic
TATCATTCATGTCGAGATAG+AGG 0.509841 6.1:-16812033 None:intergenic
CAAATTGATGGGGCAATCGA+GGG 0.510047 6.1:-16821257 None:intergenic
TTCAGTAGCAACATGAGTAT+GGG 0.510127 6.1:-16821626 None:intergenic
CACCTCCTCAAAAGAGGTCG+GGG 0.510452 6.1:-16812774 None:intergenic
AACTTTCCGGGTCGTAGTGG+GGG 0.510595 6.1:-16821402 None:intergenic
GGCTTCGTGCCTTTGGCTAA+GGG 0.510609 6.1:-16821163 None:intergenic
AGAAACTTTCCGGGTCGTAG+TGG 0.510766 6.1:-16821405 None:intergenic
TCCCGACCAGAAACGGATCC+CGG 0.510931 6.1:-16820953 None:intergenic
ATATTCAAGATTATTAGGGT+TGG 0.512954 6.1:-16812005 None:intergenic
TCGATGTTCCTTGAAGATGT+TGG 0.513126 6.1:+16821774 MS.gene85722:CDS
GGCCATTTACAGATGGCTTG+TGG 0.514518 6.1:+16811889 MS.gene85722:CDS
ATAGAAAGCCAACATCTTCA+AGG 0.514839 6.1:-16821782 None:intergenic
CTTAGGTTGAACAATGATCC+TGG 0.517293 6.1:+16813723 MS.gene85722:CDS
ACAGGGTTCTCCACTACATA+AGG 0.517478 6.1:-16820213 None:intergenic
CCCCATCAATTTGAAAGCCA+AGG 0.517673 6.1:+16821267 MS.gene85722:CDS
TTGGGTTTGCTAGTGTCTAT+CGG 0.517775 6.1:-16811986 None:intergenic
TTCTGAATATTTGGACTCTG+AGG 0.518941 6.1:+16814588 MS.gene85722:CDS
TCTCAAACCCTGACCTGGAA+AGG 0.519340 6.1:-16814488 None:intergenic
GGTTAAGCACAGCGACTCAA+TGG 0.519702 6.1:-16822004 None:intergenic
GATTCAAATGTCATCACACC+TGG 0.521016 6.1:+16813651 MS.gene85722:CDS
TTTCTCTTTGGGGTTGACGC+CGG 0.521511 6.1:+16821468 MS.gene85722:CDS
AAACTTTCCGGGTCGTGGGG+GGG 0.521714 6.1:-16821445 None:intergenic
GTATACAAGAAGGAACTTAA+GGG 0.522861 6.1:+16814982 MS.gene85722:CDS
ATTGTGGCTATCGACGATTT+GGG 0.523113 6.1:-16821197 None:intergenic
AAGAAGGAACTTAAGGGAAT+GGG 0.523737 6.1:+16814988 MS.gene85722:CDS
GAACTTGATTAACTTGCTGA+TGG 0.524094 6.1:+16814957 MS.gene85722:CDS
GGATGCTGATATGATTATGT+TGG 0.525019 6.1:+16814110 MS.gene85722:intron
ACATGCAGTGGTGGAATGAA+TGG 0.525756 6.1:+16820182 MS.gene85722:CDS
GACTTTGAAGTGGACATGAA+TGG 0.526515 6.1:+16819418 MS.gene85722:intron
CAGAAAACTTCCTCCTAAAG+AGG 0.527440 6.1:+16813614 MS.gene85722:CDS
TGATATATACCAAACTATAC+AGG 0.527590 6.1:-16813965 None:intergenic
TATAGATGGTGTTGCGCCAA+GGG 0.530218 6.1:+16812963 MS.gene85722:intron
ATACACCGAGGGTCTATGTT+GGG 0.530331 6.1:+16818168 MS.gene85722:CDS
TGATGCGGTCGAAGAAGAAC+CGG 0.530602 6.1:+16811934 MS.gene85722:CDS
AAGCAAGAGGAGATACTGTT+GGG 0.532154 6.1:+16816528 MS.gene85722:CDS
GCTATCGACGATTTGGGTGA+TGG 0.532555 6.1:-16821191 None:intergenic
CCCTTTGCGTCTGATCTGAA+GGG 0.533829 6.1:+16819049 MS.gene85722:CDS
TTAAATTGGGAGAACCAGGC+TGG 0.534080 6.1:+16817982 MS.gene85722:CDS
TCTGAATATTTGGACTCTGA+GGG 0.534393 6.1:+16814589 MS.gene85722:CDS
GACCTGAAGATGGGAGGACA+GGG 0.538748 6.1:-16820230 None:intergenic
CAGGTCCCCTATTGCAGGCA+TGG 0.538887 6.1:+16820247 MS.gene85722:CDS
AACACCTCCTCAAAAGAGGT+CGG 0.539477 6.1:-16812776 None:intergenic
ATAAGTTTCCTATACGGCTC+AGG 0.540135 6.1:-16819259 None:intergenic
TGAATGGCAAACGCAATGCT+TGG 0.541105 6.1:+16819434 MS.gene85722:CDS
AAATGCTTGTGTGGTCAAAT+GGG 0.541246 6.1:+16814380 MS.gene85722:CDS
TGTATCGTTGTCTCCGCGGA+GGG 0.541313 6.1:+16821682 MS.gene85722:CDS
CTGGAAAGAGAGGTATTATG+AGG 0.542231 6.1:+16818001 MS.gene85722:CDS
TCCATCCTGATCAAGAAAGC+AGG 0.543181 6.1:-16821709 None:intergenic
GCCTGCTTTCTTGATCAGGA+TGG 0.543490 6.1:+16821708 MS.gene85722:CDS
TACAGGCAATGTCGTGTACT+CGG 0.543688 6.1:-16813948 None:intergenic
CTTTCTGATGCAAATGTCCC+CGG 0.544804 6.1:+16813864 MS.gene85722:CDS
GATGCTGATATGATTATGTT+GGG 0.545172 6.1:+16814111 MS.gene85722:CDS
CTATCTTCAGGATGAAAACA+TGG 0.545336 6.1:-16812064 None:intergenic
GAGATGCTGAGCATGGACTT+TGG 0.546445 6.1:-16821227 None:intergenic
CTCCCATTAGCTTCATGCCA+TGG 0.547362 6.1:-16820773 None:intergenic
AACATCAGCACGTTCAGAGT+TGG 0.547653 6.1:-16819877 None:intergenic
AAAACTTTCCGGGTCGTGGG+GGG 0.548899 6.1:-16821446 None:intergenic
CGAGAGGAATTTGAGAGGGA+GGG 0.549293 6.1:+16813591 MS.gene85722:CDS
CGACTTGAAAATAAAGCTGA+AGG 0.551149 6.1:+16816985 MS.gene85722:CDS
GATAGGCTATTGAAGAATCA+AGG 0.551651 6.1:+16813565 MS.gene85722:intron
AAGGTGTTTGTTCTTGGCAA+TGG 0.552821 6.1:+16818209 MS.gene85722:CDS
TGTTGGCTTTCTATGGCCGT+AGG 0.554576 6.1:+16821791 MS.gene85722:CDS
GTGATGCATTATTACTATGA+AGG 0.554988 6.1:+16818190 MS.gene85722:CDS
TCAAATTGATGGGGCAATCG+AGG 0.555014 6.1:-16821258 None:intergenic
GGGAGGAGATACGACGAAAG+TGG 0.555361 6.1:+16820791 MS.gene85722:CDS
GTATAGATGGTGTTGCGCCA+AGG 0.557590 6.1:+16812962 MS.gene85722:intron
TCTACAGACTATGACAATTG+GGG 0.559139 6.1:+16820730 MS.gene85722:intron
GGCTGCAGACTGTGAAGGAA+AGG 0.559772 6.1:+16814409 MS.gene85722:CDS
GGTTGAACAATGATCCTGGT+TGG 0.559878 6.1:+16813727 MS.gene85722:CDS
CTATTTCAGGAAAACCCGAC+CGG 0.563405 6.1:+16820934 MS.gene85722:intron
ACCTTTATGTTACTCCAACC+AGG 0.564158 6.1:-16813741 None:intergenic
CTTCAAGATTTCTTTGAAGG+CGG 0.564485 6.1:-16813917 None:intergenic
CTAGTGTAGGCATGTGTGGT+AGG 0.564650 6.1:-16814718 None:intergenic
TTTGAGGATGCCGATGATGT+CGG 0.564801 6.1:-16821305 None:intergenic
GGATACGTGAACTGGAATAA+CGG 0.566030 6.1:-16821142 None:intergenic
GTTGCAGTTTCTAAATTCCA+CGG 0.566898 6.1:+16816575 MS.gene85722:CDS
GCAATAGGGGACCTGAAGAT+GGG 0.566930 6.1:-16820239 None:intergenic
AAACTTTCCGGGTCGTAGTG+GGG 0.566938 6.1:-16821403 None:intergenic
TAGCTGTCGTATCATCTCCA+TGG 0.567669 6.1:+16821870 MS.gene85722:CDS
AGAGACTCGGGTTGAACTTG+AGG 0.568442 6.1:-16816551 None:intergenic
CCTTCGATTTCGATGACGAC+CGG 0.570304 6.1:-16811953 None:intergenic
ACAAGCCATCTGTAAATGGC+CGG 0.571344 6.1:-16811887 None:intergenic
AAACCCGATTCCGACATCAT+CGG 0.572004 6.1:+16821295 MS.gene85722:CDS
GCCCTTCAGATCAGACGCAA+AGG 0.572072 6.1:-16819050 None:intergenic
CAAGCAAGAGGAGATACTGT+TGG 0.572683 6.1:+16816527 MS.gene85722:CDS
AACTTGATTAACTTGCTGAT+GGG 0.573034 6.1:+16814958 MS.gene85722:CDS
GAGTTCCGGCCATTTACAGA+TGG 0.574530 6.1:+16811882 MS.gene85722:CDS
AAATGAACCAGCAACGGTCA+AGG 0.575308 6.1:+16812989 MS.gene85722:CDS
TGCTCAGCTATAATATCCGT+TGG 0.575702 6.1:-16821844 None:intergenic
GCTGTGCACCAACCTTTCAA+CGG 0.578097 6.1:-16819916 None:intergenic
CCTTGGCTTTCAAATTGATG+GGG 0.578396 6.1:-16821267 None:intergenic
CGTCAGCAGTCACAAGCAAG+AGG 0.578680 6.1:+16816515 MS.gene85722:CDS
TTTGTTTGAGATGCTGAGCA+TGG 0.581507 6.1:-16821234 None:intergenic
TAAAACCTGAACCTGTTCCA+TGG 0.582052 6.1:+16820756 MS.gene85722:CDS
TGCAAATGTCCCCGGTGAAG+GGG 0.582121 6.1:+16813872 MS.gene85722:CDS
GACCAGAAACGGATCCCGGT+CGG 0.584858 6.1:-16820949 None:intergenic
AGAAACTGCAACTAGAGACT+CGG 0.585347 6.1:-16816564 None:intergenic
AATACACCGAGGGTCTATGT+TGG 0.589288 6.1:+16818167 MS.gene85722:CDS
GAAACTGCAACTAGAGACTC+GGG 0.589294 6.1:-16816563 None:intergenic
GATAACTTAGAAACTTTACT+GGG 0.589316 6.1:-16816689 None:intergenic
ACGAGAGGAATTTGAGAGGG+AGG 0.592042 6.1:+16813590 MS.gene85722:CDS
CTTCAGATCAGACGCAAAGG+GGG 0.592411 6.1:-16819047 None:intergenic
ATAGCAATAAACCTTGCAGC+AGG 0.593116 6.1:-16819145 None:intergenic
ACTTTCCGGGTCGTAGTGGG+GGG 0.595192 6.1:-16821401 None:intergenic
GTTACGAGAGGAATTTGAGA+GGG 0.595252 6.1:+16813587 MS.gene85722:CDS
TTTCCTATACGGCTCAGGCA+GGG 0.595415 6.1:-16819254 None:intergenic
AAGGAACTTAAGGGAATGGG+TGG 0.595705 6.1:+16814991 MS.gene85722:CDS
ACTTGAAAATAAAGCTGAAG+GGG 0.599690 6.1:+16816987 MS.gene85722:CDS
TTGTGCGTCAGACTTTGAAG+TGG 0.600082 6.1:+16819408 MS.gene85722:intron
CATCTTCAAGGAACATCGAT+CGG 0.600343 6.1:-16821770 None:intergenic
TTTAGGGATACATGCAGTGG+TGG 0.601340 6.1:+16820173 MS.gene85722:intron
GCTTTGGCGGAGGATGACAA+CGG 0.601501 6.1:-16821019 None:intergenic
ACGTGAACTGGAATAACGGA+AGG 0.601885 6.1:-16821138 None:intergenic
TTCTGGTCGGGAGCTAGGAG+AGG 0.601960 6.1:+16820964 MS.gene85722:CDS
GGACTTTGGAAGAGAAATTG+TGG 0.602408 6.1:-16821213 None:intergenic
GTGGCTGGGGATTAGGCCAA+CGG 0.608390 6.1:+16821828 MS.gene85722:CDS
GAAAGCAGGCGGACCCTCCG+CGG 0.610035 6.1:-16821695 None:intergenic
TTCACGTATCCCTTAGCCAA+AGG 0.611767 6.1:+16821154 MS.gene85722:CDS
ATAGGCTGTTTAACATGGTG+CGG 0.611977 6.1:+16812822 MS.gene85722:CDS
GACTTGAAAATAAAGCTGAA+GGG 0.612878 6.1:+16816986 MS.gene85722:CDS
GAGAACCAGGCTGGAAAGAG+AGG 0.613044 6.1:+16817991 MS.gene85722:CDS
TAAATGGCCGGAACTCCCAT+CGG 0.613139 6.1:-16811875 None:intergenic
TTCAGAAACTTAACTCCATG+TGG 0.614031 6.1:-16820519 None:intergenic
GGAGATACGACGAAAGTGGA+AGG 0.614103 6.1:+16820795 MS.gene85722:CDS
CAACTCAAAAGGTGGTCATG+AGG 0.614389 6.1:+16817036 MS.gene85722:CDS
TCAAAATCAATCTCAAAAGG+AGG 0.615231 6.1:-16814644 None:intergenic
TATTTCAGGAAAACCCGACC+GGG 0.615329 6.1:+16820935 MS.gene85722:intron
CATATAGCTCGACCACCACA+TGG 0.615763 6.1:+16820504 MS.gene85722:CDS
GGTTACATATCCTTATGTAG+TGG 0.616997 6.1:+16820203 MS.gene85722:CDS
ATAAAAGTCAATAATTGGCG+AGG 0.617724 6.1:-16819293 None:intergenic
GTACTAATGCACGCAGAGAG+AGG 0.618416 6.1:-16819828 None:intergenic
GGGCTAAAATGAACCAGCAA+CGG 0.623053 6.1:+16812983 MS.gene85722:CDS
AACCATACAAGCAAACTGCA+AGG 0.624740 6.1:-16821545 None:intergenic
ACATCGATCGGTATCCAGCA+AGG 0.624765 6.1:-16821758 None:intergenic
ACCTCATGAATCTCTAGTGT+AGG 0.625305 6.1:-16814731 None:intergenic
GTGTATCGTTGTCTCCGCGG+AGG 0.625580 6.1:+16821681 MS.gene85722:CDS
GGTTACGAGAGGAATTTGAG+AGG 0.625714 6.1:+16813586 MS.gene85722:CDS
AAAAGGTGGTCATGAGGACA+AGG 0.625945 6.1:+16817042 MS.gene85722:CDS
ATTTGAAATGTTATGATGAG+AGG 0.627525 6.1:+16821500 MS.gene85722:CDS
TCCGATGGTTATCGTTGATG+CGG 0.628437 6.1:+16811919 MS.gene85722:CDS
GTTGCCGATTCCTCTTTAGG+AGG 0.629901 6.1:-16813624 None:intergenic
ATCTCTAGTGTAGGCATGTG+TGG 0.629968 6.1:-16814722 None:intergenic
TAGGTGTATCGTTGTCTCCG+CGG 0.634090 6.1:+16821678 MS.gene85722:CDS
ACCGCATCAACGATAACCAT+CGG 0.637157 6.1:-16811920 None:intergenic
TTATTTAGGGATACATGCAG+TGG 0.637311 6.1:+16820170 MS.gene85722:intron
TGCTAAAGATGCATCTGATG+CGG 0.639455 6.1:+16813023 MS.gene85722:CDS
GCAATAAAGAAGTCTTTGAG+AGG 0.641433 6.1:+16816666 MS.gene85722:CDS
CCTTCAGATCAGACGCAAAG+GGG 0.642471 6.1:-16819048 None:intergenic
TCAGTAGCAACATGAGTATG+GGG 0.643252 6.1:-16821625 None:intergenic
CCGGTCGTCATCGAAATCGA+AGG 0.645716 6.1:+16811953 MS.gene85722:CDS
AAATGTTATGATGAGAGGTG+TGG 0.646252 6.1:+16821505 MS.gene85722:CDS
AATGTTATGATGAGAGGTGT+GGG 0.648542 6.1:+16821506 MS.gene85722:CDS
TTTATAGCTCCAGCTAACGG+TGG 0.648913 6.1:+16816481 MS.gene85722:intron
ATGGGTGGATATTTGACAAG+CGG 0.650927 6.1:+16815006 MS.gene85722:CDS
TGAAGAATCAAGGTTACGAG+AGG 0.653348 6.1:+16813575 MS.gene85722:CDS
CATCACCCAACATAGACCCT+CGG 0.653625 6.1:-16818173 None:intergenic
TAGGTCTTAAAATACACCGA+GGG 0.657251 6.1:+16818157 MS.gene85722:intron
ATCCTGATCAAGAAAGCAGG+CGG 0.660754 6.1:-16821706 None:intergenic
CATATGGCTGCAGACTGTGA+AGG 0.664189 6.1:+16814404 MS.gene85722:CDS
GGTCAAGACAAATGCTTGTG+TGG 0.667679 6.1:+16814371 MS.gene85722:CDS
CTGAATCAAGACGAGAACCG+TGG 0.670349 6.1:-16816592 None:intergenic
GATGTGTTCAACTCAAAAGG+TGG 0.676030 6.1:+16817028 MS.gene85722:CDS
GCTGATGGGAGTATACAAGA+AGG 0.677400 6.1:+16814972 MS.gene85722:CDS
ACGATACACCTAAAGCGTTG+AGG 0.682803 6.1:-16821667 None:intergenic
ATAGGGGACCTGAAGATGGG+AGG 0.687790 6.1:-16820236 None:intergenic
ACCTCCTCAAAAGAGGTCGG+GGG 0.689067 6.1:-16812773 None:intergenic
TGTGCGTTTCATCTTCGACG+AGG 0.694106 6.1:-16821041 None:intergenic
AGAAACTTAACTCCATGTGG+TGG 0.696063 6.1:-16820516 None:intergenic
CGTGAACTGGAATAACGGAA+GGG 0.697061 6.1:-16821137 None:intergenic
CATGGCATGAAGCTAATGGG+AGG 0.699584 6.1:+16820774 MS.gene85722:CDS
TGAACCAGCAACGGTCAAGG+CGG 0.706128 6.1:+16812992 MS.gene85722:CDS
GCTTGTGGAGAAATGTCCGA+TGG 0.709276 6.1:+16811904 MS.gene85722:CDS
TTTGGCGGAGGATGACGACG+AGG 0.709591 6.1:-16821113 None:intergenic
TTTGCGTTTCATCTTCAACG+AGG 0.710266 6.1:-16821089 None:intergenic
AGTTAATATTAAGCTCACCA+AGG 0.711240 6.1:-16819072 None:intergenic
TGAGTCGCTGTGCTTAACCG+GGG 0.712319 6.1:+16822008 MS.gene85722:CDS
TTTGGCGGAGGATGACAACG+GGG 0.715338 6.1:-16821017 None:intergenic
ATGTTATGATGAGAGGTGTG+GGG 0.718535 6.1:+16821507 MS.gene85722:CDS
TTTGCGTTTCATCTTCAACG+AGG 0.719849 6.1:-16821065 None:intergenic
GCCTACACTAGAGATTCATG+AGG 0.728007 6.1:+16814730 MS.gene85722:CDS
TTAGGTCTTAAAATACACCG+AGG 0.755633 6.1:+16818156 MS.gene85722:intron
TCTTATGCTCCCCTTCACCG+GGG 0.756098 6.1:-16813881 None:intergenic
TGTGCACCAACCTTTCAACG+GGG 0.809996 6.1:-16819914 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr6.1 gene 16811878 16822697 16811878 ID=MS.gene85722
chr6.1 mRNA 16811878 16822697 16811878 ID=MS.gene85722.t1;Parent=MS.gene85722
chr6.1 exon 16811878 16812087 16811878 ID=MS.gene85722.t1.exon1;Parent=MS.gene85722.t1
chr6.1 CDS 16811878 16812087 16811878 ID=cds.MS.gene85722.t1;Parent=MS.gene85722.t1
chr6.1 exon 16812770 16812872 16812770 ID=MS.gene85722.t1.exon2;Parent=MS.gene85722.t1
chr6.1 CDS 16812770 16812872 16812770 ID=cds.MS.gene85722.t1;Parent=MS.gene85722.t1
chr6.1 exon 16812968 16813044 16812968 ID=MS.gene85722.t1.exon3;Parent=MS.gene85722.t1
chr6.1 CDS 16812968 16813044 16812968 ID=cds.MS.gene85722.t1;Parent=MS.gene85722.t1
chr6.1 exon 16813570 16813761 16813570 ID=MS.gene85722.t1.exon4;Parent=MS.gene85722.t1
chr6.1 CDS 16813570 16813761 16813570 ID=cds.MS.gene85722.t1;Parent=MS.gene85722.t1
chr6.1 exon 16813858 16813977 16813858 ID=MS.gene85722.t1.exon5;Parent=MS.gene85722.t1
chr6.1 CDS 16813858 16813977 16813858 ID=cds.MS.gene85722.t1;Parent=MS.gene85722.t1
chr6.1 exon 16814111 16814173 16814111 ID=MS.gene85722.t1.exon6;Parent=MS.gene85722.t1
chr6.1 CDS 16814111 16814173 16814111 ID=cds.MS.gene85722.t1;Parent=MS.gene85722.t1
chr6.1 exon 16814356 16814496 16814356 ID=MS.gene85722.t1.exon7;Parent=MS.gene85722.t1
chr6.1 CDS 16814356 16814496 16814356 ID=cds.MS.gene85722.t1;Parent=MS.gene85722.t1
chr6.1 exon 16814587 16814751 16814587 ID=MS.gene85722.t1.exon8;Parent=MS.gene85722.t1
chr6.1 CDS 16814587 16814751 16814587 ID=cds.MS.gene85722.t1;Parent=MS.gene85722.t1
chr6.1 exon 16814949 16815035 16814949 ID=MS.gene85722.t1.exon9;Parent=MS.gene85722.t1
chr6.1 CDS 16814949 16815035 16814949 ID=cds.MS.gene85722.t1;Parent=MS.gene85722.t1
chr6.1 exon 16815148 16815234 16815148 ID=MS.gene85722.t1.exon10;Parent=MS.gene85722.t1
chr6.1 CDS 16815148 16815234 16815148 ID=cds.MS.gene85722.t1;Parent=MS.gene85722.t1
chr6.1 exon 16816488 16816769 16816488 ID=MS.gene85722.t1.exon11;Parent=MS.gene85722.t1
chr6.1 CDS 16816488 16816769 16816488 ID=cds.MS.gene85722.t1;Parent=MS.gene85722.t1
chr6.1 exon 16816968 16817063 16816968 ID=MS.gene85722.t1.exon12;Parent=MS.gene85722.t1
chr6.1 CDS 16816968 16817063 16816968 ID=cds.MS.gene85722.t1;Parent=MS.gene85722.t1
chr6.1 exon 16817981 16818076 16817981 ID=MS.gene85722.t1.exon13;Parent=MS.gene85722.t1
chr6.1 CDS 16817981 16818076 16817981 ID=cds.MS.gene85722.t1;Parent=MS.gene85722.t1
chr6.1 exon 16818160 16818230 16818160 ID=MS.gene85722.t1.exon14;Parent=MS.gene85722.t1
chr6.1 CDS 16818160 16818230 16818160 ID=cds.MS.gene85722.t1;Parent=MS.gene85722.t1
chr6.1 exon 16819027 16819155 16819027 ID=MS.gene85722.t1.exon15;Parent=MS.gene85722.t1
chr6.1 CDS 16819027 16819155 16819027 ID=cds.MS.gene85722.t1;Parent=MS.gene85722.t1
chr6.1 exon 16819246 16819322 16819246 ID=MS.gene85722.t1.exon16;Parent=MS.gene85722.t1
chr6.1 CDS 16819246 16819322 16819246 ID=cds.MS.gene85722.t1;Parent=MS.gene85722.t1
chr6.1 exon 16819419 16819459 16819419 ID=MS.gene85722.t1.exon17;Parent=MS.gene85722.t1
chr6.1 CDS 16819419 16819459 16819419 ID=cds.MS.gene85722.t1;Parent=MS.gene85722.t1
chr6.1 exon 16819546 16819620 16819546 ID=MS.gene85722.t1.exon18;Parent=MS.gene85722.t1
chr6.1 CDS 16819546 16819620 16819546 ID=cds.MS.gene85722.t1;Parent=MS.gene85722.t1
chr6.1 exon 16819768 16819925 16819768 ID=MS.gene85722.t1.exon19;Parent=MS.gene85722.t1
chr6.1 CDS 16819768 16819925 16819768 ID=cds.MS.gene85722.t1;Parent=MS.gene85722.t1
chr6.1 exon 16820178 16820294 16820178 ID=MS.gene85722.t1.exon20;Parent=MS.gene85722.t1
chr6.1 CDS 16820178 16820294 16820178 ID=cds.MS.gene85722.t1;Parent=MS.gene85722.t1
chr6.1 exon 16820470 16820545 16820470 ID=MS.gene85722.t1.exon21;Parent=MS.gene85722.t1
chr6.1 CDS 16820470 16820545 16820470 ID=cds.MS.gene85722.t1;Parent=MS.gene85722.t1
chr6.1 exon 16820737 16820816 16820737 ID=MS.gene85722.t1.exon22;Parent=MS.gene85722.t1
chr6.1 CDS 16820737 16820816 16820737 ID=cds.MS.gene85722.t1;Parent=MS.gene85722.t1
chr6.1 exon 16820943 16822029 16820943 ID=MS.gene85722.t1.exon23;Parent=MS.gene85722.t1
chr6.1 CDS 16820943 16822029 16820943 ID=cds.MS.gene85722.t1;Parent=MS.gene85722.t1
chr6.1 exon 16822689 16822697 16822689 ID=MS.gene85722.t1.exon24;Parent=MS.gene85722.t1
chr6.1 CDS 16822689 16822697 16822689 ID=cds.MS.gene85722.t1;Parent=MS.gene85722.t1
Gene Sequence

>MS.gene85722

ATGGGAGTTCCGGCCATTTACAGATGGCTTGTGGAGAAATGTCCGATGGTTATCGTTGATGCGGTCGAAGAAGAACCGGTCGTCATCGAAATCGAAGGCGTGCAGATTCCGATAGACACTAGCAAACCCAACCCTAATAATCTTGAATATGATAACCTCTATCTCGACATGAATGATATCATTCATCCATGTTTTCATCCTGAAGATAGGGTAATTTTCTTTTTTTTTTTTACTCTTTCACGTTATTATTATGAATTCATTTTTTATTTAATTATCATAATTGTTGTTGTTCGCTGTTATTATTATTGGATTCGAAGAAATGTGGATGCTTTTGAGTTATTTGGATTATTATTATTATTTTTGAATTAACCATCAATTTAATCCCTGAAGTATATATTAACATTCATTAATTTAGTCCCTGATATCTTAATAGCAATGACTGAATCGATGGATTTTATAAGAACGACTTATTATATACACATACATAGTTTAGGGACCAAGTGAACATCTTATTTGCAGCTTATAGCACAAGCACTATAAGCGCTTATGCATAAGCTAAGATAAGCTATTTTTATAGAAAAAACTGAAAAAGATAAAATGAAGGTAAATTGTTTTTGTCTATGCTATAAGCTGTTTCTATACACTGGTATTGAAGAACTTATGAATAGAAGCCAAAGAAAGCTTGTGAAAATAGCGAGAAGTTGTTTTAATAAGTTCTCCTAAATAGTCTCAAAACTCATGCCAGTAGATAAGCTCAAATAAGCCAATACAAACAGGCCCTAAATTGAAGTGAGTGTGATAGTTTAGGGACTAAATTGATGCTTTATTCTTATTCTTAATGTTGTTCTTGGATTTGGAGAAACGTGAATGATTTGGTGTTATTTGATTGCAGCCACCCCCGACCTCTTTTGAGGAGGTGTTTGAGTGCATGTTTGATTACATTGATAGGCTGTTTAACATGGTGCGGCCTAGGAAGCTTCTCTTTATGGCTATTGGTTTATCTTCTATCTTTGTTCTCTGGTTGTTTGTTTTCATGGTTTTTTTGGTTGTTGGTGACGCTTAATTGATTTTTCGGTTTTAAATTGTATAGATGGTGTTGCGCCAAGGGCTAAAATGAACCAGCAACGGTCAAGGCGGTTTAGAGCTGCTAAAGATGCATCTGATGCGGTATGTTGTAATGAGTTTTTTCATTCTTTTTGATTTTGTGATTTATTGGAGAATTTAATATTTCGTGTGTAGCGGTTTCAATTAACTATATATAGACCAATGCTGCACATTGGTCTGATTACTTATGAGTTTATTGAAATATACAAAACTCTGCTATTGGGTATTTTCCTGCTTCATTTTTATGTCGGTTTCATAGTCTTGATGTTATTGTTGTGTTAAATATAGGCCCTATAGTGTAGCGAAATTTTAACAAACTTCTATTGCTAAGAAAATATAGGCACTATAGTGTAGCAAATTTTTGACAAACTGCTATTGCTCAAAAAATATAGGCACTATAGTGTAGCGAAATTTTAACCAACTGCTATTACTCAGCAATAAGCGATTTAGTATCAAGTGTTGCCAAATAGTAGTTTTAGTGCTAAGTGATACATGTTCAACTTTAATCTCACTGGGAAAATAATGAAATATTTTGCTAAAGCGTAAGTTTGATTCACTTTTTTTGACTGTTGTTCTCTTGTGTGATAGGCTATTGAAGAATCAAGGTTACGAGAGGAATTTGAGAGGGAGGGCAGAAAACTTCCTCCTAAAGAGGAATCGGCAACTTTTGATTCAAATGTCATCACACCTGGAACTGAATTCATGGCTGCTCTGTCAATTGCACTACAATACTATATTCATCTTAGGTTGAACAATGATCCTGGTTGGAGTAACATAAAGGTAAAGTTCATTATAATGTTATCTAAATTTTGTATGGCTGCAGTATGTGTGTCTCAGTGGAGTGTATAATACTGTGATTTTTGTGTATATCTGAAGGTTATTCTTTCTGATGCAAATGTCCCCGGTGAAGGGGAGCATAAGATTATGTCCTATATCCGCCTTCAAAGAAATCTTGAAGGATTCAATCCGAGTACACGACATTGCCTGTATAGTTTGGTATATATCAATCTTCCAATATTTTGCTACTCTTGGAAAGCAACTTCTTCTTGATATTCACTCTATGTCTTCAATGCATTATCTATCTTGGACTTGATCAAACTGTTGATATCATTTTGTTGTTTTATGACAGGATGCTGATATGATTATGTTGGGTCTGGCTACCCATGAAGTCCATTTTTCAATTCTTAGAGAGGTTTGTGTACTAAAATTAGCTTCTGAGTCTCTGAATTAGTGCATTTCAGCATTGTAAAACAATTACACCATGTTAATTATTATTAAATAATGATTGTTATTGATGTATATGCAATATCATTAGCCATTTTCTGTCAGACTTTCCTAGGGATTAACACATTGGTCAATAATGGGTTATTTCAGGTTGTATTTACTCCTGGTCAAGACAAATGCTTGTGTGGTCAAATGGGTCATATGGCTGCAGACTGTGAAGGAAAGGCTAAAAGGAAGTCAGGAGAATTTGATGAAAAAGGAGATGCTATTGTTGCTAAAAAGCCTTTCCAGGTCAGGGTTTGAGATAAATTTTGAAATTCACAATGAAATAATGACGGGGCTTTGGGATTTACTTCTTACTTCTGCATGTTTCGTTTGTAGTTTCTGAATATTTGGACTCTGAGGGAATGTCTGGAGTATGAGATGAAAATACCTAATCCTCCTTTTGAGATTGATTTTGAATGCATATTGGATGATTTTATCTTCATTTGCTTTTTCGTTGGCAATGATTTCCTACCACACATGCCTACACTAGAGATTCATGAGGTAAGGGTTGTATTTTATTGGCAATAATTTGCGGATTGTCCTTAACGAGAGTACATAGTCTTCAAGTATACAGGAGTAGTTGTTTTTGATACTTAAGGAATTATGATACCGGTCTTTTATTATCTGAAATGCACATTTTTATGCCGGTAAGGTTATGCAACTGATACAATTTTTTGAACTTACATTATTTTTTATAGGGTGCGATGAACTTGATTAACTTGCTGATGGGAGTATACAAGAAGGAACTTAAGGGAATGGGTGGATATTTGACAAGCGGTAGTAAGGTACTTTCTTGATAGTAACAATGGTGATGATTGGCATATTTGTAGTATCTGTGTCGTTTCCATCTAAATCAAGCTTGTGTGTATAATGTTTCTTTTCCCCTTCTGTTCTCAGCCAAATTTGAGCAGAGTCGAGCATTTTATTCAGGCTGTTGGGTCATACGAAGATAGCATATTCCAAAAACGAGCTCGAATGCAACAGGTATGTTGATCTAGGATAACTATATCATTATATATTAGCCAGCAGTATGATTTGGTCGTTGGTCAAGAACTGTAAATATCATTTATTATGTATTAGTTATATGCAGGGGCGTAGCCCTTCATATGGGAGGGGTAGCCTTGGCTACCCCAAAAAAAATATTATTCTTGAATTAGTCGGTATGTATTTATATCCGGCTACCCCAAATAATAAATATTGAGCTACCCCAAACAAAATTAGTTGCAAAAGTTAGCATAAATAATAAAGTAAAAAAACTAATACAAAATTGATAGATTTATTTGTATTGGTTTGATACTTTCGGTCTCAATAACAACAATAGAGAAACCTTTTTCAACAATAAAAATTATCAAGACAATAGTCATAGACAAATTAAATGGACAATGAGTTTCTTGCAAATAACTTATTTATTTATATTTGAAAATACATTATTAATCTATTATTAAACAGGCAGTTGATGAAATTAGGTTCTTCAAATGCATTTTGCCCAACATTTTAAAATAGCGATTTTTATGTTAAGTTTCTAAGATTTGTTAATTTTAGTCCTTAATTTTTTGTTAGAGATTAAATTCAAGACTAAAAACACTTTTTTTTGTAAAATTTTAAAAAACTGAGAAAAAATTGAATAATTATTTTAAGGACTAAACCTAAAAAATTATAATTTATGGGACTAAAAATATATTTTATCCTTAAATTTAATACGTCTGTTTTCAAAAAATTCCTTCTTTATAGTTGGCCCCTGCATAAATTTTTCGCGAGCTTCGCCGCTGGTTATATGTTGTGGCTGATCTTGAAATAGTTGGAGGAAACAATGATGAGTATTCGGTATGCTGGCATAGCTGTCTTAATCTATGATTATGGGTGATTAGTTGTATATTTTTCATGCATTTTGTATTTTAACACTAATCATGGTTCATAATGGATTTGTTATTTTCTTTTACCTTCGTATCTAGTTGCATCTTTTCCCCAATGAAAACAAGGTAGAGAGAGATCACCAGTCTATGTCCAATATCTGTGCCGTATTTATGCTGTACCTTTGTGCTGGAAAATGGGTGCTAATTGCTTAATTTTTCTCACAATTTCTATCCATGTATTTTTGTATATGAACTGAAGGGAATGTGAGCGGTCAAAGAAAGTTCATATCTTGCCGTATAGTTTTTCATGTTCATAGCAATAGCTGTTTGACTGCTTGCTCTGAAGTGATTCCTCCTATGTGTTTTTACTTTTTTTTTTTATAGCTCCAGCTAACGGTGGAAAGAATAAAGCGTCAGCAGTCACAAGCAAGAGGAGATACTGTTGGGCCTCAAGTTCAACCCGAGTCTCTAGTTGCAGTTTCTAAATTCCACGGTTCTCGTCTTGATTCAGCTCCAACGCCTTTTTCATTTCAACAATCTGGGCCCACCTCAGTTAAAAAAGGCAATAAAGAAGTCTTTGAGAGGCCCAGTAAAGTTTCTAAGTTATCTTCGGGAGCAACTGTTGCTGCTTCAATTGTTGAAGCCGAGAATAGTCTTGAAATAGATGTATGTTATTCTACTTCAGGAGAGGCATTCTTTAGATAGAACTAATATATAAGCTAAGCTTTTACTGGATTATGAGTCTGGGAGAGTTAAAAAAACATTTTAATAGCTTGTTAAATAATTGTTTTTCTAAGAGTTCTACTTTGAGCTGGTGATTTCTATGTACTTCTTCTTGAAGTTTAGTATTCTTCTGCTCTACAGGTTGAAGATAACAAAGACGACTTGAAAATAAAGCTGAAGGGGATACTTCGTGACAAATCTGATGTGTTCAACTCAAAAGGTGGTCATGAGGACAAGGTAAAGCATAGAACACATATAATTGTGTCTGGAATTTTGAACTTCATTGATGGTCGAAGTAGGTATTTATTGAATAAATGGCATGTAAATTATCCTGCGTAAGGAAGGATATATATTAGGTGAAATTTTTCCCAAGTCCTATAAAAGAAAATTTAAAAAAATTCAAATGATTTGATTAAACATCTATTTTTTATACAATATATGTAATTTTCCCTGCAATATGGGCTGGGTTGATATTATTCCCCGCTTTTAATGTTTTCTGGTGAGTATTTGACCCTTCATTGTAGAAAAACATTTAATCAAAATCTTTAGAACTCAACCAAAGCTTTTGAAATTTATAGTTTACTGAGTGACAGATATGGGGGTTCTTTAGTTGCAAATAATTGCTTTTGAAGTTGAAGCATCAGCTTTGAAGGATTATCCATTTGTAACTATTATCAAATATTGATTAGACATGTATTTTGATTTTTCAATGACAAATCAATGTGGTCCTAGTTGTTTGTAGCAACGACAAGGCAAATTTCAAGTGGTTCAATCAACCTCTTGGCCACATAAGGGGCCTAGCCATTCCCATGATGGGAAAAGCTTACCAGATCAAACTTCCCCCCTCTGTGTGTATTGGGTGTGGGATATTGATGAATGCCTGATTTTAGTATATACAGGTGTTCGGCTACTGTGAGTTATGATTAACAACCTAGACCTTTCTCTGTCTTGGCCATATGCTACAAGCCTACACAATGACTGGGATTGCCGCCTTAATTTGCAATTGAAATATGCAACATAACATTTTAAAGTGTTTCTGGATTATGACATTAGCTCGATACTTTGAAAAGCATAATATGTCATAAATGTAATGATTTCCTATATCTCGATTATTGATTTTCGTTCATTGTAGTTAATAGTTTTTGTTTTAACAGATTAAATTGGGAGAACCAGGCTGGAAAGAGAGGTATTATGAGGAAAAATTTTCTGCTCAGACTCCCGAGGAACTTGATGCTATACGGAAAGATGTTGTAAGTTGGGAAATTGAAGTTTTATTAGTTTGGTTTTGATTCATGTGAAGATCTGGGTTTTCTTATTGTGATTTATTGTTTAGGTCTTAAAATACACCGAGGGTCTATGTTGGGTGATGCATTATTACTATGAAGGTGTTTGTTCTTGGCAATGGTAAGTTTCTTTTTCTAATTTTCTCTGGAATGTTGTATGAATCTTAAGTTGTGTTGGCTTTCCTTTTCTTTTTATATGGTACTTGTTGTACTTTCCACCTTCCTCACCATGATGAGAAACTGCGATAACCAAATTTTGTCTTTTGTTGGATAGAAATTTATTAGGTGATGAGTAGTGCATGCTCTTCCCCCAAAAAATAGTAGTGCGTGCTTTGAACATGTTCCTGACTTGTTTTACCATTGTTCTACTGATATTTCTTTGTAGATCCTGTGTGGTATATGATATTCTTAGTGGAATGTTGTGTGTCATACTCAAGCACAGACACCTTTGATCAAAAGCGTGTCCAGTGTCCGACACGACACCGACCCATGTCCGAAATAAAAAAGGCCAACACTTGGCTACAATTTCATGTTTGGTTAGTTCATAACTCTCTTAAGGAGGTTTCTTTAGTAATCAGAGTTGATTTAAGATCTGTCATGAAGAGGTTTGTTTAGTATAGGCTTCTCAATCATGTTTTGAACGACAACCCTGTTGAGATTGTGAATCTTCGGTTGTACCATTGATTGTCTCTTTTTCTTTGTCAAGGACGATTTGTTATCCTCCTTTCCCATTGCAAGTTATCATGGTTCCATTGAATTAATTCTTTTATGGGGAAAATGAGAGATAAGGAGTGTTTTTCCTTTATACTTTCATTGCCTTTGATATTTTATATTTTAGTGATCCATAGTGCATACACATTATTAGTGGCTTGCTGTTTGTTATTTTTCTTATTTTCTGATTCCTTGTTATGAAACAGGTTTTATCCTTATCATTATGCCCCCTTTGCGTCTGATCTGAAGGGCCTTGGTGAGCTTAATATTAACTTTGAGTTGGGTACTCCATTCAAACCATTTGATCAGCTTCTTGGAGTTTTACCTGCTGCAAGGTTTATTGCTATCCCATTTTTTCCGTTAAAGTTGTAACTTAAAACTAAACTTGAAGTTTCTGTAACGTTGAAAATATGATTTATCTGCAGCTCTCATGCCCTGCCTGAGCCGTATAGGAAACTTATGACTGATCCAACCTCGCCAATTATTGACTTTTATCCAATAGGTATGTCTATAATACAGTGTACACTGAATAAGTTTTAGAAGTTTCATTGAATTATCGTTATCGCTCCTTTATGTAATATTTGATGTTGTGCGTCAGACTTTGAAGTGGACATGAATGGCAAACGCAATGCTTGGCAGGTTCGCCTCCTCGTTACATCTGCTCTTATCTGTGTGTTTTCCAACATGACAGCAACATTGTTTGTAATAAAATCCTTCCTTTTTAGGGTATTGCGAAGTTGCCTTTTATTGATGAAGTGCGTCTTCTTCAGGAAGTTCAGAAAGTAGAAAACTTGTTAACAGTAAGCTCATTCCTTCATTAAGTTTTATCAACACTTGTTCACTTCAGTTCATTGTTCTCAATTCCTTCCCCTCCTGTTCACACCCCCCTTATCATAGACTGATTTAGTTATATTTTGTTTTCCTATGTCTATTCAAAAAATTAATAGCCAGAGGAAAAGCGACGAAATGCAATAATGTTTGAGATGCTTTTTGTGAATTCATGTCATCCTCTCTCTGCGTGCATTAGTACACTCGACAACAAATGTAGAAACATGTCCAACTCTGAACGTGCTGATGTTAAGGAAAAAATAGACCCCGTTGAAAGGTTGGTGCACAGCTTTTTTATTTTTTGAACTTGCTTTTTGGATGAGAAAGATTTAAATTAATATGCTTATAATCATAATGGCGAGGTAAAAAAAAAAAAACAATTGTTTTGAAACTTATGAATTATGATGGTGTATTGTTTTTCTTCAAACCAAGGACAAAGCAAAAGGACAAGTTGTATGCATCACATTATTTTGTTTGCATCATATGTTCGATTTAAGATCTTGCTCGACTACTTTCTGATGTTATTTAGGGATACATGCAGTGGTGGAATGAATGGTTACATATCCTTATGTAGTGGAGAACCCTGTCCTCCCATCTTCAGGTCCCCTATTGCAGGCATGGAAGACATCATGGATAATCATGTCATGTAAGTTTGCCAATGATGAGTATATAATAAAAGCATTATTTATGATCACAGATCTGACGAGGAATCCTAGCAGAACTTTTCTGCACACACCCTTTACGTTTGCTTCATTTTTTTTTTTTTTTTGAAATAACACTAAAGTGATGTTATGTTTCTTATTTGCTGCATTGGTGCTCAGATGTGCAATATATAGACTTCCAGATGCACATGAACATATAGCTCGACCACCACATGGAGTTAAGTTTCTGAAGAATGTATTAAATTTTCTACCTGCTGCTTATTAATAGTGCTCTAACTTCCTCTCTTCTCGGGTTCATTGCTTAATTCCAGTGGTTTAATTAGCAAGACCATACTGTGTTCTACCTAGAATGTTATAGTGTTTCATCTGTTCATATACTGTCAATATTGCTGAAAAAATAAATAAATTCATGCTCCTTTTCTACAGACTATGACAATTGGGGATCTAAAACCTGAACCTGTTCCATGGCATGAAGCTAATGGGAGGAGATACGACGAAAGTGGAAGGTAGGACTTTCGTTTATTTGTGCTAAAAGACTTGAAGTTAAATTTGTTATTTACCATTGAACAGCATGGAGTATCTTGTCATCCTGCTGATCAAAATTGTTAATGGGGCTCGGTTTTCTATTTCAGGAAAACCCGACCGGGATCCGTTTCTGGTCGGGAGCTAGGAGAGGCAGCACACAGCTCGAAGATGAAACGCAGAGCCCCGTTGTCATCCTCCGCCAAAGCCTCGTCGAAGATGAAACGCACAGCCTCGTTGAAGATGAAACGCAAAGCCTCGTTGAAGATGAAACGCAAAGCCTCGTCGTCATCCTCCGCCAAAGCCCTTCCGTTATTCCAGTTCACGTATCCCTTAGCCAAAGGCACGAAGCCCTACACCATCACCCAAATCGTCGATAGCCACAATTTCTCTTCCAAAGTCCATGCTCAGCATCTCAAACAAACCCTCGATTGCCCCATCAATTTGAAAGCCAAGGAAATCAAACCCGATTCCGACATCATCGGCATCCTCAAAAGCTCCAAAACCCTAAAGTCCAAAACCCTAAGCCAACTCCCTCCCCCCTCCAACTCCCTCCAACTCCCTCCCTCCCCCCACTACGACCCGGAAAGTTTCTTCTCTTTGGGGTTGACGCCCCCCCACGACCCGGAAAGTTTTTTCTCTTTGGGGTTGACGCCGGTGAATGGGAATTTGAAATGTTATGATGAGAGGTGTGGGGCTGTGATAGATTGTTCCTTGCAGTTTGCTTGTATGGTTATTCCCCAACTTGTTACGAAAATGGTCGCTGATGATGCGCTCTTCATTCTCTTGGTGCCCCATACTCATGTTGCTACTGAATTGGCTCGCTATTGTTTTCCTCAACGCTTTAGGTGTATCGTTGTCTCCGCGGAGGGTCCGCCTGCTTTCTTGATCAGGATGGAGAAGAAATTGAAATTGCCTGTTTTAGCCTTGCTGGATACCGATCGATGTTCCTTGAAGATGTTGGCTTTCTATGGCCGTAGGTTGAAAAATTTCAAGTGGCTGGGGATTAGGCCAACGGATATTATAGCTGAGCATAATAGCTGTCGTATCATCTCCATGGATAGTAAGGATATTGAGACTGCCAAAGATATATTAAATGATAATTATTTCAAAACTCGTCCAAAATGGATTGACGAATTGCATATTATGCTCAAGAATAAGCAAAAGATTGCCATTGAGTCGCTGTGCTTAACCGGGGTAAGATCGTACTTGACAACTGTGTTTTTGCCAATGAAACTGCAGCTTGAAGATTGGATTTGAAGCTAAGCTGGAAGAAGCAAGGATTAGAGAAGAAAATCTGAACAGAAGCAATGAAGCTTTCAAAGAGGAAATGAAGCAGCAAGCAGAGGCTACAAACAAGATGCTAAAAGAGATGATGGAGATGTTCCAAAACCAAGCCAAGCTTTAGTTGCACACCATTATTTATAGCTTGTTTAGGTTTTACTCTTTTAAGTTTCTGTGTTTTTCTGCTTCTGAACTTTTTTTTTTTGTGCTTCTGATCTAATGTTATGCTTCTGAACAGTTTATGCGTTACTGAACTAGTACTTTGCTCTGAACTTTAAACTATTTTTTTTTTTTTTTTGAATTTCTCACTGTTTTTCTCATCTCTTTCTTTTTGTCTTTATTTTATACTTTTTGTTGATGACAAAAGGGGGAGTGGATGTATAGGGATTAAGGGTAAACCAAAACGTAGGAGAAAGTAAATTACCACATCAGCAAGACAATGACCACACATTGTTAGCACTTTCAAATCTTCGGTTTTAATCTATAAATGATAATAATAACACAATCGTGTAGACTATATCAACTTTATATGTTTTGTTGTCAATTTAATATCTAATCTTTTATGCTTAAAGGTAACTTGA

Protein sequence

>MS.gene85722.t1

MGVPAIYRWLVEKCPMVIVDAVEEEPVVIEIEGVQIPIDTSKPNPNNLEYDNLYLDMNDIIHPCFHPEDRPPPTSFEEVFECMFDYIDRLFNMVRPRKLLFMAIDGVAPRAKMNQQRSRRFRAAKDASDAAIEESRLREEFEREGRKLPPKEESATFDSNVITPGTEFMAALSIALQYYIHLRLNNDPGWSNIKVILSDANVPGEGEHKIMSYIRLQRNLEGFNPSTRHCLYSLDADMIMLGLATHEVHFSILREVVFTPGQDKCLCGQMGHMAADCEGKAKRKSGEFDEKGDAIVAKKPFQFLNIWTLRECLEYEMKIPNPPFEIDFECILDDFIFICFFVGNDFLPHMPTLEIHEGAMNLINLLMGVYKKELKGMGGYLTSGSKPNLSRVEHFIQAVGSYEDSIFQKRARMQQLQLTVERIKRQQSQARGDTVGPQVQPESLVAVSKFHGSRLDSAPTPFSFQQSGPTSVKKGNKEVFERPSKVSKLSSGATVAASIVEAENSLEIDVEDNKDDLKIKLKGILRDKSDVFNSKGGHEDKIKLGEPGWKERYYEEKFSAQTPEELDAIRKDVVLKYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKGLGELNINFELGTPFKPFDQLLGVLPAASSHALPEPYRKLMTDPTSPIIDFYPIDFEVDMNGKRNAWQGIAKLPFIDEVRLLQEVQKVENLLTPEEKRRNAIMFEMLFVNSCHPLSACISTLDNKCRNMSNSERADVKEKIDPVERDTCSGGMNGYISLCSGEPCPPIFRSPIAGMEDIMDNHVICAIYRLPDAHEHIARPPHGVKFLKNTMTIGDLKPEPVPWHEANGRRYDESGRKTRPGSVSGRELGEAAHSSKMKRRAPLSSSAKASSKMKRTASLKMKRKASLKMKRKASSSSSAKALPLFQFTYPLAKGTKPYTITQIVDSHNFSSKVHAQHLKQTLDCPINLKAKEIKPDSDIIGILKSSKTLKSKTLSQLPPPSNSLQLPPSPHYDPESFFSLGLTPPHDPESFFSLGLTPVNGNLKCYDERCGAVIDCSLQFACMVIPQLVTKMVADDALFILLVPHTHVATELARYCFPQRFRCIVVSAEGPPAFLIRMEKKLKLPVLALLDTDRCSLKMLAFYGRRLKNFKWLGIRPTDIIAEHNSCRIISMDSKDIETAKDILNDNYFKTRPKWIDELHIMLKNKQKIAIESLCLTGVT