Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57277.t1 | XP_024637520.1 | 94.1 | 928 | 47 | 2 | 1 | 920 | 1 | 928 | 0.00E+00 | 1748 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57277.t1 | Q9FQ03 | 68.7 | 887 | 244 | 8 | 1 | 859 | 1 | 881 | 0.0e+00 | 1202.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57277.t1 | A0A396I803 | 94.1 | 928 | 47 | 2 | 1 | 920 | 1 | 928 | 0.0e+00 | 1748.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene050503 | MS.gene57277 | PPI |
MS.gene57277 | MS.gene005159 | PPI |
MS.gene69915 | MS.gene57277 | PPI |
MS.gene93636 | MS.gene57277 | PPI |
MS.gene57277 | MS.gene44029 | PPI |
MS.gene57277 | MS.gene75866 | PPI |
MS.gene44813 | MS.gene57277 | PPI |
MS.gene57277 | MS.gene026063 | PPI |
MS.gene57277 | MS.gene062648 | PPI |
MS.gene83265 | MS.gene57277 | PPI |
MS.gene70800 | MS.gene57277 | PPI |
MS.gene069519 | MS.gene57277 | PPI |
MS.gene43700 | MS.gene57277 | PPI |
MS.gene57277 | MS.gene042800 | PPI |
MS.gene57277 | MS.gene033864 | PPI |
MS.gene024595 | MS.gene57277 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57277.t1 | MTR_4g051920 | 43.560 | 854 | 329 | 17 | 1 | 832 | 1 | 723 | 0.0 | 644 |
MS.gene57277.t1 | MTR_7g114570 | 64.569 | 429 | 147 | 4 | 1 | 425 | 1 | 428 | 0.0 | 560 |
MS.gene57277.t1 | MTR_7g114570 | 43.326 | 427 | 193 | 8 | 508 | 909 | 407 | 809 | 1.47e-95 | 322 |
MS.gene57277.t1 | MTR_7g114570 | 64.569 | 429 | 147 | 4 | 1 | 425 | 1 | 428 | 0.0 | 560 |
MS.gene57277.t1 | MTR_7g114570 | 46.329 | 395 | 188 | 6 | 526 | 909 | 439 | 820 | 6.63e-100 | 334 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57277.t1 | AT1G75660 | 66.172 | 943 | 267 | 12 | 1 | 901 | 1 | 933 | 0.0 | 1170 |
MS.gene57277.t1 | AT5G42540 | 58.877 | 873 | 326 | 10 | 1 | 852 | 1 | 861 | 0.0 | 993 |
MS.gene57277.t1 | AT5G42540 | 58.145 | 884 | 326 | 11 | 1 | 852 | 1 | 872 | 0.0 | 986 |
MS.gene57277.t1 | AT1G54490 | 64.789 | 426 | 142 | 5 | 1 | 421 | 1 | 423 | 0.0 | 563 |
MS.gene57277.t1 | AT1G54490 | 49.127 | 401 | 172 | 8 | 499 | 890 | 413 | 790 | 9.20e-105 | 347 |
MS.gene57277.t1 | AT1G54490 | 66.292 | 356 | 115 | 3 | 69 | 421 | 12 | 365 | 3.24e-155 | 479 |
MS.gene57277.t1 | AT1G54490 | 49.127 | 401 | 172 | 8 | 499 | 890 | 355 | 732 | 1.06e-105 | 348 |
Find 216 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTCTGAAGGTTATTCTTTC+TGG | 0.075511 | 7.2:+46038896 | MS.gene57277:intron |
GCCTAGGAAGCTTCTCTTTA+TGG | 0.106979 | 7.2:+46037443 | MS.gene57277:CDS |
CAAGAACGAATTTACGAAAT+TGG | 0.130450 | 7.2:+46045729 | MS.gene57277:CDS |
CGCCTTCAAAGAAATCTTAA+AGG | 0.213505 | 7.2:+46038965 | MS.gene57277:CDS |
AAACCATTTGACCAGCTTAT+TGG | 0.226422 | 7.2:+46047329 | MS.gene57277:CDS |
AGAAACCGAGTAAAGTTTCT+AGG | 0.232493 | 7.2:+46046308 | MS.gene57277:CDS |
CCTATCAATGTAAGCAAATA+TGG | 0.261224 | 7.2:-46037403 | None:intergenic |
ATTAGGAGCCAACCTTTCTA+TGG | 0.265523 | 7.2:-46047990 | None:intergenic |
AACCTTGCCCTCCTTTCTTC+AGG | 0.268651 | 7.2:+46048205 | MS.gene57277:CDS |
CCATATTTGCTTACATTGAT+AGG | 0.269727 | 7.2:+46037403 | MS.gene57277:CDS |
TTCTTCAGGTCACCTGTTGC+AGG | 0.273990 | 7.2:+46048219 | MS.gene57277:CDS |
AAGCTTCTCTTTATGGCTAT+TGG | 0.293967 | 7.2:+46037450 | MS.gene57277:CDS |
TTCAATACTATATTCATCTT+AGG | 0.296093 | 7.2:+46038736 | MS.gene57277:CDS |
CGTATAGCATCAAGTTCTTC+AGG | 0.301139 | 7.2:-46046984 | None:intergenic |
CCTTCCCCATTTCAACAATC+TGG | 0.301405 | 7.2:+46046265 | MS.gene57277:CDS |
TATGCTTGTATTATAGATAT+TGG | 0.302142 | 7.2:-46047510 | None:intergenic |
CGTTGCTAAATTGCCTTTCC+AGG | 0.307663 | 7.2:+46045272 | MS.gene57277:CDS |
CTTTCTGGTGCAAATGTTCC+TGG | 0.309325 | 7.2:+46038911 | MS.gene57277:CDS |
ATTATGAAGGTGTTTGTTCT+TGG | 0.311594 | 7.2:+46047136 | MS.gene57277:CDS |
TTTATTTAACAGATTAAGTT+AGG | 0.313166 | 7.2:+46046909 | MS.gene57277:intron |
CAATTCCTTGCATGTCAATA+TGG | 0.313337 | 7.2:+46048725 | MS.gene57277:CDS |
AACAACGGTCTAGGCGGTTT+AGG | 0.313363 | 7.2:+46038466 | MS.gene57277:CDS |
TTATCGTATTCGTTGTTGTT+AGG | 0.316574 | 7.2:-46037200 | None:intergenic |
AAAATCTGTGACTCTTGTTT+AGG | 0.325402 | 7.2:-46038657 | None:intergenic |
ATCCTTTAAGATTTCTTTGA+AGG | 0.337012 | 7.2:-46038967 | None:intergenic |
TTGGACTCTGAGGGAATATC+TGG | 0.346265 | 7.2:+46045395 | MS.gene57277:CDS |
CTGAAGAACTTGATGCTATA+CGG | 0.347811 | 7.2:+46046985 | MS.gene57277:CDS |
AGTCGCGTTTCATCAATAAA+AGG | 0.360742 | 7.2:-46047676 | None:intergenic |
TACAGGCAATGCCGTGTATT+GGG | 0.361824 | 7.2:-46038995 | None:intergenic |
GAAATTGCAGCTAGAGATTC+CGG | 0.367281 | 7.2:-46046205 | None:intergenic |
AGGAAGATGGGTGATGAAAA+AGG | 0.368047 | 7.2:+46045240 | MS.gene57277:CDS |
ACAACGGTCTAGGCGGTTTA+GGG | 0.368344 | 7.2:+46038467 | MS.gene57277:CDS |
TTTCTCAGCCAAACCTGAGC+AGG | 0.368909 | 7.2:+46045872 | MS.gene57277:intron |
TTATTCTTGTCGGCAGCTTA+AGG | 0.374944 | 7.2:+46048680 | MS.gene57277:CDS |
TCATGCCACATAACAGGTTC+GGG | 0.376497 | 7.2:-46048627 | None:intergenic |
TTATGCCCAGATTGTTGAAA+TGG | 0.379800 | 7.2:-46046271 | None:intergenic |
TGGAAAACGCTTTGCTTGGC+AGG | 0.381177 | 7.2:+46047639 | MS.gene57277:CDS |
CTTGCTTCCACCCTGAGAAT+AGG | 0.386761 | 7.2:+46037255 | MS.gene57277:CDS |
AATACACGGCATTGCCTGTA+TGG | 0.389006 | 7.2:+46038998 | MS.gene57277:CDS |
CACACCTGGAACTGAATTCA+TGG | 0.395638 | 7.2:+46038695 | MS.gene57277:CDS |
TTGCAGGTTGTGTTTACTCC+TGG | 0.396039 | 7.2:+46045150 | MS.gene57277:intron |
TTGCTTCCACCCTGAGAATA+GGG | 0.397134 | 7.2:+46037256 | MS.gene57277:CDS |
TTCATGCCACATAACAGGTT+CGG | 0.398215 | 7.2:-46048628 | None:intergenic |
ATGCTCTTCCTGAGCCGTAT+AGG | 0.402837 | 7.2:+46047463 | MS.gene57277:CDS |
AAAGTTTCTAGGTTATCTTC+AGG | 0.405965 | 7.2:+46046319 | MS.gene57277:CDS |
TATCGTATTCGTTGTTGTTA+GGG | 0.407854 | 7.2:-46037199 | None:intergenic |
AAGAACGAATTTACGAAATT+GGG | 0.408587 | 7.2:+46045730 | MS.gene57277:CDS |
CTGCTGAAGAATCAAGGTTA+AGG | 0.409420 | 7.2:+46038601 | MS.gene57277:CDS |
AGGCATTGTTGATCCATTCA+TGG | 0.416212 | 7.2:-46048769 | None:intergenic |
GAATCTTCATGCCACATAAC+AGG | 0.418055 | 7.2:-46048633 | None:intergenic |
TTCTGGTAGGAGAAAACCTT+CGG | 0.418676 | 7.2:+46048653 | MS.gene57277:CDS |
TGCTCCACCCTGCTCAGGTT+TGG | 0.419995 | 7.2:-46045880 | None:intergenic |
TGTTGGTTCATCTTAGCCCT+TGG | 0.420470 | 7.2:-46038447 | None:intergenic |
AACTGTGGACAAGTTGATAA+AGG | 0.424904 | 7.2:-46048897 | None:intergenic |
TATGCCCAGATTGTTGAAAT+GGG | 0.430480 | 7.2:-46046270 | None:intergenic |
TGATCGATTGGTGCGGCATA+AGG | 0.431699 | 7.2:-46048789 | None:intergenic |
ATTATAGATATTGGCGAGCT+TGG | 0.432225 | 7.2:-46047501 | None:intergenic |
ACAGCCATGAATTCAGTTCC+AGG | 0.433026 | 7.2:-46038699 | None:intergenic |
ATAGGCTGTTTGTCATAGTC+AGG | 0.441548 | 7.2:+46037421 | MS.gene57277:CDS |
GATGCTGATTTGATCATGTT+GGG | 0.442405 | 7.2:+46039115 | MS.gene57277:CDS |
TTAATATGTTCATGCGCATC+AGG | 0.447233 | 7.2:-46048383 | None:intergenic |
ATACAGGCAATGCCGTGTAT+TGG | 0.447452 | 7.2:-46038996 | None:intergenic |
TAAACCGCCTAGACCGTTGT+TGG | 0.448868 | 7.2:-46038464 | None:intergenic |
TGATTTGATCATGTTGGGTC+TGG | 0.449824 | 7.2:+46039120 | MS.gene57277:CDS |
GTTATGTGGCATGAAGATTC+TGG | 0.450622 | 7.2:+46048636 | MS.gene57277:CDS |
GTGAGAAATCTGTAGAAAGC+TGG | 0.453607 | 7.2:-46037083 | None:intergenic |
TTGGGTGGTTATTTGACAAA+TGG | 0.456634 | 7.2:+46045748 | MS.gene57277:CDS |
TGTGCAGACTGTGGCGATAG+AGG | 0.463138 | 7.2:+46048596 | MS.gene57277:intron |
TGCTGAAGAATCAAGGTTAA+GGG | 0.465504 | 7.2:+46038602 | MS.gene57277:CDS |
TCTGATGTATTCAACTCAAA+AGG | 0.467057 | 7.2:+46046572 | MS.gene57277:CDS |
ACGGCATTGCCTGTATGGTT+TGG | 0.467725 | 7.2:+46039003 | MS.gene57277:CDS |
ATCTTATGCTCCCCTTCGCC+AGG | 0.469492 | 7.2:-46038929 | None:intergenic |
GTGTGGTCAGATGGGTCATA+TGG | 0.470569 | 7.2:+46045191 | MS.gene57277:CDS |
GCTGTCCCTACTGCTCAGTA+TGG | 0.471126 | 7.2:+46048933 | MS.gene57277:CDS |
CTTCGGGAACTTATTCTTGT+CGG | 0.474101 | 7.2:+46048670 | MS.gene57277:CDS |
CCTTGAGATCAGACGCAAAA+GGG | 0.475380 | 7.2:-46047262 | None:intergenic |
GCCATAAAGAGAAGCTTCCT+AGG | 0.479509 | 7.2:-46037444 | None:intergenic |
GGATGCTGATTTGATCATGT+TGG | 0.481056 | 7.2:+46039114 | MS.gene57277:intron |
CAGATTAAGTTAGGAGAACC+AGG | 0.483475 | 7.2:+46046918 | MS.gene57277:intron |
ATGTCTTCCATGCCTGCAAC+AGG | 0.483686 | 7.2:-46048231 | None:intergenic |
GCAAAAGGGGCATAATGATA+AGG | 0.485903 | 7.2:-46047248 | None:intergenic |
ATGCTTCCTGTGTGGTCAGA+TGG | 0.486306 | 7.2:+46045182 | MS.gene57277:CDS |
AGATACCATCATCCCATGAA+TGG | 0.486403 | 7.2:+46048756 | MS.gene57277:CDS |
TAAAATGCTCCACCCTGCTC+AGG | 0.487371 | 7.2:-46045885 | None:intergenic |
TAATACCTCTCTTTCCAGCC+TGG | 0.489333 | 7.2:-46046936 | None:intergenic |
CAGGTCACCTGTTGCAGGCA+TGG | 0.490279 | 7.2:+46048224 | MS.gene57277:CDS |
TCGGTCATAAGTTTCCTATA+CGG | 0.491890 | 7.2:-46047477 | None:intergenic |
ATGGCGTCGACAACCACCTT+AGG | 0.491933 | 7.2:-46037116 | None:intergenic |
TGTTGGTCCTCAAGTTCAAC+CGG | 0.495116 | 7.2:+46046186 | MS.gene57277:CDS |
CATTCAAAATCAATCTCAAA+AGG | 0.496803 | 7.2:-46045444 | None:intergenic |
ATCTGTGACTCTTGTTTAGG+AGG | 0.497579 | 7.2:-46038654 | None:intergenic |
ACTCCAATAAGCTGGTCAAA+TGG | 0.499229 | 7.2:-46047332 | None:intergenic |
CCCTTGAGATCAGACGCAAA+AGG | 0.501363 | 7.2:-46047263 | None:intergenic |
CTTCCCCATTTCAACAATCT+GGG | 0.504697 | 7.2:+46046266 | MS.gene57277:CDS |
TGAATGGAAAACGCTTTGCT+TGG | 0.504854 | 7.2:+46047635 | MS.gene57277:CDS |
AATACGTTGAAGGTTTATGT+TGG | 0.504971 | 7.2:+46047100 | MS.gene57277:CDS |
CGTGATTCATAACTATAGCC+AGG | 0.505568 | 7.2:-46048849 | None:intergenic |
GGTGCAAATGTTCCTGGCGA+AGG | 0.506372 | 7.2:+46038917 | MS.gene57277:CDS |
AGTTGAAAGCAAAACTGAAA+AGG | 0.508416 | 7.2:+46046534 | MS.gene57277:CDS |
CTCAAACACTTCATCGAAAG+AGG | 0.509020 | 7.2:-46037379 | None:intergenic |
CATAGATGGTGTTGCTCCAA+GGG | 0.509258 | 7.2:+46038431 | MS.gene57277:intron |
TTAGGAGCCAACCTTTCTAT+GGG | 0.510502 | 7.2:-46047989 | None:intergenic |
ATAGGGTGCAATTAACTCGC+TGG | 0.511716 | 7.2:+46045696 | MS.gene57277:intron |
GTGGCATTGCAGCATACCCT+AGG | 0.512818 | 7.2:-46048872 | None:intergenic |
AGTGTGAAGGAAAGGCAAAA+AGG | 0.513934 | 7.2:+46045220 | MS.gene57277:CDS |
CTTAGGTTGAACAATGATCC+TGG | 0.517293 | 7.2:+46038753 | MS.gene57277:CDS |
AGGAAGCATTTATCTTGTCC+AGG | 0.519867 | 7.2:-46045168 | None:intergenic |
TAAAACCCGAACCTGTTATG+TGG | 0.522490 | 7.2:+46048622 | MS.gene57277:CDS |
GGTTGAACAATGATCCTGGT+TGG | 0.524016 | 7.2:+46038757 | MS.gene57277:CDS |
AGAGATTCCGGTTGAACTTG+AGG | 0.524016 | 7.2:-46046193 | None:intergenic |
TCTCAAACCCTGACCTGGAA+AGG | 0.524675 | 7.2:-46045285 | None:intergenic |
ACATGCAGTGGTGGAATGAA+TGG | 0.525756 | 7.2:+46048159 | MS.gene57277:intron |
TGCATCCATATTGACATGCA+AGG | 0.525832 | 7.2:-46048730 | None:intergenic |
TCTGAACATTTGGACTCTGA+GGG | 0.527129 | 7.2:+46045386 | MS.gene57277:CDS |
GTGATGCATTATTATTATGA+AGG | 0.527641 | 7.2:+46047123 | MS.gene57277:CDS |
ATAAGTTTCCTATACGGCTC+AGG | 0.528063 | 7.2:-46047471 | None:intergenic |
TAGGTCTTGAAATACGTTGA+AGG | 0.531069 | 7.2:+46047090 | MS.gene57277:intron |
TGAGAAATCTGTAGAAAGCT+GGG | 0.531931 | 7.2:-46037082 | None:intergenic |
TTGATCCATTCATGGGATGA+TGG | 0.532304 | 7.2:-46048761 | None:intergenic |
TTAAGTTAGGAGAACCAGGC+TGG | 0.532957 | 7.2:+46046922 | MS.gene57277:CDS |
GCATAGATGGTGTTGCTCCA+AGG | 0.533011 | 7.2:+46038430 | MS.gene57277:intron |
TCTGGTAGGAGAAAACCTTC+GGG | 0.533275 | 7.2:+46048654 | MS.gene57277:CDS |
GGCATTGTTGATCCATTCAT+GGG | 0.533355 | 7.2:-46048768 | None:intergenic |
GTGCAAATGTTCCTGGCGAA+GGG | 0.534016 | 7.2:+46038918 | MS.gene57277:CDS |
TTCTGAACATTTGGACTCTG+AGG | 0.534091 | 7.2:+46045385 | MS.gene57277:CDS |
TGTAGGCTGCTGAAGAATCA+AGG | 0.534919 | 7.2:+46038595 | MS.gene57277:intron |
ATACGTTGAAGGTTTATGTT+GGG | 0.535199 | 7.2:+46047101 | MS.gene57277:CDS |
CTATTCTCAGGGTGGAAGCA+AGG | 0.536177 | 7.2:-46037254 | None:intergenic |
AGATGAACCAACAACGGTCT+AGG | 0.536253 | 7.2:+46038457 | MS.gene57277:CDS |
AAGGTGTTTGTTCTTGGCAA+TGG | 0.540258 | 7.2:+46047142 | MS.gene57277:CDS |
ACTGTTACTTTAGCGACAAG+TGG | 0.542064 | 7.2:+46046123 | MS.gene57277:intron |
TGTTTGTCATAGTCAGGCCT+AGG | 0.542070 | 7.2:+46037427 | MS.gene57277:CDS |
CTGGAAAGAGAGGTATTATG+AGG | 0.542231 | 7.2:+46046941 | MS.gene57277:CDS |
GCAACAGGTGACCTGAAGAA+AGG | 0.542289 | 7.2:-46048216 | None:intergenic |
AGCTGGTCAAATGGTTTGAA+CGG | 0.543045 | 7.2:-46047323 | None:intergenic |
GCAGTAGGGACAGCATTGTA+TGG | 0.548603 | 7.2:-46048924 | None:intergenic |
CGATACATACCAAACCATAC+AGG | 0.550001 | 7.2:-46039012 | None:intergenic |
TTATAACCATACTGAGCAGT+AGG | 0.550726 | 7.2:-46048939 | None:intergenic |
GGCTGCAGAGTGTGAAGGAA+AGG | 0.551431 | 7.2:+46045212 | MS.gene57277:CDS |
GAGAACCAGGCTGGAAAGAG+AGG | 0.552968 | 7.2:+46046931 | MS.gene57277:CDS |
TATAGTTATGAATCACGCCT+AGG | 0.557168 | 7.2:+46048855 | MS.gene57277:CDS |
TTATTTGACAAATGGCAGTA+AGG | 0.558505 | 7.2:+46045756 | MS.gene57277:CDS |
CAATCGATCATAGACAATCA+TGG | 0.559343 | 7.2:+46048802 | MS.gene57277:CDS |
AAACTTTACTCGGTTTCTCA+AGG | 0.559552 | 7.2:-46046303 | None:intergenic |
ATCTCTAGCGTAGGCATGTG+TGG | 0.561809 | 7.2:-46045519 | None:intergenic |
ACAATCTGGGCATAATAAAG+AGG | 0.562455 | 7.2:+46046279 | MS.gene57277:CDS |
GATTCAAATGTAATCACACC+TGG | 0.562626 | 7.2:+46038681 | MS.gene57277:CDS |
TGCTTCCTGTGTGGTCAGAT+GGG | 0.563089 | 7.2:+46045183 | MS.gene57277:CDS |
CTAGCGTAGGCATGTGTGGT+AGG | 0.565372 | 7.2:-46045515 | None:intergenic |
TTCTCAGCCAAACCTGAGCA+GGG | 0.566686 | 7.2:+46045873 | MS.gene57277:intron |
TGAATGTCGTCGATAACCAC+AGG | 0.567609 | 7.2:-46037149 | None:intergenic |
AACGAATTTACGAAATTGGG+TGG | 0.569792 | 7.2:+46045733 | MS.gene57277:CDS |
CATATTAACCGACCACTGCA+TGG | 0.570409 | 7.2:+46048398 | MS.gene57277:CDS |
GAATGACGCCGTTCATGTCA+AGG | 0.571800 | 7.2:-46037229 | None:intergenic |
GGTTACATATCCTTCTGTGA+TGG | 0.572381 | 7.2:+46048180 | MS.gene57277:CDS |
TAATGCACGCAGAGAGAGGA+TGG | 0.572444 | 7.2:-46047898 | None:intergenic |
TAGCAGGTATACCTTGCAGC+AGG | 0.574832 | 7.2:-46047359 | None:intergenic |
GATAACCTAGAAACTTTACT+CGG | 0.578342 | 7.2:-46046313 | None:intergenic |
TATTCTCAGGGTGGAAGCAA+GGG | 0.581056 | 7.2:-46037253 | None:intergenic |
GGAAAACGCTTTGCTTGGCA+GGG | 0.586451 | 7.2:+46047640 | MS.gene57277:CDS |
AGATATTGGCGAGCTTGGAT+CGG | 0.586502 | 7.2:-46047496 | None:intergenic |
CTGTGAACGTGCCAATGTCA+AGG | 0.587462 | 7.2:+46047955 | MS.gene57277:CDS |
CATGATTGTCTATGATCGAT+TGG | 0.590504 | 7.2:-46048801 | None:intergenic |
AGGGATGAATTTGAGACGGA+GGG | 0.594594 | 7.2:+46038621 | MS.gene57277:CDS |
ATAGTTATGAATCACGCCTA+GGG | 0.594615 | 7.2:+46048856 | MS.gene57277:CDS |
CAGGTGACCTGAAGAAAGGA+GGG | 0.594664 | 7.2:-46048212 | None:intergenic |
TCTCACTGAGAAATATCCTA+AGG | 0.596316 | 7.2:+46037100 | MS.gene57277:CDS |
AACCACAGGTTCTTCCTCGA+TGG | 0.597909 | 7.2:-46037135 | None:intergenic |
TTCAGGAGCAACTGTTGCTG+CGG | 0.600906 | 7.2:+46046336 | MS.gene57277:CDS |
CTTGAGATCAGACGCAAAAG+GGG | 0.601921 | 7.2:-46047261 | None:intergenic |
GACCTGAAGAAAGGAGGGCA+AGG | 0.605078 | 7.2:-46048207 | None:intergenic |
CAAGCAAGAGGAGATGATGT+TGG | 0.606266 | 7.2:+46046169 | MS.gene57277:CDS |
CCAGATTGTTGAAATGGGGA+AGG | 0.606572 | 7.2:-46046265 | None:intergenic |
AATTGATATTAAGCTCGCTA+AGG | 0.609442 | 7.2:-46047286 | None:intergenic |
GCTGCAATTTCACAATTCCA+CGG | 0.609756 | 7.2:+46046217 | MS.gene57277:CDS |
ATTTAACTCCATGCAGTGGT+CGG | 0.609974 | 7.2:-46048406 | None:intergenic |
TCATCGAAAGAGGTAGGAGA+TGG | 0.611346 | 7.2:-46037369 | None:intergenic |
GGAAATTTAACTCCATGCAG+TGG | 0.612934 | 7.2:-46048410 | None:intergenic |
TTCTTGTCGGCAGCTTAAGG+AGG | 0.614996 | 7.2:+46048683 | MS.gene57277:CDS |
GCAAGGTTCTCCATCACAGA+AGG | 0.615310 | 7.2:-46048190 | None:intergenic |
ACAGGTGACCTGAAGAAAGG+AGG | 0.616069 | 7.2:-46048213 | None:intergenic |
GTACTAATGCACGCAGAGAG+AGG | 0.618416 | 7.2:-46047902 | None:intergenic |
CGCCATCGAGGAAGAACCTG+TGG | 0.619118 | 7.2:+46037133 | MS.gene57277:CDS |
GATGTATTCAACTCAAAAGG+TGG | 0.619939 | 7.2:+46046575 | MS.gene57277:CDS |
CGTCGGAAGAGACAAGCAAG+AGG | 0.620774 | 7.2:+46046157 | MS.gene57277:CDS |
AACACTTCATCGAAAGAGGT+AGG | 0.625146 | 7.2:-46037375 | None:intergenic |
ATGCCCAGATTGTTGAAATG+GGG | 0.626410 | 7.2:-46046269 | None:intergenic |
GTTAAGGGATGAATTTGAGA+CGG | 0.629392 | 7.2:+46038617 | MS.gene57277:CDS |
CACTGAGAAATATCCTAAGG+TGG | 0.635432 | 7.2:+46037103 | MS.gene57277:CDS |
AAGGGATGAATTTGAGACGG+AGG | 0.639872 | 7.2:+46038620 | MS.gene57277:CDS |
TATAACCATACTGAGCAGTA+GGG | 0.640091 | 7.2:-46048938 | None:intergenic |
TGTGGCATGAAGATTCTGGT+AGG | 0.640277 | 7.2:+46048640 | MS.gene57277:CDS |
GCATTGTATGGTACAAACTG+TGG | 0.641789 | 7.2:-46048912 | None:intergenic |
CGACAAGAATAAGTTCCCGA+AGG | 0.641881 | 7.2:-46048669 | None:intergenic |
GTGATTCATAACTATAGCCA+GGG | 0.643668 | 7.2:-46048848 | None:intergenic |
TGTGATTCATAGTTATTGCG+AGG | 0.644234 | 7.2:-46048825 | None:intergenic |
ACCTCACGAATCTCTAGCGT+AGG | 0.647510 | 7.2:-46045528 | None:intergenic |
AAAAGGTGGTCATGAAGACA+AGG | 0.648170 | 7.2:+46046589 | MS.gene57277:CDS |
AAGTGGAAACAATAAAGCGT+CGG | 0.648597 | 7.2:+46046140 | MS.gene57277:CDS |
TGCAAATGTTCCTGGCGAAG+GGG | 0.648779 | 7.2:+46038919 | MS.gene57277:CDS |
ACGGTCTAGGCGGTTTAGGG+CGG | 0.651340 | 7.2:+46038470 | MS.gene57277:CDS |
GGACAAGTTGATAAAGGTGG+TGG | 0.655951 | 7.2:-46048891 | None:intergenic |
AATAACTATGAATCACACCC+TGG | 0.662800 | 7.2:+46048831 | MS.gene57277:CDS |
ATTTCTTTGAAGGCGAACGT+AGG | 0.664308 | 7.2:-46038957 | None:intergenic |
CTGAAGCAAGACGAGAACCG+TGG | 0.670349 | 7.2:-46046234 | None:intergenic |
AAGGATATGATCCCAATACA+CGG | 0.672716 | 7.2:+46038984 | MS.gene57277:CDS |
CATATGGCTGCAGAGTGTGA+AGG | 0.678211 | 7.2:+46045207 | MS.gene57277:CDS |
GGTGGTTGTCGACGCCATCG+AGG | 0.685680 | 7.2:+46037121 | MS.gene57277:CDS |
GGGCTAAGATGAACCAACAA+CGG | 0.692609 | 7.2:+46038451 | MS.gene57277:CDS |
TCAGCCAAACCTGAGCAGGG+TGG | 0.715072 | 7.2:+46045876 | MS.gene57277:intron |
TGAACCAACAACGGTCTAGG+CGG | 0.725205 | 7.2:+46038460 | MS.gene57277:CDS |
TATGACCCATCTGACCACAC+AGG | 0.729296 | 7.2:-46045188 | None:intergenic |
CAAGATAAATGCTTCCTGTG+TGG | 0.745597 | 7.2:+46045174 | MS.gene57277:CDS |
TTGTCTATGATCGATTGGTG+CGG | 0.745607 | 7.2:-46048796 | None:intergenic |
TGTGGACAAGTTGATAAAGG+TGG | 0.747002 | 7.2:-46048894 | None:intergenic |
GCCTACGCTAGAGATTCGTG+AGG | 0.759520 | 7.2:+46045527 | MS.gene57277:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 46037074 | 46048954 | 46037074 | ID=MS.gene57277 |
chr7.2 | mRNA | 46037074 | 46048954 | 46037074 | ID=MS.gene57277.t1;Parent=MS.gene57277 |
chr7.2 | exon | 46037074 | 46037277 | 46037074 | ID=MS.gene57277.t1.exon1;Parent=MS.gene57277.t1 |
chr7.2 | CDS | 46037074 | 46037277 | 46037074 | ID=cds.MS.gene57277.t1;Parent=MS.gene57277.t1 |
chr7.2 | exon | 46037369 | 46037471 | 46037369 | ID=MS.gene57277.t1.exon2;Parent=MS.gene57277.t1 |
chr7.2 | CDS | 46037369 | 46037471 | 46037369 | ID=cds.MS.gene57277.t1;Parent=MS.gene57277.t1 |
chr7.2 | exon | 46038436 | 46038512 | 46038436 | ID=MS.gene57277.t1.exon3;Parent=MS.gene57277.t1 |
chr7.2 | CDS | 46038436 | 46038512 | 46038436 | ID=cds.MS.gene57277.t1;Parent=MS.gene57277.t1 |
chr7.2 | exon | 46038600 | 46038791 | 46038600 | ID=MS.gene57277.t1.exon4;Parent=MS.gene57277.t1 |
chr7.2 | CDS | 46038600 | 46038791 | 46038600 | ID=cds.MS.gene57277.t1;Parent=MS.gene57277.t1 |
chr7.2 | exon | 46038905 | 46039024 | 46038905 | ID=MS.gene57277.t1.exon5;Parent=MS.gene57277.t1 |
chr7.2 | CDS | 46038905 | 46039024 | 46038905 | ID=cds.MS.gene57277.t1;Parent=MS.gene57277.t1 |
chr7.2 | exon | 46039115 | 46039177 | 46039115 | ID=MS.gene57277.t1.exon6;Parent=MS.gene57277.t1 |
chr7.2 | CDS | 46039115 | 46039177 | 46039115 | ID=cds.MS.gene57277.t1;Parent=MS.gene57277.t1 |
chr7.2 | exon | 46045156 | 46045293 | 46045156 | ID=MS.gene57277.t1.exon7;Parent=MS.gene57277.t1 |
chr7.2 | CDS | 46045156 | 46045293 | 46045156 | ID=cds.MS.gene57277.t1;Parent=MS.gene57277.t1 |
chr7.2 | exon | 46045384 | 46045548 | 46045384 | ID=MS.gene57277.t1.exon8;Parent=MS.gene57277.t1 |
chr7.2 | CDS | 46045384 | 46045548 | 46045384 | ID=cds.MS.gene57277.t1;Parent=MS.gene57277.t1 |
chr7.2 | exon | 46045700 | 46045777 | 46045700 | ID=MS.gene57277.t1.exon9;Parent=MS.gene57277.t1 |
chr7.2 | CDS | 46045700 | 46045777 | 46045700 | ID=cds.MS.gene57277.t1;Parent=MS.gene57277.t1 |
chr7.2 | exon | 46045880 | 46045966 | 46045880 | ID=MS.gene57277.t1.exon10;Parent=MS.gene57277.t1 |
chr7.2 | CDS | 46045880 | 46045966 | 46045880 | ID=cds.MS.gene57277.t1;Parent=MS.gene57277.t1 |
chr7.2 | exon | 46046136 | 46046393 | 46046136 | ID=MS.gene57277.t1.exon11;Parent=MS.gene57277.t1 |
chr7.2 | CDS | 46046136 | 46046393 | 46046136 | ID=cds.MS.gene57277.t1;Parent=MS.gene57277.t1 |
chr7.2 | exon | 46046515 | 46046610 | 46046515 | ID=MS.gene57277.t1.exon12;Parent=MS.gene57277.t1 |
chr7.2 | CDS | 46046515 | 46046610 | 46046515 | ID=cds.MS.gene57277.t1;Parent=MS.gene57277.t1 |
chr7.2 | exon | 46046921 | 46047016 | 46046921 | ID=MS.gene57277.t1.exon13;Parent=MS.gene57277.t1 |
chr7.2 | CDS | 46046921 | 46047016 | 46046921 | ID=cds.MS.gene57277.t1;Parent=MS.gene57277.t1 |
chr7.2 | exon | 46047093 | 46047163 | 46047093 | ID=MS.gene57277.t1.exon14;Parent=MS.gene57277.t1 |
chr7.2 | CDS | 46047093 | 46047163 | 46047093 | ID=cds.MS.gene57277.t1;Parent=MS.gene57277.t1 |
chr7.2 | exon | 46047241 | 46047369 | 46047241 | ID=MS.gene57277.t1.exon15;Parent=MS.gene57277.t1 |
chr7.2 | CDS | 46047241 | 46047369 | 46047241 | ID=cds.MS.gene57277.t1;Parent=MS.gene57277.t1 |
chr7.2 | exon | 46047458 | 46047534 | 46047458 | ID=MS.gene57277.t1.exon16;Parent=MS.gene57277.t1 |
chr7.2 | CDS | 46047458 | 46047534 | 46047458 | ID=cds.MS.gene57277.t1;Parent=MS.gene57277.t1 |
chr7.2 | exon | 46047620 | 46047735 | 46047620 | ID=MS.gene57277.t1.exon17;Parent=MS.gene57277.t1 |
chr7.2 | CDS | 46047620 | 46047735 | 46047620 | ID=cds.MS.gene57277.t1;Parent=MS.gene57277.t1 |
chr7.2 | exon | 46047842 | 46047999 | 46047842 | ID=MS.gene57277.t1.exon18;Parent=MS.gene57277.t1 |
chr7.2 | CDS | 46047842 | 46047999 | 46047842 | ID=cds.MS.gene57277.t1;Parent=MS.gene57277.t1 |
chr7.2 | exon | 46048167 | 46048271 | 46048167 | ID=MS.gene57277.t1.exon19;Parent=MS.gene57277.t1 |
chr7.2 | CDS | 46048167 | 46048271 | 46048167 | ID=cds.MS.gene57277.t1;Parent=MS.gene57277.t1 |
chr7.2 | exon | 46048364 | 46048439 | 46048364 | ID=MS.gene57277.t1.exon20;Parent=MS.gene57277.t1 |
chr7.2 | CDS | 46048364 | 46048439 | 46048364 | ID=cds.MS.gene57277.t1;Parent=MS.gene57277.t1 |
chr7.2 | exon | 46048603 | 46048954 | 46048603 | ID=MS.gene57277.t1.exon21;Parent=MS.gene57277.t1 |
chr7.2 | CDS | 46048603 | 46048954 | 46048603 | ID=cds.MS.gene57277.t1;Parent=MS.gene57277.t1 |
Gene Sequence |
Protein sequence |