AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene03315

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene03315.t1 MTR_4g051920 42.414 870 344 16 1 857 1 726 0.0 627
MS.gene03315.t1 MTR_7g114570 63.063 444 146 6 1 442 1 428 5.74e-180 556
MS.gene03315.t1 MTR_7g114570 50.000 326 145 4 549 874 439 746 1.36e-95 329
MS.gene03315.t1 MTR_7g114570 63.063 444 146 6 1 442 1 428 9.02e-180 556
MS.gene03315.t1 MTR_7g114570 50.920 326 153 3 549 874 439 757 5.98e-100 341
MS.gene03315.t1 MTR_1g067040 39.691 194 90 7 1052 1221 210 400 3.29e-28 120
MS.gene03315.t1 MTR_5g004690 73.077 52 14 0 1217 1268 27 78 1.13e-15 73.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene03315.t1 AT1G75660 69.575 894 222 11 1 874 1 864 0.0 1196
MS.gene03315.t1 AT5G42540 59.172 894 311 14 1 874 1 860 0.0 1004
MS.gene03315.t1 AT5G42540 59.414 887 309 13 1 874 1 849 0.0 1001
MS.gene03315.t1 AT1G54490 63.297 455 143 8 1 453 1 433 0.0 562
MS.gene03315.t1 AT1G54490 49.600 375 176 6 521 894 412 774 1.55e-101 345
MS.gene03315.t1 AT1G54490 64.116 379 124 6 77 453 7 375 4.49e-150 476
MS.gene03315.t1 AT1G54490 49.600 375 176 6 521 894 354 716 2.55e-102 346
MS.gene03315.t1 AT5G02820 39.691 194 90 7 1052 1221 220 410 2.24e-28 120

Find 345 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGGAGTTGGCTTAGGGTTT+TGG 0.145998 6.2:+30830300 None:intergenic
CCCGGAAAGTTTCTTCTCTT+TGG 0.162132 6.2:-30830191 MS.gene03315:CDS
CCCGGAAAGTTTCTTCTCTT+TGG 0.162132 6.2:-30830233 MS.gene03315:CDS
TGCAATTCGTCAATCCATTT+TGG 0.163331 6.2:+30829695 None:intergenic
CCGGAAAGTTTCTTCTCTTT+GGG 0.173501 6.2:-30830190 MS.gene03315:CDS
CCGGAAAGTTTCTTCTCTTT+GGG 0.173501 6.2:-30830232 MS.gene03315:CDS
TTATCATATTCAAGATTATT+AGG 0.184132 6.2:+30838867 None:intergenic
ACCCGACCGGGATCCGTTTC+TGG 0.192749 6.2:-30830700 MS.gene03315:CDS
GCCTAGGAAGCTTCTCTTTA+TGG 0.199961 6.2:-30838060 MS.gene03315:CDS
GTTTGTAGTTTCTGAATATT+TGG 0.223066 6.2:-30836374 MS.gene03315:intron
TCAGGAGAATTTGATGAAAA+AGG 0.233715 6.2:-30836510 MS.gene03315:CDS
AAACCATTTGATCAGCTTCT+TGG 0.239288 6.2:-30832527 MS.gene03315:CDS
TGCTCGACTCTGCTCAAATT+TGG 0.250358 6.2:+30835805 None:intergenic
CCCAAAGAGAAGAAACTTTC+CGG 0.254606 6.2:+30830190 None:intergenic
CCCAAAGAGAAGAAACTTTC+CGG 0.254606 6.2:+30830232 None:intergenic
TCCCCAACTTGTTACGAAAA+TGG 0.264093 6.2:-30830077 MS.gene03315:CDS
AGGGAGTTGGAGGGAGTTGG+AGG 0.266497 6.2:+30830273 None:intergenic
ATTGGATAAAAGTCAATAAT+TGG 0.272607 6.2:+30832344 None:intergenic
AAAGTTGCCGATTCCTCTTT+AGG 0.277058 6.2:+30837276 None:intergenic
ACTAAAGTTTGGCTTGGTTT+TGG 0.277672 6.2:+30829428 None:intergenic
ATTTCAAAACTCGTCCAAAA+TGG 0.281173 6.2:-30829709 MS.gene03315:CDS
AAGCTTCTCTTTATGGCTAT+TGG 0.293967 6.2:-30838053 MS.gene03315:intron
TTGAAGATGTTGGCTTTCTA+TGG 0.295610 6.2:-30829863 MS.gene03315:CDS
ATTTCAAGTGGCTGGGGATT+AGG 0.301111 6.2:-30829826 MS.gene03315:CDS
AACCCTGTCCTCCCATCTTC+AGG 0.302826 6.2:-30831419 MS.gene03315:CDS
ATTCAGTAGCAACATGAGTA+TGG 0.305636 6.2:+30830020 None:intergenic
TTCCCTGGCTTTCAAATTGA+TGG 0.308860 6.2:+30830378 None:intergenic
GAGTTGGAGGGAGTTGGAGG+GGG 0.309344 6.2:+30830276 None:intergenic
AATTGTGGCTATCGACGATT+TGG 0.312704 6.2:+30830449 None:intergenic
ATTATCATTTAATATATCTT+TGG 0.318352 6.2:+30829733 None:intergenic
CTCCACAAGCCATCTGTAAA+AGG 0.320160 6.2:+30838986 None:intergenic
TCATGCCATGGAACAGGTTC+AGG 0.320171 6.2:+30830886 None:intergenic
ACTATGAAGGTGTTTGTTCT+TGG 0.320479 6.2:-30833440 MS.gene03315:CDS
ATCTTCAGGTCCCCTATTGC+AGG 0.325511 6.2:-30831405 MS.gene03315:CDS
ATCTATTTCAAGACTATTCT+CGG 0.326915 6.2:+30834896 None:intergenic
TGATGAAGTGCGTCTTCTTC+AGG 0.329315 6.2:-30832077 MS.gene03315:CDS
GGAGTTGGAGGGAGTTGGAG+GGG 0.330109 6.2:+30830275 None:intergenic
CCGAGGAACTTGATGCTATA+AGG 0.332116 6.2:-30833598 MS.gene03315:CDS
TTCCGTGCAGTTTGCTTGTA+TGG 0.332593 6.2:-30830104 MS.gene03315:CDS
AGACGCACTTCATCAATAAA+AGG 0.333488 6.2:+30832085 None:intergenic
TACAATACTATATTCATCTT+AGG 0.337529 6.2:-30837197 MS.gene03315:CDS
CTCTGAACGTGCTGATGTTA+AGG 0.342982 6.2:-30831766 MS.gene03315:CDS
TATCATATTCAAGATTATTA+GGG 0.344500 6.2:+30838868 None:intergenic
AGTTGGAGGGAGTTGGAGGG+GGG 0.349831 6.2:+30830277 None:intergenic
CCTGCACCATTTCAACAATC+TGG 0.349992 6.2:-30835020 MS.gene03315:CDS
CTTTCTGATGCAAATGTTCC+CGG 0.352759 6.2:-30837040 MS.gene03315:CDS
TCGATCTCAAAAGGAGGATT+AGG 0.358412 6.2:+30836315 None:intergenic
GGGAGGGAGTTGGAGGGAGT+TGG 0.360028 6.2:+30830270 None:intergenic
AGATAACTTAGAAACTTTAC+TGG 0.360113 6.2:+30834953 None:intergenic
TAAAGTTTCTAAGTTATCTT+CGG 0.362977 6.2:-30834949 MS.gene03315:CDS
AATGGTGTGCAACTAAAGTT+TGG 0.365662 6.2:+30829417 None:intergenic
ATGTCTTCCATGCCTGCAAT+AGG 0.371620 6.2:+30831393 None:intergenic
CACACCTGGAACTGAATTCA+TGG 0.374752 6.2:-30837238 MS.gene03315:CDS
GTTCCATGGCATGAAGCTAA+TGG 0.376554 6.2:-30830877 MS.gene03315:CDS
TTCTACAGACTATGACAATT+GGG 0.377262 6.2:-30830918 MS.gene03315:intron
TTTCTACAGACTATGACAAT+TGG 0.378411 6.2:-30830919 MS.gene03315:intron
GCATGTTTGATTACATTGAT+AGG 0.378445 6.2:-30838100 MS.gene03315:CDS
TACTCATGTTGCTACTGAAT+TGG 0.380619 6.2:-30830017 MS.gene03315:CDS
ATCCTTCAAGATTTCTTTGA+AGG 0.380883 6.2:+30836984 None:intergenic
TTGGGGTTGACGCCGGTGAA+TGG 0.382212 6.2:-30830172 MS.gene03315:CDS
ATTTCTTTGAAGGCGGATAT+AGG 0.382834 6.2:+30836994 None:intergenic
GGTGTAGGGCTTCGTGCCTT+TGG 0.384068 6.2:+30830477 None:intergenic
GTCCGCCTGCTTTCTTGATC+AGG 0.385261 6.2:-30829943 MS.gene03315:CDS
CTTAATATTAACTTTGAGTT+GGG 0.387432 6.2:-30832560 MS.gene03315:CDS
CAAATGCTTGTGTGGTCAAA+TGG 0.388119 6.2:-30836574 MS.gene03315:CDS
TTTCATCTTCGACGAGGCTT+TGG 0.389083 6.2:+30830612 None:intergenic
TGAAACTGCAGCTTGAAGAT+TGG 0.391344 6.2:-30829583 MS.gene03315:intron
CCCCTTTGCGTCTGATCTGA+AGG 0.393708 6.2:-30832594 MS.gene03315:CDS
GGGCTTCGTGCCTTTGGCTA+AGG 0.397462 6.2:+30830483 None:intergenic
TCCGTTTCTGGTCGGGAGCT+TGG 0.398669 6.2:-30830688 MS.gene03315:CDS
AGCATACAAGAAGGAACTTA+AGG 0.399700 6.2:-30835972 MS.gene03315:CDS
CTGTGCACCAACCTTTCAAC+AGG 0.399752 6.2:+30831732 None:intergenic
AAGAAAATTACCCTATCTTC+AGG 0.399804 6.2:+30838801 None:intergenic
TGATGCGCTCTTCATTCTCT+TGG 0.403238 6.2:-30830047 MS.gene03315:CDS
AAAGTTTCTAAGTTATCTTC+GGG 0.406060 6.2:-30834948 MS.gene03315:CDS
TCAGTCATAAGTTTCCTATA+TGG 0.409072 6.2:+30832377 None:intergenic
CTGGAATAACGGAAGGGCTT+TGG 0.411423 6.2:+30830516 None:intergenic
CTTTGGCGGAGGATGACAAC+GGG 0.413665 6.2:+30830629 None:intergenic
CGCCTTCAAAGAAATCTTGA+AGG 0.414724 6.2:-30836986 MS.gene03315:CDS
TAAACCGCCTTGACCGTTGC+TGG 0.416833 6.2:+30837907 None:intergenic
AAAACGAGCTCGAACGCAAC+AGG 0.419452 6.2:-30835740 MS.gene03315:intron
TGTCTTCCATGCCTGCAATA+GGG 0.420068 6.2:+30831394 None:intergenic
TATTCAAGATTATTAGGGTT+GGG 0.420701 6.2:+30838873 None:intergenic
CTCAATATCCTTACTATCCA+TGG 0.424450 6.2:+30829760 None:intergenic
TTGGACTCTGAGGGAATGTC+TGG 0.425345 6.2:-30836355 MS.gene03315:CDS
ACCGGGATCCGTTTCTGGTC+GGG 0.425589 6.2:-30830695 MS.gene03315:CDS
ATGCCCTGCCTGAGCCATAT+AGG 0.425867 6.2:-30832391 MS.gene03315:CDS
AGCTGATCAAATGGTTTGAA+TGG 0.427200 6.2:+30832533 None:intergenic
TGTTTAACATGGTGCGGCCT+AGG 0.428483 6.2:-30838076 MS.gene03315:CDS
TGGGGTTGACGCCGGTGAAT+GGG 0.429345 6.2:-30830171 MS.gene03315:CDS
CATCTTCGACGAGGCTTTGG+CGG 0.429600 6.2:+30830615 None:intergenic
GCCCCATCAATTTGAAAGCC+AGG 0.433144 6.2:-30830381 MS.gene03315:CDS
TCCAAGCTCCCGACCAGAAA+CGG 0.434588 6.2:+30830687 None:intergenic
AATCTTATGCTCCCCTTCAC+CGG 0.435640 6.2:+30837021 None:intergenic
GCAGCCATGAATTCAGTTCC+AGG 0.442610 6.2:+30837234 None:intergenic
TTCCATGGCATGAAGCTAAT+GGG 0.443751 6.2:-30830876 MS.gene03315:CDS
GGGAGTTGGAGGGAGTTGGA+GGG 0.446143 6.2:+30830274 None:intergenic
CAAGATGCTAAAAGAGATGA+TGG 0.447185 6.2:-30829458 MS.gene03315:CDS
GGAAAGGCTAAAAGGAAGTC+AGG 0.447502 6.2:-30836528 MS.gene03315:CDS
TTAGCTTCATGCCATGGAAC+AGG 0.447514 6.2:+30830880 None:intergenic
GATTGGATTTGAAGCTAAGC+TGG 0.448987 6.2:-30829566 MS.gene03315:CDS
CCTCTATCCGATGGGAGTTC+CGG 0.449475 6.2:-30839009 None:intergenic
GGACCTGAAGATGGGAGGAC+AGG 0.450117 6.2:+30831416 None:intergenic
ATGCCGATGATGTCGGAATC+GGG 0.452199 6.2:+30830349 None:intergenic
CAGATTAAATTGGGAGAACC+AGG 0.456576 6.2:-30833665 MS.gene03315:CDS
AGAAGAAACTTTCCGGGTCG+TGG 0.457075 6.2:+30830197 None:intergenic
TCTGATGTGTTCAACTCAAA+AGG 0.458187 6.2:-30834618 MS.gene03315:CDS
ACACCTCCTCAAAAGAGGTC+GGG 0.458509 6.2:+30838129 None:intergenic
TCCTGGTTGGAGTAACATAA+AGG 0.458871 6.2:-30837163 MS.gene03315:intron
ACGACATTGTCTGTATGGTT+TGG 0.459408 6.2:-30836948 MS.gene03315:intron
CCAAAGAGAAGAAACTTTCC+GGG 0.460806 6.2:+30830191 None:intergenic
CCAAAGAGAAGAAACTTTCC+GGG 0.460806 6.2:+30830233 None:intergenic
AGTACACGACATTGTCTGTA+TGG 0.462556 6.2:-30836953 MS.gene03315:CDS
TTTCAGGTTGTATTTACTCC+TGG 0.462901 6.2:-30836603 MS.gene03315:intron
GCGTCTGATCTGAAGGGCCT+TGG 0.463297 6.2:-30832587 MS.gene03315:CDS
GCTATATGTTCATGTGCATC+TGG 0.467409 6.2:+30831157 None:intergenic
GATGCCGATGATGTCGGAAT+CGG 0.468837 6.2:+30830348 None:intergenic
TATCATCTCCATGGATAGTA+AGG 0.468988 6.2:-30829768 MS.gene03315:CDS
CTTCTCTTTGGGGTTGACGC+CGG 0.469187 6.2:-30830179 MS.gene03315:CDS
TGCAATAGGGGACCTGAAGA+TGG 0.469373 6.2:+30831407 None:intergenic
TGGCTAAGGGATACGTGAAC+TGG 0.469817 6.2:+30830497 None:intergenic
GTGTGGTCAAATGGGTCATA+TGG 0.470523 6.2:-30836565 MS.gene03315:CDS
ACTTCCTCCTAAAGAGGAAT+CGG 0.472690 6.2:-30837283 MS.gene03315:CDS
GTATCCAGCAAGGCTAAAAC+AGG 0.473082 6.2:+30829899 None:intergenic
CCCTTCAGATCAGACGCAAA+GGG 0.473297 6.2:+30832593 None:intergenic
TCCCTGGCTTTCAAATTGAT+GGG 0.476697 6.2:+30830379 None:intergenic
ACGATTTGGGTGATGGTGTA+GGG 0.477739 6.2:+30830463 None:intergenic
GGAATCGGGTTTGATTTCCC+TGG 0.478249 6.2:+30830363 None:intergenic
CATTTCAAATTCCCATTCAC+CGG 0.478981 6.2:+30830160 None:intergenic
CCTTATAGCATCAAGTTCCT+CGG 0.479865 6.2:+30833598 None:intergenic
CGGAAAGTTTCTTCTCTTTG+GGG 0.480785 6.2:-30830189 MS.gene03315:CDS
CGGAAAGTTTCTTCTCTTTG+GGG 0.480785 6.2:-30830231 MS.gene03315:CDS
ACCAGAAACGGATCCCGGTC+GGG 0.481726 6.2:+30830699 None:intergenic
ATGCAAATGTTCCCGGTGAA+GGG 0.483331 6.2:-30837033 MS.gene03315:CDS
ACTCCAAGAAGCTGATCAAA+TGG 0.483604 6.2:+30832524 None:intergenic
CATTCAAAATCGATCTCAAA+AGG 0.484401 6.2:+30836306 None:intergenic
GTGGGCCCAGATTGTTGAAA+TGG 0.488546 6.2:+30835014 None:intergenic
TAATACCTCTCTTTCCAGCC+TGG 0.489333 6.2:+30833647 None:intergenic
CTGCACCATTTCAACAATCT+GGG 0.489707 6.2:-30835019 MS.gene03315:CDS
CAAGAAGGAACTTAAGGGAA+TGG 0.493096 6.2:-30835966 MS.gene03315:CDS
TGATATGATTATGTTGGGTC+TGG 0.494234 6.2:-30836788 MS.gene03315:CDS
GACCGGGATCCGTTTCTGGT+CGG 0.494602 6.2:-30830696 MS.gene03315:CDS
TAACGGAAGGGCTTTGGCGG+AGG 0.495341 6.2:+30830522 None:intergenic
GTCTTCCATGCCTGCAATAG+GGG 0.496088 6.2:+30831395 None:intergenic
CTCAAACACCTCCTCAAAAG+AGG 0.497276 6.2:+30838124 None:intergenic
CTTCGACGAGGCTTTGGCGG+AGG 0.498693 6.2:+30830618 None:intergenic
ATATTTGACAAGCGGTAGTA+AGG 0.498955 6.2:-30835939 MS.gene03315:intron
GAAACTTTCCGGGTCGTAGT+GGG 0.499684 6.2:+30830243 None:intergenic
GAATAACGGAAGGGCTTTGG+CGG 0.500026 6.2:+30830519 None:intergenic
GCTTAATATTAACTTTGAGT+TGG 0.501013 6.2:-30832561 MS.gene03315:CDS
TGAATGGCAAACGCAATACT+TGG 0.502160 6.2:-30832208 MS.gene03315:CDS
AAACTTTCCGGGTCGTGGGG+GGG 0.502383 6.2:+30830202 None:intergenic
AAGTCAATAATTGGCGAGGT+TGG 0.503626 6.2:+30832353 None:intergenic
CTTATAGCATCAAGTTCCTC+GGG 0.504527 6.2:+30833599 None:intergenic
CATTGATAGGCTGTTTAACA+TGG 0.504607 6.2:-30838087 MS.gene03315:CDS
GCATACAAGAAGGAACTTAA+GGG 0.504714 6.2:-30835971 MS.gene03315:CDS
GACGATTTGGGTGATGGTGT+AGG 0.504753 6.2:+30830462 None:intergenic
GCCATAAAGAGAAGCTTCCT+AGG 0.505863 6.2:+30838059 None:intergenic
TCCCGACCAGAAACGGATCC+CGG 0.506194 6.2:+30830694 None:intergenic
TGCAGGCATGGAAGACATCA+TGG 0.506225 6.2:-30831388 MS.gene03315:CDS
ACTGTGAAGGAAAGGCTAAA+AGG 0.507871 6.2:-30836536 MS.gene03315:CDS
CACAAGCATTTGTCTTGACC+AGG 0.508385 6.2:+30836585 None:intergenic
TATCATTCATGTCGAGATAG+AGG 0.509841 6.2:+30838844 None:intergenic
CAAATTGATGGGGCAATCGA+GGG 0.510047 6.2:+30830390 None:intergenic
TTCAGTAGCAACATGAGTAT+GGG 0.510127 6.2:+30830021 None:intergenic
GAAGAAACTTTCCGGGTCGT+GGG 0.510145 6.2:+30830198 None:intergenic
CACCTCCTCAAAAGAGGTCG+GGG 0.510452 6.2:+30838130 None:intergenic
AACTTTCCGGGTCGTAGTGG+GGG 0.510595 6.2:+30830245 None:intergenic
GGCTTCGTGCCTTTGGCTAA+GGG 0.510609 6.2:+30830484 None:intergenic
AGAAACTTTCCGGGTCGTAG+TGG 0.510766 6.2:+30830242 None:intergenic
ATATTCAAGATTATTAGGGT+TGG 0.512954 6.2:+30838872 None:intergenic
TCGATGTTCCTTGAAGATGT+TGG 0.513126 6.2:-30829873 MS.gene03315:CDS
ATAGAAAGCCAACATCTTCA+AGG 0.514839 6.2:+30829865 None:intergenic
ATACATCGAGGGTCTATGTT+GGG 0.514964 6.2:-30833475 MS.gene03315:CDS
GAGATACTGAGCATGGACTT+TGG 0.515434 6.2:+30830420 None:intergenic
CTTAGGTTGAACAATGATCC+TGG 0.517293 6.2:-30837180 MS.gene03315:CDS
TGTTGAAATGGTGCAGGCGT+TGG 0.517474 6.2:+30835026 None:intergenic
ACAGGGTTCTCCACTACATA+AGG 0.517478 6.2:+30831434 None:intergenic
TTGGGTTTGCTAGTGTCTAT+CGG 0.517775 6.2:+30838891 None:intergenic
TTCTGAATATTTGGACTCTG+AGG 0.518941 6.2:-30836365 MS.gene03315:CDS
GGATAAGCACAGCGACTCAA+TGG 0.519292 6.2:+30829643 None:intergenic
TCTCAAACCCTGACCTGGAA+AGG 0.519340 6.2:+30836465 None:intergenic
GATTCAAATGTCATCACACC+TGG 0.521016 6.2:-30837252 MS.gene03315:CDS
CCAGATTGTTGAAATGGTGC+AGG 0.521299 6.2:+30835020 None:intergenic
ATTGTGGCTATCGACGATTT+GGG 0.523113 6.2:+30830450 None:intergenic
AAGAAGGAACTTAAGGGAAT+GGG 0.523737 6.2:-30835965 MS.gene03315:CDS
GAACTTGATTAACTTGCTGA+TGG 0.524094 6.2:-30835996 MS.gene03315:CDS
GGATGCTGATATGATTATGT+TGG 0.525019 6.2:-30836794 MS.gene03315:CDS
CCCCATCAATTTGAAAGCCA+GGG 0.525623 6.2:-30830380 MS.gene03315:CDS
ACATGCAGTGGTGGAATGAA+TGG 0.525756 6.2:-30831465 MS.gene03315:CDS
GACTTTGAAGTGGACATGAA+TGG 0.526515 6.2:-30832224 MS.gene03315:CDS
CAGAAAACTTCCTCCTAAAG+AGG 0.527440 6.2:-30837289 MS.gene03315:CDS
TATAGATGGTGTTGCGCCAA+GGG 0.530218 6.2:-30837940 MS.gene03315:intron
TGATGCGGTCGAAGAAGAAC+CGG 0.530602 6.2:-30838943 MS.gene03315:CDS
ATCTTATGCTCCCCTTCACC+GGG 0.530616 6.2:+30837022 None:intergenic
ATAAGTTTCCTATATGGCTC+AGG 0.531800 6.2:+30832383 None:intergenic
AAGCAAGAGGAGATACTGTT+GGG 0.532154 6.2:-30835115 MS.gene03315:CDS
GCTATCGACGATTTGGGTGA+TGG 0.532555 6.2:+30830456 None:intergenic
GTTTCCTATATGGCTCAGGC+AGG 0.532581 6.2:+30832387 None:intergenic
CCCTTTGCGTCTGATCTGAA+GGG 0.533829 6.2:-30832593 MS.gene03315:CDS
TTAAATTGGGAGAACCAGGC+TGG 0.534080 6.2:-30833661 MS.gene03315:CDS
TCTGAATATTTGGACTCTGA+GGG 0.534393 6.2:-30836364 MS.gene03315:CDS
GATGCAAATGTTCCCGGTGA+AGG 0.536350 6.2:-30837034 MS.gene03315:CDS
GACCTGAAGATGGGAGGACA+GGG 0.538748 6.2:+30831417 None:intergenic
CAGGTCCCCTATTGCAGGCA+TGG 0.538887 6.2:-30831400 MS.gene03315:CDS
AACACCTCCTCAAAAGAGGT+CGG 0.539477 6.2:+30838128 None:intergenic
GAAACTTTCCGGGTCGTGGG+GGG 0.540819 6.2:+30830201 None:intergenic
TACAGACAATGTCGTGTACT+CGG 0.540983 6.2:+30836956 None:intergenic
AAATGCTTGTGTGGTCAAAT+GGG 0.541246 6.2:-30836573 MS.gene03315:CDS
TGTATCGTTGTCTCCGCGGA+GGG 0.541313 6.2:-30829965 MS.gene03315:CDS
CCCTGGCTTTCAAATTGATG+GGG 0.542141 6.2:+30830380 None:intergenic
CTGGAAAGAGAGGTATTATG+AGG 0.542231 6.2:-30833642 MS.gene03315:CDS
TCCATCCTGATCAAGAAAGC+AGG 0.543181 6.2:+30829938 None:intergenic
GCCTGCTTTCTTGATCAGGA+TGG 0.543490 6.2:-30829939 MS.gene03315:CDS
GATGCTGATATGATTATGTT+GGG 0.545172 6.2:-30836793 MS.gene03315:CDS
CTATCTTCAGGATGAAAACA+TGG 0.545336 6.2:+30838813 None:intergenic
TTCTGGTCGGGAGCTTGGAG+AGG 0.545839 6.2:-30830683 MS.gene03315:CDS
CTCCCATTAGCTTCATGCCA+TGG 0.547362 6.2:+30830874 None:intergenic
AACATCAGCACGTTCAGAGT+TGG 0.547653 6.2:+30831770 None:intergenic
CGAGAGGAATTTGAGAGGGA+GGG 0.549293 6.2:-30837312 MS.gene03315:CDS
TGGCAAACGCAATACTTGGC+AGG 0.549310 6.2:-30832204 MS.gene03315:intron
CGACTTGAAAATAAAGCTGA+AGG 0.551149 6.2:-30834658 MS.gene03315:CDS
GATAGGCTATTGAAGAATCA+AGG 0.551651 6.2:-30837338 MS.gene03315:intron
TTTGTTTGAGATACTGAGCA+TGG 0.552208 6.2:+30830413 None:intergenic
AAGGTGTTTGTTCTTGGCAA+TGG 0.552821 6.2:-30833434 MS.gene03315:intron
AATACATCGAGGGTCTATGT+TGG 0.553120 6.2:-30833476 MS.gene03315:CDS
AAGAAACTTTCCGGGTCGTG+GGG 0.553982 6.2:+30830199 None:intergenic
TGTTGGCTTTCTATGGCCGT+AGG 0.554576 6.2:-30829856 MS.gene03315:CDS
GTGATGCATTATTACTATGA+AGG 0.554988 6.2:-30833453 MS.gene03315:CDS
TCAAATTGATGGGGCAATCG+AGG 0.555014 6.2:+30830389 None:intergenic
GGGAGGAGATACGACGAAAG+TGG 0.555361 6.2:-30830856 MS.gene03315:CDS
GTATAGATGGTGTTGCGCCA+AGG 0.557590 6.2:-30837941 MS.gene03315:intron
TCTACAGACTATGACAATTG+GGG 0.559139 6.2:-30830917 MS.gene03315:intron
GGCTGCAGACTGTGAAGGAA+AGG 0.559772 6.2:-30836544 MS.gene03315:CDS
GGTTGAACAATGATCCTGGT+TGG 0.559878 6.2:-30837176 MS.gene03315:CDS
CTATTTCAGGAAAACCCGAC+CGG 0.563405 6.2:-30830713 MS.gene03315:intron
ACCTTTATGTTACTCCAACC+AGG 0.564158 6.2:+30837162 None:intergenic
CTTCAAGATTTCTTTGAAGG+CGG 0.564485 6.2:+30836987 None:intergenic
CTAGTGTAGGCATGTGTGGT+AGG 0.564650 6.2:+30836235 None:intergenic
TTTGAGGATGCCGATGATGT+CGG 0.564801 6.2:+30830342 None:intergenic
GGATACGTGAACTGGAATAA+CGG 0.566030 6.2:+30830505 None:intergenic
GTTGCAGTTTCTAAATTCCA+CGG 0.566898 6.2:-30835068 MS.gene03315:CDS
GCAATAGGGGACCTGAAGAT+GGG 0.566930 6.2:+30831408 None:intergenic
AAACTTTCCGGGTCGTAGTG+GGG 0.566938 6.2:+30830244 None:intergenic
TAGCTGTCGTATCATCTCCA+TGG 0.567669 6.2:-30829777 MS.gene03315:CDS
AGAGACTCGGGTTGAACTTG+AGG 0.568442 6.2:+30835092 None:intergenic
CCTTCGATTTCGATGACGAC+CGG 0.570304 6.2:+30838924 None:intergenic
ACAAGCCATCTGTAAAAGGC+CGG 0.570801 6.2:+30838990 None:intergenic
AAACCCGATTCCGACATCAT+CGG 0.572004 6.2:-30830352 MS.gene03315:CDS
GCCCTTCAGATCAGACGCAA+AGG 0.572072 6.2:+30832592 None:intergenic
CAAGCAAGAGGAGATACTGT+TGG 0.572683 6.2:-30835116 MS.gene03315:CDS
AACTTGATTAACTTGCTGAT+GGG 0.573345 6.2:-30835995 MS.gene03315:CDS
ATCTCTAGTGTAGGCATGTG+TGG 0.573598 6.2:+30836231 None:intergenic
AAATGAACCAGCAACGGTCA+AGG 0.575308 6.2:-30837914 MS.gene03315:CDS
TGCTCAGCTATAATATCCGT+TGG 0.575702 6.2:+30829803 None:intergenic
GGAAATGAAGCAGCAAGCAA+AGG 0.576702 6.2:-30829488 MS.gene03315:CDS
CCGCATCAACGATAACCATC+GGG 0.577445 6.2:+30838958 None:intergenic
CGTCAGCAGTCACAAGCAAG+AGG 0.578680 6.2:-30835128 MS.gene03315:CDS
TAAAACCTGAACCTGTTCCA+TGG 0.582052 6.2:-30830891 MS.gene03315:CDS
GACCAGAAACGGATCCCGGT+CGG 0.584858 6.2:+30830698 None:intergenic
AAATGTTATGATGAGAGTTG+TGG 0.585051 6.2:-30830142 MS.gene03315:CDS
AGAAACTGCAACTAGAGACT+CGG 0.585347 6.2:+30835079 None:intergenic
TGTGCAACTAAAGTTTGGCT+TGG 0.585450 6.2:+30829422 None:intergenic
AGAAACTTTCCGGGTCGTGG+GGG 0.586136 6.2:+30830200 None:intergenic
GAAACTGCAACTAGAGACTC+GGG 0.589294 6.2:+30835080 None:intergenic
GATAACTTAGAAACTTTACT+GGG 0.589316 6.2:+30834954 None:intergenic
ACCGCATCAACGATAACCAT+CGG 0.591067 6.2:+30838957 None:intergenic
ACGAGAGGAATTTGAGAGGG+AGG 0.592042 6.2:-30837313 MS.gene03315:CDS
CTTCAGATCAGACGCAAAGG+GGG 0.592411 6.2:+30832595 None:intergenic
ATAGCAATAAACCTTGCAGC+AGG 0.593116 6.2:+30832497 None:intergenic
ACTTTCCGGGTCGTAGTGGG+GGG 0.595192 6.2:+30830246 None:intergenic
AAGCTAAGCTGGAAGAAGCA+AGG 0.595234 6.2:-30829555 MS.gene03315:CDS
GTTACGAGAGGAATTTGAGA+GGG 0.595252 6.2:-30837316 MS.gene03315:CDS
AAGGAACTTAAGGGAATGGG+TGG 0.595705 6.2:-30835962 MS.gene03315:CDS
TGCAAATGTTCCCGGTGAAG+GGG 0.598957 6.2:-30837032 MS.gene03315:CDS
ACTTGAAAATAAAGCTGAAG+GGG 0.599690 6.2:-30834656 MS.gene03315:CDS
TTGTGCGTCAGACTTTGAAG+TGG 0.600082 6.2:-30832234 MS.gene03315:intron
CATCTTCAAGGAACATCGAT+CGG 0.600343 6.2:+30829877 None:intergenic
TTTAGGGATACATGCAGTGG+TGG 0.601340 6.2:-30831474 MS.gene03315:intron
GCTTTGGCGGAGGATGACAA+CGG 0.601501 6.2:+30830628 None:intergenic
ACGTGAACTGGAATAACGGA+AGG 0.601885 6.2:+30830509 None:intergenic
GGACTTTGGAAGAGAAATTG+TGG 0.602408 6.2:+30830434 None:intergenic
AATGTTATGATGAGAGTTGT+GGG 0.604932 6.2:-30830141 MS.gene03315:CDS
GTGGCTGGGGATTAGGCCAA+CGG 0.608390 6.2:-30829819 MS.gene03315:CDS
TAAAAGGCCGGAACTCCCAT+CGG 0.608543 6.2:+30839002 None:intergenic
GAAAGCAGGCGGACCCTCCG+CGG 0.610035 6.2:+30829952 None:intergenic
TTCACGTATCCCTTAGCCAA+AGG 0.611767 6.2:-30830493 MS.gene03315:CDS
ATAGGCTGTTTAACATGGTG+CGG 0.611977 6.2:-30838082 MS.gene03315:CDS
AAGCAATGAAGCTTTCAAAG+AGG 0.612694 6.2:-30829509 MS.gene03315:CDS
GACTTGAAAATAAAGCTGAA+GGG 0.612878 6.2:-30834657 MS.gene03315:CDS
GAGAACCAGGCTGGAAAGAG+AGG 0.613044 6.2:-30833652 MS.gene03315:CDS
TTCAGAAACTTAACTCCATG+TGG 0.614031 6.2:+30831127 None:intergenic
GGAGATACGACGAAAGTGGA+AGG 0.614103 6.2:-30830852 MS.gene03315:intron
CAACTCAAAAGGTGGTCATG+AGG 0.614389 6.2:-30834607 MS.gene03315:CDS
TATTTCAGGAAAACCCGACC+GGG 0.615329 6.2:-30830712 MS.gene03315:intron
CATATAGCTCGACCACCACA+TGG 0.615763 6.2:-30831142 MS.gene03315:CDS
GGTTACATATCCTTATGTAG+TGG 0.616997 6.2:-30831444 MS.gene03315:CDS
ATAAAAGTCAATAATTGGCG+AGG 0.617724 6.2:+30832349 None:intergenic
GTACTAATGCACGCAGAGAG+AGG 0.618416 6.2:+30831819 None:intergenic
GGGCTAAAATGAACCAGCAA+CGG 0.623053 6.2:-30837920 MS.gene03315:CDS
ACATCGATCGGTATCCAGCA+AGG 0.624765 6.2:+30829889 None:intergenic
GTGTATCGTTGTCTCCGCGG+AGG 0.625580 6.2:-30829966 MS.gene03315:CDS
GGTTACGAGAGGAATTTGAG+AGG 0.625714 6.2:-30837317 MS.gene03315:CDS
AAAAGGTGGTCATGAGGACA+AGG 0.625945 6.2:-30834601 MS.gene03315:intron
TTTCCTATATGGCTCAGGCA+GGG 0.626770 6.2:+30832388 None:intergenic
CCCGATGGTTATCGTTGATG+CGG 0.627275 6.2:-30838958 MS.gene03315:CDS
GTTGCCGATTCCTCTTTAGG+AGG 0.629901 6.2:+30837279 None:intergenic
TAGGTGTATCGTTGTCTCCG+CGG 0.634090 6.2:-30829969 MS.gene03315:CDS
TTATTTAGGGATACATGCAG+TGG 0.637311 6.2:-30831477 MS.gene03315:intron
TAGGTCTTAAAATACATCGA+GGG 0.638324 6.2:-30833486 MS.gene03315:CDS
TGCTAAAGATGCATCTGATG+CGG 0.639455 6.2:-30837880 MS.gene03315:intron
AACCATACAAGCAAACTGCA+CGG 0.640778 6.2:+30830102 None:intergenic
CCTTCAGATCAGACGCAAAG+GGG 0.642471 6.2:+30832594 None:intergenic
TCAGTAGCAACATGAGTATG+GGG 0.643252 6.2:+30830022 None:intergenic
TCAAAATCGATCTCAAAAGG+AGG 0.644702 6.2:+30836309 None:intergenic
ACCTCACGAATCTCTAGTGT+AGG 0.645633 6.2:+30836222 None:intergenic
CCGGTCGTCATCGAAATCGA+AGG 0.645716 6.2:-30838924 MS.gene03315:CDS
TTTATAGCTCCAGCTAACGG+TGG 0.648913 6.2:-30835162 MS.gene03315:intron
ATGGGTGGATATTTGACAAG+CGG 0.650927 6.2:-30835947 MS.gene03315:CDS
TGAAGAATCAAGGTTACGAG+AGG 0.653348 6.2:-30837328 MS.gene03315:CDS
ATCCTGATCAAGAAAGCAGG+CGG 0.660754 6.2:+30829941 None:intergenic
CATATGGCTGCAGACTGTGA+AGG 0.664189 6.2:-30836549 MS.gene03315:CDS
GGTCAAGACAAATGCTTGTG+TGG 0.667679 6.2:-30836582 MS.gene03315:CDS
CTGAATCAAGACGAGAACCG+TGG 0.670349 6.2:+30835051 None:intergenic
GATGTGTTCAACTCAAAAGG+TGG 0.676030 6.2:-30834615 MS.gene03315:CDS
ACGATACACCTAAAGCGTTG+AGG 0.682803 6.2:+30829980 None:intergenic
GCTGATGGGAGCATACAAGA+AGG 0.687619 6.2:-30835981 MS.gene03315:CDS
ATAGGGGACCTGAAGATGGG+AGG 0.687790 6.2:+30831411 None:intergenic
GCTTGTGGAGAAATACCCGA+TGG 0.688991 6.2:-30838973 MS.gene03315:CDS
ACCTCCTCAAAAGAGGTCGG+GGG 0.689067 6.2:+30838131 None:intergenic
TTAGGTCTTAAAATACATCG+AGG 0.693004 6.2:-30833487 MS.gene03315:intron
TGTGCGTTTCATCTTCGACG+AGG 0.694106 6.2:+30830606 None:intergenic
AGAAACTTAACTCCATGTGG+TGG 0.696063 6.2:+30831130 None:intergenic
CGTGAACTGGAATAACGGAA+GGG 0.697061 6.2:+30830510 None:intergenic
CATGGCATGAAGCTAATGGG+AGG 0.699584 6.2:-30830873 MS.gene03315:CDS
TGAACCAGCAACGGTCAAGG+CGG 0.706128 6.2:-30837911 MS.gene03315:CDS
TTTGGCGGAGGATGACGACG+AGG 0.709591 6.2:+30830534 None:intergenic
TTTGCGTTTCATCTTCAACG+AGG 0.710266 6.2:+30830558 None:intergenic
AGTTAATATTAAGCTCACCA+AGG 0.711240 6.2:+30832570 None:intergenic
TTTGGCGGAGGATGACAACG+GGG 0.715338 6.2:+30830630 None:intergenic
TTTGCGTTTCATCTTCAACG+AGG 0.719849 6.2:+30830582 None:intergenic
GCAATAAAGAAGTCTCTGAG+AGG 0.722212 6.2:-30834977 MS.gene03315:CDS
TGTGCACCAACCTTTCAACA+GGG 0.730103 6.2:+30831733 None:intergenic
GCCTACACTAGAGATTCGTG+AGG 0.743826 6.2:-30836223 MS.gene03315:intron
ATGTTATGATGAGAGTTGTG+GGG 0.749512 6.2:-30830140 MS.gene03315:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr6.2 gene 30829429 30839021 30829429 ID=MS.gene03315
chr6.2 mRNA 30829429 30839021 30829429 ID=MS.gene03315.t1;Parent=MS.gene03315
chr6.2 exon 30838779 30839021 30838779 ID=MS.gene03315.t1.exon1;Parent=MS.gene03315.t1
chr6.2 CDS 30838779 30839021 30838779 ID=cds.MS.gene03315.t1;Parent=MS.gene03315.t1
chr6.2 exon 30838054 30838156 30838054 ID=MS.gene03315.t1.exon2;Parent=MS.gene03315.t1
chr6.2 CDS 30838054 30838156 30838054 ID=cds.MS.gene03315.t1;Parent=MS.gene03315.t1
chr6.2 exon 30837881 30837957 30837881 ID=MS.gene03315.t1.exon3;Parent=MS.gene03315.t1
chr6.2 CDS 30837881 30837957 30837881 ID=cds.MS.gene03315.t1;Parent=MS.gene03315.t1
chr6.2 exon 30837164 30837355 30837164 ID=MS.gene03315.t1.exon4;Parent=MS.gene03315.t1
chr6.2 CDS 30837164 30837355 30837164 ID=cds.MS.gene03315.t1;Parent=MS.gene03315.t1
chr6.2 exon 30836949 30837068 30836949 ID=MS.gene03315.t1.exon5;Parent=MS.gene03315.t1
chr6.2 CDS 30836949 30837068 30836949 ID=cds.MS.gene03315.t1;Parent=MS.gene03315.t1
chr6.2 exon 30836753 30836815 30836753 ID=MS.gene03315.t1.exon6;Parent=MS.gene03315.t1
chr6.2 CDS 30836753 30836815 30836753 ID=cds.MS.gene03315.t1;Parent=MS.gene03315.t1
chr6.2 exon 30836479 30836619 30836479 ID=MS.gene03315.t1.exon7;Parent=MS.gene03315.t1
chr6.2 CDS 30836479 30836619 30836479 ID=cds.MS.gene03315.t1;Parent=MS.gene03315.t1
chr6.2 exon 30836224 30836388 30836224 ID=MS.gene03315.t1.exon8;Parent=MS.gene03315.t1
chr6.2 CDS 30836224 30836388 30836224 ID=cds.MS.gene03315.t1;Parent=MS.gene03315.t1
chr6.2 exon 30835940 30836026 30835940 ID=MS.gene03315.t1.exon9;Parent=MS.gene03315.t1
chr6.2 CDS 30835940 30836026 30835940 ID=cds.MS.gene03315.t1;Parent=MS.gene03315.t1
chr6.2 exon 30835741 30835827 30835741 ID=MS.gene03315.t1.exon10;Parent=MS.gene03315.t1
chr6.2 CDS 30835741 30835827 30835741 ID=cds.MS.gene03315.t1;Parent=MS.gene03315.t1
chr6.2 exon 30834896 30835171 30834896 ID=MS.gene03315.t1.exon11;Parent=MS.gene03315.t1
chr6.2 CDS 30834896 30835171 30834896 ID=cds.MS.gene03315.t1;Parent=MS.gene03315.t1
chr6.2 exon 30834602 30834697 30834602 ID=MS.gene03315.t1.exon12;Parent=MS.gene03315.t1
chr6.2 CDS 30834602 30834697 30834602 ID=cds.MS.gene03315.t1;Parent=MS.gene03315.t1
chr6.2 exon 30833589 30833684 30833589 ID=MS.gene03315.t1.exon13;Parent=MS.gene03315.t1
chr6.2 CDS 30833589 30833684 30833589 ID=cds.MS.gene03315.t1;Parent=MS.gene03315.t1
chr6.2 exon 30833435 30833505 30833435 ID=MS.gene03315.t1.exon14;Parent=MS.gene03315.t1
chr6.2 CDS 30833435 30833505 30833435 ID=cds.MS.gene03315.t1;Parent=MS.gene03315.t1
chr6.2 exon 30832509 30832637 30832509 ID=MS.gene03315.t1.exon15;Parent=MS.gene03315.t1
chr6.2 CDS 30832509 30832637 30832509 ID=cds.MS.gene03315.t1;Parent=MS.gene03315.t1
chr6.2 exon 30832342 30832418 30832342 ID=MS.gene03315.t1.exon16;Parent=MS.gene03315.t1
chr6.2 CDS 30832342 30832418 30832342 ID=cds.MS.gene03315.t1;Parent=MS.gene03315.t1
chr6.2 exon 30832205 30832245 30832205 ID=MS.gene03315.t1.exon17;Parent=MS.gene03315.t1
chr6.2 CDS 30832205 30832245 30832205 ID=cds.MS.gene03315.t1;Parent=MS.gene03315.t1
chr6.2 exon 30832048 30832122 30832048 ID=MS.gene03315.t1.exon18;Parent=MS.gene03315.t1
chr6.2 CDS 30832048 30832122 30832048 ID=cds.MS.gene03315.t1;Parent=MS.gene03315.t1
chr6.2 exon 30831744 30831901 30831744 ID=MS.gene03315.t1.exon19;Parent=MS.gene03315.t1
chr6.2 CDS 30831744 30831901 30831744 ID=cds.MS.gene03315.t1;Parent=MS.gene03315.t1
chr6.2 exon 30831375 30831491 30831375 ID=MS.gene03315.t1.exon20;Parent=MS.gene03315.t1
chr6.2 CDS 30831375 30831491 30831375 ID=cds.MS.gene03315.t1;Parent=MS.gene03315.t1
chr6.2 exon 30831123 30831198 30831123 ID=MS.gene03315.t1.exon21;Parent=MS.gene03315.t1
chr6.2 CDS 30831123 30831198 30831123 ID=cds.MS.gene03315.t1;Parent=MS.gene03315.t1
chr6.2 exon 30830853 30830932 30830853 ID=MS.gene03315.t1.exon22;Parent=MS.gene03315.t1
chr6.2 CDS 30830853 30830932 30830853 ID=cds.MS.gene03315.t1;Parent=MS.gene03315.t1
chr6.2 exon 30829653 30830726 30829653 ID=MS.gene03315.t1.exon23;Parent=MS.gene03315.t1
chr6.2 CDS 30829653 30830726 30829653 ID=cds.MS.gene03315.t1;Parent=MS.gene03315.t1
chr6.2 exon 30829429 30829594 30829429 ID=MS.gene03315.t1.exon24;Parent=MS.gene03315.t1
chr6.2 CDS 30829429 30829594 30829429 ID=cds.MS.gene03315.t1;Parent=MS.gene03315.t1
Gene Sequence

>MS.gene03315

ATGGGAGTTCCGGCCTTTTACAGATGGCTTGTGGAGAAATACCCGATGGTTATCGTTGATGCGGTCGAAGAAGAACCGGTCGTCATCGAAATCGAAGGCGTGCAGATTCCGATAGACACTAGCAAACCCAACCCTAATAATCTTGAATATGATAACCTCTATCTCGACATGAATGATATCATTCATCCATGTTTTCATCCTGAAGATAGGGTAATTTTCTTTTTTTTTTTTTTACTCTTTCACGTTATTATTATGAATTCATTTTTTTATTTAATTATCATAATTGTTGTTTTTTTTATTGGATTCAGAGAAATGTTAATGATTTTGAGTTATTTGATTATGATTTTAATCGCTGTTATTATTATTGGATTCGAAGAAATGTGGATGCTTTTGAGTTATTTGGATTATTATTATTTTTGAATTAACCATCAATTTAATCCCTGAAGTATATATTAACATTCATCAATTTAGTCCCTGATATCTTAATAGCAATGACTGAATCGATGGATTTTATAAGAACGACTTATTATATACACATACATAGTTTTTATAGAAAAAACTGAAAAAGATAAAATGAAGGTAAATTGTTTTTGTCTATGCTATAAGCTGTTTCTATACACTGTATTGAAGAACTTATGAATAGAAGCCAAAGAAAGCTTGTGAAAATAGCGAGAAGTTGTTTTCATAAGTTCTCCTAAAGTCTCAAAACTCATGCCAGTAGATAAGCTCAAATAAGCCAATACAAACAGGCCCTAAATTGAAGTGAGTGTGATAGTTTAGGGACTAAATTGATGCTTTATTCTTATTCTTAATGTTGTTCTTGGATTTGGAGAAGCGTGAATGATTTGGTGTTATTTGATTGCAGCCACCCCCGACCTCTTTTGAGGAGGTGTTTGAGTGCATGTTTGATTACATTGATAGGCTGTTTAACATGGTGCGGCCTAGGAAGCTTCTCTTTATGGCTATTGGTTTGTCTTCTATCTTTGTTCTCTGGTTGTTTGTTTTCATGGTTTTTTTTGGTTGTTGGTGACGCTTAATTGATTTTTCGGTTTTAAATTGTATAGATGGTGTTGCGCCAAGGGCTAAAATGAACCAGCAACGGTCAAGGCGGTTTAGAGCTGCTAAAGATGCATCTGATGCGGTATGTTGTAATGAGTTTTTTCATTCTTTTTGATTTTGTGATTTATTGGAGAATTTAATATTTCATGTGTAGCGGTTTCAATTAACTATATATAGACCAATGCTGCACATTGGTCTGATTGCTTATGAGTTTATTGAAATATACAAAACTCTGCTATTGGGTATTTTCCTGCTTCATTTTTATGTCGGTTTCATAGTCTTGATGTTATTGTTGTGTTAAATATAGGCCCTATAGTGTAGCGAAATTTTAACAAACTTCTATTGCTAAGAAAATATAGGCACTATAGTGTAGCGAATTTTTGACAAACTGCTATTGGTCAAAAAATATAGGCACTATAGTGTAGCGAAATTTTAACCAACTGCTATTACTCAGCAATAAGCGATTTAGTATCAAGTGTTGCCAAATAGTAGTTTTAGTGCTAAGTGATACATGTTCAACTTTAATCTCACTGGGAAAATAATGAAATATTTTGCTAAAGCGTAAGTTTGATTCACTTTTTTTGACTGTTGTTCTCTTGTGTGATAGGCTATTGAAGAATCAAGGTTACGAGAGGAATTTGAGAGGGAGGGCAGAAAACTTCCTCCTAAAGAGGAATCGGCAACTTTTGATTCAAATGTCATCACACCTGGAACTGAATTCATGGCTGCTCTGTCAATTGCACTACAATACTATATTCATCTTAGGTTGAACAATGATCCTGGTTGGAGTAACATAAAGGTAAGTTCATTATAATGTTATCTAAATTTTGTATGGCTGCAGTATGTGTGTCTCAGTGGAGTGTATAATACTGTGATTTTTGTGTATATCTGAAGGTTATTCTTTCTGATGCAAATGTTCCCGGTGAAGGGGAGCATAAGATTATGTCCTATATCCGCCTTCAAAGAAATCTTGAAGGATTCAATCCGAGTACACGACATTGTCTGTATGGTTTGGTATATATCAATCTTCCAATATTTTGCTACTCTTGGAAAGCAACTTCTTCTTGATATTCACTCTATGTCTTCAATGCATTATCTATCTTGGACTTGATCAAACTGTTGATATCATTTTGTTGTTTTATGACAGGATGCTGATATGATTATGTTGGGTCTGGCTACCCATGAAGTCCATTTTTCAATTCTTAGAGAGGTTTGTGTACTAAAATTAGCTTCTGAGTCTCTGAATTAGTGCATTTCAGCATTGTAAAACAATTACATCATTAGCCATTTTCTGTCAGACTTTCCTAGGGATTAACACATTGGTCAATAATGGGTTATTTCAGGTTGTATTTACTCCTGGTCAAGACAAATGCTTGTGTGGTCAAATGGGTCATATGGCTGCAGACTGTGAAGGAAAGGCTAAAAGGAAGTCAGGAGAATTTGATGAAAAAGGAGATGCTATTGTTGCTAAAAAGCCTTTCCAGGTCAGGGTTTGAGATAAATTTTGAAATTCACAATGAAATAATGACGGGGCTTTGGGATTTACTTCTTACTTCTGCATGTTTCGTTTGTAGTTTCTGAATATTTGGACTCTGAGGGAATGTCTGGAGTATGAGATGAAAATACCTAATCCTCCTTTTGAGATCGATTTTGAATGCATATTGGATGATTTTATCTTCATTTGCTTTTTCGTTGGCAATGATTTCCTACCACACATGCCTACACTAGAGATTCGTGAGGTAAGGGTTGTATTTTATTGGCAATAATTTGCAGATTGTCCTTAACGAGAGTACATAGTCTTCAAGTATACAGGAGTAGTTGTTTTTGATACTTAAGGAATTATGATACCGGTCTTTTATTATCTGAAATGCACATTTTTATGCCGGTAAGGTTATGCAACTGATACAATTTTTTGAACTTACATTATTTTTTATAGGGTGCGATGAACTTGATTAACTTGCTGATGGGAGCATACAAGAAGGAACTTAAGGGAATGGGTGGATATTTGACAAGCGGTAGTAAGGTACTTTCTTGATAGTAACAATGGTGATGATTGGCATATTTGTAGTATCTGTGTCGTTTCCATCTAAATCAAGCTTGTGTGTATAATGTTTCTTTTCCCCTTCTTTTCTCAGCCAAATTTGAGCAGAGTCGAGCATTTTATTCAGGCTGTTGGATCATACGAAGATAGCATATTCCAAAAACGAGCTCGAACGCAACAGGTATGTTGATCTAGGATAACTATATCATTATATATTAGCCAGCAGTATGATTTGGTCGTTGGTCAAGAACTGTAAATATCATTTATTATGTATTAGTTATATGTTGTGGCTGATCTTGAAATAGTTGGAGGAAACAATGATGAGTATTCGGTATGCTGGCATAGTTGTCTTAATCTATGATTATGGGTGATTAGTTGTATATTTTTCATGCATTTTGTATTTTAACACTAATCATGGTTCATAATGGATTTGTTATTTTCTTTTACCTTCGTATCTAGTTGCATCTTTTCCCCAATGAAAACAAGGTAGAGAGAGATCACCAGTCTATGTCCAATATCTGTGCCGTATTTATGCTGTACCTTTGTGCTGGAAAATGGGTGCTAATTGCTTAATTTTTCTCACAATTTCTATCCATGTATTTTTGTATATGAACTGAAGGGAATGTGAGCGGTCAAAGAAAGTTCATATCTTGCCGTATAGTTTTTCATGTTCATAGCAATAGCTGTTTGACTGCTTGCTCTGAAGTGATTCCTCCTATGTGTTTTTACTTTTTTTTTTTATAGCTCCAGCTAACGGTGGAAAGAATAAAGCGTCAGCAGTCACAAGCAAGAGGAGATACTGTTGGGCCTCAAGTTCAACCCGAGTCTCTAGTTGCAGTTTCTAAATTCCACGGTTCTCGTCTTGATTCAGCTCCAACGCCTGCACCATTTCAACAATCTGGGCCCACCTCAGTTAAAAAAGGCAATAAAGAAGTCTCTGAGAGGCCCAGTAAAGTTTCTAAGTTATCTTCGGGAGCAACTGTTGCTGCTTCAATTGTTGAAGCCGAGAATAGTCTTGAAATAGATGTATGTTATTCTACTTCAGGAGAGGCATTCTTTAGATAGAACTAATATATAAGCTAAGCTTTTACTGGATTATGAGTCTGGGAGAGTTAAAAAAACATTTTAATAGCTTGTTAAATAATTGTTTTTCTAAGAGTTCTACTTTGAGCTGGTGATTTCTATGTACTTCTTCTTGAAGTTTAGTATTCTTCTGCTCTACAGGTTGAAGATAACAAAGACGACTTGAAAATAAAGCTGAAGGGGATACTTCGTGACAAATCTGATGTGTTCAACTCAAAAGGTGGTCATGAGGACAAGGTAAAGCATAGAACACATATAATTGTGTCTGGAATTTTGAACTTCATTGATGGTCGAAGTAGGTATTTATTGAATAAATGGCATGTAAATTATCCTGCGTAAGGAAGGATATATATTAGGTGAAATTTTTTCCAAGTCCTATAAAAGAAAATTTAAAAAAATTCAAATGATTTGATTAAACATCTATTTTTTATACAATATATGTAATTTTCCCTGCAATATGGGCTGGGTTGATATTATTCCCCGCTTTTAATGTTTTCTGGTGAGTATTTGACCCTTCATTGTAGAAAAACATTTAATCAAAATCTTTAGAACTCAACCAAAGCTTTTGAAATTTATAGTTTACTGAGTGACAGATATGGGGGTTCTTTAGTTGCAAATAATTGCTTTTGAAGTTGAAGCATCAGCTTTGAAGGATTATCCATTTGTAACTATTATCAAATATTGATTAGACATGTATTTTGATTTTTTAATGACAAATCAATGTGGTCCTAGTTGTTTGTAGCAACGACAAGGCAAATTTCAAGTGGTTCAATCAACCTCTTGGCCACATAAGGGGCCTAGCCATTCCCATGATGGGAAAAGCTTACCAGATCAAACTTCCCCCCTCTGTGTGTATTGGGTGTGGGATATTGATGAATGCCTGATTTTAGTATATACAGGTGTTCGGCTACTGTGAGTTATGATTAACAACCTAGACCTTTCTCTGTCTTGGCCATATGCTACAAGCCTACACAATGACTGGGATTGCCGCCTTAATTTGCAATTGAAATATGCAACATAACATTTTAAAGTGTTTCTGGATTATGACATTAGCTCGATACTTTGAAAAGCATAATATGTCATAAATGTAATGATTTCCTATATCTCGATTATTGATTTTCGTTCATTGTAGTTAATAGTTTTTGTTTTAACAGATTAAATTGGGAGAACCAGGCTGGAAAGAGAGGTATTATGAGGAAAAATTTTCTGCTCAGACTCCCGAGGAACTTGATGCTATAAGGAAAGATGTTGTAAGTTGGGAAATTGAAGTTTTATTAGTTTGGTTTTGATTCATGTGAAGATCTGGGTTTTCTTATTGTGATTTATTGTTTAGGTCTTAAAATACATCGAGGGTCTATGTTGGGTGATGCATTATTACTATGAAGGTGTTTGTTCTTGGCAATGGTAAGTTCTTTTTCTAATTTTCTCTGGAATGTTGTATGAATCTTAAGTTGTGTTGGCTTTCCTTTTCTTTTTATACGGTACTTGTTGTACTTTCCACCTTCCTCACCATGATGAGAAACTGCGATAACCAAATTTTGTCTTTTGTTGGATAGAAATTTATTAGGTGATGAGTAGTGCATGCTCTTCCCCCAAAAAATAGTAGTGCGTGCTTTGAACATGTTCCTGACTTGTTTTACCATTGTTCTACTGATATTTCTTTGTAGATCCTGTGTGGTATATGATATTCTTAGTGGAATGTTGTGTGTCATACTCAAGCACAGACACCTTTGATCAAAAGCGTGTCCGGTGTCCGACACGACACCGACCCATGTCCGAAATAAAAAAGGCCAACACTTGGCTACAATTTCATGTTTGGTTAGTTCATAACTCTCTTAAGGAGGTTTCTTTAGTAATCAGAGTTGATTTAAGATCTGTCATGAAGAGGTTTGTTTAGTATAGGCTTCTCAATCATGTTTTGAACGACAACCCTGTTGAGATTGTGAATCTTCGGTTGTACCATTGATTGTCTCTTTCTTTGTCAAGGACGATTTGTTATCCTCCTTTCCCATTGCAAGTTATCATGGTTCCATTGAATTAATTCTTTTATGGGGAAAATGAGAGATAAGGAGTGTTTTTCCTTTATACTTTCATTGCCTTTGATATTTTATATTTTAGTGATCCATAGTGCATACACATTATTAGTTGCTTGCAGTATGTTTGTTATTTTTCTTATTTTCTGATTCCTTGTTATGAAACAGGTTTTATCCTTATCATTATGCCCCCTTTGCGTCTGATCTGAAGGGCCTTGGTGAGCTTAATATTAACTTTGAGTTGGGTACTCCATTCAAACCATTTGATCAGCTTCTTGGAGTTTTACCTGCTGCAAGGTTTATTGCTATCCCATTTTTTCCGTTAAAGTTGTAACTTAAAACTAAACTTGAAGTTTCTGTAACGTTGAAAATATGATTTATCTGCAGCTCTCATGCCCTGCCTGAGCCATATAGGAAACTTATGACTGATCCAACCTCGCCAATTATTGACTTTTATCCAATAGGTATGTCTATAATACAGTGTACACTGAATAAGTTTTAGAAGTTTCATTGAATTATCGTTATCGCTCCTTTATGTAATATTTGATGTTGTGCGTCAGACTTTGAAGTGGACATGAATGGCAAACGCAATACTTGGCAGGTTCGCCTCCTCGTTACATCTGCTCTTATCTCTGTGTTTTCCAACATGACAGCAACATTGTAATAAAATCCTTCCTTTTTAGGGTATTGCGAAGTTGCCTTTTATTGATGAAGTGCGTCTTCTTCAGGAAGTTCAGAAAGTAGAAAACTTGTTAACAGTAAGCTCATTCCTTCATTAAGTTTTATCAACACTTGTTCACTTCAGTTCATTGTTCTCAATTCCTTCCCCTCCTGTTCACACCCCCTTATCATAGACTGATTTAGTTATATTTTGTTTTCCTATGTCTATTCAAAAAACTAATAGCCAGAGGAAAAGCGACGAAATGCAATAATGTTTGAGATGCTTTTTGTGAATTCATGTCATCCTCTCTCTGCGTGCATTAGTACACTCGACAACAAATGTAGAAACATGTCCAACTCTGAACGTGCTGATGTTAAGGAAAAAATAGACCCTGTTGAAAGGTTGGTGCACAGCTTTTTAATTTTTTGAACTTGCTTTTTGGATGAGAAAGATTTAAATTAATATGCTTATAATCATAATGGCGAGGTAAAAAAAAAAAAACAATTGTTTTGAAACTTATGAATTATGATGGTGTATTGTTTTTTTTCAAACCAAGGACAAAGCAAAAGGACAAGTTGTATGCATCACATTATTTTGTTTGCATCATATGTTCGATTTAAGATCTTGCTCGACTACTTTCTGATGTTATTTAGGGATACATGCAGTGGTGGAATGAATGGTTACATATCCTTATGTAGTGGAGAACCCTGTCCTCCCATCTTCAGGTCCCCTATTGCAGGCATGGAAGACATCATGGATAATCATGTCATGTAAGTTTGCCAATGATGAGTATATAATAAAAGCATTATTTATGATCACAGATCTGACGAGGAATCCTAGCAGAACTTTTCTGCACACACCCTTTACGTTTGCTTCATTTTTTTATTTTTTTTTGAAATAACACTAAAGTGATGTTATGTTTCTTATTTGCTGCATTGGTGCTCAGATGTGCAATATATAGACTTCCAGATGCACATGAACATATAGCTCGACCACCACATGGAGTTAAGTTTCTGAAGAATGTATTAAATTTTCTACCTGCTGCTTATTAATAGTGCTCTAACTTCCTCTCCCTGGTTTCTCTTCTCGGGTTCCAGTGGTTTAATTAGCAAGACCATACTGTGTTCTACCTAGAATGTTATAGTGTTTCATCTGTTCATATACTGTCAATATTGCTGAAAAAATAAATAAATTCATGCTCCTTTTCTACAGACTATGACAATTGGGGATCTAAAACCTGAACCTGTTCCATGGCATGAAGCTAATGGGAGGAGATACGACGAAAGTGGAAGGTAGGACTTTCGTTTATTTGTGCTAAAAGACTTGAAGTTAAATTTGTTATTTACCATTGAACAGCATGGAGTATCTTGTCATCCTGCTGATCAAAATTGTTAATGGGGCTCGGTTTTCTATTTCAGGAAAACCCGACCGGGATCCGTTTCTGGTCGGGAGCTTGGAGAGGCAGCACACAGCTCGAAGATGAAACGCAGAGCCCCGTTGTCATCCTCCGCCAAAGCCTCGTCGAAGATGAAACGCACAGCCTCGTTGAAGATGAAACGCAAAGCCTCGTTGAAGATGAAACGCAAAGCCTCGTCGTCATCCTCCGCCAAAGCCCTTCCGTTATTCCAGTTCACGTATCCCTTAGCCAAAGGCACGAAGCCCTACACCATCACCCAAATCGTCGATAGCCACAATTTCTCTTCCAAAGTCCATGCTCAGTATCTCAAACAAACCCTCGATTGCCCCATCAATTTGAAAGCCAGGGAAATCAAACCCGATTCCGACATCATCGGCATCCTCAAAAGCTCCAAAACCCTAAAGTCCAAAACCCTAAGCCAACTCCCTCCCCCCTCCAACTCCCTCCAACTCCCTCCCTCCCCCCACTACGACCCGGAAAGTTTCTTCTCTTTGGGGTTGACGCCCCCCCACGACCCGGAAAGTTTCTTCTCTTTGGGGTTGACGCCGGTGAATGGGAATTTGAAATGTTATGATGAGAGTTGTGGGGCTGTGATAGATTGTTCCGTGCAGTTTGCTTGTATGGTTATTCCCCAACTTGTTACGAAAATGGTCGCTGATGATGCGCTCTTCATTCTCTTGGTGCCCCATACTCATGTTGCTACTGAATTGGCTCGCTATTGTTTTCCTCAACGCTTTAGGTGTATCGTTGTCTCCGCGGAGGGTCCGCCTGCTTTCTTGATCAGGATGGAGAAGAAATTGAAACTGCCTGTTTTAGCCTTGCTGGATACCGATCGATGTTCCTTGAAGATGTTGGCTTTCTATGGCCGTAGGTTGAAAAATTTCAAGTGGCTGGGGATTAGGCCAACGGATATTATAGCTGAGCATAATAGCTGTCGTATCATCTCCATGGATAGTAAGGATATTGAGACTGCCAAAGATATATTAAATGATAATTATTTCAAAACTCGTCCAAAATGGATTGACGAATTGCATATTATGCTCAAGAATAAGCAAAAGATTGCCATTGAGTCGCTGTGCTTATCCGGGGTAAGATCGTACTTGACAACTGTGTTTTTGCCAATGAAACTGCAGCTTGAAGATTGGATTTGAAGCTAAGCTGGAAGAAGCAAGGATTAGAGAAGAAAATCTGAACAGAAGCAATGAAGCTTTCAAAGAGGAAATGAAGCAGCAAGCAAAGGCTACAAACAAGATGCTAAAAGAGATGATGGAGATGTTCCAAAACCAAGCCAAACTTTAG
Protein sequence

>MS.gene03315.t1

MGVPAFYRWLVEKYPMVIVDAVEEEPVVIEIEGVQIPIDTSKPNPNNLEYDNLYLDMNDIIHPCFHPEDRVIFFFFFLLFHPPPTSFEEVFECMFDYIDRLFNMVRPRKLLFMAIDGVAPRAKMNQQRSRRFRAAKDASDAAIEESRLREEFEREGRKLPPKEESATFDSNVITPGTEFMAALSIALQYYIHLRLNNDPGWSNIKVILSDANVPGEGEHKIMSYIRLQRNLEGFNPSTRHCLYGLDADMIMLGLATHEVHFSILREVVFTPGQDKCLCGQMGHMAADCEGKAKRKSGEFDEKGDAIVAKKPFQFLNIWTLRECLEYEMKIPNPPFEIDFECILDDFIFICFFVGNDFLPHMPTLEIREGAMNLINLLMGAYKKELKGMGGYLTSGSKPNLSRVEHFIQAVGSYEDSIFQKRARTQQLTVERIKRQQSQARGDTVGPQVQPESLVAVSKFHGSRLDSAPTPAPFQQSGPTSVKKGNKEVSERPSKVSKLSSGATVAASIVEAENSLEIDVEDNKDDLKIKLKGILRDKSDVFNSKGGHEDKIKLGEPGWKERYYEEKFSAQTPEELDAIRKDVVLKYIEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKGLGELNINFELGTPFKPFDQLLGVLPAASSHALPEPYRKLMTDPTSPIIDFYPIDFEVDMNGKRNTWQGIAKLPFIDEVRLLQEVQKVENLLTPEEKRRNAIMFEMLFVNSCHPLSACISTLDNKCRNMSNSERADVKEKIDPVERDTCSGGMNGYISLCSGEPCPPIFRSPIAGMEDIMDNHVICAIYRLPDAHEHIARPPHGVKFLKNTMTIGDLKPEPVPWHEANGRRYDESGRKTRPGSVSGRELGEAAHSSKMKRRAPLSSSAKASSKMKRTASLKMKRKASLKMKRKASSSSSAKALPLFQFTYPLAKGTKPYTITQIVDSHNFSSKVHAQYLKQTLDCPINLKAREIKPDSDIIGILKSSKTLKSKTLSQLPPPSNSLQLPPSPHYDPESFFSLGLTPPHDPESFFSLGLTPVNGNLKCYDESCGAVIDCSVQFACMVIPQLVTKMVADDALFILLVPHTHVATELARYCFPQRFRCIVVSAEGPPAFLIRMEKKLKLPVLALLDTDRCSLKMLAFYGRRLKNFKWLGIRPTDIIAEHNSCRIISMDSKDIETAKDILNDNYFKTRPKWIDELHIMLKNKQKIAIESLLKIGFEAKLEEARIREENLNRSNEAFKEEMKQQAKATNKMLKEMMEMFQNQAKL