Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024874.t1 | PNX93638.1 | 81.4 | 306 | 56 | 1 | 1 | 306 | 1 | 305 | 1.90E-139 | 505.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024874.t1 | A6LS61 | 33.9 | 271 | 137 | 8 | 9 | 276 | 3 | 234 | 2.5e-31 | 137.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024874.t1 | A0A2K3MS27 | 81.4 | 306 | 56 | 1 | 1 | 306 | 1 | 305 | 1.4e-139 | 505.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene024874 | MS.gene051956 | PPI |
| MS.gene024874 | MS.gene85230 | PPI |
| MS.gene76157 | MS.gene024874 | PPI |
| MS.gene024874 | MS.gene057003 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024874.t1 | MTR_5g006290 | 78.896 | 308 | 62 | 2 | 1 | 306 | 1 | 307 | 0.0 | 503 |
| MS.gene024874.t1 | MTR_5g006300 | 90.945 | 254 | 11 | 2 | 2 | 249 | 3 | 250 | 1.92e-168 | 469 |
| MS.gene024874.t1 | MTR_1g104500 | 70.874 | 309 | 84 | 4 | 1 | 306 | 1 | 306 | 5.01e-161 | 451 |
| MS.gene024874.t1 | MTR_5g006290 | 81.275 | 251 | 45 | 1 | 1 | 249 | 1 | 251 | 1.30e-153 | 431 |
| MS.gene024874.t1 | MTR_2g099720 | 35.455 | 330 | 177 | 7 | 1 | 297 | 46 | 372 | 1.02e-59 | 195 |
| MS.gene024874.t1 | MTR_1g104513 | 47.500 | 80 | 40 | 1 | 204 | 283 | 1 | 78 | 6.62e-17 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024874.t1 | AT4G14930 | 58.333 | 300 | 114 | 5 | 4 | 297 | 11 | 305 | 6.47e-124 | 357 |
| MS.gene024874.t1 | AT4G14930 | 56.989 | 279 | 109 | 5 | 4 | 276 | 11 | 284 | 3.32e-111 | 325 |
| MS.gene024874.t1 | AT1G72880 | 36.076 | 316 | 171 | 5 | 9 | 294 | 63 | 377 | 4.77e-60 | 196 |
| MS.gene024874.t1 | AT1G72880 | 36.076 | 316 | 171 | 5 | 9 | 294 | 63 | 377 | 4.77e-60 | 196 |
Find 75 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGCTTCCTTTGCGGTTTC+TGG | 0.080018 | 5.4:-2126434 | MS.gene024874:intron |
| GGTAGTCAGTGGCATAAATA+AGG | 0.269395 | 5.4:-2126266 | MS.gene024874:CDS |
| GTCATATCCGATGACATTAT+TGG | 0.278609 | 5.4:+2121845 | None:intergenic |
| GCTTCCGACGAGAGGGGTTT+GGG | 0.282212 | 5.4:+2121209 | None:intergenic |
| ATTTGTATGTCCAGGGTTAA+AGG | 0.329046 | 5.4:-2122186 | MS.gene024874:intron |
| TTAACTTGTTTGACAGCAAC+AGG | 0.330194 | 5.4:+2126470 | None:intergenic |
| ATTCTTTATATCAACCAGTA+TGG | 0.333966 | 5.4:+2122104 | None:intergenic |
| AGCTTCCGACGAGAGGGGTT+TGG | 0.341404 | 5.4:+2121208 | None:intergenic |
| TGCTCCTGGTTTGAGAGCTT+TGG | 0.342858 | 5.4:-2126876 | MS.gene024874:CDS |
| ATTACTGTTACTCCTCTTGC+TGG | 0.350649 | 5.4:-2121290 | MS.gene024874:CDS |
| GTCAAACAAGTTAACATTCA+TGG | 0.358879 | 5.4:-2126461 | MS.gene024874:CDS |
| TTGTAGCCATTCCTCAAAAT+AGG | 0.371094 | 5.4:+2121238 | None:intergenic |
| CTCGCAAATAAAAGATGTTC+AGG | 0.372141 | 5.4:+2121773 | None:intergenic |
| GGTAAAAGTATCTTTAAGAT+TGG | 0.377853 | 5.4:-2121899 | MS.gene024874:CDS |
| ACCAGTATGGTGCTTATGAT+TGG | 0.395152 | 5.4:+2122117 | None:intergenic |
| GAGAGCTTTGGTTGAATCCC+TGG | 0.400114 | 5.4:-2126864 | MS.gene024874:CDS |
| AATATACCAGTCATATGAAA+TGG | 0.404590 | 5.4:+2125816 | None:intergenic |
| TCCAATCATAAGCACCATAC+TGG | 0.425888 | 5.4:-2122118 | MS.gene024874:CDS |
| TGGAACCGTTGCTTCCTTTG+CGG | 0.426141 | 5.4:-2126441 | MS.gene024874:CDS |
| ACCTGGTTTACTTACCAATC+AGG | 0.428530 | 5.4:+2126806 | None:intergenic |
| TTATGGTTAGCAACATCGTT+TGG | 0.448421 | 5.4:+2122042 | None:intergenic |
| CAATCTCCATTTCATATGAC+TGG | 0.460076 | 5.4:-2125822 | MS.gene024874:intron |
| ATTTCCTACAACACCTGATC+TGG | 0.463342 | 5.4:-2126287 | MS.gene024874:CDS |
| ACTACCAGATCAGGTGTTGT+AGG | 0.466354 | 5.4:+2126283 | None:intergenic |
| GTTTACTCAGGCACTGTAGC+TGG | 0.466587 | 5.4:-2125877 | MS.gene024874:CDS |
| AAAGTATCTTTAAGATTGGA+TGG | 0.485897 | 5.4:-2121895 | MS.gene024874:CDS |
| TCTTAGTCTGTGCTCCTGAT+TGG | 0.486695 | 5.4:-2126820 | MS.gene024874:intron |
| GGGTTACAAGCTAACAAGGC+AGG | 0.490829 | 5.4:-2121921 | MS.gene024874:CDS |
| GCCTTCAAGAATGTGTAATC+CGG | 0.499913 | 5.4:+2121401 | None:intergenic |
| AGGTGTATCAGTATCAGTAT+TGG | 0.502952 | 5.4:+2121823 | None:intergenic |
| GATTACACATTCTTGAAGGC+GGG | 0.514349 | 5.4:-2121398 | MS.gene024874:CDS |
| GTAGTCAGTGGCATAAATAA+GGG | 0.514796 | 5.4:-2126265 | MS.gene024874:CDS |
| CCGGCTGATTGCACTTCTCT+CGG | 0.516037 | 5.4:-2126325 | MS.gene024874:CDS |
| TCCGGATTACACATTCTTGA+AGG | 0.516264 | 5.4:-2121402 | MS.gene024874:CDS |
| CCGTTAGCCATTGTGTGACA+TGG | 0.521413 | 5.4:-2126499 | MS.gene024874:CDS |
| AAACGATGTTGCTAACCATA+AGG | 0.528344 | 5.4:-2122040 | MS.gene024874:intron |
| GAGATGGATGAGGGTAAGCT+AGG | 0.530939 | 5.4:-2126932 | MS.gene024874:CDS |
| TCATATGAAATGGAGATTGA+AGG | 0.532405 | 5.4:+2125826 | None:intergenic |
| TTTCTTCTTTGCAGGTACTC+CGG | 0.534209 | 5.4:-2126344 | MS.gene024874:intron |
| TGAAGGGATATCATTAAAGA+AGG | 0.534821 | 5.4:+2125843 | None:intergenic |
| CATATGAAATGGAGATTGAA+GGG | 0.535556 | 5.4:+2125827 | None:intergenic |
| CACTGTAGCTGGAGCTCGAG+AGG | 0.542909 | 5.4:-2125866 | MS.gene024874:CDS |
| ATTCTGATAACAAACGATGA+TGG | 0.543399 | 5.4:-2126905 | MS.gene024874:CDS |
| TTCCCTTTCAGTGTTTACTC+AGG | 0.543522 | 5.4:-2125889 | MS.gene024874:intron |
| ATGCCACTGACTACCAGATC+AGG | 0.544823 | 5.4:+2126274 | None:intergenic |
| CTTCCGACGAGAGGGGTTTG+GGG | 0.545820 | 5.4:+2121210 | None:intergenic |
| TGTACTTGATCATGACGATC+CGG | 0.547177 | 5.4:-2121420 | MS.gene024874:CDS |
| TGTTGTAGGAAATAGTGCTC+TGG | 0.558048 | 5.4:+2126297 | None:intergenic |
| GCACGAGAGAGACCAGCAAG+AGG | 0.562815 | 5.4:+2121278 | None:intergenic |
| CCGAGAGAAGTGCAATCAGC+CGG | 0.562865 | 5.4:+2126325 | None:intergenic |
| TCAACCAAAGCTCTCAAACC+AGG | 0.570986 | 5.4:+2126872 | None:intergenic |
| CTATAAAGCTTCCGACGAGA+GGG | 0.577851 | 5.4:+2121202 | None:intergenic |
| GATGGAGGCAAGTCACCTCT+CGG | 0.584180 | 5.4:-2121877 | MS.gene024874:CDS |
| CAAGTCACCTCTCGGACAGA+AGG | 0.585680 | 5.4:-2121869 | MS.gene024874:CDS |
| TAAAGAATCAAAGCTACCCT+GGG | 0.585985 | 5.4:-2122089 | MS.gene024874:CDS |
| GATGATGGTATCGATGCTCC+TGG | 0.590611 | 5.4:-2126890 | MS.gene024874:CDS |
| AGAAGGACCAATAATGTCAT+CGG | 0.592757 | 5.4:-2121852 | MS.gene024874:CDS |
| ACTATAAAGCTTCCGACGAG+AGG | 0.593114 | 5.4:+2121201 | None:intergenic |
| ATAAAGAATCAAAGCTACCC+TGG | 0.599661 | 5.4:-2122090 | MS.gene024874:CDS |
| CCATGTCACACAATGGCTAA+CGG | 0.601876 | 5.4:+2126499 | None:intergenic |
| ATAAATAAGGGTAGCAACTG+CGG | 0.609893 | 5.4:-2126253 | MS.gene024874:CDS |
| AAAAGGGTTACAAGCTAACA+AGG | 0.613958 | 5.4:-2121925 | MS.gene024874:intron |
| GGATTACACATTCTTGAAGG+CGG | 0.620421 | 5.4:-2121399 | MS.gene024874:CDS |
| GGTTACAAGCTAACAAGGCA+GGG | 0.632843 | 5.4:-2121920 | MS.gene024874:CDS |
| TCTTGCTGGTCTCTCTCGTG+CGG | 0.637394 | 5.4:-2121276 | MS.gene024874:CDS |
| AGAAACCGCAAAGGAAGCAA+CGG | 0.646643 | 5.4:+2126436 | None:intergenic |
| TATAAAGCTTCCGACGAGAG+GGG | 0.648568 | 5.4:+2121203 | None:intergenic |
| TGTCCCCAAACCCCTCTCGT+CGG | 0.652779 | 5.4:-2121213 | MS.gene024874:CDS |
| GCAGCAAGAGCAAAGTCGTG+TGG | 0.670936 | 5.4:+2122153 | None:intergenic |
| ACACCTGATCTGGTAGTCAG+TGG | 0.675568 | 5.4:-2126277 | MS.gene024874:CDS |
| GGTGAAGCCATGTCACACAA+TGG | 0.678364 | 5.4:+2126492 | None:intergenic |
| TAACTTGTTTGACAGCAACA+GGG | 0.679661 | 5.4:+2126471 | None:intergenic |
| CAACTAACCAGAAACCGCAA+AGG | 0.682214 | 5.4:+2126427 | None:intergenic |
| GTATCTTTAAGATTGGATGG+AGG | 0.682656 | 5.4:-2121892 | MS.gene024874:CDS |
| TATTGGTCCTTCTGTCCGAG+AGG | 0.692237 | 5.4:+2121862 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCATGATATTAAAATAATT+TGG | + | chr5.4:2124478-2124497 | None:intergenic | 10.0% |
| !! | TCATGATATTAAAATAATTT+GGG | + | chr5.4:2124477-2124496 | None:intergenic | 10.0% |
| !!! | ATAGAAAATATTAATGATTT+TGG | + | chr5.4:2124407-2124426 | None:intergenic | 10.0% |
| !!! | ATCTTTTATAACTAATTTAT+TGG | - | chr5.4:2126165-2126184 | MS.gene024874:intron | 10.0% |
| !!! | GTATTTTAAACTAATATAAA+GGG | + | chr5.4:2121523-2121542 | None:intergenic | 10.0% |
| !!! | TAAGATTTTAAGTAAAAAAA+AGG | + | chr5.4:2126407-2126426 | None:intergenic | 10.0% |
| !!! | TGTATTTTAAACTAATATAA+AGG | + | chr5.4:2121524-2121543 | None:intergenic | 10.0% |
| !! | ACAATTATAAGCTAAAAAAT+TGG | + | chr5.4:2122408-2122427 | None:intergenic | 15.0% |
| !! | TATTACATCATTATTCATTA+GGG | + | chr5.4:2126656-2126675 | None:intergenic | 15.0% |
| !! | TTAAGTAAAAAAAAGGAAAA+AGG | + | chr5.4:2126400-2126419 | None:intergenic | 15.0% |
| !! | TTATTACATCATTATTCATT+AGG | + | chr5.4:2126657-2126676 | None:intergenic | 15.0% |
| !!! | GTGTTATATTTAATTTTATG+TGG | + | chr5.4:2124252-2124271 | None:intergenic | 15.0% |
| !!! | TCTTTTTGTTAAAGTTATTT+CGG | - | chr5.4:2122169-2122188 | MS.gene024874:CDS | 15.0% |
| !! | AAACTTAACTTACTAAGTAA+TGG | + | chr5.4:2123316-2123335 | None:intergenic | 20.0% |
| !! | AATACATTGAAGACATTATT+AGG | + | chr5.4:2123809-2123828 | None:intergenic | 20.0% |
| !! | AATACTAAATCACATAAATC+CGG | - | chr5.4:2123250-2123269 | MS.gene024874:intron | 20.0% |
| !! | AATATGTTAGATTTAACATG+TGG | + | chr5.4:2124740-2124759 | None:intergenic | 20.0% |
| !! | AATATTCAGTAAATCATAAG+AGG | + | chr5.4:2122149-2122168 | None:intergenic | 20.0% |
| !! | ACTTATTACAATATACCTTA+TGG | + | chr5.4:2126109-2126128 | None:intergenic | 20.0% |
| !! | ATAACATTGTTTCAAATCAA+AGG | + | chr5.4:2122985-2123004 | None:intergenic | 20.0% |
| !! | ATAACCAAACTTCATAAAAT+GGG | - | chr5.4:2124203-2124222 | MS.gene024874:intron | 20.0% |
| !! | ATACATTGAAGACATTATTA+GGG | + | chr5.4:2123808-2123827 | None:intergenic | 20.0% |
| !! | ATATTCAGTAAATCATAAGA+GGG | + | chr5.4:2122148-2122167 | None:intergenic | 20.0% |
| !! | ATGTATATGATTATAACCTT+TGG | + | chr5.4:2123088-2123107 | None:intergenic | 20.0% |
| !! | ATTCAATGTATGATATATCT+TGG | + | chr5.4:2124136-2124155 | None:intergenic | 20.0% |
| !! | ATTCTTTAATCTCAATCAAA+CGG | + | chr5.4:2121391-2121410 | None:intergenic | 20.0% |
| !! | CAATATATACAACAAATCTT+TGG | + | chr5.4:2122564-2122583 | None:intergenic | 20.0% |
| !! | CATGATAATATGAAAAGTAA+TGG | + | chr5.4:2124515-2124534 | None:intergenic | 20.0% |
| !! | CTATGTAGAACTATAAAAAA+GGG | + | chr5.4:2126480-2126499 | None:intergenic | 20.0% |
| !! | CTTATAATTGTAACTGATAA+CGG | - | chr5.4:2122417-2122436 | MS.gene024874:intron | 20.0% |
| !! | GTTAAATATTGTTATAGCAA+AGG | + | chr5.4:2124072-2124091 | None:intergenic | 20.0% |
| !! | GTTTATGTTAAATTTACATG+TGG | + | chr5.4:2124925-2124944 | None:intergenic | 20.0% |
| !! | TAAATCTGTAAAATACTGTT+AGG | + | chr5.4:2122800-2122819 | None:intergenic | 20.0% |
| !! | TAAATTGTCAAAATATCAAG+TGG | + | chr5.4:2124608-2124627 | None:intergenic | 20.0% |
| !! | TAACATTGTTTCAAATCAAA+GGG | + | chr5.4:2122984-2123003 | None:intergenic | 20.0% |
| !! | TACTATTATTGACCATTTAA+AGG | - | chr5.4:2125920-2125939 | MS.gene024874:intron | 20.0% |
| !! | TAGAATAACTTATAAAGTGT+TGG | + | chr5.4:2125858-2125877 | None:intergenic | 20.0% |
| !! | TATGATTTACTTGTGATTAA+AGG | + | chr5.4:2125070-2125089 | None:intergenic | 20.0% |
| !! | TTTATTATATGACATGTAGA+CGG | - | chr5.4:2121553-2121572 | MS.gene024874:intron | 20.0% |
| !!! | AACAGTATTTTACAGATTTA+TGG | - | chr5.4:2122800-2122819 | MS.gene024874:intron | 20.0% |
| !!! | AATAATCTCTTAACTTTTGT+AGG | - | chr5.4:2126672-2126691 | MS.gene024874:intron | 20.0% |
| !!! | ATTGGTAATCAATTAGATTT+GGG | - | chr5.4:2123770-2123789 | MS.gene024874:intron | 20.0% |
| !!! | ATTTAGTATTTTGAAAATGG+TGG | + | chr5.4:2123240-2123259 | None:intergenic | 20.0% |
| !!! | GTGATTTAGTATTTTGAAAA+TGG | + | chr5.4:2123243-2123262 | None:intergenic | 20.0% |
| !!! | TCAATAGAAAAATTTTCAAC+AGG | + | chr5.4:2122049-2122068 | None:intergenic | 20.0% |
| !!! | TGTTGTATATATTGATTGTT+GGG | - | chr5.4:2122570-2122589 | MS.gene024874:intron | 20.0% |
| !!! | TTAAAGTGATTCCATTATTT+TGG | - | chr5.4:2123197-2123216 | MS.gene024874:intron | 20.0% |
| !!! | TTGTTGTATATATTGATTGT+TGG | - | chr5.4:2122569-2122588 | MS.gene024874:intron | 20.0% |
| !!! | TTTAGTATTTTGAAAATGGT+GGG | + | chr5.4:2123239-2123258 | None:intergenic | 20.0% |
| !!! | TTTGATTTGAAACAATGTTA+TGG | - | chr5.4:2122984-2123003 | MS.gene024874:intron | 20.0% |
| ! | AACATTGTTTCAAATCAAAG+GGG | + | chr5.4:2122983-2123002 | None:intergenic | 25.0% |
| ! | AATATACCAGTCATATGAAA+TGG | + | chr5.4:2122318-2122337 | None:intergenic | 25.0% |
| ! | ACATACAAATAGCCTTTAAA+TGG | + | chr5.4:2125935-2125954 | None:intergenic | 25.0% |
| ! | ACTGATACACCTAAAAATTA+TGG | - | chr5.4:2126319-2126338 | MS.gene024874:CDS | 25.0% |
| ! | ATAACTTACACATAGAATCT+CGG | - | chr5.4:2123400-2123419 | MS.gene024874:intron | 25.0% |
| ! | ATATATGTCGTGGAAATTTA+TGG | + | chr5.4:2124970-2124989 | None:intergenic | 25.0% |
| ! | ATATTCAAAAAACATTTCCC+AGG | + | chr5.4:2126062-2126081 | None:intergenic | 25.0% |
| ! | ATGATTATAACCTTTGACAA+AGG | + | chr5.4:2123023-2123042 | None:intergenic | 25.0% |
| ! | ATTCTTTATATCAACCAGTA+TGG | + | chr5.4:2126030-2126049 | None:intergenic | 25.0% |
| ! | CAAATCTAATTGATTACCAA+TGG | + | chr5.4:2123771-2123790 | None:intergenic | 25.0% |
| ! | CATAACCAAACTTCATAAAA+TGG | - | chr5.4:2124202-2124221 | MS.gene024874:intron | 25.0% |
| ! | CATTTCAAATTTCAAGGAAA+TGG | + | chr5.4:2122124-2122143 | None:intergenic | 25.0% |
| ! | CTCTTAAATTCTCATGAAAA+GGG | + | chr5.4:2123483-2123502 | None:intergenic | 25.0% |
| ! | GACTAAGACATTAAAAAGAT+TGG | + | chr5.4:2121299-2121318 | None:intergenic | 25.0% |
| ! | GCTATGTAGAACTATAAAAA+AGG | + | chr5.4:2126481-2126500 | None:intergenic | 25.0% |
| ! | TAAGAAGCTATTGTTATAGA+AGG | + | chr5.4:2125899-2125918 | None:intergenic | 25.0% |
| ! | TATAATGCACTATAAATGCT+TGG | + | chr5.4:2122936-2122955 | None:intergenic | 25.0% |
| ! | TATTCAAAAAACATTTCCCA+GGG | + | chr5.4:2126061-2126080 | None:intergenic | 25.0% |
| ! | TGATTATAACCTTTGACAAA+GGG | + | chr5.4:2123022-2123041 | None:intergenic | 25.0% |
| ! | TTGAAACCTGAAAAGATTAA+TGG | - | chr5.4:2122608-2122627 | MS.gene024874:intron | 25.0% |
| !! | ATTTTGCATTTCATAGCAAA+TGG | - | chr5.4:2121998-2122017 | MS.gene024874:intron | 25.0% |
| !! | CATTGGTAATCAATTAGATT+TGG | - | chr5.4:2123769-2123788 | MS.gene024874:intron | 25.0% |
| !! | TAATCCCATTTTATGAAGTT+TGG | + | chr5.4:2124210-2124229 | None:intergenic | 25.0% |
| !! | TCTTAACTTTTGTAGGTAAA+AGG | - | chr5.4:2126679-2126698 | MS.gene024874:intron | 25.0% |
| !!! | AAAGTATCTTTAAGATTGGA+TGG | - | chr5.4:2126236-2126255 | MS.gene024874:intron | 25.0% |
| !!! | GGTAAAAGTATCTTTAAGAT+TGG | - | chr5.4:2126232-2126251 | MS.gene024874:intron | 25.0% |
| !!! | TGTAAGTTGATATATGTTCA+TGG | + | chr5.4:2124439-2124458 | None:intergenic | 25.0% |
| !!! | TTAGTATTTTGAAAATGGTG+GGG | + | chr5.4:2123238-2123257 | None:intergenic | 25.0% |
| AAATCGAACCTAAAGATTGT+TGG | - | chr5.4:2125089-2125108 | MS.gene024874:intron | 30.0% | |
| AATGAATGTCTCGAGAATTA+TGG | - | chr5.4:2122440-2122459 | MS.gene024874:intron | 30.0% | |
| ACTATAAATGCTTGGCATTT+GGG | + | chr5.4:2122928-2122947 | None:intergenic | 30.0% | |
| ACTGTATATTGGATGCAATA+AGG | - | chr5.4:2122701-2122720 | MS.gene024874:intron | 30.0% | |
| AGTCATCTTCATCATATTCA+TGG | + | chr5.4:2125148-2125167 | None:intergenic | 30.0% | |
| ATACACTTGAATCAATGCAA+AGG | - | chr5.4:2123043-2123062 | MS.gene024874:intron | 30.0% | |
| ATCCAATATACAGTTATTGG+TGG | + | chr5.4:2122695-2122714 | None:intergenic | 30.0% | |
| ATCTAATTGATTACCAATGG+TGG | + | chr5.4:2123768-2123787 | None:intergenic | 30.0% | |
| ATGGTTTACTTGCTTTATGT+TGG | - | chr5.4:2122459-2122478 | MS.gene024874:intron | 30.0% | |
| ATTAAACATCCCTTTGTCAA+AGG | - | chr5.4:2123010-2123029 | MS.gene024874:intron | 30.0% | |
| ATTCTGATAACAAACGATGA+TGG | - | chr5.4:2121226-2121245 | MS.gene024874:CDS | 30.0% | |
| ATTTGACGAAATGATTGACA+AGG | + | chr5.4:2123857-2123876 | None:intergenic | 30.0% | |
| CAAAAGTTGTAACTCTTCAT+GGG | + | chr5.4:2123175-2123194 | None:intergenic | 30.0% | |
| CAATATACAGTTATTGGTGA+GGG | + | chr5.4:2125322-2125341 | None:intergenic | 30.0% | |
| CACTGCTTAAAGTCTAAAAA+AGG | + | chr5.4:2121946-2121965 | None:intergenic | 30.0% | |
| CACTTGTTCTAATGAATAGT+TGG | + | chr5.4:2123377-2123396 | None:intergenic | 30.0% | |
| CATATGAAATGGAGATTGAA+GGG | + | chr5.4:2122307-2122326 | None:intergenic | 30.0% | |
| CCACGACATATATTCATAAA+TGG | - | chr5.4:2124977-2124996 | MS.gene024874:intron | 30.0% | |
| CCATTTATGAATATATGTCG+TGG | + | chr5.4:2124980-2124999 | None:intergenic | 30.0% | |
| CTAAACAATCCTAAACTACT+TGG | - | chr5.4:2126596-2126615 | MS.gene024874:intron | 30.0% | |
| CTATATGAATTTGATCACCA+CGG | + | chr5.4:2121352-2121371 | None:intergenic | 30.0% | |
| CTTACAAGTCTCTTTATCAA+TGG | + | chr5.4:2123428-2123447 | None:intergenic | 30.0% | |
| GAATATGTTGTAATAGACTG+AGG | - | chr5.4:2126515-2126534 | MS.gene024874:intron | 30.0% | |
| GACATATAGCATATATTTGC+TGG | + | chr5.4:2123588-2123607 | None:intergenic | 30.0% | |
| GATGTGAATTCTTTCATGTT+TGG | - | chr5.4:2121451-2121470 | MS.gene024874:intron | 30.0% | |
| GATTATAACCTTTGGCAAAA+GGG | + | chr5.4:2123080-2123099 | None:intergenic | 30.0% | |
| GATTATAACCTTTGGCAAAA+TGG | + | chr5.4:2123080-2123099 | None:intergenic | 30.0% | |
| GCTCTTAAATTCTCATGAAA+AGG | + | chr5.4:2123484-2123503 | None:intergenic | 30.0% | |
| GTCAAACAAGTTAACATTCA+TGG | - | chr5.4:2121670-2121689 | MS.gene024874:intron | 30.0% | |
| TATGCTATATGTCCATTAAG+AGG | - | chr5.4:2123595-2123614 | MS.gene024874:intron | 30.0% | |
| TATTCTCATAGCTATGTCTA+TGG | - | chr5.4:2123940-2123959 | MS.gene024874:intron | 30.0% | |
| TCAAAAGTTGTAACTCTTCA+TGG | + | chr5.4:2123176-2123195 | None:intergenic | 30.0% | |
| TCATATGAAATGGAGATTGA+AGG | + | chr5.4:2122308-2122327 | None:intergenic | 30.0% | |
| TCATTATTCATTAGGGAAAG+AGG | + | chr5.4:2126649-2126668 | None:intergenic | 30.0% | |
| TCCAATATACAGTTATTGGT+GGG | + | chr5.4:2122694-2122713 | None:intergenic | 30.0% | |
| TCTATATGATCTTGATCCAA+CGG | - | chr5.4:2121423-2121442 | MS.gene024874:CDS | 30.0% | |
| TGAAGGGATATCATTAAAGA+AGG | + | chr5.4:2122291-2122310 | None:intergenic | 30.0% | |
| TGAGCTTATGAAAATGGAAA+TGG | + | chr5.4:2121745-2121764 | None:intergenic | 30.0% | |
| TGATTATAACCTTTGGCAAA+AGG | + | chr5.4:2123081-2123100 | None:intergenic | 30.0% | |
| TGCATCCAATATACAGTTAT+TGG | + | chr5.4:2122698-2122717 | None:intergenic | 30.0% | |
| TGCTTAAAGTCTAAAAAAGG+CGG | + | chr5.4:2121943-2121962 | None:intergenic | 30.0% | |
| TGGGAATCATTCATATACAT+TGG | + | chr5.4:2123156-2123175 | None:intergenic | 30.0% | |
| TGTAAGATGACACATTAAGA+AGG | - | chr5.4:2123442-2123461 | MS.gene024874:intron | 30.0% | |
| TGTAGAACTATAAAAAAGGG+TGG | + | chr5.4:2126477-2126496 | None:intergenic | 30.0% | |
| TTGGACCATAAGAAGAAAAA+GGG | + | chr5.4:2123635-2123654 | None:intergenic | 30.0% | |
| TTTATGTTGGAACTTGTGTT+GGG | - | chr5.4:2122472-2122491 | MS.gene024874:intron | 30.0% | |
| ! | ATATTTTCAACATGCTTCTG+TGG | - | chr5.4:2122333-2122352 | MS.gene024874:intron | 30.0% |
| ! | GATTAAAGGCTGCAATTTTT+GGG | + | chr5.4:2125056-2125075 | None:intergenic | 30.0% |
| ! | GATTTAGAGTAAGAGAATGA+TGG | - | chr5.4:2122861-2122880 | MS.gene024874:intron | 30.0% |
| ! | GCATAACCATTAATCTTTTC+AGG | + | chr5.4:2122617-2122636 | None:intergenic | 30.0% |
| ! | TACATTTTCATCCATGACTA+CGG | + | chr5.4:2125020-2125039 | None:intergenic | 30.0% |
| ! | TGATTAAAGGCTGCAATTTT+TGG | + | chr5.4:2125057-2125076 | None:intergenic | 30.0% |
| !! | GTTGGTGATTTCCAAAATAA+TGG | + | chr5.4:2123211-2123230 | None:intergenic | 30.0% |
| !! | TAGTATTTTGAAAATGGTGG+GGG | + | chr5.4:2123237-2123256 | None:intergenic | 30.0% |
| !!! | CTTGCAACAATTTTTGAAAC+AGG | + | chr5.4:2121490-2121509 | None:intergenic | 30.0% |
| AAAAGGGTTACAAGCTAACA+AGG | - | chr5.4:2126206-2126225 | MS.gene024874:intron | 35.0% | |
| AAACGATGTTGCTAACCATA+AGG | - | chr5.4:2126091-2126110 | MS.gene024874:intron | 35.0% | |
| AAAGGCTATTTGTATGTCCA+GGG | - | chr5.4:2125938-2125957 | MS.gene024874:intron | 35.0% | |
| AAGATTGTTGGAACTTGTGT+TGG | - | chr5.4:2125101-2125120 | MS.gene024874:intron | 35.0% | |
| AATGTCCATCCAAGTAGTTT+AGG | + | chr5.4:2126608-2126627 | None:intergenic | 35.0% | |
| AATTCCATGCCTTCAGATAA+TGG | - | chr5.4:2123274-2123293 | MS.gene024874:intron | 35.0% | |
| ACAATCCTAAACTACTTGGA+TGG | - | chr5.4:2126600-2126619 | MS.gene024874:intron | 35.0% | |
| ACCATAAGAAGAAAAAGGGT+AGG | + | chr5.4:2123631-2123650 | None:intergenic | 35.0% | |
| ACCTATGTGAGAATGAAGTT+TGG | + | chr5.4:2123531-2123550 | None:intergenic | 35.0% | |
| AGAAGGACCAATAATGTCAT+CGG | - | chr5.4:2126279-2126298 | MS.gene024874:CDS | 35.0% | |
| AGATTGTTGGAACTTGTGTT+GGG | - | chr5.4:2125102-2125121 | MS.gene024874:intron | 35.0% | |
| AGGTGTATCAGTATCAGTAT+TGG | + | chr5.4:2126311-2126330 | None:intergenic | 35.0% | |
| AGTCATCTTCATCATCTTCT+TGG | + | chr5.4:2122518-2122537 | None:intergenic | 35.0% | |
| ATAAAGAATCAAAGCTACCC+TGG | - | chr5.4:2126041-2126060 | MS.gene024874:intron | 35.0% | |
| ATAAATAAGGGTAGCAACTG+CGG | - | chr5.4:2121878-2121897 | MS.gene024874:CDS | 35.0% | |
| ATCGAACCTAAAGGTTAGTA+TGG | + | chr5.4:2122666-2122685 | None:intergenic | 35.0% | |
| ATTACTCTTTCCTTTAACCC+TGG | + | chr5.4:2125958-2125977 | None:intergenic | 35.0% | |
| ATTTGTATGTCCAGGGTTAA+AGG | - | chr5.4:2125945-2125964 | MS.gene024874:intron | 35.0% | |
| CAATATACAGTTATTGGTGG+GGG | + | chr5.4:2122692-2122711 | None:intergenic | 35.0% | |
| CAATCTCCATTTCATATGAC+TGG | - | chr5.4:2122309-2122328 | MS.gene024874:intron | 35.0% | |
| CACAAGTTCCAACAATCTTT+AGG | + | chr5.4:2125100-2125119 | None:intergenic | 35.0% | |
| CACTATAAATGCTTGGCATT+TGG | + | chr5.4:2122929-2122948 | None:intergenic | 35.0% | |
| CCAATATACAGTTATTGGTG+AGG | + | chr5.4:2122693-2122712 | None:intergenic | 35.0% | |
| CCAATATACAGTTATTGGTG+GGG | + | chr5.4:2122693-2122712 | None:intergenic | 35.0% | |
| CCTCACCAATAACTGTATAT+TGG | - | chr5.4:2125320-2125339 | MS.gene024874:intron | 35.0% | |
| CTCATGCATTAGAGAATTGA+TGG | - | chr5.4:2122836-2122855 | MS.gene024874:intron | 35.0% | |
| CTCGCAAATAAAAGATGTTC+AGG | + | chr5.4:2126361-2126380 | None:intergenic | 35.0% | |
| CTTAAAGTCTAAAAAAGGCG+GGG | + | chr5.4:2121941-2121960 | None:intergenic | 35.0% | |
| CTTGGACCATAAGAAGAAAA+AGG | + | chr5.4:2123636-2123655 | None:intergenic | 35.0% | |
| CTTTATGTTGGAACTTGTGT+TGG | - | chr5.4:2122471-2122490 | MS.gene024874:intron | 35.0% | |
| GAAAAGGGATATATGACACA+AGG | + | chr5.4:2123468-2123487 | None:intergenic | 35.0% | |
| GAGGGTCATTTCAAATTTCA+AGG | + | chr5.4:2122130-2122149 | None:intergenic | 35.0% | |
| GCTTAAAGTCTAAAAAAGGC+GGG | + | chr5.4:2121942-2121961 | None:intergenic | 35.0% | |
| GTAGTCAGTGGCATAAATAA+GGG | - | chr5.4:2121866-2121885 | MS.gene024874:CDS | 35.0% | |
| GTCATATCCGATGACATTAT+TGG | + | chr5.4:2126289-2126308 | None:intergenic | 35.0% | |
| TAAAGAATCAAAGCTACCCT+GGG | - | chr5.4:2126042-2126061 | MS.gene024874:intron | 35.0% | |
| TAAAGGCTATTTGTATGTCC+AGG | - | chr5.4:2125937-2125956 | MS.gene024874:intron | 35.0% | |
| TAGACAGAACAGAACAACTA+TGG | + | chr5.4:2122221-2122240 | None:intergenic | 35.0% | |
| TCATTCCCAAATAGTATGGT+AGG | - | chr5.4:2123340-2123359 | MS.gene024874:intron | 35.0% | |
| TGAAGACATTATTAGGGATG+TGG | + | chr5.4:2123802-2123821 | None:intergenic | 35.0% | |
| TGACAATAGATACATCCCAA+GGG | + | chr5.4:2123668-2123687 | None:intergenic | 35.0% | |
| TGAGCTTGAGCTTATGAAAA+TGG | + | chr5.4:2121751-2121770 | None:intergenic | 35.0% | |
| TTATGGTTAGCAACATCGTT+TGG | + | chr5.4:2126092-2126111 | None:intergenic | 35.0% | |
| TTATGTTGGAACTTGTGTTG+GGG | - | chr5.4:2122473-2122492 | MS.gene024874:intron | 35.0% | |
| TTATTCATTAGGGAAAGAGG+AGG | + | chr5.4:2126646-2126665 | None:intergenic | 35.0% | |
| TTGACAAGGAATGATGTCTT+TGG | + | chr5.4:2123843-2123862 | None:intergenic | 35.0% | |
| TTGACAATAGATACATCCCA+AGG | + | chr5.4:2123669-2123688 | None:intergenic | 35.0% | |
| TTGCTGGAATGCATACTTAT+GGG | + | chr5.4:2123572-2123591 | None:intergenic | 35.0% | |
| TTGTAGCCATTCCTCAAAAT+AGG | + | chr5.4:2126896-2126915 | None:intergenic | 35.0% | |
| TTTGCTGGAATGCATACTTA+TGG | + | chr5.4:2123573-2123592 | None:intergenic | 35.0% | |
| ! | AGATTGTCAGACCTATTTTG+AGG | - | chr5.4:2126882-2126901 | MS.gene024874:CDS | 35.0% |
| ! | ATTAAGCACCATTTTGCCAA+AGG | - | chr5.4:2125698-2125717 | MS.gene024874:intron | 35.0% |
| ! | CAATTGACAAAAGTGTGTCA+TGG | + | chr5.4:2124010-2124029 | None:intergenic | 35.0% |
| ! | GATGACGTGCCATAATTTTT+AGG | + | chr5.4:2126331-2126350 | None:intergenic | 35.0% |
| ! | GGTGTTTTCTCTCATATGAA+GGG | + | chr5.4:2122962-2122981 | None:intergenic | 35.0% |
| ! | TCCTACCCTTTTTCTTCTTA+TGG | - | chr5.4:2123627-2123646 | MS.gene024874:intron | 35.0% |
| ! | TGTCATGGTTTGATGATAGT+TGG | + | chr5.4:2123995-2124014 | None:intergenic | 35.0% |
| !! | AAAAAGATTGGTGTTGACCA+GGG | + | chr5.4:2121287-2121306 | None:intergenic | 35.0% |
| !! | ACATCTTTTATTTGCGAGAG+AGG | - | chr5.4:2126363-2126382 | MS.gene024874:intron | 35.0% |
| !! | CGACTATTTTTCTTCTTTGC+AGG | - | chr5.4:2121779-2121798 | MS.gene024874:CDS | 35.0% |
| !! | GTATCTTTAAGATTGGATGG+AGG | - | chr5.4:2126239-2126258 | MS.gene024874:intron | 35.0% |
| !! | TAAAAAGATTGGTGTTGACC+AGG | + | chr5.4:2121288-2121307 | None:intergenic | 35.0% |
| !! | TAACTTGTTTGACAGCAACA+GGG | + | chr5.4:2121663-2121682 | None:intergenic | 35.0% |
| !! | TTAACTTGTTTGACAGCAAC+AGG | + | chr5.4:2121664-2121683 | None:intergenic | 35.0% |
| ACCAGTATGGTGCTTATGAT+TGG | + | chr5.4:2126017-2126036 | None:intergenic | 40.0% | |
| ACCTGGTTTACTTACCAATC+AGG | + | chr5.4:2121328-2121347 | None:intergenic | 40.0% | |
| ACTTGAGTAGCATCAAGTCT+TGG | + | chr5.4:2123732-2123751 | None:intergenic | 40.0% | |
| ACTTGATGCTACTCAAGTGT+GGG | - | chr5.4:2123734-2123753 | MS.gene024874:intron | 40.0% | |
| AGAAGAAAAAGGGTAGGATG+AGG | + | chr5.4:2123625-2123644 | None:intergenic | 40.0% | |
| AGCTTGCCTACCATACTATT+TGG | + | chr5.4:2123349-2123368 | None:intergenic | 40.0% | |
| AGGAACTCATAGTATCCTGA+AGG | + | chr5.4:2122743-2122762 | None:intergenic | 40.0% | |
| ATACTGTTAGGAGATACGCT+TGG | + | chr5.4:2122788-2122807 | None:intergenic | 40.0% | |
| ATGCAAACTCAAAGCGTATG+GGG | - | chr5.4:2122637-2122656 | MS.gene024874:intron | 40.0% | |
| ATTACTGTTACTCCTCTTGC+TGG | - | chr5.4:2126841-2126860 | MS.gene024874:CDS | 40.0% | |
| ATTGTTGGAACTTGTGTTGG+GGG | - | chr5.4:2125104-2125123 | MS.gene024874:intron | 40.0% | |
| ATTTCCTACAACACCTGATC+TGG | - | chr5.4:2121844-2121863 | MS.gene024874:CDS | 40.0% | |
| CATGCAAACTCAAAGCGTAT+GGG | - | chr5.4:2122636-2122655 | MS.gene024874:intron | 40.0% | |
| CCCCACCAATAACTGTATAT+TGG | - | chr5.4:2122690-2122709 | MS.gene024874:intron | 40.0% | |
| CTAATGCATGAGTGAATTGC+TGG | + | chr5.4:2122828-2122847 | None:intergenic | 40.0% | |
| CTTGAGTAGCATCAAGTCTT+GGG | + | chr5.4:2123731-2123750 | None:intergenic | 40.0% | |
| GAACTCATAGTATCCTGAAG+GGG | + | chr5.4:2122741-2122760 | None:intergenic | 40.0% | |
| GAATTCACATCAATGACCGT+TGG | + | chr5.4:2121442-2121461 | None:intergenic | 40.0% | |
| GACAATAGATACATCCCAAG+GGG | + | chr5.4:2123667-2123686 | None:intergenic | 40.0% | |
| GATACCATTATCTGAAGGCA+TGG | + | chr5.4:2123281-2123300 | None:intergenic | 40.0% | |
| GATTACACATTCTTGAAGGC+GGG | - | chr5.4:2126733-2126752 | MS.gene024874:intron | 40.0% | |
| GATTGTTGGAACTTGTGTTG+GGG | - | chr5.4:2125103-2125122 | MS.gene024874:intron | 40.0% | |
| GCCAAACTTCATTCTCACAT+AGG | - | chr5.4:2123527-2123546 | MS.gene024874:intron | 40.0% | |
| GCCTTCAAGAATGTGTAATC+CGG | + | chr5.4:2126733-2126752 | None:intergenic | 40.0% | |
| GCTTGCCTACCATACTATTT+GGG | + | chr5.4:2123348-2123367 | None:intergenic | 40.0% | |
| GGAACTCATAGTATCCTGAA+GGG | + | chr5.4:2122742-2122761 | None:intergenic | 40.0% | |
| GGATTACACATTCTTGAAGG+CGG | - | chr5.4:2126732-2126751 | MS.gene024874:intron | 40.0% | |
| GGTAGTCAGTGGCATAAATA+AGG | - | chr5.4:2121865-2121884 | MS.gene024874:CDS | 40.0% | |
| TATGTTGGAACTTGTGTTGG+GGG | - | chr5.4:2122474-2122493 | MS.gene024874:intron | 40.0% | |
| TCCAATCATAAGCACCATAC+TGG | - | chr5.4:2126013-2126032 | MS.gene024874:intron | 40.0% | |
| TCCGGATTACACATTCTTGA+AGG | - | chr5.4:2126729-2126748 | MS.gene024874:intron | 40.0% | |
| TCCTGATTGGTAAGTAAACC+AGG | - | chr5.4:2121324-2121343 | MS.gene024874:intron | 40.0% | |
| TCGCTCATTCCCAAATAGTA+TGG | - | chr5.4:2123336-2123355 | MS.gene024874:intron | 40.0% | |
| TCGTCATCTGTTCATAGCTT+AGG | + | chr5.4:2122096-2122115 | None:intergenic | 40.0% | |
| TGCCTGAGTAAACACTGAAA+GGG | + | chr5.4:2122247-2122266 | None:intergenic | 40.0% | |
| TGCTGGAATGCATACTTATG+GGG | + | chr5.4:2123571-2123590 | None:intergenic | 40.0% | |
| TGGATGCAATAAGGAATGAC+CGG | - | chr5.4:2122710-2122729 | MS.gene024874:intron | 40.0% | |
| TGTACTTGATCATGACGATC+CGG | - | chr5.4:2126711-2126730 | MS.gene024874:intron | 40.0% | |
| TGTTGTAGGAAATAGTGCTC+TGG | + | chr5.4:2121837-2121856 | None:intergenic | 40.0% | |
| TTCCCTTTCAGTGTTTACTC+AGG | - | chr5.4:2122242-2122261 | MS.gene024874:intron | 40.0% | |
| TTTCTTCTTTGCAGGTACTC+CGG | - | chr5.4:2121787-2121806 | MS.gene024874:CDS | 40.0% | |
| ! | ATCTGAAGGCATGGAATTTC+CGG | + | chr5.4:2123272-2123291 | None:intergenic | 40.0% |
| ! | ATTAAGCACCCTTTTGCCAA+AGG | - | chr5.4:2123069-2123088 | MS.gene024874:intron | 40.0% |
| ! | GGATGAGGTTTTCCTCTTAA+TGG | + | chr5.4:2123610-2123629 | None:intergenic | 40.0% |
| ! | GGGTGTTTTCTCTCATATGA+AGG | + | chr5.4:2122963-2122982 | None:intergenic | 40.0% |
| ! | GTTTAGTCTTCCAGAGAACT+TGG | + | chr5.4:2126582-2126601 | None:intergenic | 40.0% |
| !! | CTTTTATTTGCGAGAGAGGT+AGG | - | chr5.4:2126367-2126386 | MS.gene024874:intron | 40.0% |
| !! | GTCAGACCTATTTTGAGGAA+TGG | - | chr5.4:2126887-2126906 | MS.gene024874:CDS | 40.0% |
| !!! | TCCAAGTACTTTTTCCCCTT+GGG | - | chr5.4:2123650-2123669 | MS.gene024874:intron | 40.0% |
| AAAGGGTGGAGTTCATCTGA+AGG | + | chr5.4:2126463-2126482 | None:intergenic | 45.0% | |
| AATGAAGTTTGGCCGCTTCA+CGG | + | chr5.4:2123520-2123539 | None:intergenic | 45.0% | |
| AATTTGATCACCACGGAACC+TGG | + | chr5.4:2121345-2121364 | None:intergenic | 45.0% | |
| AGAAACCGCAAAGGAAGCAA+CGG | + | chr5.4:2121698-2121717 | None:intergenic | 45.0% | |
| CAACTAACCAGAAACCGCAA+AGG | + | chr5.4:2121707-2121726 | None:intergenic | 45.0% | |
| CCATGTCACACAATGGCTAA+CGG | + | chr5.4:2121635-2121654 | None:intergenic | 45.0% | |
| CGCGAGATACCATTATCTGA+AGG | + | chr5.4:2123286-2123305 | None:intergenic | 45.0% | |
| CTATAAAGCTTCCGACGAGA+GGG | + | chr5.4:2126932-2126951 | None:intergenic | 45.0% | |
| CTTGGCATTTGGGCATTAGT+TGG | + | chr5.4:2122918-2122937 | None:intergenic | 45.0% | |
| GACTTGATGCTACTCAAGTG+TGG | - | chr5.4:2123733-2123752 | MS.gene024874:intron | 45.0% | |
| GCATCAAGTCTTGGGTTCAA+TGG | + | chr5.4:2123723-2123742 | None:intergenic | 45.0% | |
| GCATGCAAACTCAAAGCGTA+TGG | - | chr5.4:2122635-2122654 | MS.gene024874:intron | 45.0% | |
| GGGTTGCCATACTAACCTTT+AGG | - | chr5.4:2122657-2122676 | MS.gene024874:intron | 45.0% | |
| GGTTACAAGCTAACAAGGCA+GGG | - | chr5.4:2126211-2126230 | MS.gene024874:intron | 45.0% | |
| GTCGTCTGTGCATGGAAAAA+GGG | - | chr5.4:2126190-2126209 | MS.gene024874:intron | 45.0% | |
| GTGCCTGAGTAAACACTGAA+AGG | + | chr5.4:2122248-2122267 | None:intergenic | 45.0% | |
| TATAAAGCTTCCGACGAGAG+GGG | + | chr5.4:2126931-2126950 | None:intergenic | 45.0% | |
| TCAACCAAAGCTCTCAAACC+AGG | + | chr5.4:2121262-2121281 | None:intergenic | 45.0% | |
| TCATCCATGACTACGGTGAA+CGG | + | chr5.4:2125013-2125032 | None:intergenic | 45.0% | |
| TCTTAGTCTGTGCTCCTGAT+TGG | - | chr5.4:2121311-2121330 | MS.gene024874:intron | 45.0% | |
| TGGTTGTGCAATACACGTCA+AGG | + | chr5.4:2122763-2122782 | None:intergenic | 45.0% | |
| TGTCGTCTGTGCATGGAAAA+AGG | - | chr5.4:2126189-2126208 | MS.gene024874:intron | 45.0% | |
| TTTACCGTTCACCGTAGTCA+TGG | - | chr5.4:2125006-2125025 | MS.gene024874:intron | 45.0% | |
| ! | ACTACCAGATCAGGTGTTGT+AGG | + | chr5.4:2121851-2121870 | None:intergenic | 45.0% |
| ! | TATTGGTTGTCGTCTGTGCA+TGG | - | chr5.4:2126182-2126201 | MS.gene024874:intron | 45.0% |
| ! | TGAAAATGGTGGGGGATTGT+TGG | + | chr5.4:2123229-2123248 | None:intergenic | 45.0% |
| !! | CTTTGCGGTTTCTGGTTAGT+TGG | - | chr5.4:2121705-2121724 | MS.gene024874:intron | 45.0% |
| !! | GAAGTTGATGCCAAGTTCTC+TGG | - | chr5.4:2126569-2126588 | MS.gene024874:intron | 45.0% |
| !! | TCCCAAGGGGAAAAAGTACT+TGG | + | chr5.4:2123654-2123673 | None:intergenic | 45.0% |
| !!! | GTCCAAGTACTTTTTCCCCT+TGG | - | chr5.4:2123649-2123668 | MS.gene024874:intron | 45.0% |
| AACCCTTGAACTCCGTGAAG+CGG | - | chr5.4:2123505-2123524 | MS.gene024874:intron | 50.0% | |
| ACACCTGATCTGGTAGTCAG+TGG | - | chr5.4:2121854-2121873 | MS.gene024874:CDS | 50.0% | |
| CCGTTAGCCATTGTGTGACA+TGG | - | chr5.4:2121632-2121651 | MS.gene024874:intron | 50.0% | |
| CTAAAAAAGGCGGGGACATG+AGG | + | chr5.4:2121933-2121952 | None:intergenic | 50.0% | |
| GGGTTACAAGCTAACAAGGC+AGG | - | chr5.4:2126210-2126229 | MS.gene024874:intron | 50.0% | |
| GGTAAGTAAACCAGGTTCCG+TGG | - | chr5.4:2121332-2121351 | MS.gene024874:intron | 50.0% | |
| GGTGAAGCCATGTCACACAA+TGG | + | chr5.4:2121642-2121661 | None:intergenic | 50.0% | |
| GTTGCTTCCTTTGCGGTTTC+TGG | - | chr5.4:2121697-2121716 | MS.gene024874:intron | 50.0% | |
| TATTGGTCCTTCTGTCCGAG+AGG | + | chr5.4:2126272-2126291 | None:intergenic | 50.0% | |
| TGAGGGCGAATCGAACCTAA+AGG | + | chr5.4:2125305-2125324 | None:intergenic | 50.0% | |
| TGGAACCGTTGCTTCCTTTG+CGG | - | chr5.4:2121690-2121709 | MS.gene024874:intron | 50.0% | |
| ! | ATGCCACTGACTACCAGATC+AGG | + | chr5.4:2121860-2121879 | None:intergenic | 50.0% |
| ! | GAGAGCTTTGGTTGAATCCC+TGG | - | chr5.4:2121267-2121286 | MS.gene024874:CDS | 50.0% |
| ! | GTGGGTTGAGTTTCCACCAT+TGG | - | chr5.4:2123752-2123771 | MS.gene024874:intron | 50.0% |
| ! | GTTAGGAGATACGCTTGGTG+TGG | + | chr5.4:2122783-2122802 | None:intergenic | 50.0% |
| ! | GTTTACTCAGGCACTGTAGC+TGG | - | chr5.4:2122254-2122273 | MS.gene024874:intron | 50.0% |
| ! | TGCTCCTGGTTTGAGAGCTT+TGG | - | chr5.4:2121255-2121274 | MS.gene024874:CDS | 50.0% |
| !! | GATGATGGTATCGATGCTCC+TGG | - | chr5.4:2121241-2121260 | MS.gene024874:CDS | 50.0% |
| AAAAAGGCGGGGACATGAGG+AGG | + | chr5.4:2121930-2121949 | None:intergenic | 55.0% | |
| AAGAGGAGGCGAGGAGGATT+AGG | + | chr5.4:2126632-2126651 | None:intergenic | 55.0% | |
| CAAGTCACCTCTCGGACAGA+AGG | - | chr5.4:2126262-2126281 | MS.gene024874:CDS | 55.0% | |
| CATTAGGGAAAGAGGAGGCG+AGG | + | chr5.4:2126641-2126660 | None:intergenic | 55.0% | |
| CCGGCTGATTGCACTTCTCT+CGG | - | chr5.4:2121806-2121825 | MS.gene024874:CDS | 55.0% | |
| GATGGAGGCAAGTCACCTCT+CGG | - | chr5.4:2126254-2126273 | MS.gene024874:CDS | 55.0% | |
| GCAGCAAGAGCAAAGTCGTG+TGG | + | chr5.4:2125981-2126000 | None:intergenic | 55.0% | |
| GTATCCTGAAGGGGATTCGC+CGG | + | chr5.4:2122732-2122751 | None:intergenic | 55.0% | |
| TGGGGGCGAATCGAACCTAA+AGG | + | chr5.4:2122675-2122694 | None:intergenic | 55.0% | |
| ! | CCGAGAGAAGTGCAATCAGC+CGG | + | chr5.4:2121809-2121828 | None:intergenic | 55.0% |
| ! | TCTTGCTGGTCTCTCTCGTG+CGG | - | chr5.4:2126855-2126874 | MS.gene024874:CDS | 55.0% |
| AGCTTCCGACGAGAGGGGTT+TGG | + | chr5.4:2126926-2126945 | None:intergenic | 60.0% | |
| ATGACCGGCGAATCCCCTTC+AGG | - | chr5.4:2122725-2122744 | MS.gene024874:intron | 60.0% | |
| CACTGTAGCTGGAGCTCGAG+AGG | - | chr5.4:2122265-2122284 | MS.gene024874:intron | 60.0% | |
| CTTCCGACGAGAGGGGTTTG+GGG | + | chr5.4:2126924-2126943 | None:intergenic | 60.0% | |
| GCACGAGAGAGACCAGCAAG+AGG | + | chr5.4:2126856-2126875 | None:intergenic | 60.0% | |
| GCTTCCGACGAGAGGGGTTT+GGG | + | chr5.4:2126925-2126944 | None:intergenic | 60.0% | |
| GGCCGCTTCACGGAGTTCAA+GGG | + | chr5.4:2123510-2123529 | None:intergenic | 60.0% | |
| TAGGGAAAGAGGAGGCGAGG+AGG | + | chr5.4:2126638-2126657 | None:intergenic | 60.0% | |
| TGGCCGCTTCACGGAGTTCA+AGG | + | chr5.4:2123511-2123530 | None:intergenic | 60.0% | |
| TGTCCCCAAACCCCTCTCGT+CGG | - | chr5.4:2126918-2126937 | MS.gene024874:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 2121202 | 2126951 | 2121202 | ID=MS.gene024874 |
| chr5.4 | mRNA | 2121202 | 2126951 | 2121202 | ID=MS.gene024874.t1;Parent=MS.gene024874 |
| chr5.4 | exon | 2126821 | 2126951 | 2126821 | ID=MS.gene024874.t1.exon1;Parent=MS.gene024874.t1 |
| chr5.4 | CDS | 2126821 | 2126951 | 2126821 | ID=cds.MS.gene024874.t1;Parent=MS.gene024874.t1 |
| chr5.4 | exon | 2126435 | 2126532 | 2126435 | ID=MS.gene024874.t1.exon2;Parent=MS.gene024874.t1 |
| chr5.4 | CDS | 2126435 | 2126532 | 2126435 | ID=cds.MS.gene024874.t1;Parent=MS.gene024874.t1 |
| chr5.4 | exon | 2126244 | 2126352 | 2126244 | ID=MS.gene024874.t1.exon3;Parent=MS.gene024874.t1 |
| chr5.4 | CDS | 2126244 | 2126352 | 2126244 | ID=cds.MS.gene024874.t1;Parent=MS.gene024874.t1 |
| chr5.4 | exon | 2125823 | 2125900 | 2125823 | ID=MS.gene024874.t1.exon4;Parent=MS.gene024874.t1 |
| chr5.4 | CDS | 2125823 | 2125900 | 2125823 | ID=cds.MS.gene024874.t1;Parent=MS.gene024874.t1 |
| chr5.4 | exon | 2122041 | 2122194 | 2122041 | ID=MS.gene024874.t1.exon5;Parent=MS.gene024874.t1 |
| chr5.4 | CDS | 2122041 | 2122194 | 2122041 | ID=cds.MS.gene024874.t1;Parent=MS.gene024874.t1 |
| chr5.4 | exon | 2121769 | 2121942 | 2121769 | ID=MS.gene024874.t1.exon6;Parent=MS.gene024874.t1 |
| chr5.4 | CDS | 2121769 | 2121942 | 2121769 | ID=cds.MS.gene024874.t1;Parent=MS.gene024874.t1 |
| chr5.4 | exon | 2121394 | 2121459 | 2121394 | ID=MS.gene024874.t1.exon7;Parent=MS.gene024874.t1 |
| chr5.4 | CDS | 2121394 | 2121459 | 2121394 | ID=cds.MS.gene024874.t1;Parent=MS.gene024874.t1 |
| chr5.4 | exon | 2121202 | 2121312 | 2121202 | ID=MS.gene024874.t1.exon8;Parent=MS.gene024874.t1 |
| chr5.4 | CDS | 2121202 | 2121312 | 2121202 | ID=cds.MS.gene024874.t1;Parent=MS.gene024874.t1 |
| Gene Sequence |
| Protein sequence |
