Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene025202.t1 | AFK46072.1 | 87.1 | 326 | 41 | 1 | 1 | 325 | 1 | 326 | 1.10E-153 | 552.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene025202.t1 | Q9SAH9 | 43.1 | 320 | 170 | 5 | 9 | 322 | 4 | 317 | 3.2e-61 | 236.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene025202.t1 | I3T0N0 | 87.1 | 326 | 41 | 1 | 1 | 325 | 1 | 326 | 7.9e-154 | 552.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene63037 | MS.gene025202 | PPI |
MS.gene053809 | MS.gene025202 | PPI |
MS.gene65685 | MS.gene025202 | PPI |
MS.gene96654 | MS.gene025202 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene025202.t1 | MTR_4g009040 | 93.252 | 326 | 21 | 1 | 1 | 325 | 1 | 326 | 0.0 | 621 |
MS.gene025202.t1 | MTR_4g009040 | 92.121 | 330 | 21 | 2 | 1 | 325 | 1 | 330 | 0.0 | 616 |
MS.gene025202.t1 | MTR_4g009690 | 92.593 | 324 | 24 | 0 | 1 | 324 | 1 | 324 | 0.0 | 593 |
MS.gene025202.t1 | MTR_4g009690 | 92.308 | 325 | 24 | 1 | 1 | 324 | 1 | 325 | 0.0 | 588 |
MS.gene025202.t1 | MTR_4g006940 | 45.231 | 325 | 168 | 4 | 3 | 322 | 7 | 326 | 4.51e-85 | 259 |
MS.gene025202.t1 | MTR_2g104960 | 46.984 | 315 | 157 | 4 | 13 | 322 | 20 | 329 | 2.93e-83 | 255 |
MS.gene025202.t1 | MTR_5g072620 | 41.562 | 320 | 178 | 4 | 10 | 322 | 2 | 319 | 1.39e-80 | 248 |
MS.gene025202.t1 | MTR_4g077100 | 43.038 | 316 | 169 | 7 | 11 | 318 | 9 | 321 | 5.01e-79 | 244 |
MS.gene025202.t1 | MTR_4g006940 | 47.842 | 278 | 139 | 3 | 3 | 279 | 7 | 279 | 1.06e-77 | 239 |
MS.gene025202.t1 | MTR_4g006940 | 47.842 | 278 | 139 | 3 | 3 | 279 | 7 | 279 | 1.06e-77 | 239 |
MS.gene025202.t1 | MTR_2g101330 | 41.433 | 321 | 177 | 5 | 12 | 324 | 4 | 321 | 2.65e-77 | 239 |
MS.gene025202.t1 | MTR_8g062440 | 43.302 | 321 | 170 | 8 | 11 | 323 | 6 | 322 | 5.67e-77 | 239 |
MS.gene025202.t1 | MTR_4g077130 | 42.633 | 319 | 172 | 7 | 8 | 318 | 4 | 319 | 9.60e-77 | 238 |
MS.gene025202.t1 | MTR_3g005170 | 41.875 | 320 | 177 | 6 | 6 | 318 | 3 | 320 | 1.15e-76 | 238 |
MS.gene025202.t1 | MTR_3g005210 | 42.271 | 317 | 174 | 6 | 9 | 318 | 2 | 316 | 1.64e-76 | 237 |
MS.gene025202.t1 | MTR_8g062440 | 43.478 | 322 | 169 | 9 | 11 | 323 | 6 | 323 | 4.24e-76 | 236 |
MS.gene025202.t1 | MTR_4g077100 | 44.485 | 272 | 145 | 5 | 11 | 278 | 9 | 278 | 8.53e-73 | 226 |
MS.gene025202.t1 | MTR_8g062110 | 42.902 | 317 | 169 | 8 | 10 | 318 | 6 | 318 | 2.45e-72 | 227 |
MS.gene025202.t1 | MTR_8g062110 | 42.902 | 317 | 169 | 8 | 10 | 318 | 15 | 327 | 3.45e-72 | 227 |
MS.gene025202.t1 | MTR_3g031650 | 39.623 | 318 | 187 | 3 | 10 | 322 | 2 | 319 | 5.64e-72 | 226 |
MS.gene025202.t1 | MTR_3g005170 | 42.960 | 277 | 152 | 5 | 6 | 278 | 3 | 277 | 2.14e-70 | 220 |
MS.gene025202.t1 | MTR_8g062440 | 45.318 | 267 | 139 | 6 | 11 | 273 | 6 | 269 | 3.72e-69 | 219 |
MS.gene025202.t1 | MTR_2g028620 | 40.244 | 328 | 185 | 6 | 5 | 323 | 2 | 327 | 1.37e-68 | 218 |
MS.gene025202.t1 | MTR_8g062110 | 43.542 | 271 | 146 | 6 | 10 | 276 | 6 | 273 | 1.47e-65 | 208 |
MS.gene025202.t1 | MTR_8g062110 | 42.160 | 287 | 152 | 7 | 10 | 292 | 6 | 282 | 1.50e-65 | 208 |
MS.gene025202.t1 | MTR_5g056600 | 36.250 | 320 | 192 | 6 | 12 | 322 | 3 | 319 | 1.67e-65 | 209 |
MS.gene025202.t1 | MTR_3g031650 | 40.299 | 268 | 158 | 2 | 10 | 275 | 2 | 269 | 2.21e-65 | 207 |
MS.gene025202.t1 | MTR_1g022440 | 37.690 | 329 | 189 | 11 | 5 | 322 | 2 | 325 | 6.78e-65 | 208 |
MS.gene025202.t1 | MTR_3g005170 | 38.438 | 320 | 157 | 6 | 6 | 318 | 3 | 289 | 1.56e-64 | 206 |
MS.gene025202.t1 | MTR_2g028620 | 42.960 | 277 | 150 | 5 | 5 | 275 | 2 | 276 | 1.47e-63 | 204 |
MS.gene025202.t1 | MTR_1g022445 | 36.760 | 321 | 189 | 9 | 13 | 322 | 8 | 325 | 8.64e-62 | 200 |
MS.gene025202.t1 | MTR_4g092080 | 39.275 | 331 | 176 | 10 | 11 | 321 | 12 | 337 | 6.57e-59 | 192 |
MS.gene025202.t1 | MTR_7g074880 | 35.604 | 323 | 193 | 8 | 12 | 322 | 7 | 326 | 1.20e-51 | 173 |
MS.gene025202.t1 | MTR_4g081440 | 34.670 | 349 | 198 | 12 | 1 | 324 | 8 | 351 | 1.33e-51 | 174 |
MS.gene025202.t1 | MTR_4g081440 | 34.195 | 348 | 202 | 11 | 1 | 324 | 12 | 356 | 1.45e-50 | 171 |
MS.gene025202.t1 | MTR_7g074820 | 35.890 | 326 | 191 | 9 | 12 | 322 | 7 | 329 | 2.38e-50 | 170 |
MS.gene025202.t1 | MTR_7g074730 | 34.462 | 325 | 196 | 9 | 12 | 322 | 7 | 328 | 1.93e-49 | 168 |
MS.gene025202.t1 | MTR_7g074850 | 34.356 | 326 | 196 | 10 | 12 | 322 | 7 | 329 | 3.66e-46 | 159 |
MS.gene025202.t1 | MTR_7g074710 | 34.259 | 324 | 196 | 11 | 12 | 322 | 7 | 326 | 4.39e-44 | 154 |
MS.gene025202.t1 | MTR_4g023730 | 34.835 | 333 | 193 | 11 | 8 | 322 | 3 | 329 | 1.50e-41 | 147 |
MS.gene025202.t1 | MTR_8g062710 | 73.404 | 94 | 15 | 1 | 12 | 105 | 19 | 102 | 9.37e-40 | 136 |
MS.gene025202.t1 | MTR_8g062110 | 37.118 | 229 | 134 | 6 | 101 | 322 | 11 | 236 | 1.49e-37 | 134 |
MS.gene025202.t1 | MTR_0164s0070 | 53.543 | 127 | 57 | 2 | 12 | 136 | 4 | 130 | 9.83e-37 | 131 |
MS.gene025202.t1 | MTR_5g029990 | 31.922 | 307 | 170 | 9 | 13 | 302 | 12 | 296 | 4.96e-35 | 129 |
MS.gene025202.t1 | MTR_7g074870 | 33.803 | 284 | 169 | 9 | 52 | 322 | 11 | 288 | 7.10e-34 | 126 |
MS.gene025202.t1 | MTR_6g406250 | 31.939 | 263 | 169 | 5 | 13 | 268 | 55 | 314 | 1.43e-31 | 121 |
MS.gene025202.t1 | MTR_8g062110 | 37.430 | 179 | 107 | 4 | 101 | 276 | 11 | 187 | 4.61e-31 | 115 |
MS.gene025202.t1 | MTR_8g062708 | 77.941 | 68 | 15 | 0 | 213 | 280 | 1 | 68 | 6.95e-30 | 110 |
MS.gene025202.t1 | MTR_2g013230 | 29.651 | 344 | 199 | 12 | 12 | 322 | 7 | 340 | 7.36e-29 | 114 |
MS.gene025202.t1 | MTR_2g013250 | 29.565 | 345 | 194 | 13 | 12 | 320 | 6 | 337 | 2.38e-26 | 107 |
MS.gene025202.t1 | MTR_6g406250 | 32.984 | 191 | 124 | 2 | 13 | 199 | 55 | 245 | 1.73e-25 | 103 |
MS.gene025202.t1 | MTR_0685s0030 | 33.544 | 158 | 100 | 2 | 165 | 318 | 2 | 158 | 9.92e-24 | 95.9 |
MS.gene025202.t1 | MTR_7g117190 | 29.592 | 294 | 169 | 12 | 12 | 275 | 6 | 291 | 1.20e-23 | 99.0 |
MS.gene025202.t1 | MTR_7g117190 | 29.373 | 303 | 174 | 13 | 12 | 283 | 6 | 299 | 1.52e-23 | 99.4 |
MS.gene025202.t1 | MTR_2g013260 | 29.032 | 341 | 201 | 13 | 12 | 320 | 7 | 338 | 7.77e-20 | 89.4 |
MS.gene025202.t1 | MTR_2g013260 | 38.411 | 151 | 80 | 7 | 12 | 154 | 7 | 152 | 1.71e-18 | 84.7 |
MS.gene025202.t1 | MTR_0685s0030 | 33.333 | 114 | 76 | 0 | 165 | 278 | 2 | 115 | 6.95e-18 | 78.6 |
MS.gene025202.t1 | MTR_3g011130 | 35.897 | 117 | 70 | 4 | 104 | 216 | 30 | 145 | 1.25e-14 | 70.5 |
MS.gene025202.t1 | MTR_3g101500 | 30.435 | 253 | 149 | 11 | 11 | 256 | 2 | 234 | 3.05e-14 | 72.8 |
MS.gene025202.t1 | MTR_3g101500 | 30.435 | 253 | 149 | 11 | 11 | 256 | 2 | 234 | 3.17e-14 | 72.4 |
MS.gene025202.t1 | MTR_3g101500 | 31.771 | 192 | 108 | 9 | 11 | 199 | 2 | 173 | 2.23e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene025202.t1 | AT2G33590 | 61.661 | 313 | 118 | 2 | 12 | 322 | 8 | 320 | 3.56e-138 | 394 |
MS.gene025202.t1 | AT2G33600 | 59.248 | 319 | 128 | 2 | 6 | 322 | 2 | 320 | 8.04e-129 | 370 |
MS.gene025202.t1 | AT1G76470 | 54.829 | 321 | 139 | 3 | 11 | 325 | 5 | 325 | 3.59e-112 | 328 |
MS.gene025202.t1 | AT1G09510 | 47.516 | 322 | 160 | 6 | 8 | 322 | 3 | 322 | 2.93e-86 | 262 |
MS.gene025202.t1 | AT1G51410 | 44.785 | 326 | 169 | 7 | 6 | 323 | 2 | 324 | 1.77e-85 | 260 |
MS.gene025202.t1 | AT5G19440 | 43.636 | 330 | 174 | 7 | 1 | 323 | 1 | 325 | 3.99e-82 | 252 |
MS.gene025202.t1 | AT1G80820 | 45.312 | 320 | 163 | 5 | 9 | 322 | 4 | 317 | 1.63e-81 | 251 |
MS.gene025202.t1 | AT1G09490 | 42.138 | 318 | 177 | 5 | 11 | 322 | 6 | 322 | 1.61e-77 | 240 |
MS.gene025202.t1 | AT1G15950 | 44.340 | 318 | 167 | 4 | 10 | 322 | 10 | 322 | 8.80e-77 | 239 |
MS.gene025202.t1 | AT1G15950 | 44.340 | 318 | 167 | 4 | 10 | 322 | 10 | 322 | 8.80e-77 | 239 |
MS.gene025202.t1 | AT1G66800 | 44.828 | 319 | 163 | 7 | 11 | 322 | 6 | 318 | 8.69e-76 | 235 |
MS.gene025202.t1 | AT1G09480 | 42.453 | 318 | 176 | 5 | 11 | 322 | 6 | 322 | 2.26e-75 | 234 |
MS.gene025202.t1 | AT1G09500 | 42.724 | 323 | 177 | 5 | 8 | 322 | 3 | 325 | 3.46e-75 | 234 |
MS.gene025202.t1 | AT1G09480 | 41.945 | 329 | 182 | 6 | 2 | 322 | 42 | 369 | 6.32e-75 | 235 |
MS.gene025202.t1 | AT5G58490 | 41.587 | 315 | 179 | 3 | 13 | 322 | 9 | 323 | 6.86e-75 | 233 |
MS.gene025202.t1 | AT1G80820 | 48.162 | 272 | 135 | 3 | 9 | 279 | 4 | 270 | 1.41e-74 | 231 |
MS.gene025202.t1 | AT4G35420 | 40.867 | 323 | 175 | 7 | 12 | 324 | 7 | 323 | 1.20e-73 | 230 |
MS.gene025202.t1 | AT1G15950 | 44.156 | 308 | 162 | 4 | 10 | 312 | 10 | 312 | 1.49e-73 | 230 |
MS.gene025202.t1 | AT2G02400 | 38.801 | 317 | 183 | 6 | 13 | 322 | 6 | 318 | 2.87e-73 | 229 |
MS.gene025202.t1 | AT1G15950 | 47.464 | 276 | 139 | 3 | 10 | 284 | 10 | 280 | 4.17e-73 | 227 |
MS.gene025202.t1 | AT1G15950 | 47.985 | 273 | 136 | 3 | 10 | 281 | 10 | 277 | 4.27e-73 | 228 |
MS.gene025202.t1 | AT1G09500 | 45.926 | 270 | 143 | 3 | 8 | 274 | 3 | 272 | 1.32e-72 | 226 |
MS.gene025202.t1 | AT1G15950 | 47.970 | 271 | 135 | 3 | 10 | 279 | 10 | 275 | 7.11e-72 | 224 |
MS.gene025202.t1 | AT5G42800 | 39.024 | 328 | 184 | 10 | 7 | 322 | 2 | 325 | 3.58e-63 | 205 |
MS.gene025202.t1 | AT1G09490 | 39.643 | 280 | 163 | 4 | 48 | 322 | 13 | 291 | 8.90e-61 | 196 |
MS.gene025202.t1 | AT1G09500 | 41.135 | 282 | 159 | 4 | 48 | 322 | 10 | 291 | 3.97e-58 | 189 |
MS.gene025202.t1 | AT1G68540 | 34.177 | 316 | 200 | 5 | 15 | 322 | 6 | 321 | 6.82e-54 | 179 |
MS.gene025202.t1 | AT1G25460 | 34.286 | 315 | 199 | 5 | 15 | 322 | 6 | 319 | 1.50e-53 | 178 |
MS.gene025202.t1 | AT2G45400 | 36.036 | 333 | 182 | 11 | 13 | 322 | 40 | 364 | 1.11e-50 | 172 |
MS.gene025202.t1 | AT4G27250 | 34.024 | 338 | 192 | 9 | 1 | 311 | 1 | 334 | 2.01e-48 | 166 |
MS.gene025202.t1 | AT4G27250 | 34.043 | 329 | 194 | 9 | 1 | 311 | 1 | 324 | 2.98e-48 | 165 |
MS.gene025202.t1 | AT1G61720 | 34.211 | 342 | 204 | 11 | 1 | 324 | 1 | 339 | 1.22e-46 | 161 |
MS.gene025202.t1 | AT2G45400 | 36.620 | 284 | 157 | 8 | 13 | 279 | 40 | 317 | 1.04e-44 | 155 |
MS.gene025202.t1 | AT2G23910 | 32.971 | 276 | 166 | 7 | 14 | 281 | 11 | 275 | 3.27e-43 | 150 |
MS.gene025202.t1 | AT2G23910 | 33.210 | 271 | 159 | 7 | 14 | 273 | 11 | 270 | 7.69e-43 | 149 |
MS.gene025202.t1 | AT2G23910 | 33.210 | 271 | 159 | 7 | 14 | 273 | 11 | 270 | 1.56e-42 | 149 |
MS.gene025202.t1 | AT4G30470 | 34.074 | 270 | 157 | 7 | 14 | 273 | 11 | 269 | 9.45e-40 | 142 |
MS.gene025202.t1 | AT1G15950 | 40.000 | 225 | 128 | 3 | 104 | 322 | 1 | 224 | 1.94e-39 | 139 |
MS.gene025202.t1 | AT2G45400 | 33.438 | 317 | 180 | 12 | 27 | 322 | 1 | 307 | 5.26e-39 | 140 |
MS.gene025202.t1 | AT2G45400 | 39.726 | 219 | 115 | 6 | 13 | 218 | 40 | 254 | 4.06e-36 | 131 |
MS.gene025202.t1 | AT2G23910 | 32.479 | 234 | 137 | 6 | 50 | 273 | 14 | 236 | 2.04e-32 | 122 |
MS.gene025202.t1 | AT1G68540 | 32.367 | 207 | 135 | 3 | 121 | 322 | 8 | 214 | 1.51e-30 | 115 |
MS.gene025202.t1 | AT5G14700 | 32.967 | 273 | 165 | 8 | 9 | 268 | 51 | 318 | 2.43e-28 | 113 |
MS.gene025202.t1 | AT5G14700 | 31.944 | 216 | 135 | 5 | 9 | 214 | 51 | 264 | 1.22e-22 | 95.9 |
MS.gene025202.t1 | AT4G33360 | 27.344 | 256 | 155 | 10 | 10 | 256 | 12 | 245 | 9.06e-16 | 77.0 |
MS.gene025202.t1 | AT4G33360 | 27.344 | 256 | 155 | 10 | 10 | 256 | 12 | 245 | 1.19e-15 | 77.0 |
MS.gene025202.t1 | AT4G33360 | 27.165 | 254 | 154 | 10 | 12 | 256 | 2 | 233 | 6.76e-15 | 74.7 |
Find 65 sgRNAs with CRISPR-Local
Find 180 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATTTGTCCTACTCTTGTTT+TGG | 0.177937 | 2.2:+46572684 | MS.gene025202:CDS |
TCATCAATCGCTTTATCTTT+TGG | 0.244785 | 2.2:-46572353 | None:intergenic |
CTCAGAGAAACTGCAAAGTT+TGG | 0.267800 | 2.2:+46574023 | MS.gene025202:CDS |
AAAGTTTGGGTTGGAATTTC+AGG | 0.268144 | 2.2:+46574037 | MS.gene025202:CDS |
TTCAGCAAGTGTTCATATTT+CGG | 0.273006 | 2.2:-46571858 | None:intergenic |
AATAAGAAGGTGTGTGTAAC+TGG | 0.296410 | 2.2:+46570660 | MS.gene025202:CDS |
ATATGAACACTTGCTGAAAC+TGG | 0.306288 | 2.2:+46571863 | MS.gene025202:CDS |
TTTGCGGTTGACTGTAAAAT+TGG | 0.328927 | 2.2:-46572709 | None:intergenic |
CTGAATTTCGCGAAAAGAAC+TGG | 0.329580 | 2.2:+46572646 | MS.gene025202:CDS |
TTCGTAGGGTACTTGTAGTT+TGG | 0.336746 | 2.2:-46573448 | None:intergenic |
GCTCTTCAAAGCAGATATCT+TGG | 0.340288 | 2.2:+46571908 | MS.gene025202:CDS |
CTGTTCTTCTGCTTCTGTCT+TGG | 0.343397 | 2.2:-46572620 | None:intergenic |
TATCTGCTTTGAAGAGCTTA+AGG | 0.348799 | 2.2:-46571902 | None:intergenic |
CATTGGAGAATAAGCTTTGT+TGG | 0.352362 | 2.2:+46573293 | MS.gene025202:CDS |
CGTAGTTGATGCAATACTTT+CGG | 0.367768 | 2.2:+46573333 | MS.gene025202:CDS |
CAAGACAGAAGCAGAAGAAC+AGG | 0.371007 | 2.2:+46572621 | MS.gene025202:CDS |
CACTATCGAGACACGAGATT+TGG | 0.373994 | 2.2:+46573402 | MS.gene025202:CDS |
AGAAACGTTACCTCGGGATT+AGG | 0.376697 | 2.2:-46572011 | None:intergenic |
TGATTCTGTTGAGAGCTATA+AGG | 0.382480 | 2.2:+46574080 | MS.gene025202:CDS |
CTTAGAAGGCCATGACTCAT+TGG | 0.391769 | 2.2:+46573276 | MS.gene025202:intron |
TCAGTTTACGCTGCAATTGT+TGG | 0.392704 | 2.2:+46571939 | MS.gene025202:CDS |
AACCAAGCTACTTGAATTTG+CGG | 0.392881 | 2.2:-46572725 | None:intergenic |
TCAGAGAAACTGCAAAGTTT+GGG | 0.410030 | 2.2:+46574024 | MS.gene025202:CDS |
TCCATGGACAAAGTAACCTT+TGG | 0.412376 | 2.2:-46570727 | None:intergenic |
GAAAATGAAGCTTACTTCGT+AGG | 0.425779 | 2.2:-46573463 | None:intergenic |
GGGTTGGAATTTCAGGCCAT+TGG | 0.441671 | 2.2:+46574044 | MS.gene025202:CDS |
AAGCGATTGATGAGTCTTGT+TGG | 0.452091 | 2.2:+46572363 | MS.gene025202:CDS |
TCCAAAGGTTACTTTGTCCA+TGG | 0.474794 | 2.2:+46570726 | MS.gene025202:CDS |
CATGGAACTGTTAGAGAACC+TGG | 0.480190 | 2.2:+46570744 | MS.gene025202:CDS |
GAGATTTGGTGGAGAAATTG+AGG | 0.494019 | 2.2:+46573416 | MS.gene025202:CDS |
CAAAACAAGAGTAGGACAAA+TGG | 0.495861 | 2.2:-46572683 | None:intergenic |
TTAGCAGTTCCCTTCACTGC+AGG | 0.496393 | 2.2:-46572245 | None:intergenic |
AAGGTGTGTGTAACTGGAGC+AGG | 0.505575 | 2.2:+46570666 | MS.gene025202:CDS |
CAGGAGGGTTTGTAGCATCA+TGG | 0.506329 | 2.2:+46570685 | MS.gene025202:CDS |
AACCGCAAATTCAAGTAGCT+TGG | 0.506503 | 2.2:+46572723 | MS.gene025202:CDS |
TATCGAGACACGAGATTTGG+TGG | 0.511530 | 2.2:+46573405 | MS.gene025202:CDS |
GGATTAGGTACAACTGTTGA+AGG | 0.512345 | 2.2:-46571996 | None:intergenic |
AAAATGAAGCTTACTTCGTA+GGG | 0.514933 | 2.2:-46573462 | None:intergenic |
AGAAACTGCAAAGTTTGGGT+TGG | 0.515747 | 2.2:+46574028 | MS.gene025202:CDS |
TTGGAATTTCAGGCCATTGG+AGG | 0.517528 | 2.2:+46574047 | MS.gene025202:CDS |
GGTACAACTGTTGAAGGTAC+CGG | 0.517543 | 2.2:-46571990 | None:intergenic |
GTTGAGAGCTATAAGGAGGC+TGG | 0.522498 | 2.2:+46574087 | MS.gene025202:CDS |
TATGAGAATCACAAGGCAGA+TGG | 0.526023 | 2.2:+46573358 | MS.gene025202:CDS |
TCAATAAGTGTTTCCTCCAA+TGG | 0.530835 | 2.2:-46574060 | None:intergenic |
GTTAAACTTCTCCTTTCCAA+AGG | 0.537463 | 2.2:+46570711 | MS.gene025202:CDS |
CAGGTTCTCTAACAGTTCCA+TGG | 0.559703 | 2.2:-46570743 | None:intergenic |
GAGGAGAAAATGGAAACAAG+TGG | 0.561006 | 2.2:+46570624 | None:intergenic |
TGCTGACAGCTATATTGAGA+TGG | 0.567912 | 2.2:+46573981 | MS.gene025202:intron |
GTGATTGAGCCTGCAGTGAA+GGG | 0.570026 | 2.2:+46572236 | MS.gene025202:CDS |
ATTGGTCCCAAAACAAGAGT+AGG | 0.572490 | 2.2:-46572691 | None:intergenic |
AGGAGAAAATGGAAACAAGT+GGG | 0.578026 | 2.2:+46570625 | None:intergenic |
GAGTGTTAATAACAATAAGA+AGG | 0.578284 | 2.2:+46570647 | MS.gene025202:CDS |
ATGAGAATCACAAGGCAGAT+GGG | 0.578597 | 2.2:+46573359 | MS.gene025202:CDS |
GTGTGTGTAACTGGAGCAGG+AGG | 0.579894 | 2.2:+46570669 | MS.gene025202:CDS |
AGTGATTGAGCCTGCAGTGA+AGG | 0.582476 | 2.2:+46572235 | MS.gene025202:CDS |
AAGGTACCGGGCTAGCAACA+TGG | 0.584108 | 2.2:-46571977 | None:intergenic |
GTACAACTGTTGAAGGTACC+GGG | 0.591956 | 2.2:-46571989 | None:intergenic |
GGACAAAGTAACCTTTGGAA+AGG | 0.613225 | 2.2:-46570722 | None:intergenic |
GCTTATTCTCCAATGAGTCA+TGG | 0.616079 | 2.2:-46573285 | None:intergenic |
TTCTGTTGAGAGCTATAAGG+AGG | 0.627623 | 2.2:+46574083 | MS.gene025202:CDS |
AGCTTGTCTCAAAGCTAATG+TGG | 0.639403 | 2.2:+46572277 | MS.gene025202:CDS |
AACAGTTGTACCTAATCCCG+AGG | 0.656125 | 2.2:+46572001 | MS.gene025202:CDS |
GAAAAGAACTGGACTTAACG+TGG | 0.670351 | 2.2:+46572657 | MS.gene025202:CDS |
TTCGGCTTATGAGAATCACA+AGG | 0.712543 | 2.2:+46573351 | MS.gene025202:CDS |
TGTGTGTAACTGGAGCAGGA+GGG | 0.744318 | 2.2:+46570670 | MS.gene025202:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATATATATATATATTTAT+TGG | - | chr2.2:46571229-46571248 | None:intergenic | 0.0% |
!! | AATTTGAAAACAAAATATAA+AGG | - | chr2.2:46571395-46571414 | None:intergenic | 10.0% |
!! | ATTTGAAAACAAAATATAAA+GGG | - | chr2.2:46571394-46571413 | None:intergenic | 10.0% |
!!! | AAAGAATAAAAAGTTTTTTT+GGG | + | chr2.2:46571286-46571305 | MS.gene025202:intron | 10.0% |
!!! | ATTATTTAGTTTATGTTATA+AGG | + | chr2.2:46571688-46571707 | MS.gene025202:intron | 10.0% |
!! | AAAATATTTAAATTTAGAGG+TGG | - | chr2.2:46573508-46573527 | None:intergenic | 15.0% |
!! | AAATAGTATACTAAGAAATA+TGG | - | chr2.2:46571742-46571761 | None:intergenic | 15.0% |
!! | AAATATTTAAATTTAGAGGT+GGG | - | chr2.2:46573507-46573526 | None:intergenic | 15.0% |
!! | AAGAATTTCATTACTATATA+TGG | + | chr2.2:46570914-46570933 | MS.gene025202:intron | 15.0% |
!! | AGAATTAATTAAAAATGTCT+TGG | + | chr2.2:46570812-46570831 | MS.gene025202:intron | 15.0% |
!! | CTGAAAATATTTAAATTTAG+AGG | - | chr2.2:46573511-46573530 | None:intergenic | 15.0% |
!! | TGAAATTAGTTAAATTATAC+TGG | - | chr2.2:46573203-46573222 | None:intergenic | 15.0% |
!!! | AAACTTTTTATTCTTTGTAT+CGG | - | chr2.2:46571282-46571301 | None:intergenic | 15.0% |
!!! | CAAAGAATAAAAAGTTTTTT+TGG | + | chr2.2:46571285-46571304 | MS.gene025202:intron | 15.0% |
!! | ATCATATGATTCATATCTTA+AGG | - | chr2.2:46572467-46572486 | None:intergenic | 20.0% |
!! | TAACTTCTATATAAAATCCT+TGG | + | chr2.2:46572874-46572893 | MS.gene025202:intron | 20.0% |
!! | TAATTAAGCAGTATATGTAA+AGG | + | chr2.2:46573617-46573636 | MS.gene025202:intron | 20.0% |
!! | TACATATACTGCTTAATTAA+TGG | - | chr2.2:46573616-46573635 | None:intergenic | 20.0% |
!!! | AAATTGAAGAAAGTTTTGAT+TGG | + | chr2.2:46571472-46571491 | MS.gene025202:intron | 20.0% |
!!! | ACTTTTAACATCAAAAACAT+AGG | + | chr2.2:46571194-46571213 | MS.gene025202:intron | 20.0% |
!!! | CTTTATCTTTTGGTAAATTA+GGG | - | chr2.2:46572346-46572365 | None:intergenic | 20.0% |
!!! | GATTTTATATAGAAGTTATG+TGG | - | chr2.2:46572872-46572891 | None:intergenic | 20.0% |
!!! | TCTGTTTTTCAAATTATCAT+TGG | + | chr2.2:46573866-46573885 | MS.gene025202:intron | 20.0% |
! | AATGATCATGTTAGTAAACA+CGG | + | chr2.2:46572153-46572172 | MS.gene025202:intron | 25.0% |
! | ACTATATATGGAAAGAAACA+AGG | + | chr2.2:46570926-46570945 | MS.gene025202:intron | 25.0% |
! | AGTCATTTACTACAATTTGT+AGG | - | chr2.2:46571552-46571571 | None:intergenic | 25.0% |
! | ATTCAATTGTCTTTCTTAGA+AGG | + | chr2.2:46573262-46573281 | MS.gene025202:intron | 25.0% |
! | CATATACAAGTATAACATGT+TGG | - | chr2.2:46571625-46571644 | None:intergenic | 25.0% |
! | CATTATCATGTAAAACAACA+AGG | - | chr2.2:46572845-46572864 | None:intergenic | 25.0% |
! | GAGAAGTCTAAACAAATTTA+TGG | + | chr2.2:46570988-46571007 | MS.gene025202:intron | 25.0% |
! | GAGTGTTAATAACAATAAGA+AGG | + | chr2.2:46570647-46570666 | MS.gene025202:CDS | 25.0% |
! | GTTGTAATAAGAACTTGATA+AGG | - | chr2.2:46572785-46572804 | None:intergenic | 25.0% |
! | TGTAACCATCAAATCTATAT+AGG | - | chr2.2:46573939-46573958 | None:intergenic | 25.0% |
!! | ACACTTTCAACGTAAATTTT+CGG | - | chr2.2:46573795-46573814 | None:intergenic | 25.0% |
!! | GCTTTATCTTTTGGTAAATT+AGG | - | chr2.2:46572347-46572366 | None:intergenic | 25.0% |
!! | GTTCTTGTCAAACTTTTAAA+AGG | + | chr2.2:46572745-46572764 | MS.gene025202:CDS | 25.0% |
!! | TTTTGGCGTCAATATTTATT+TGG | + | chr2.2:46572944-46572963 | MS.gene025202:intron | 25.0% |
!!! | ATTTTAGTCCCTAAAATTGA+AGG | - | chr2.2:46571041-46571060 | None:intergenic | 25.0% |
!!! | GAATTTTAACTCGCATTATA+CGG | - | chr2.2:46572823-46572842 | None:intergenic | 25.0% |
!!! | TCATTTAAACAACTAGCTTT+TGG | - | chr2.2:46571075-46571094 | None:intergenic | 25.0% |
!!! | TTCAATTTTAGGGACTAAAA+TGG | + | chr2.2:46571040-46571059 | MS.gene025202:intron | 25.0% |
AAAATGAAGCTTACTTCGTA+GGG | - | chr2.2:46573465-46573484 | None:intergenic | 30.0% | |
ACTTGATAAGGCATATTAGT+AGG | - | chr2.2:46572773-46572792 | None:intergenic | 30.0% | |
AGACTACTGCAAAAATACTA+AGG | + | chr2.2:46572394-46572413 | MS.gene025202:CDS | 30.0% | |
ATCAGGAAAATTGTTGAGTA+AGG | + | chr2.2:46573683-46573702 | MS.gene025202:intron | 30.0% | |
CTGATAAACTTTCAACTTAC+TGG | - | chr2.2:46572111-46572130 | None:intergenic | 30.0% | |
GAGAGATAAATACTTGTATC+AGG | + | chr2.2:46573666-46573685 | MS.gene025202:intron | 30.0% | |
GTATGGACATACACATATAA+AGG | - | chr2.2:46573055-46573074 | None:intergenic | 30.0% | |
TCATGAATTACGAATATGCT+CGG | + | chr2.2:46573149-46573168 | MS.gene025202:intron | 30.0% | |
TCTCTACTAGAATAACAAGT+TGG | + | chr2.2:46571522-46571541 | MS.gene025202:intron | 30.0% | |
TTCAGCAAGTGTTCATATTT+CGG | - | chr2.2:46571861-46571880 | None:intergenic | 30.0% | |
! | TCATCAATCGCTTTATCTTT+TGG | - | chr2.2:46572356-46572375 | None:intergenic | 30.0% |
! | TGTGATGACCTTCAATTTTA+GGG | + | chr2.2:46571030-46571049 | MS.gene025202:intron | 30.0% |
! | TTGTGATGACCTTCAATTTT+AGG | + | chr2.2:46571029-46571048 | MS.gene025202:intron | 30.0% |
! | TTTTTGTGCATAACAGATTC+AGG | + | chr2.2:46572921-46572940 | MS.gene025202:intron | 30.0% |
!! | AACTTGTTATTCTAGTAGAG+AGG | - | chr2.2:46571523-46571542 | None:intergenic | 30.0% |
!! | TTTTTGAAGAGGTCATATAC+AGG | - | chr2.2:46571434-46571453 | None:intergenic | 30.0% |
!!! | AAAAGTTTTTTTGGGAGTGT+CGG | + | chr2.2:46571294-46571313 | MS.gene025202:intron | 30.0% |
!!! | ATTTGTCCTACTCTTGTTTT+GGG | + | chr2.2:46572685-46572704 | MS.gene025202:CDS | 30.0% |
!!! | CATCTTTTCTCTTTGTTTTG+AGG | + | chr2.2:46571782-46571801 | MS.gene025202:intron | 30.0% |
!!! | TGTCACTTCATACTTTTTCA+TGG | - | chr2.2:46572182-46572201 | None:intergenic | 30.0% |
AAAACACTATAACGGTGAAG+CGG | - | chr2.2:46573084-46573103 | None:intergenic | 35.0% | |
AACATTAGAAACGTTACCTC+GGG | - | chr2.2:46572020-46572039 | None:intergenic | 35.0% | |
AACCAAGCTACTTGAATTTG+CGG | - | chr2.2:46572728-46572747 | None:intergenic | 35.0% | |
ATGAGATGAGAAATAGTACC+AGG | - | chr2.2:46570765-46570784 | None:intergenic | 35.0% | |
ATGGAAAGAAACAAGGCTTA+AGG | + | chr2.2:46570933-46570952 | MS.gene025202:intron | 35.0% | |
ATTGTTGAGTAAGGAGAATG+AGG | + | chr2.2:46573692-46573711 | MS.gene025202:intron | 35.0% | |
CAAAACAAGAGTAGGACAAA+TGG | - | chr2.2:46572686-46572705 | None:intergenic | 35.0% | |
GAAAATGAAGCTTACTTCGT+AGG | - | chr2.2:46573466-46573485 | None:intergenic | 35.0% | |
GAACATTAGAAACGTTACCT+CGG | - | chr2.2:46572021-46572040 | None:intergenic | 35.0% | |
GCTTGCCTATATAGATTTGA+TGG | + | chr2.2:46573931-46573950 | MS.gene025202:intron | 35.0% | |
GTTAAACTTCTCCTTTCCAA+AGG | + | chr2.2:46570711-46570730 | MS.gene025202:CDS | 35.0% | |
TAGCAGATAGTGTAGCTTAA+CGG | - | chr2.2:46573116-46573135 | None:intergenic | 35.0% | |
TCAATAAGTGTTTCCTCCAA+TGG | - | chr2.2:46574063-46574082 | None:intergenic | 35.0% | |
TCAGAGAAACTGCAAAGTTT+GGG | + | chr2.2:46574024-46574043 | MS.gene025202:CDS | 35.0% | |
TGATTCTGTTGAGAGCTATA+AGG | + | chr2.2:46574080-46574099 | MS.gene025202:CDS | 35.0% | |
TTGCAAACAATGTTGTACGA+TGG | + | chr2.2:46573724-46573743 | MS.gene025202:intron | 35.0% | |
TTTGCGGTTGACTGTAAAAT+TGG | - | chr2.2:46572712-46572731 | None:intergenic | 35.0% | |
! | AATAAGAAGGTGTGTGTAAC+TGG | + | chr2.2:46570660-46570679 | MS.gene025202:CDS | 35.0% |
! | ACATGTTGGTCTGTTTAAGA+TGG | - | chr2.2:46571611-46571630 | None:intergenic | 35.0% |
! | AGTTCTTTTCGCGAAATTCA+GGG | - | chr2.2:46572647-46572666 | None:intergenic | 35.0% |
! | ATATGAACACTTGCTGAAAC+TGG | + | chr2.2:46571863-46571882 | MS.gene025202:CDS | 35.0% |
! | CATTGGAGAATAAGCTTTGT+TGG | + | chr2.2:46573293-46573312 | MS.gene025202:CDS | 35.0% |
! | CGTAGTTGATGCAATACTTT+CGG | + | chr2.2:46573333-46573352 | MS.gene025202:CDS | 35.0% |
! | CTACTAGAATAACAAGTTGG+TGG | + | chr2.2:46571525-46571544 | MS.gene025202:intron | 35.0% |
! | CTTCACCGTTATAGTGTTTT+GGG | + | chr2.2:46573084-46573103 | MS.gene025202:intron | 35.0% |
! | TTGGTCTGTTTAAGATGGTT+TGG | - | chr2.2:46571606-46571625 | None:intergenic | 35.0% |
! | TTTTGCAAGTTGCTACGTAT+TGG | - | chr2.2:46571105-46571124 | None:intergenic | 35.0% |
!! | AAAGTTTGGGTTGGAATTTC+AGG | + | chr2.2:46574037-46574056 | MS.gene025202:CDS | 35.0% |
!! | CATTTGTCCTACTCTTGTTT+TGG | + | chr2.2:46572684-46572703 | MS.gene025202:CDS | 35.0% |
!! | TATCTGCTTTGAAGAGCTTA+AGG | - | chr2.2:46571905-46571924 | None:intergenic | 35.0% |
!! | TGCATAACAGATTCAGGTTT+TGG | + | chr2.2:46572927-46572946 | MS.gene025202:intron | 35.0% |
AAACACTATAACGGTGAAGC+GGG | - | chr2.2:46573083-46573102 | None:intergenic | 40.0% | |
AACCGCAAATTCAAGTAGCT+TGG | + | chr2.2:46572723-46572742 | MS.gene025202:CDS | 40.0% | |
AAGAGGTCATATACAGGTCA+TGG | - | chr2.2:46571428-46571447 | None:intergenic | 40.0% | |
AGAAACTGCAAAGTTTGGGT+TGG | + | chr2.2:46574028-46574047 | MS.gene025202:CDS | 40.0% | |
AGCTTGTCTCAAAGCTAATG+TGG | + | chr2.2:46572277-46572296 | MS.gene025202:CDS | 40.0% | |
ATACCTGAAGCTTAATCTGC+AGG | + | chr2.2:46572208-46572227 | MS.gene025202:intron | 40.0% | |
ATGAGAATCACAAGGCAGAT+GGG | + | chr2.2:46573359-46573378 | MS.gene025202:CDS | 40.0% | |
ATTGGTCCCAAAACAAGAGT+AGG | - | chr2.2:46572694-46572713 | None:intergenic | 40.0% | |
CGAAACACTGACAGATTCAA+CGG | - | chr2.2:46573909-46573928 | None:intergenic | 40.0% | |
CGACTCCCAAAACACTATAA+CGG | - | chr2.2:46573092-46573111 | None:intergenic | 40.0% | |
CTCAGAGAAACTGCAAAGTT+TGG | + | chr2.2:46574023-46574042 | MS.gene025202:CDS | 40.0% | |
CTGAATTTCGCGAAAAGAAC+TGG | + | chr2.2:46572646-46572665 | MS.gene025202:CDS | 40.0% | |
GAAAAGAACTGGACTTAACG+TGG | + | chr2.2:46572657-46572676 | MS.gene025202:CDS | 40.0% | |
GCTCTTCAAAGCAGATATCT+TGG | + | chr2.2:46571908-46571927 | MS.gene025202:CDS | 40.0% | |
GCTTATTCTCCAATGAGTCA+TGG | - | chr2.2:46573288-46573307 | None:intergenic | 40.0% | |
GGATTAGGTACAACTGTTGA+AGG | - | chr2.2:46571999-46572018 | None:intergenic | 40.0% | |
GTTATTCTAGTAGAGAGGCT+TGG | - | chr2.2:46571518-46571537 | None:intergenic | 40.0% | |
TATGAGAATCACAAGGCAGA+TGG | + | chr2.2:46573358-46573377 | MS.gene025202:CDS | 40.0% | |
TCAGTTTACGCTGCAATTGT+TGG | + | chr2.2:46571939-46571958 | MS.gene025202:CDS | 40.0% | |
TCATATACAGGTCATGGAGT+TGG | - | chr2.2:46571422-46571441 | None:intergenic | 40.0% | |
TCCATGGACAAAGTAACCTT+TGG | - | chr2.2:46570730-46570749 | None:intergenic | 40.0% | |
TCTCAATATAGCTGTCAGCA+AGG | - | chr2.2:46573981-46574000 | None:intergenic | 40.0% | |
TGCTGACAGCTATATTGAGA+TGG | + | chr2.2:46573981-46574000 | MS.gene025202:intron | 40.0% | |
TGTCCTACGATGGTCATAAA+TGG | - | chr2.2:46571155-46571174 | None:intergenic | 40.0% | |
TTCGGCTTATGAGAATCACA+AGG | + | chr2.2:46573351-46573370 | MS.gene025202:CDS | 40.0% | |
TTCTGTTGAGAGCTATAAGG+AGG | + | chr2.2:46574083-46574102 | MS.gene025202:CDS | 40.0% | |
TTGAGTAAGGAGAATGAGGA+AGG | + | chr2.2:46573696-46573715 | MS.gene025202:intron | 40.0% | |
! | AAGCGATTGATGAGTCTTGT+TGG | + | chr2.2:46572363-46572382 | MS.gene025202:CDS | 40.0% |
! | CAGTTCTTTTCGCGAAATTC+AGG | - | chr2.2:46572648-46572667 | None:intergenic | 40.0% |
! | GCTTCACCGTTATAGTGTTT+TGG | + | chr2.2:46573083-46573102 | MS.gene025202:intron | 40.0% |
! | GGACAAAGTAACCTTTGGAA+AGG | - | chr2.2:46570725-46570744 | None:intergenic | 40.0% |
! | TCCAAAGGTTACTTTGTCCA+TGG | + | chr2.2:46570726-46570745 | MS.gene025202:CDS | 40.0% |
! | TTCGTAGGGTACTTGTAGTT+TGG | - | chr2.2:46573451-46573470 | None:intergenic | 40.0% |
!! | GAGATTTGGTGGAGAAATTG+AGG | + | chr2.2:46573416-46573435 | MS.gene025202:CDS | 40.0% |
!! | TGCTGAGCAGATTTTTGAAG+AGG | - | chr2.2:46571445-46571464 | None:intergenic | 40.0% |
!!! | CGTTATAGTGTTTTGGGAGT+CGG | + | chr2.2:46573090-46573109 | MS.gene025202:intron | 40.0% |
!!! | TGGTTCTAGTTTTGCCTTCA+TGG | + | chr2.2:46572075-46572094 | MS.gene025202:intron | 40.0% |
AACAGTTGTACCTAATCCCG+AGG | + | chr2.2:46572001-46572020 | MS.gene025202:CDS | 45.0% | |
AAGGCAAAACTAGAACCACG+CGG | - | chr2.2:46572073-46572092 | None:intergenic | 45.0% | |
AATCCTTGGTCGTGTAACAG+TGG | + | chr2.2:46572888-46572907 | MS.gene025202:intron | 45.0% | |
ACTGACAGATTCAACGGACA+CGG | - | chr2.2:46573903-46573922 | None:intergenic | 45.0% | |
AGAAACGTTACCTCGGGATT+AGG | - | chr2.2:46572014-46572033 | None:intergenic | 45.0% | |
CAAGACAGAAGCAGAAGAAC+AGG | + | chr2.2:46572621-46572640 | MS.gene025202:CDS | 45.0% | |
CACTATCGAGACACGAGATT+TGG | + | chr2.2:46573402-46573421 | MS.gene025202:CDS | 45.0% | |
CAGGTTCTCTAACAGTTCCA+TGG | - | chr2.2:46570746-46570765 | None:intergenic | 45.0% | |
CATGGAACTGTTAGAGAACC+TGG | + | chr2.2:46570744-46570763 | MS.gene025202:CDS | 45.0% | |
CCTACGATGGTCATAAATGG+AGG | - | chr2.2:46571152-46571171 | None:intergenic | 45.0% | |
CCTCCATTTATGACCATCGT+AGG | + | chr2.2:46571149-46571168 | MS.gene025202:intron | 45.0% | |
CTGTTCTTCTGCTTCTGTCT+TGG | - | chr2.2:46572623-46572642 | None:intergenic | 45.0% | |
CTTAGAAGGCCATGACTCAT+TGG | + | chr2.2:46573276-46573295 | MS.gene025202:intron | 45.0% | |
TAACTTGATATGTCACCGCG+TGG | + | chr2.2:46572055-46572074 | MS.gene025202:intron | 45.0% | |
TATCGAGACACGAGATTTGG+TGG | + | chr2.2:46573405-46573424 | MS.gene025202:CDS | 45.0% | |
TATGAAGCATAGACGCCTCA+GGG | - | chr2.2:46571351-46571370 | None:intergenic | 45.0% | |
TCTGTGTCAATGTCCTACGA+TGG | - | chr2.2:46571165-46571184 | None:intergenic | 45.0% | |
TGTCAGTGTCATGTCAATGC+CGG | - | chr2.2:46573827-46573846 | None:intergenic | 45.0% | |
TTGGAATTTCAGGCCATTGG+AGG | + | chr2.2:46574047-46574066 | MS.gene025202:CDS | 45.0% | |
! | AGTTTTCCATGTTGCTAGCC+CGG | + | chr2.2:46571971-46571990 | MS.gene025202:CDS | 45.0% |
! | CTGGTGTCTTTTCACCATGA+AGG | - | chr2.2:46572092-46572111 | None:intergenic | 45.0% |
! | GGTACAACTGTTGAAGGTAC+CGG | - | chr2.2:46571993-46572012 | None:intergenic | 45.0% |
! | GTCTATGTGTTGACACGAGT+CGG | - | chr2.2:46571321-46571340 | None:intergenic | 45.0% |
! | TTGAAAGTGTGTCCCTTGTC+CGG | + | chr2.2:46573805-46573824 | MS.gene025202:intron | 45.0% |
!! | GTACAACTGTTGAAGGTACC+GGG | - | chr2.2:46571992-46572011 | None:intergenic | 45.0% |
!! | TGGCATAAGAGTACCAGTTC+TGG | - | chr2.2:46572603-46572622 | None:intergenic | 45.0% |
!! | AAAAAAAATTGAAAATTAAT+AGG | - | chr2.2:46570792-46570811 | None:intergenic | 5.0% |
AAGGTGTGTGTAACTGGAGC+AGG | + | chr2.2:46570666-46570685 | MS.gene025202:CDS | 50.0% | |
ACATAGACGCCAAATCCCTG+AGG | + | chr2.2:46571333-46571352 | MS.gene025202:intron | 50.0% | |
AGTGATTGAGCCTGCAGTGA+AGG | + | chr2.2:46572235-46572254 | MS.gene025202:CDS | 50.0% | |
CAGGAGGGTTTGTAGCATCA+TGG | + | chr2.2:46570685-46570704 | MS.gene025202:CDS | 50.0% | |
CCACCTGCAGATTAAGCTTC+AGG | - | chr2.2:46572214-46572233 | None:intergenic | 50.0% | |
CCTGAAGCTTAATCTGCAGG+TGG | + | chr2.2:46572211-46572230 | MS.gene025202:intron | 50.0% | |
CTATGAAGCATAGACGCCTC+AGG | - | chr2.2:46571352-46571371 | None:intergenic | 50.0% | |
CTGACAGATTCAACGGACAC+GGG | - | chr2.2:46573902-46573921 | None:intergenic | 50.0% | |
CTTCGCATGTGATCCAGAAC+TGG | + | chr2.2:46572587-46572606 | MS.gene025202:intron | 50.0% | |
GGGTTGGAATTTCAGGCCAT+TGG | + | chr2.2:46574044-46574063 | MS.gene025202:CDS | 50.0% | |
GTCATGTCAATGCCGGACAA+GGG | - | chr2.2:46573820-46573839 | None:intergenic | 50.0% | |
GTGATTGAGCCTGCAGTGAA+GGG | + | chr2.2:46572236-46572255 | MS.gene025202:CDS | 50.0% | |
GTTGAGAGCTATAAGGAGGC+TGG | + | chr2.2:46574087-46574106 | MS.gene025202:CDS | 50.0% | |
TATAACGGTGAAGCGGGTAG+TGG | - | chr2.2:46573077-46573096 | None:intergenic | 50.0% | |
TGTCATGTCAATGCCGGACA+AGG | - | chr2.2:46573821-46573840 | None:intergenic | 50.0% | |
TGTGTGTAACTGGAGCAGGA+GGG | + | chr2.2:46570670-46570689 | MS.gene025202:CDS | 50.0% | |
TTAGCAGTTCCCTTCACTGC+AGG | - | chr2.2:46572248-46572267 | None:intergenic | 50.0% | |
TTCGGACTACCTGCAGTTGT+CGG | - | chr2.2:46571843-46571862 | None:intergenic | 50.0% | |
ACGCCACTGTTACACGACCA+AGG | - | chr2.2:46572894-46572913 | None:intergenic | 55.0% | |
AGCGTATGTCCGACAACTGC+AGG | + | chr2.2:46571831-46571850 | MS.gene025202:intron | 55.0% | |
GCATAGACGCCTCAGGGATT+TGG | - | chr2.2:46571345-46571364 | None:intergenic | 55.0% | |
GTGTGTGTAACTGGAGCAGG+AGG | + | chr2.2:46570669-46570688 | MS.gene025202:CDS | 55.0% | |
!! | AAGGTACCGGGCTAGCAACA+TGG | - | chr2.2:46571980-46571999 | None:intergenic | 55.0% |
! | CGGTGAAGCGGGTAGTGGTA+TGG | - | chr2.2:46573072-46573091 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 46570633 | 46574128 | 46570633 | ID=MS.gene025202 |
chr2.2 | mRNA | 46570633 | 46574128 | 46570633 | ID=MS.gene025202.t1;Parent=MS.gene025202 |
chr2.2 | exon | 46570633 | 46570765 | 46570633 | ID=MS.gene025202.t1.exon1;Parent=MS.gene025202.t1 |
chr2.2 | CDS | 46570633 | 46570765 | 46570633 | ID=cds.MS.gene025202.t1;Parent=MS.gene025202.t1 |
chr2.2 | exon | 46571853 | 46572022 | 46571853 | ID=MS.gene025202.t1.exon2;Parent=MS.gene025202.t1 |
chr2.2 | CDS | 46571853 | 46572022 | 46571853 | ID=cds.MS.gene025202.t1;Parent=MS.gene025202.t1 |
chr2.2 | exon | 46572230 | 46572415 | 46572230 | ID=MS.gene025202.t1.exon3;Parent=MS.gene025202.t1 |
chr2.2 | CDS | 46572230 | 46572415 | 46572230 | ID=cds.MS.gene025202.t1;Parent=MS.gene025202.t1 |
chr2.2 | exon | 46572604 | 46572766 | 46572604 | ID=MS.gene025202.t1.exon4;Parent=MS.gene025202.t1 |
chr2.2 | CDS | 46572604 | 46572766 | 46572604 | ID=cds.MS.gene025202.t1;Parent=MS.gene025202.t1 |
chr2.2 | exon | 46573284 | 46573470 | 46573284 | ID=MS.gene025202.t1.exon5;Parent=MS.gene025202.t1 |
chr2.2 | CDS | 46573284 | 46573470 | 46573284 | ID=cds.MS.gene025202.t1;Parent=MS.gene025202.t1 |
chr2.2 | exon | 46573990 | 46574128 | 46573990 | ID=MS.gene025202.t1.exon6;Parent=MS.gene025202.t1 |
chr2.2 | CDS | 46573990 | 46574128 | 46573990 | ID=cds.MS.gene025202.t1;Parent=MS.gene025202.t1 |
Gene Sequence |
Protein sequence |