Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63037.t1 | XP_003614640.1 | 96.9 | 319 | 10 | 0 | 1 | 319 | 1 | 319 | 4.30E-179 | 637.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63037.t1 | Q9CA28 | 73.8 | 321 | 82 | 1 | 1 | 319 | 1 | 321 | 1.5e-140 | 500.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63037.t1 | G7K1K4 | 96.9 | 319 | 10 | 0 | 1 | 319 | 1 | 319 | 3.1e-179 | 637.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene034112 | MS.gene63037 | PPI |
| MS.gene026725 | MS.gene63037 | PPI |
| MS.gene058751 | MS.gene63037 | PPI |
| MS.gene63037 | MS.gene025202 | PPI |
| MS.gene058752 | MS.gene63037 | PPI |
| MS.gene63037 | MS.gene009245 | PPI |
| MS.gene070664 | MS.gene63037 | PPI |
| MS.gene50831 | MS.gene63037 | PPI |
| MS.gene50853 | MS.gene63037 | PPI |
| MS.gene50852 | MS.gene63037 | PPI |
| MS.gene034132 | MS.gene63037 | PPI |
| MS.gene64416 | MS.gene63037 | PPI |
| MS.gene63037 | MS.gene026777 | PPI |
| MS.gene63037 | MS.gene50830 | PPI |
| MS.gene25300 | MS.gene63037 | PPI |
| MS.gene63037 | MS.gene053310 | PPI |
| MS.gene63037 | MS.gene38288 | PPI |
| MS.gene051177 | MS.gene63037 | PPI |
| MS.gene60224 | MS.gene63037 | PPI |
| MS.gene63037 | MS.gene37657 | PPI |
| MS.gene37641 | MS.gene63037 | PPI |
| MS.gene63037 | MS.gene053124 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63037.t1 | MTR_5g056600 | 96.865 | 319 | 10 | 0 | 1 | 319 | 1 | 319 | 0.0 | 653 |
| MS.gene63037.t1 | MTR_3g005210 | 41.325 | 317 | 181 | 5 | 5 | 319 | 7 | 320 | 4.14e-86 | 262 |
| MS.gene63037.t1 | MTR_3g005170 | 41.009 | 317 | 180 | 6 | 5 | 318 | 11 | 323 | 1.83e-83 | 255 |
| MS.gene63037.t1 | MTR_2g101330 | 41.956 | 317 | 179 | 4 | 5 | 319 | 6 | 319 | 3.38e-83 | 254 |
| MS.gene63037.t1 | MTR_8g062440 | 41.693 | 319 | 176 | 6 | 5 | 319 | 9 | 321 | 4.38e-83 | 254 |
| MS.gene63037.t1 | MTR_8g062110 | 43.038 | 316 | 170 | 6 | 5 | 316 | 10 | 319 | 1.23e-82 | 253 |
| MS.gene63037.t1 | MTR_8g062110 | 43.038 | 316 | 170 | 6 | 5 | 316 | 19 | 328 | 2.22e-82 | 253 |
| MS.gene63037.t1 | MTR_8g062440 | 41.562 | 320 | 176 | 7 | 5 | 319 | 9 | 322 | 3.99e-81 | 249 |
| MS.gene63037.t1 | MTR_3g005170 | 45.113 | 266 | 140 | 5 | 5 | 267 | 11 | 273 | 1.92e-79 | 243 |
| MS.gene63037.t1 | MTR_8g062440 | 43.003 | 293 | 162 | 4 | 5 | 295 | 9 | 298 | 5.85e-77 | 238 |
| MS.gene63037.t1 | MTR_8g062110 | 46.067 | 267 | 135 | 5 | 5 | 267 | 10 | 271 | 9.26e-77 | 236 |
| MS.gene63037.t1 | MTR_8g062110 | 46.067 | 267 | 135 | 5 | 5 | 267 | 10 | 271 | 1.28e-76 | 236 |
| MS.gene63037.t1 | MTR_2g104960 | 43.082 | 318 | 171 | 7 | 4 | 319 | 20 | 329 | 4.30e-76 | 237 |
| MS.gene63037.t1 | MTR_4g006940 | 41.772 | 316 | 176 | 5 | 5 | 319 | 18 | 326 | 1.17e-73 | 230 |
| MS.gene63037.t1 | MTR_1g022440 | 38.125 | 320 | 190 | 6 | 5 | 319 | 9 | 325 | 1.81e-73 | 230 |
| MS.gene63037.t1 | MTR_4g077130 | 39.557 | 316 | 186 | 5 | 5 | 318 | 10 | 322 | 5.13e-72 | 226 |
| MS.gene63037.t1 | MTR_1g022445 | 38.438 | 320 | 189 | 6 | 5 | 319 | 9 | 325 | 5.33e-72 | 226 |
| MS.gene63037.t1 | MTR_4g077100 | 39.748 | 317 | 184 | 6 | 5 | 318 | 12 | 324 | 1.73e-71 | 224 |
| MS.gene63037.t1 | MTR_5g072620 | 38.125 | 320 | 187 | 5 | 5 | 319 | 6 | 319 | 1.82e-70 | 221 |
| MS.gene63037.t1 | MTR_3g005170 | 35.759 | 316 | 167 | 5 | 5 | 318 | 11 | 292 | 2.07e-67 | 213 |
| MS.gene63037.t1 | MTR_4g009040 | 36.137 | 321 | 196 | 5 | 3 | 319 | 12 | 327 | 2.24e-67 | 214 |
| MS.gene63037.t1 | MTR_4g006940 | 44.238 | 269 | 144 | 3 | 5 | 273 | 18 | 280 | 1.69e-66 | 210 |
| MS.gene63037.t1 | MTR_4g006940 | 44.238 | 269 | 144 | 3 | 5 | 273 | 18 | 280 | 1.69e-66 | 210 |
| MS.gene63037.t1 | MTR_4g009040 | 35.938 | 320 | 194 | 5 | 3 | 319 | 12 | 323 | 2.16e-66 | 211 |
| MS.gene63037.t1 | MTR_4g077100 | 42.105 | 266 | 148 | 5 | 5 | 267 | 12 | 274 | 5.09e-66 | 209 |
| MS.gene63037.t1 | MTR_7g074880 | 35.404 | 322 | 197 | 7 | 5 | 319 | 9 | 326 | 6.72e-65 | 207 |
| MS.gene63037.t1 | MTR_3g031650 | 33.228 | 316 | 208 | 3 | 5 | 319 | 6 | 319 | 7.39e-63 | 202 |
| MS.gene63037.t1 | MTR_3g031650 | 35.985 | 264 | 169 | 0 | 5 | 268 | 6 | 269 | 3.26e-60 | 194 |
| MS.gene63037.t1 | MTR_7g074730 | 35.802 | 324 | 195 | 9 | 5 | 319 | 9 | 328 | 6.29e-60 | 195 |
| MS.gene63037.t1 | MTR_7g074820 | 36.615 | 325 | 192 | 8 | 5 | 319 | 9 | 329 | 1.05e-59 | 194 |
| MS.gene63037.t1 | MTR_4g081440 | 36.905 | 336 | 189 | 8 | 3 | 319 | 23 | 354 | 1.16e-58 | 192 |
| MS.gene63037.t1 | MTR_4g009690 | 34.385 | 317 | 203 | 3 | 3 | 319 | 12 | 323 | 1.83e-58 | 191 |
| MS.gene63037.t1 | MTR_4g081440 | 36.607 | 336 | 189 | 8 | 3 | 319 | 19 | 349 | 2.42e-58 | 191 |
| MS.gene63037.t1 | MTR_4g009690 | 34.700 | 317 | 201 | 4 | 3 | 319 | 12 | 322 | 2.98e-58 | 190 |
| MS.gene63037.t1 | MTR_7g074850 | 33.846 | 325 | 201 | 8 | 5 | 319 | 9 | 329 | 2.03e-54 | 181 |
| MS.gene63037.t1 | MTR_7g074710 | 32.722 | 327 | 199 | 7 | 5 | 319 | 9 | 326 | 4.37e-52 | 174 |
| MS.gene63037.t1 | MTR_4g092080 | 31.402 | 328 | 204 | 9 | 5 | 317 | 15 | 336 | 1.85e-51 | 173 |
| MS.gene63037.t1 | MTR_2g028620 | 31.153 | 321 | 210 | 5 | 5 | 319 | 11 | 326 | 3.56e-47 | 162 |
| MS.gene63037.t1 | MTR_2g028620 | 33.948 | 271 | 169 | 4 | 5 | 269 | 11 | 277 | 1.11e-45 | 157 |
| MS.gene63037.t1 | MTR_7g074870 | 32.414 | 290 | 186 | 6 | 36 | 319 | 3 | 288 | 1.13e-45 | 157 |
| MS.gene63037.t1 | MTR_8g062110 | 36.797 | 231 | 137 | 5 | 93 | 319 | 11 | 236 | 1.24e-45 | 155 |
| MS.gene63037.t1 | MTR_4g023730 | 31.173 | 324 | 211 | 7 | 5 | 319 | 9 | 329 | 1.74e-43 | 152 |
| MS.gene63037.t1 | MTR_8g062110 | 40.223 | 179 | 99 | 4 | 93 | 267 | 11 | 185 | 9.92e-40 | 138 |
| MS.gene63037.t1 | MTR_2g013250 | 28.487 | 337 | 210 | 8 | 5 | 317 | 8 | 337 | 1.21e-34 | 129 |
| MS.gene63037.t1 | MTR_2g013230 | 28.739 | 341 | 208 | 10 | 5 | 319 | 9 | 340 | 5.77e-33 | 124 |
| MS.gene63037.t1 | MTR_2g013260 | 27.246 | 345 | 204 | 9 | 5 | 317 | 9 | 338 | 9.45e-30 | 116 |
| MS.gene63037.t1 | MTR_6g406250 | 30.824 | 279 | 176 | 9 | 5 | 274 | 56 | 326 | 3.31e-29 | 115 |
| MS.gene63037.t1 | MTR_0164s0070 | 44.531 | 128 | 70 | 1 | 3 | 129 | 4 | 131 | 7.42e-29 | 110 |
| MS.gene63037.t1 | MTR_5g029990 | 26.000 | 250 | 159 | 7 | 5 | 247 | 13 | 243 | 9.48e-28 | 109 |
| MS.gene63037.t1 | MTR_7g117190 | 27.083 | 336 | 221 | 11 | 5 | 319 | 8 | 340 | 2.26e-27 | 109 |
| MS.gene63037.t1 | MTR_0685s0030 | 34.356 | 163 | 105 | 2 | 156 | 318 | 1 | 161 | 5.02e-26 | 101 |
| MS.gene63037.t1 | MTR_2g013260 | 27.243 | 301 | 174 | 8 | 5 | 273 | 9 | 296 | 1.34e-25 | 103 |
| MS.gene63037.t1 | MTR_6g406250 | 32.227 | 211 | 133 | 6 | 5 | 208 | 56 | 263 | 1.57e-25 | 103 |
| MS.gene63037.t1 | MTR_7g117190 | 28.070 | 285 | 183 | 10 | 5 | 268 | 8 | 291 | 4.79e-24 | 100 |
| MS.gene63037.t1 | MTR_0685s0030 | 37.500 | 112 | 69 | 1 | 156 | 267 | 1 | 111 | 2.07e-20 | 85.5 |
| MS.gene63037.t1 | MTR_3g011130 | 38.793 | 116 | 68 | 3 | 96 | 208 | 30 | 145 | 1.11e-19 | 84.3 |
| MS.gene63037.t1 | MTR_2g013230 | 25.000 | 248 | 152 | 9 | 98 | 319 | 11 | 250 | 3.40e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63037.t1 | AT1G68540 | 73.832 | 321 | 82 | 1 | 1 | 319 | 1 | 321 | 0.0 | 512 |
| MS.gene63037.t1 | AT1G25460 | 64.798 | 321 | 109 | 3 | 1 | 319 | 1 | 319 | 1.43e-154 | 436 |
| MS.gene63037.t1 | AT1G68540 | 73.832 | 214 | 54 | 1 | 108 | 319 | 1 | 214 | 1.82e-121 | 348 |
| MS.gene63037.t1 | AT4G35420 | 48.113 | 318 | 157 | 6 | 5 | 319 | 9 | 321 | 1.24e-98 | 294 |
| MS.gene63037.t1 | AT1G51410 | 41.824 | 318 | 178 | 6 | 5 | 319 | 10 | 323 | 9.54e-86 | 261 |
| MS.gene63037.t1 | AT5G19440 | 41.772 | 316 | 179 | 5 | 5 | 318 | 11 | 323 | 4.77e-83 | 254 |
| MS.gene63037.t1 | AT1G09510 | 41.083 | 314 | 180 | 5 | 5 | 316 | 9 | 319 | 1.13e-76 | 238 |
| MS.gene63037.t1 | AT5G58490 | 37.304 | 319 | 191 | 4 | 5 | 319 | 10 | 323 | 3.03e-70 | 221 |
| MS.gene63037.t1 | AT1G15950 | 40.190 | 316 | 181 | 5 | 5 | 319 | 14 | 322 | 5.57e-69 | 219 |
| MS.gene63037.t1 | AT1G15950 | 40.190 | 316 | 181 | 5 | 5 | 319 | 14 | 322 | 5.57e-69 | 219 |
| MS.gene63037.t1 | AT1G09480 | 37.931 | 319 | 189 | 7 | 5 | 319 | 9 | 322 | 3.34e-68 | 216 |
| MS.gene63037.t1 | AT1G09490 | 37.304 | 319 | 191 | 6 | 5 | 319 | 9 | 322 | 4.38e-68 | 216 |
| MS.gene63037.t1 | AT1G09480 | 37.931 | 319 | 189 | 7 | 5 | 319 | 56 | 369 | 7.99e-68 | 216 |
| MS.gene63037.t1 | AT1G80820 | 38.608 | 316 | 186 | 4 | 5 | 319 | 9 | 317 | 5.53e-66 | 211 |
| MS.gene63037.t1 | AT1G09500 | 35.714 | 322 | 189 | 6 | 5 | 316 | 9 | 322 | 8.64e-66 | 210 |
| MS.gene63037.t1 | AT1G66800 | 38.006 | 321 | 182 | 7 | 5 | 319 | 9 | 318 | 6.77e-65 | 207 |
| MS.gene63037.t1 | AT5G42800 | 37.578 | 322 | 189 | 8 | 5 | 319 | 9 | 325 | 7.39e-65 | 209 |
| MS.gene63037.t1 | AT1G15950 | 39.672 | 305 | 176 | 5 | 5 | 308 | 14 | 311 | 7.11e-64 | 205 |
| MS.gene63037.t1 | AT1G09500 | 39.098 | 266 | 155 | 4 | 5 | 266 | 9 | 271 | 1.73e-63 | 202 |
| MS.gene63037.t1 | AT2G02400 | 31.861 | 317 | 209 | 5 | 5 | 319 | 7 | 318 | 2.83e-61 | 198 |
| MS.gene63037.t1 | AT1G15950 | 41.636 | 269 | 151 | 3 | 5 | 273 | 14 | 276 | 4.61e-61 | 196 |
| MS.gene63037.t1 | AT1G15950 | 41.887 | 265 | 148 | 3 | 5 | 269 | 14 | 272 | 1.06e-60 | 195 |
| MS.gene63037.t1 | AT1G15950 | 41.887 | 265 | 148 | 3 | 5 | 269 | 14 | 272 | 1.87e-60 | 195 |
| MS.gene63037.t1 | AT1G80820 | 39.405 | 269 | 157 | 2 | 5 | 273 | 9 | 271 | 5.27e-57 | 186 |
| MS.gene63037.t1 | AT2G33590 | 35.691 | 311 | 194 | 4 | 5 | 314 | 10 | 315 | 4.46e-56 | 184 |
| MS.gene63037.t1 | AT1G09490 | 35.417 | 288 | 177 | 6 | 36 | 319 | 9 | 291 | 4.12e-54 | 179 |
| MS.gene63037.t1 | AT1G09500 | 34.130 | 293 | 175 | 6 | 34 | 316 | 4 | 288 | 2.34e-53 | 177 |
| MS.gene63037.t1 | AT4G27250 | 32.934 | 334 | 188 | 8 | 4 | 310 | 13 | 337 | 1.07e-51 | 174 |
| MS.gene63037.t1 | AT4G27250 | 33.129 | 326 | 188 | 8 | 4 | 310 | 13 | 327 | 1.12e-51 | 174 |
| MS.gene63037.t1 | AT1G61720 | 33.333 | 330 | 199 | 8 | 5 | 319 | 14 | 337 | 3.49e-50 | 170 |
| MS.gene63037.t1 | AT2G33600 | 35.127 | 316 | 193 | 6 | 3 | 314 | 8 | 315 | 1.14e-49 | 168 |
| MS.gene63037.t1 | AT2G45400 | 32.000 | 325 | 210 | 6 | 5 | 319 | 41 | 364 | 9.07e-48 | 164 |
| MS.gene63037.t1 | AT1G76470 | 33.962 | 318 | 204 | 4 | 5 | 319 | 8 | 322 | 3.82e-47 | 162 |
| MS.gene63037.t1 | AT2G45400 | 33.942 | 274 | 170 | 6 | 5 | 268 | 41 | 313 | 8.42e-44 | 153 |
| MS.gene63037.t1 | AT1G15950 | 35.556 | 225 | 143 | 2 | 96 | 319 | 1 | 224 | 3.15e-40 | 141 |
| MS.gene63037.t1 | AT2G45400 | 29.965 | 287 | 192 | 5 | 41 | 319 | 22 | 307 | 5.31e-35 | 129 |
| MS.gene63037.t1 | AT2G45400 | 34.259 | 216 | 132 | 5 | 5 | 211 | 41 | 255 | 8.10e-31 | 117 |
| MS.gene63037.t1 | AT2G23910 | 26.199 | 271 | 183 | 7 | 5 | 269 | 11 | 270 | 1.26e-30 | 117 |
| MS.gene63037.t1 | AT2G23910 | 26.199 | 271 | 183 | 7 | 5 | 269 | 11 | 270 | 1.44e-30 | 117 |
| MS.gene63037.t1 | AT2G23910 | 26.199 | 271 | 183 | 7 | 5 | 269 | 11 | 270 | 2.49e-30 | 117 |
| MS.gene63037.t1 | AT4G30470 | 26.119 | 268 | 186 | 6 | 5 | 269 | 11 | 269 | 2.00e-27 | 109 |
| MS.gene63037.t1 | AT5G14700 | 28.155 | 309 | 186 | 9 | 5 | 292 | 56 | 349 | 2.56e-27 | 110 |
| MS.gene63037.t1 | AT2G23910 | 27.155 | 232 | 152 | 7 | 44 | 269 | 16 | 236 | 2.01e-25 | 103 |
| MS.gene63037.t1 | AT5G14700 | 30.806 | 211 | 133 | 4 | 5 | 205 | 56 | 263 | 4.13e-23 | 97.1 |
| MS.gene63037.t1 | AT1G47290 | 27.372 | 274 | 165 | 9 | 6 | 265 | 14 | 267 | 1.80e-15 | 76.6 |
| MS.gene63037.t1 | AT1G47290 | 27.372 | 274 | 165 | 9 | 6 | 265 | 14 | 267 | 5.71e-15 | 75.5 |
Find 75 sgRNAs with CRISPR-Local
Find 155 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATCCCAATTGAGTAATTT+TGG | 0.190538 | 5.4:+44815728 | None:intergenic |
| TGTGATTGCTGCCCACTTAT+TGG | 0.200701 | 5.4:-44816010 | MS.gene63037:CDS |
| TTGATTGATCCATGTATAAA+AGG | 0.233674 | 5.4:-44817591 | MS.gene63037:CDS |
| TGCAGGAGTTCAGCACATTC+TGG | 0.245081 | 5.4:+44817565 | None:intergenic |
| TTATAGCGTTTGCAGTATTC+TGG | 0.245242 | 5.4:+44817435 | None:intergenic |
| CACATCGTCGCGGTATCTTA+TGG | 0.246307 | 5.4:+44817497 | None:intergenic |
| GTACGGATAAGAAGGATATT+TGG | 0.250292 | 5.4:+44815903 | None:intergenic |
| AAATTAATTTGCAGATGATT+TGG | 0.284567 | 5.4:-44818416 | MS.gene63037:intron |
| GTTAAAGCCTTATTAGAAAA+AGG | 0.298250 | 5.4:-44818561 | MS.gene63037:CDS |
| GCGTATTATTATCTCCTTCC+TGG | 0.322510 | 5.4:+44815766 | None:intergenic |
| GGTTATCTAACTCAACTAAA+TGG | 0.326690 | 5.4:-44818385 | MS.gene63037:CDS |
| TCCATATGATAACAACATTC+AGG | 0.350735 | 5.4:-44818251 | MS.gene63037:intron |
| TACAAGCCTTCCAGATGCTT+TGG | 0.351209 | 5.4:+44815975 | None:intergenic |
| CACCACCAAAATTACTCAAT+TGG | 0.351966 | 5.4:-44815733 | MS.gene63037:CDS |
| GATATTTGGCCTGAAGCATT+TGG | 0.356020 | 5.4:+44815917 | None:intergenic |
| GTTAACCCCTCTTTCGTTGT+TGG | 0.364774 | 5.4:-44816758 | MS.gene63037:CDS |
| TATGCATATGCAAAGACATT+TGG | 0.375779 | 5.4:-44816833 | MS.gene63037:CDS |
| AGATAATAATACGCATAGTA+TGG | 0.376093 | 5.4:-44815757 | MS.gene63037:CDS |
| TGCTGCCCACTTATTGGCTA+TGG | 0.389523 | 5.4:-44816004 | MS.gene63037:CDS |
| TCAAATCATCCAAATGCTTC+AGG | 0.391082 | 5.4:-44815926 | MS.gene63037:CDS |
| CTCCAATGAGATTCATTAAG+AGG | 0.392826 | 5.4:+44817462 | None:intergenic |
| CTCCTCTTAATGAATCTCAT+TGG | 0.405823 | 5.4:-44817464 | MS.gene63037:CDS |
| ACCACCAAAATTACTCAATT+GGG | 0.407204 | 5.4:-44815732 | MS.gene63037:CDS |
| TGTGTTTGGGTAATCTCCTC+TGG | 0.409767 | 5.4:+44816059 | None:intergenic |
| AGCAATGTGCTGGCTGGCTG+TGG | 0.411341 | 5.4:+44816722 | None:intergenic |
| ACAAGCCTTCCAGATGCTTT+GGG | 0.411818 | 5.4:+44815976 | None:intergenic |
| ACAAAGCCCACTGTTGTGTT+TGG | 0.415550 | 5.4:+44816045 | None:intergenic |
| ATGGAGGATCCCAAAGCATC+TGG | 0.442838 | 5.4:-44815985 | MS.gene63037:CDS |
| ACCTGAATGTTGTTATCATA+TGG | 0.449261 | 5.4:+44818250 | None:intergenic |
| TTGATTTCGTACGGATAAGA+AGG | 0.451640 | 5.4:+44815895 | None:intergenic |
| GCAGGAGTTCAGCACATTCT+GGG | 0.454583 | 5.4:+44817566 | None:intergenic |
| GAGGCAGTGACTGGGGTTGA+TGG | 0.459132 | 5.4:-44818304 | MS.gene63037:CDS |
| GCAGATGATTTGGAGAAGGT+TGG | 0.460715 | 5.4:-44818406 | MS.gene63037:intron |
| GCTGGCTGTGGTGCAAGAAG+TGG | 0.474028 | 5.4:+44816734 | None:intergenic |
| TTAACTTACTTGATTTCGTA+CGG | 0.475496 | 5.4:+44815886 | None:intergenic |
| TTTCATGTTTGCTTTGATGC+AGG | 0.480165 | 5.4:+44817548 | None:intergenic |
| CAAAGCCCACTGTTGTGTTT+GGG | 0.482518 | 5.4:+44816046 | None:intergenic |
| CTACTATAGGTGTAGCAGCC+AGG | 0.490770 | 5.4:-44815784 | MS.gene63037:intron |
| TTGGAGAAAGAGAGGCTTGG+AGG | 0.497549 | 5.4:-44816814 | MS.gene63037:CDS |
| TTTCTAATAAGGCTTTAACT+AGG | 0.507635 | 5.4:+44818565 | None:intergenic |
| TGCCCACTTATTGGCTATGG+AGG | 0.528146 | 5.4:-44816001 | MS.gene63037:CDS |
| ATCATGAGCAATGTGCTGGC+TGG | 0.528309 | 5.4:+44816716 | None:intergenic |
| TGGAGGATTGCAGAGGAAAG+TGG | 0.531373 | 5.4:-44816797 | MS.gene63037:CDS |
| ATCAAAAGCTTTCAAGACAA+AGG | 0.539091 | 5.4:-44815666 | MS.gene63037:CDS |
| ATTTGCAGATGATTTGGAGA+AGG | 0.544790 | 5.4:-44818410 | MS.gene63037:intron |
| GGAAAGTGGGCTTGATCTAG+TGG | 0.545333 | 5.4:-44816783 | MS.gene63037:CDS |
| AAGTGGACCAACAACGAAAG+AGG | 0.547830 | 5.4:+44816751 | None:intergenic |
| TTATCATATGGAACAATCAC+AGG | 0.553452 | 5.4:+44818262 | None:intergenic |
| TATAGGTGTAGCAGCCAGGA+AGG | 0.555272 | 5.4:-44815780 | MS.gene63037:intron |
| CCTCCTGTCACGCAAAACTC+AGG | 0.555398 | 5.4:+44818609 | None:intergenic |
| TAGTATCATGAGCAATGTGC+TGG | 0.557049 | 5.4:+44816712 | None:intergenic |
| TTGGATGATTTGAGACCAGT+GGG | 0.557451 | 5.4:+44815936 | None:intergenic |
| GATCCTCCATAGCCAATAAG+TGG | 0.558490 | 5.4:+44815998 | None:intergenic |
| TTTGCGTGACAGGAGGCACT+GGG | 0.559306 | 5.4:-44818602 | MS.gene63037:CDS |
| AGTGGACCAACAACGAAAGA+GGG | 0.561902 | 5.4:+44816752 | None:intergenic |
| GGAGGATTGCAGAGGAAAGT+GGG | 0.562235 | 5.4:-44816796 | MS.gene63037:CDS |
| AAGCAGATCTGATGGTGGAA+GGG | 0.569525 | 5.4:-44818336 | MS.gene63037:CDS |
| AAAGCAGATCTGATGGTGGA+AGG | 0.575224 | 5.4:-44818337 | MS.gene63037:CDS |
| TTTGGATGATTTGAGACCAG+TGG | 0.578890 | 5.4:+44815935 | None:intergenic |
| CATTTGGAGAAAGAGAGGCT+TGG | 0.585582 | 5.4:-44816817 | MS.gene63037:CDS |
| GTTCAACCACAGTTGCCCAC+TGG | 0.588605 | 5.4:-44815951 | MS.gene63037:CDS |
| AAAGACATTTGGAGAAAGAG+AGG | 0.612889 | 5.4:-44816822 | MS.gene63037:CDS |
| GATTACCCAAACACAACAGT+GGG | 0.612907 | 5.4:-44816051 | MS.gene63037:CDS |
| TTGAGACCAGTGGGCAACTG+TGG | 0.613180 | 5.4:+44815945 | None:intergenic |
| ATGATACTAAGCATCATCAA+AGG | 0.628815 | 5.4:-44816698 | MS.gene63037:intron |
| ATCCTCCATAGCCAATAAGT+GGG | 0.641325 | 5.4:+44815999 | None:intergenic |
| TTTAAAAGCAGATCTGATGG+TGG | 0.645545 | 5.4:-44818341 | MS.gene63037:CDS |
| AAACTTGTTGCACATCGTCG+CGG | 0.647555 | 5.4:+44817487 | None:intergenic |
| AGGATCCCAAAGCATCTGGA+AGG | 0.652190 | 5.4:-44815981 | MS.gene63037:CDS |
| AGAGGCTTGGAGGATTGCAG+AGG | 0.653350 | 5.4:-44816804 | MS.gene63037:CDS |
| AGGACTACAGTAAGAAACCC+AGG | 0.654613 | 5.4:-44818528 | MS.gene63037:intron |
| AATATATTAACAGGTTCCAG+AGG | 0.656466 | 5.4:-44816075 | MS.gene63037:intron |
| GTGGACCAACAACGAAAGAG+GGG | 0.669528 | 5.4:+44816753 | None:intergenic |
| CAAAGCAAACATGAAACGTG+TGG | 0.672424 | 5.4:-44817541 | MS.gene63037:CDS |
| AGATTACCCAAACACAACAG+TGG | 0.691160 | 5.4:-44816052 | MS.gene63037:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTGAGTATTATTTTAAATT+TGG | + | chr5.4:44817114-44817133 | None:intergenic | 10.0% |
| !! | AAATATATTGTCTTTCTATA+TGG | + | chr5.4:44817350-44817369 | None:intergenic | 15.0% |
| !! | CTACAATATAATATATTAAC+AGG | - | chr5.4:44818184-44818203 | MS.gene63037:intron | 15.0% |
| !! | TTTGAGAAATGATATTTATA+CGG | - | chr5.4:44816087-44816106 | MS.gene63037:intron | 15.0% |
| !!! | ATAAAAACTAAGTATTGATA+CGG | + | chr5.4:44816164-44816183 | None:intergenic | 15.0% |
| !!! | TATTGTATGTTTTATCTTAT+AGG | - | chr5.4:44817998-44818017 | MS.gene63037:intron | 15.0% |
| !! | AAATTTGGTTAACTTCAAAA+TGG | + | chr5.4:44817099-44817118 | None:intergenic | 20.0% |
| !! | AATGTACCAATGAAATTAAT+AGG | + | chr5.4:44815791-44815810 | None:intergenic | 20.0% |
| !! | ATCACTAAATATTAATACCT+GGG | + | chr5.4:44815760-44815779 | None:intergenic | 20.0% |
| !! | ATTTAATAATCTAACAAGAG+AGG | - | chr5.4:44816390-44816409 | MS.gene63037:intron | 20.0% |
| !! | GATTGAATTTAAATTACACT+AGG | + | chr5.4:44817390-44817409 | None:intergenic | 20.0% |
| !! | TATCACTAAATATTAATACC+TGG | + | chr5.4:44815761-44815780 | None:intergenic | 20.0% |
| !!! | AAATTAATTTGCAGATGATT+TGG | - | chr5.4:44815852-44815871 | MS.gene63037:intron | 20.0% |
| !!! | ATAAAACCTGTTTTTTACAT+TGG | - | chr5.4:44817136-44817155 | MS.gene63037:intron | 20.0% |
| !!! | GATATTTATACGGTTATTTT+GGG | - | chr5.4:44816097-44816116 | MS.gene63037:intron | 20.0% |
| !!! | TATACTTTCTTTTCTACTAT+AGG | - | chr5.4:44818471-44818490 | MS.gene63037:intron | 20.0% |
| !!! | TGATATTTATACGGTTATTT+TGG | - | chr5.4:44816096-44816115 | MS.gene63037:intron | 20.0% |
| !!! | TTCTTTTTTGAATATGTGTA+AGG | + | chr5.4:44816327-44816346 | None:intergenic | 20.0% |
| !!! | TTTTGATGATAGCAAAATTA+AGG | + | chr5.4:44818442-44818461 | None:intergenic | 20.0% |
| ! | AAAAGACCAATGTAAAAAAC+AGG | + | chr5.4:44817145-44817164 | None:intergenic | 25.0% |
| ! | ACACATCCTATTAATTTCAT+TGG | - | chr5.4:44815782-44815801 | MS.gene63037:intron | 25.0% |
| ! | AGATAATAATACGCATAGTA+TGG | - | chr5.4:44818511-44818530 | MS.gene63037:intron | 25.0% |
| ! | AGCATCATCAATATAACATA+TGG | - | chr5.4:44816618-44816637 | MS.gene63037:intron | 25.0% |
| ! | AGTCATATCAAATTCTTGTT+TGG | - | chr5.4:44816887-44816906 | MS.gene63037:intron | 25.0% |
| ! | ATGAAAACTAATGTGATCAA+TGG | - | chr5.4:44817177-44817196 | MS.gene63037:intron | 25.0% |
| ! | CAAGAATTTGATATGACTTA+AGG | + | chr5.4:44816885-44816904 | None:intergenic | 25.0% |
| ! | GTGATAGAAAATAAAGGAAA+AGG | - | chr5.4:44817885-44817904 | MS.gene63037:intron | 25.0% |
| ! | TATTCAATTACTTGAGAATG+AGG | - | chr5.4:44817941-44817960 | MS.gene63037:intron | 25.0% |
| ! | TGGAAAGTGATAGAAAATAA+AGG | - | chr5.4:44817879-44817898 | MS.gene63037:intron | 25.0% |
| ! | TTAACTTACTTGATTTCGTA+CGG | + | chr5.4:44818385-44818404 | None:intergenic | 25.0% |
| ! | TTGATTGATCCATGTATAAA+AGG | - | chr5.4:44816677-44816696 | MS.gene63037:intron | 25.0% |
| !! | AAATCCCAATTGAGTAATTT+TGG | + | chr5.4:44818543-44818562 | None:intergenic | 25.0% |
| !! | AATTACTTGACCATACATTT+TGG | - | chr5.4:44817244-44817263 | MS.gene63037:intron | 25.0% |
| !! | TATGTGACCTTTTTCTAATA+AGG | + | chr5.4:44815717-44815736 | None:intergenic | 25.0% |
| !! | TGCTATTTGAAATATGTTGT+AGG | - | chr5.4:44816649-44816668 | MS.gene63037:intron | 25.0% |
| !! | TTTCTAATAAGGCTTTAACT+AGG | + | chr5.4:44815706-44815725 | None:intergenic | 25.0% |
| !!! | GTTAAAGCCTTATTAGAAAA+AGG | - | chr5.4:44815707-44815726 | MS.gene63037:CDS | 25.0% |
| !!! | GTTCTAATTAGTTTTAGTGA+AGG | + | chr5.4:44818071-44818090 | None:intergenic | 25.0% |
| !!! | TTAGTTTTAGTGAAGGAAAA+CGG | + | chr5.4:44818064-44818083 | None:intergenic | 25.0% |
| !!! | TTATTTTGCGAAAAAACAAG+TGG | + | chr5.4:44815831-44815850 | None:intergenic | 25.0% |
| !!! | TTGTATTCTAGAGTTTTGTT+TGG | - | chr5.4:44817615-44817634 | MS.gene63037:intron | 25.0% |
| AAACATATAACCTCAAGACT+TGG | - | chr5.4:44817683-44817702 | MS.gene63037:intron | 30.0% | |
| AACATTTCGTCATCCAAAAT+TGG | + | chr5.4:44816971-44816990 | None:intergenic | 30.0% | |
| AATATATTAACAGGTTCCAG+AGG | - | chr5.4:44818193-44818212 | MS.gene63037:intron | 30.0% | |
| ACCACCAAAATTACTCAATT+GGG | - | chr5.4:44818536-44818555 | MS.gene63037:CDS | 30.0% | |
| ACCTGAATGTTGTTATCATA+TGG | + | chr5.4:44816021-44816040 | None:intergenic | 30.0% | |
| AGTAATGTCACATTCTTGTT+TGG | - | chr5.4:44817029-44817048 | MS.gene63037:intron | 30.0% | |
| ATCAAAAGCTTTCAAGACAA+AGG | - | chr5.4:44818602-44818621 | MS.gene63037:CDS | 30.0% | |
| ATGATACTAAGCATCATCAA+AGG | - | chr5.4:44817570-44817589 | MS.gene63037:CDS | 30.0% | |
| ATGTTAGATATTGAATGTGC+AGG | + | chr5.4:44816995-44817014 | None:intergenic | 30.0% | |
| CAAATCTCATTGTTAGCATA+TGG | + | chr5.4:44817751-44817770 | None:intergenic | 30.0% | |
| CAAGCTTGATTCTAAATCTT+TGG | - | chr5.4:44818154-44818173 | MS.gene63037:intron | 30.0% | |
| GGTTATCTAACTCAACTAAA+TGG | - | chr5.4:44815883-44815902 | MS.gene63037:intron | 30.0% | |
| GTCAAGTAATTTGATGTTGA+AGG | + | chr5.4:44817235-44817254 | None:intergenic | 30.0% | |
| TAGAAAAAGGTCACATAGTA+AGG | - | chr5.4:44815720-44815739 | MS.gene63037:CDS | 30.0% | |
| TATGCATATGCAAAGACATT+TGG | - | chr5.4:44817435-44817454 | MS.gene63037:CDS | 30.0% | |
| TCCATATGATAACAACATTC+AGG | - | chr5.4:44816017-44816036 | MS.gene63037:CDS | 30.0% | |
| TTATCATATGGAACAATCAC+AGG | + | chr5.4:44816009-44816028 | None:intergenic | 30.0% | |
| TTGAGTAACAAGAAAACTCA+TGG | - | chr5.4:44817859-44817878 | MS.gene63037:intron | 30.0% | |
| TTGTCTTTCTATATGGATCA+TGG | + | chr5.4:44817343-44817362 | None:intergenic | 30.0% | |
| ! | GAACTACACAAATTTAGAAC+TGG | - | chr5.4:44816939-44816958 | MS.gene63037:intron | 30.0% |
| ! | GATTTGTTCTCCAAATTAGT+TGG | - | chr5.4:44817765-44817784 | MS.gene63037:intron | 30.0% |
| ! | TGTTCAAGACTTTTGAATTG+AGG | + | chr5.4:44818566-44818585 | None:intergenic | 30.0% |
| !! | GATTTTAAAAGCAGATCTGA+TGG | - | chr5.4:44815924-44815943 | MS.gene63037:CDS | 30.0% |
| AAAGACATTTGGAGAAAGAG+AGG | - | chr5.4:44817446-44817465 | MS.gene63037:CDS | 35.0% | |
| ATCTCATTGTTAGCATATGG+AGG | + | chr5.4:44817748-44817767 | None:intergenic | 35.0% | |
| ATTCAAGCCACCAAAATGTA+TGG | + | chr5.4:44817257-44817276 | None:intergenic | 35.0% | |
| ATTGAGATTAGCAGAGTACA+AGG | - | chr5.4:44816474-44816493 | MS.gene63037:intron | 35.0% | |
| ATTTCGTCATCCAAAATTGG+TGG | + | chr5.4:44816968-44816987 | None:intergenic | 35.0% | |
| CACCACCAAAATTACTCAAT+TGG | - | chr5.4:44818535-44818554 | MS.gene63037:CDS | 35.0% | |
| CACTGTCATAGAAGATTGTA+AGG | + | chr5.4:44817968-44817987 | None:intergenic | 35.0% | |
| CTCCAATGAGATTCATTAAG+AGG | + | chr5.4:44816809-44816828 | None:intergenic | 35.0% | |
| CTCCTCTTAATGAATCTCAT+TGG | - | chr5.4:44816804-44816823 | MS.gene63037:CDS | 35.0% | |
| CTTCTATGACAGTGTACATT+AGG | - | chr5.4:44817974-44817993 | MS.gene63037:intron | 35.0% | |
| GATCCAATGACCAACTAATT+TGG | + | chr5.4:44817778-44817797 | None:intergenic | 35.0% | |
| GTACGGATAAGAAGGATATT+TGG | + | chr5.4:44818368-44818387 | None:intergenic | 35.0% | |
| TATTGCTGTCACAAAAGTTG+TGG | - | chr5.4:44816191-44816210 | MS.gene63037:intron | 35.0% | |
| TCAAATCATCCAAATGCTTC+AGG | - | chr5.4:44818342-44818361 | MS.gene63037:CDS | 35.0% | |
| TCTCCAAATTAGTTGGTCAT+TGG | - | chr5.4:44817772-44817791 | MS.gene63037:intron | 35.0% | |
| TTATAGCGTTTGCAGTATTC+TGG | + | chr5.4:44816836-44816855 | None:intergenic | 35.0% | |
| TTGATTTCGTACGGATAAGA+AGG | + | chr5.4:44818376-44818395 | None:intergenic | 35.0% | |
| TTTAAAAGCAGATCTGATGG+TGG | - | chr5.4:44815927-44815946 | MS.gene63037:CDS | 35.0% | |
| TTTCATGTTTGCTTTGATGC+AGG | + | chr5.4:44816723-44816742 | None:intergenic | 35.0% | |
| ! | AGATTTAGAATCAAGCTTGC+TGG | + | chr5.4:44818153-44818172 | None:intergenic | 35.0% |
| ! | ATTTGCAGATGATTTGGAGA+AGG | - | chr5.4:44815858-44815877 | MS.gene63037:intron | 35.0% |
| ! | TACTTGACCATACATTTTGG+TGG | - | chr5.4:44817247-44817266 | MS.gene63037:intron | 35.0% |
| ! | TATAACCTCAAGACTTGGTT+TGG | - | chr5.4:44817688-44817707 | MS.gene63037:intron | 35.0% |
| ! | TCCCAATTGAGTAATTTTGG+TGG | + | chr5.4:44818540-44818559 | None:intergenic | 35.0% |
| ! | TGACTTAAGGCTTTATGAGA+AGG | + | chr5.4:44816872-44816891 | None:intergenic | 35.0% |
| ! | TTCTGGGTTCCTTTTATACA+TGG | + | chr5.4:44816689-44816708 | None:intergenic | 35.0% |
| !! | AGAGGTGTTATTGATAACGA+AGG | - | chr5.4:44816408-44816427 | MS.gene63037:intron | 35.0% |
| !! | TACATTTTGGTGGCTTGAAT+TGG | - | chr5.4:44817257-44817276 | MS.gene63037:intron | 35.0% |
| ACTCACAATTCGTTCGCAAT+AGG | + | chr5.4:44816447-44816466 | None:intergenic | 40.0% | |
| AGATTACCCAAACACAACAG+TGG | - | chr5.4:44818216-44818235 | MS.gene63037:intron | 40.0% | |
| ATCCTCCATAGCCAATAAGT+GGG | + | chr5.4:44818272-44818291 | None:intergenic | 40.0% | |
| CAAAGCAAACATGAAACGTG+TGG | - | chr5.4:44816727-44816746 | MS.gene63037:CDS | 40.0% | |
| GATTACCCAAACACAACAGT+GGG | - | chr5.4:44818217-44818236 | MS.gene63037:intron | 40.0% | |
| GCGTATTATTATCTCCTTCC+TGG | + | chr5.4:44818505-44818524 | None:intergenic | 40.0% | |
| GCTTGTGTTGCAAGTAATTG+TGG | - | chr5.4:44818099-44818118 | MS.gene63037:intron | 40.0% | |
| TACTACCAAACCAAGTCTTG+AGG | + | chr5.4:44817696-44817715 | None:intergenic | 40.0% | |
| TAGCAGAGTACAAGGATTGT+TGG | - | chr5.4:44816482-44816501 | MS.gene63037:intron | 40.0% | |
| TAGTATCATGAGCAATGTGC+TGG | + | chr5.4:44817559-44817578 | None:intergenic | 40.0% | |
| ! | GAACTGGTAACCACCAATTT+TGG | - | chr5.4:44816955-44816974 | MS.gene63037:intron | 40.0% |
| ! | GATATTTGGCCTGAAGCATT+TGG | + | chr5.4:44818354-44818373 | None:intergenic | 40.0% |
| ! | TTGGATGATTTGAGACCAGT+GGG | + | chr5.4:44818335-44818354 | None:intergenic | 40.0% |
| ! | TTTGGATGATTTGAGACCAG+TGG | + | chr5.4:44818336-44818355 | None:intergenic | 40.0% |
| AAGTGGACCAACAACGAAAG+AGG | + | chr5.4:44817520-44817539 | None:intergenic | 45.0% | |
| ACAAAGCCCACTGTTGTGTT+TGG | + | chr5.4:44818226-44818245 | None:intergenic | 45.0% | |
| ACAAGCCTTCCAGATGCTTT+GGG | + | chr5.4:44818295-44818314 | None:intergenic | 45.0% | |
| ACTCGTGAGTTATGCAGCTT+TGG | - | chr5.4:44817412-44817431 | MS.gene63037:intron | 45.0% | |
| AGGACTACAGTAAGAAACCC+AGG | - | chr5.4:44815740-44815759 | MS.gene63037:CDS | 45.0% | |
| AGTGGACCAACAACGAAAGA+GGG | + | chr5.4:44817519-44817538 | None:intergenic | 45.0% | |
| CAAAGCCCACTGTTGTGTTT+GGG | + | chr5.4:44818225-44818244 | None:intergenic | 45.0% | |
| CATTTGGAGAAAGAGAGGCT+TGG | - | chr5.4:44817451-44817470 | MS.gene63037:CDS | 45.0% | |
| GATCCTCCATAGCCAATAAG+TGG | + | chr5.4:44818273-44818292 | None:intergenic | 45.0% | |
| GTTAACCCCTCTTTCGTTGT+TGG | - | chr5.4:44817510-44817529 | MS.gene63037:CDS | 45.0% | |
| TACAAGCCTTCCAGATGCTT+TGG | + | chr5.4:44818296-44818315 | None:intergenic | 45.0% | |
| TGTGATTGCTGCCCACTTAT+TGG | - | chr5.4:44818258-44818277 | MS.gene63037:CDS | 45.0% | |
| TGTGTTTGGGTAATCTCCTC+TGG | + | chr5.4:44818212-44818231 | None:intergenic | 45.0% | |
| ! | GCAGATGATTTGGAGAAGGT+TGG | - | chr5.4:44815862-44815881 | MS.gene63037:intron | 45.0% |
| ! | TTTGAGACCACGAAGTCTGT+TGG | - | chr5.4:44817720-44817739 | MS.gene63037:intron | 45.0% |
| ! | TTTTGATGAGGCAGTGACTG+GGG | - | chr5.4:44815957-44815976 | MS.gene63037:CDS | 45.0% |
| !! | AAACTTGTTGCACATCGTCG+CGG | + | chr5.4:44816784-44816803 | None:intergenic | 45.0% |
| !! | AAAGCAGATCTGATGGTGGA+AGG | - | chr5.4:44815931-44815950 | MS.gene63037:CDS | 45.0% |
| !! | AAGCAGATCTGATGGTGGAA+GGG | - | chr5.4:44815932-44815951 | MS.gene63037:CDS | 45.0% |
| !! | AGTTTTGATGAGGCAGTGAC+TGG | - | chr5.4:44815955-44815974 | MS.gene63037:CDS | 45.0% |
| !! | GTTTTGATGAGGCAGTGACT+GGG | - | chr5.4:44815956-44815975 | MS.gene63037:CDS | 45.0% |
| CACATCGTCGCGGTATCTTA+TGG | + | chr5.4:44816774-44816793 | None:intergenic | 50.0% | |
| CTACTATAGGTGTAGCAGCC+AGG | - | chr5.4:44818484-44818503 | MS.gene63037:intron | 50.0% | |
| GCAGGAGTTCAGCACATTCT+GGG | + | chr5.4:44816705-44816724 | None:intergenic | 50.0% | |
| GGAGGATTGCAGAGGAAAGT+GGG | - | chr5.4:44817472-44817491 | MS.gene63037:CDS | 50.0% | |
| GTGGACCAACAACGAAAGAG+GGG | + | chr5.4:44817518-44817537 | None:intergenic | 50.0% | |
| TATAGGTGTAGCAGCCAGGA+AGG | - | chr5.4:44818488-44818507 | MS.gene63037:intron | 50.0% | |
| TGCAGGAGTTCAGCACATTC+TGG | + | chr5.4:44816706-44816725 | None:intergenic | 50.0% | |
| TGGAGGATTGCAGAGGAAAG+TGG | - | chr5.4:44817471-44817490 | MS.gene63037:CDS | 50.0% | |
| TTGGAGAAAGAGAGGCTTGG+AGG | - | chr5.4:44817454-44817473 | MS.gene63037:CDS | 50.0% | |
| ! | AGGATCCCAAAGCATCTGGA+AGG | - | chr5.4:44818287-44818306 | MS.gene63037:CDS | 50.0% |
| ! | ATCATGAGCAATGTGCTGGC+TGG | + | chr5.4:44817555-44817574 | None:intergenic | 50.0% |
| ! | ATGCCTGAGTTTTGCGTGAC+AGG | - | chr5.4:44815656-44815675 | MS.gene63037:CDS | 50.0% |
| ! | ATGGAGGATCCCAAAGCATC+TGG | - | chr5.4:44818283-44818302 | MS.gene63037:CDS | 50.0% |
| ! | GGAAAGTGGGCTTGATCTAG+TGG | - | chr5.4:44817485-44817504 | MS.gene63037:CDS | 50.0% |
| ! | TGCCCACTTATTGGCTATGG+AGG | - | chr5.4:44818267-44818286 | MS.gene63037:CDS | 50.0% |
| ! | TGCTGCCCACTTATTGGCTA+TGG | - | chr5.4:44818264-44818283 | MS.gene63037:CDS | 50.0% |
| !! | GGTGGAAGGGAGTTTTGATG+AGG | - | chr5.4:44815945-44815964 | MS.gene63037:CDS | 50.0% |
| AGAGGCTTGGAGGATTGCAG+AGG | - | chr5.4:44817464-44817483 | MS.gene63037:CDS | 55.0% | |
| CCTCCTGTCACGCAAAACTC+AGG | + | chr5.4:44815662-44815681 | None:intergenic | 55.0% | |
| GGAGGAACCAACAGACTTCG+TGG | + | chr5.4:44817730-44817749 | None:intergenic | 55.0% | |
| GTTCAACCACAGTTGCCCAC+TGG | - | chr5.4:44818317-44818336 | MS.gene63037:CDS | 55.0% | |
| TTGAGACCAGTGGGCAACTG+TGG | + | chr5.4:44818326-44818345 | None:intergenic | 55.0% | |
| ! | CCTGAGTTTTGCGTGACAGG+AGG | - | chr5.4:44815659-44815678 | MS.gene63037:CDS | 55.0% |
| !! | TTTGCGTGACAGGAGGCACT+GGG | - | chr5.4:44815666-44815685 | MS.gene63037:CDS | 55.0% |
| !! | TTTTGCGTGACAGGAGGCAC+TGG | - | chr5.4:44815665-44815684 | MS.gene63037:CDS | 55.0% |
| GAGGCAGTGACTGGGGTTGA+TGG | - | chr5.4:44815964-44815983 | MS.gene63037:CDS | 60.0% | |
| GCTGGCTGTGGTGCAAGAAG+TGG | + | chr5.4:44817537-44817556 | None:intergenic | 60.0% | |
| !! | AGCAATGTGCTGGCTGGCTG+TGG | + | chr5.4:44817549-44817568 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 44815656 | 44818634 | 44815656 | ID=MS.gene63037 |
| chr5.4 | mRNA | 44815656 | 44818634 | 44815656 | ID=MS.gene63037.t1;Parent=MS.gene63037 |
| chr5.4 | exon | 44818529 | 44818634 | 44818529 | ID=MS.gene63037.t1.exon1;Parent=MS.gene63037.t1 |
| chr5.4 | CDS | 44818529 | 44818634 | 44818529 | ID=cds.MS.gene63037.t1;Parent=MS.gene63037.t1 |
| chr5.4 | exon | 44818252 | 44818424 | 44818252 | ID=MS.gene63037.t1.exon2;Parent=MS.gene63037.t1 |
| chr5.4 | CDS | 44818252 | 44818424 | 44818252 | ID=cds.MS.gene63037.t1;Parent=MS.gene63037.t1 |
| chr5.4 | exon | 44817434 | 44817619 | 44817434 | ID=MS.gene63037.t1.exon3;Parent=MS.gene63037.t1 |
| chr5.4 | CDS | 44817434 | 44817619 | 44817434 | ID=cds.MS.gene63037.t1;Parent=MS.gene63037.t1 |
| chr5.4 | exon | 44816699 | 44816861 | 44816699 | ID=MS.gene63037.t1.exon4;Parent=MS.gene63037.t1 |
| chr5.4 | CDS | 44816699 | 44816861 | 44816699 | ID=cds.MS.gene63037.t1;Parent=MS.gene63037.t1 |
| chr5.4 | exon | 44815895 | 44816084 | 44815895 | ID=MS.gene63037.t1.exon5;Parent=MS.gene63037.t1 |
| chr5.4 | CDS | 44815895 | 44816084 | 44815895 | ID=cds.MS.gene63037.t1;Parent=MS.gene63037.t1 |
| chr5.4 | exon | 44815656 | 44815797 | 44815656 | ID=MS.gene63037.t1.exon6;Parent=MS.gene63037.t1 |
| chr5.4 | CDS | 44815656 | 44815797 | 44815656 | ID=cds.MS.gene63037.t1;Parent=MS.gene63037.t1 |
| Gene Sequence |
| Protein sequence |
