Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026063.t1 | XP_003626390.1 | 98.5 | 959 | 11 | 2 | 1 | 959 | 1 | 956 | 0.00E+00 | 1953.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026063.t1 | Q9FQ04 | 65.8 | 964 | 288 | 15 | 1 | 947 | 1 | 939 | 0.0e+00 | 1235.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026063.t1 | G7L0T7 | 98.5 | 959 | 11 | 2 | 1 | 959 | 1 | 956 | 0.0e+00 | 1953.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene85722 | MS.gene026063 | PPI |
| MS.gene64202 | MS.gene026063 | PPI |
| MS.gene39725 | MS.gene026063 | PPI |
| MS.gene019784 | MS.gene026063 | PPI |
| MS.gene24174 | MS.gene026063 | PPI |
| MS.gene80364 | MS.gene026063 | PPI |
| MS.gene026063 | MS.gene48145 | PPI |
| MS.gene03346 | MS.gene026063 | PPI |
| MS.gene57277 | MS.gene026063 | PPI |
| MS.gene27050 | MS.gene026063 | PPI |
| MS.gene46845 | MS.gene026063 | PPI |
| MS.gene026063 | MS.gene03315 | PPI |
| MS.gene64000 | MS.gene026063 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026063.t1 | MTR_7g114570 | 98.540 | 959 | 11 | 2 | 1 | 959 | 1 | 956 | 0.0 | 1972 |
| MS.gene026063.t1 | MTR_7g114570 | 97.497 | 959 | 10 | 3 | 1 | 959 | 1 | 945 | 0.0 | 1943 |
| MS.gene026063.t1 | MTR_4g051920 | 41.760 | 807 | 302 | 18 | 1 | 730 | 1 | 716 | 0.0 | 580 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026063.t1 | AT1G54490 | 65.907 | 965 | 285 | 17 | 1 | 947 | 1 | 939 | 0.0 | 1219 |
| MS.gene026063.t1 | AT1G54490 | 65.140 | 895 | 269 | 16 | 71 | 947 | 12 | 881 | 0.0 | 1108 |
| MS.gene026063.t1 | AT1G75660 | 68.585 | 417 | 127 | 2 | 1 | 415 | 1 | 415 | 0.0 | 562 |
| MS.gene026063.t1 | AT1G75660 | 52.089 | 359 | 155 | 3 | 439 | 781 | 529 | 886 | 1.67e-119 | 390 |
| MS.gene026063.t1 | AT5G42540 | 61.312 | 442 | 162 | 4 | 1 | 436 | 1 | 439 | 5.94e-174 | 533 |
| MS.gene026063.t1 | AT5G42540 | 47.647 | 340 | 161 | 4 | 439 | 765 | 521 | 856 | 1.35e-97 | 330 |
| MS.gene026063.t1 | AT5G42540 | 61.312 | 442 | 162 | 4 | 1 | 436 | 1 | 439 | 8.68e-174 | 533 |
| MS.gene026063.t1 | AT5G42540 | 46.154 | 351 | 161 | 5 | 439 | 765 | 521 | 867 | 1.13e-94 | 322 |
Find 258 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGGCAAATGACTATAATTT+TGG | 0.185475 | 7.1:+2374475 | None:intergenic |
| AGAACGTTGCTGGTTCATTT+TGG | 0.201126 | 7.1:+2381085 | None:intergenic |
| TACTCCTGGCACTCCGTTTA+TGG | 0.213287 | 7.1:-2380848 | MS.gene026063:CDS |
| GACCAATGTTCTGGACAAAT+TGG | 0.222972 | 7.1:+2372953 | None:intergenic |
| ATTCACAGTTTCTTCACATT+TGG | 0.227269 | 7.1:-2380020 | MS.gene026063:intron |
| GGAGCTTTACTAATCCAATT+TGG | 0.241712 | 7.1:+2372916 | None:intergenic |
| TACAAACAGTGTCGAGTATT+TGG | 0.243130 | 7.1:+2380529 | None:intergenic |
| ACTACACCATCCGGAGGTTT+TGG | 0.243525 | 7.1:+2374099 | None:intergenic |
| ATTCTTCAATTCTATCCTTC+TGG | 0.261931 | 7.1:-2375106 | MS.gene026063:intron |
| TCCCCTGTTCTGGCATATCT+TGG | 0.272823 | 7.1:+2372794 | None:intergenic |
| CTCCTATACCACCTCCAAAT+TGG | 0.275309 | 7.1:-2372930 | MS.gene026063:CDS |
| TTAATGAGGCCGCAAAATTC+AGG | 0.283080 | 7.1:-2372997 | MS.gene026063:CDS |
| AATCAAGCATCTTACTATTT+CGG | 0.293526 | 7.1:+2374550 | None:intergenic |
| CTTTCTGATTCAAATGTTCC+TGG | 0.295528 | 7.1:-2380613 | MS.gene026063:CDS |
| TCTGGATCTGGAAAATATTA+TGG | 0.295965 | 7.1:-2373261 | MS.gene026063:CDS |
| GTATTTCTATGTTTCTTTGT+TGG | 0.300901 | 7.1:-2379913 | MS.gene026063:CDS |
| TGATATTTCTTCTTGTGAAT+TGG | 0.301092 | 7.1:+2380133 | None:intergenic |
| TTCACAGTTTCTTCACATTT+GGG | 0.301736 | 7.1:-2380019 | MS.gene026063:intron |
| CACCATTGATTCCCCTGTTC+TGG | 0.308473 | 7.1:+2372784 | None:intergenic |
| AAGGCCTTTGTTGGGTTTGC+CGG | 0.311591 | 7.1:-2376648 | MS.gene026063:CDS |
| CGATTACAGCGTAACCTTCC+TGG | 0.313558 | 7.1:-2380559 | MS.gene026063:CDS |
| AAAATGACAGACAGAATATT+AGG | 0.314810 | 7.1:-2373149 | MS.gene026063:CDS |
| GGTTTGCCGGTATTACTATC+AGG | 0.330788 | 7.1:-2376635 | MS.gene026063:CDS |
| ATCAAATCACGATATCTTTC+AGG | 0.331323 | 7.1:+2375148 | None:intergenic |
| CCCCTGTTCTGGCATATCTT+GGG | 0.336266 | 7.1:+2372795 | None:intergenic |
| ACTGAGGCACGTGGCTCTTC+AGG | 0.339418 | 7.1:+2377666 | None:intergenic |
| TGCCAACCATTAGACGCTAT+TGG | 0.340067 | 7.1:+2373171 | None:intergenic |
| GAGGAATCAAGTGCTTATTA+TGG | 0.352227 | 7.1:-2373237 | MS.gene026063:CDS |
| AATACTCGACACTGTTTGTA+TGG | 0.352561 | 7.1:-2380526 | MS.gene026063:CDS |
| ACCAATGTTCTGGACAAATT+GGG | 0.352870 | 7.1:+2372954 | None:intergenic |
| AATTTGGTACACTTTCTTGA+TGG | 0.355624 | 7.1:+2372831 | None:intergenic |
| AGGTTTCACACCTTCATCTA+TGG | 0.356467 | 7.1:+2373062 | None:intergenic |
| GCATACATTCCATTCGTATC+TGG | 0.361107 | 7.1:+2372895 | None:intergenic |
| AACTCCATGCCGTTGGGATT+AGG | 0.365006 | 7.1:+2382449 | None:intergenic |
| TACCTAGCACTTGGGTCAAT+TGG | 0.371281 | 7.1:+2374432 | None:intergenic |
| TTAATTCTCTCAATCTCCTC+TGG | 0.372214 | 7.1:+2377367 | None:intergenic |
| TCTTAAAGATTTAGCTGATC+TGG | 0.373125 | 7.1:-2375331 | MS.gene026063:CDS |
| CAGTTCCACAACATGAAAAC+TGG | 0.377145 | 7.1:-2373099 | MS.gene026063:CDS |
| TTATTATCTCAGGTTAAGTT+AGG | 0.377389 | 7.1:-2377442 | MS.gene026063:intron |
| CCAACTGGAGCCTCTGGATC+TGG | 0.378902 | 7.1:-2373273 | MS.gene026063:CDS |
| AGGTATTATGCCGAAAAGTT+TGG | 0.379144 | 7.1:-2377400 | MS.gene026063:CDS |
| GATATCCTGCAGGCCTTTGA+TGG | 0.379781 | 7.1:+2374255 | None:intergenic |
| AATGGATTCTCACCTTTCTC+TGG | 0.387851 | 7.1:+2373762 | None:intergenic |
| AAGCTTCTTTATCTTGCAAT+TGG | 0.388287 | 7.1:-2381598 | MS.gene026063:intron |
| TTCAATAATAATACATCCTA+TGG | 0.388452 | 7.1:-2373342 | MS.gene026063:CDS |
| GGCCTCATTAACATCATTGC+AGG | 0.394258 | 7.1:+2373009 | None:intergenic |
| TTGTATGATGGCTTGGAAAC+TGG | 0.396318 | 7.1:+2373310 | None:intergenic |
| CTTGGGTCAATTGGCAGAAC+AGG | 0.400438 | 7.1:+2374441 | None:intergenic |
| TCCCCAAGATATGCCAGAAC+AGG | 0.400629 | 7.1:-2372797 | MS.gene026063:CDS |
| GTATAGGAGGACCAATGTTC+TGG | 0.401365 | 7.1:+2372944 | None:intergenic |
| TGGGGACTCTACCCTCTTCA+AGG | 0.402481 | 7.1:-2375260 | MS.gene026063:intron |
| CGGAGGACCGCCGGCGACGG+AGG | 0.402724 | 7.1:+2382493 | None:intergenic |
| TAATACATCCTATGGATTAC+CGG | 0.403296 | 7.1:-2373334 | MS.gene026063:CDS |
| ATGAACAGGGTCAGACCAAC+TGG | 0.404880 | 7.1:-2373288 | MS.gene026063:CDS |
| GACAAATTGGGGTTGTAGAT+TGG | 0.412033 | 7.1:+2372966 | None:intergenic |
| CAGCTGCAAGATGGCCAACT+TGG | 0.412270 | 7.1:+2380209 | None:intergenic |
| TGATTTAAATACATCATCAT+AGG | 0.412508 | 7.1:+2381666 | None:intergenic |
| CAAGCCATCATACAATGAAC+AGG | 0.414857 | 7.1:-2373302 | MS.gene026063:CDS |
| TTAAACCTCTGCCTGTGTTA+TGG | 0.418218 | 7.1:-2373813 | MS.gene026063:CDS |
| TGATTTGATTATGTTGTCCT+TGG | 0.423279 | 7.1:-2380395 | MS.gene026063:CDS |
| TCGATCTCAAACGGAGGGTC+AGG | 0.423399 | 7.1:+2379961 | None:intergenic |
| AATTCACAAGAAGAAATATC+AGG | 0.424390 | 7.1:-2380131 | MS.gene026063:intron |
| CGAGGGAGAACATAAAATAA+TGG | 0.425845 | 7.1:-2380590 | MS.gene026063:CDS |
| GTCAGACCAACTGGAGCCTC+TGG | 0.428142 | 7.1:-2373279 | MS.gene026063:CDS |
| TTTGACACATCGACGGGAAA+CGG | 0.431095 | 7.1:+2382473 | None:intergenic |
| ACCGACAGCACTGCCATAAA+CGG | 0.431261 | 7.1:+2380835 | None:intergenic |
| AGATTTCCAATAGCGTCTAA+TGG | 0.433972 | 7.1:-2373177 | MS.gene026063:CDS |
| TGACCCTGTTCATTGTATGA+TGG | 0.435141 | 7.1:+2373298 | None:intergenic |
| ATTTGGTACACTTTCTTGAT+GGG | 0.436610 | 7.1:+2372832 | None:intergenic |
| ATCTTAATCCTCGCAGTCAT+AGG | 0.438296 | 7.1:-2374128 | MS.gene026063:CDS |
| CCCTGTTCTGGCATATCTTG+GGG | 0.444289 | 7.1:+2372796 | None:intergenic |
| TTCTCCCATCAAAGGCCTGC+AGG | 0.445200 | 7.1:-2374260 | MS.gene026063:CDS |
| ATCCAATTTGGAGGTGGTAT+AGG | 0.448508 | 7.1:+2372928 | None:intergenic |
| GACACTTGAAGGCACATTAA+CGG | 0.452556 | 7.1:-2374785 | MS.gene026063:intron |
| ATTGATGCATATCTATAGAA+AGG | 0.458601 | 7.1:-2379627 | MS.gene026063:CDS |
| GCAAGATAAAGAAGCTTCCT+TGG | 0.459474 | 7.1:+2381604 | None:intergenic |
| TCTGCCACAAGGACACTTGA+AGG | 0.459913 | 7.1:-2374796 | MS.gene026063:CDS |
| TTAGACGCTATTGGAAATCT+AGG | 0.460140 | 7.1:+2373180 | None:intergenic |
| CACATTCACTACCTAGCACT+TGG | 0.462129 | 7.1:+2374423 | None:intergenic |
| AGGCCTGGTCATCATGCCCT+GGG | 0.464073 | 7.1:+2373200 | None:intergenic |
| AATATGTAGAAGGCCTTTGT+TGG | 0.464735 | 7.1:-2376657 | MS.gene026063:CDS |
| GAAGGATAGAATTGAAGAAT+AGG | 0.464894 | 7.1:+2375109 | None:intergenic |
| AAACGGAGGACCGCCGGCGA+CGG | 0.465435 | 7.1:+2382490 | None:intergenic |
| CAGGTACCTGGAGCAATTGC+CGG | 0.467382 | 7.1:-2373414 | MS.gene026063:CDS |
| ACCTTCGTATTCCGCCAGCC+CGG | 0.467919 | 7.1:+2380772 | None:intergenic |
| CAGACAGAATATTAGGATAC+AGG | 0.472854 | 7.1:-2373142 | MS.gene026063:CDS |
| AGGACCGCCGGCGACGGAGG+GGG | 0.473796 | 7.1:+2382496 | None:intergenic |
| TGAATTGGAGTATCGTCAAC+AGG | 0.474275 | 7.1:+2380148 | None:intergenic |
| GCTGAGTGTCGCGGTAAGCC+AGG | 0.474429 | 7.1:-2380190 | MS.gene026063:CDS |
| AAATATTTCAGAAACGAGTT+CGG | 0.475523 | 7.1:-2379319 | MS.gene026063:CDS |
| GGAGGACCGCCGGCGACGGA+GGG | 0.475693 | 7.1:+2382494 | None:intergenic |
| CAGAAGCAAAAGGAGCATAA+TGG | 0.476071 | 7.1:+2375355 | None:intergenic |
| AGGGTGTCTGCTCGTGGCAG+TGG | 0.476697 | 7.1:-2376615 | MS.gene026063:intron |
| TAACACTTCTCTTGTTGTCC+AGG | 0.476772 | 7.1:+2380241 | None:intergenic |
| CAGGCAGAGGTTTAATATCA+AGG | 0.477111 | 7.1:+2373821 | None:intergenic |
| TAGTCTCAAGAATTCAATGA+AGG | 0.478468 | 7.1:-2377717 | MS.gene026063:CDS |
| ATCCCCAGGGCATGATGACC+AGG | 0.479247 | 7.1:-2373203 | MS.gene026063:CDS |
| CCTTCGTATTCCGCCAGCCC+GGG | 0.479777 | 7.1:+2380773 | None:intergenic |
| TAAGCCAGGTGATAATGCTT+TGG | 0.479822 | 7.1:-2380176 | MS.gene026063:CDS |
| AATTGAAGAATAGGCGATGA+AGG | 0.481600 | 7.1:+2375118 | None:intergenic |
| TCGACACTGTTTGTATGGAT+TGG | 0.482715 | 7.1:-2380521 | MS.gene026063:intron |
| ATTGGCAGTGATGGTATGAA+TGG | 0.484630 | 7.1:-2374328 | MS.gene026063:intron |
| TCCGTTTATGGCAGTGCTGT+CGG | 0.485088 | 7.1:-2380836 | MS.gene026063:CDS |
| TCATCATAGGTAGCAGGTGC+TGG | 0.485723 | 7.1:+2381679 | None:intergenic |
| TAGGCCTGGTCATCATGCCC+TGG | 0.486990 | 7.1:+2373199 | None:intergenic |
| GGAGTTCGATAACTTATACT+TGG | 0.488403 | 7.1:-2382432 | MS.gene026063:CDS |
| CAAGCTTTGACCATAGATGA+AGG | 0.490894 | 7.1:-2373072 | MS.gene026063:CDS |
| TGGGGCATTACTACACCATC+CGG | 0.491569 | 7.1:+2374090 | None:intergenic |
| TTATCGAACTCCATGCCGTT+GGG | 0.492570 | 7.1:+2382443 | None:intergenic |
| GTCCCCATGAGCTGATCAAA+TGG | 0.493134 | 7.1:+2375276 | None:intergenic |
| CTCATCAATGAACGGCAGCT+TGG | 0.494477 | 7.1:+2374831 | None:intergenic |
| CAGACCATTTGATCAGCTCA+TGG | 0.499785 | 7.1:-2375280 | MS.gene026063:CDS |
| CGCTCAAAGTCGATCTCAAA+CGG | 0.499880 | 7.1:+2379952 | None:intergenic |
| TGATACATCTCACAGACAAC+AGG | 0.500487 | 7.1:-2373433 | MS.gene026063:intron |
| GACATTTGAGTCATGAGTCT+CGG | 0.501740 | 7.1:+2380873 | None:intergenic |
| GGCGGCATCAAGCCAGAGAA+AGG | 0.502510 | 7.1:-2373774 | MS.gene026063:intron |
| TGGTAATAGAATAAGATATG+TGG | 0.504401 | 7.1:+2374495 | None:intergenic |
| ATCTCTAATGTTGGCATATG+CGG | 0.504727 | 7.1:+2379877 | None:intergenic |
| CGCTATTGGAAATCTAGGCC+TGG | 0.505373 | 7.1:+2373185 | None:intergenic |
| CTGTTCATTGTATGATGGCT+TGG | 0.507450 | 7.1:+2373303 | None:intergenic |
| CAGGTTAAGTTAGGACAGCC+TGG | 0.507922 | 7.1:-2377433 | MS.gene026063:CDS |
| GAAAACGGCGAGAACGTTGC+TGG | 0.509480 | 7.1:+2381075 | None:intergenic |
| TAATACCTTTCCGTGTATCC+AGG | 0.510288 | 7.1:+2377415 | None:intergenic |
| ATATGTAGAAGGCCTTTGTT+GGG | 0.511102 | 7.1:-2376656 | MS.gene026063:CDS |
| GCAAAAGGAGCATAATGGTA+CGG | 0.511773 | 7.1:+2375360 | None:intergenic |
| TGTCAGCCGTGCACATAAGT+TGG | 0.511844 | 7.1:-2374520 | MS.gene026063:CDS |
| TGAGGACCGGCAATTGCTCC+AGG | 0.514168 | 7.1:+2373408 | None:intergenic |
| GACGGGAAACGGAGGACCGC+CGG | 0.514327 | 7.1:+2382484 | None:intergenic |
| ACTGCCATAAACGGAGTGCC+AGG | 0.515997 | 7.1:+2380844 | None:intergenic |
| TGCCAGAACAGGGGAATCAA+TGG | 0.516588 | 7.1:-2372786 | MS.gene026063:CDS |
| GACTCAAATGTCATTACTCC+TGG | 0.520070 | 7.1:-2380862 | MS.gene026063:CDS |
| AGGGTAGGTACCTTGCCGTC+AGG | 0.521525 | 7.1:+2382377 | None:intergenic |
| ATGTATTATTATTGAACTGA+AGG | 0.522005 | 7.1:+2373349 | None:intergenic |
| TTCCAATAGCGTCTAATGGT+TGG | 0.525742 | 7.1:-2373173 | MS.gene026063:CDS |
| TAGAAAGGAATTCACTGCCA+TGG | 0.526115 | 7.1:-2379612 | MS.gene026063:CDS |
| TAGGTCTTGAAATATGTAGA+AGG | 0.530422 | 7.1:-2376667 | MS.gene026063:CDS |
| CCAGATCCAGAGGCTCCAGT+TGG | 0.530814 | 7.1:+2373273 | None:intergenic |
| TCTCACAGACAACAGGTACC+TGG | 0.531308 | 7.1:-2373426 | MS.gene026063:intron |
| GTTTGCCGGTATTACTATCA+GGG | 0.531517 | 7.1:-2376634 | MS.gene026063:CDS |
| GGTATCGATCCGCGAGCCAC+CGG | 0.532989 | 7.1:+2382555 | None:intergenic |
| GCAATTGCCGGTCCTCAACT+AGG | 0.533055 | 7.1:-2373402 | MS.gene026063:CDS |
| AGACCATTTGATCAGCTCAT+GGG | 0.534344 | 7.1:-2375279 | MS.gene026063:CDS |
| GACATCAAGAAACTGCAGTA+GGG | 0.534557 | 7.1:-2372870 | MS.gene026063:CDS |
| TTACTAATCCAATTTGGAGG+TGG | 0.535998 | 7.1:+2372922 | None:intergenic |
| GCTTTACTAATCCAATTTGG+AGG | 0.536084 | 7.1:+2372919 | None:intergenic |
| TAATGAGGCCGCAAAATTCA+GGG | 0.536538 | 7.1:-2372996 | MS.gene026063:CDS |
| TGGTGTAGTAATGCCCCAAA+AGG | 0.537759 | 7.1:-2374085 | MS.gene026063:intron |
| CCCCAAGATATGCCAGAACA+GGG | 0.538983 | 7.1:-2372796 | MS.gene026063:CDS |
| TATGGCATGAAGACAATAGT+AGG | 0.540298 | 7.1:-2373795 | MS.gene026063:CDS |
| AGCTGATCAAATGGTCTGAA+TGG | 0.541287 | 7.1:+2375285 | None:intergenic |
| CATCCTTGTTTCCATCCTGA+CGG | 0.542469 | 7.1:-2382392 | MS.gene026063:CDS |
| CAAAAGGAGCATAATGGTAC+GGG | 0.542488 | 7.1:+2375361 | None:intergenic |
| GTTATCGAACTCCATGCCGT+TGG | 0.543232 | 7.1:+2382442 | None:intergenic |
| GATTCAAATGTTCCTGGCGA+GGG | 0.544437 | 7.1:-2380607 | MS.gene026063:CDS |
| AAGCTGAAGAGGAAAGGCTT+AGG | 0.544883 | 7.1:-2380942 | MS.gene026063:CDS |
| CCAATGTTCTGGACAAATTG+GGG | 0.547336 | 7.1:+2372955 | None:intergenic |
| TGGACAAAATTACAATCCCC+AGG | 0.548411 | 7.1:-2373217 | MS.gene026063:CDS |
| CGAGTATTTGGATCGAAACC+AGG | 0.549757 | 7.1:+2380541 | None:intergenic |
| AATACATCATCATAGGTAGC+AGG | 0.550117 | 7.1:+2381673 | None:intergenic |
| GGGATGAGAGCTAGAGCAAG+AGG | 0.552834 | 7.1:-2377696 | MS.gene026063:CDS |
| TCTTTAAGATCAGAAGCAAA+AGG | 0.552972 | 7.1:+2375345 | None:intergenic |
| CCCCAATTTGTCCAGAACAT+TGG | 0.553860 | 7.1:-2372955 | MS.gene026063:CDS |
| TTATCTTACTGATGCGGGTG+AGG | 0.554390 | 7.1:-2379585 | MS.gene026063:intron |
| GAAACGAGTTCGGATTCAGC+AGG | 0.555899 | 7.1:-2379309 | MS.gene026063:intron |
| ATGAATCTCGTGTGTAGCCA+AGG | 0.557308 | 7.1:+2380378 | None:intergenic |
| TGATGGCTTGGAAACTGGTC+CGG | 0.558438 | 7.1:+2373315 | None:intergenic |
| CGCGACACTCAGCTGCAAGA+TGG | 0.559174 | 7.1:+2380200 | None:intergenic |
| ATATCCTGCAGGCCTTTGAT+GGG | 0.559807 | 7.1:+2374256 | None:intergenic |
| CACCTGCAATGATGTTAATG+AGG | 0.560222 | 7.1:-2373011 | MS.gene026063:CDS |
| AGAAAGGAATTCACTGCCAT+GGG | 0.560446 | 7.1:-2379611 | MS.gene026063:CDS |
| AGTCTCAAGAATTCAATGAA+GGG | 0.562373 | 7.1:-2377716 | MS.gene026063:CDS |
| TAGGCATATCCCAAAACCTC+CGG | 0.564951 | 7.1:-2374109 | MS.gene026063:CDS |
| CAATTTGGAGGTGGTATAGG+AGG | 0.567567 | 7.1:+2372931 | None:intergenic |
| AACTAGATTGAATTACAACC+CGG | 0.568042 | 7.1:-2380791 | MS.gene026063:CDS |
| TAGATGAAGGTGTGAAACCT+AGG | 0.570341 | 7.1:-2373059 | MS.gene026063:CDS |
| AGAACAGGTCTTTGTTGATG+AGG | 0.571558 | 7.1:+2374456 | None:intergenic |
| GATTGAATTACAACCCGGGC+TGG | 0.572355 | 7.1:-2380786 | MS.gene026063:CDS |
| GATTACACGCGATATCCTGC+AGG | 0.573047 | 7.1:+2374245 | None:intergenic |
| TGCTTCTCCTAGTTGAGGAC+CGG | 0.574623 | 7.1:+2373395 | None:intergenic |
| ACCTCACGTATCTCTAATGT+TGG | 0.575885 | 7.1:+2379868 | None:intergenic |
| TGTATTATTATTGAACTGAA+GGG | 0.576496 | 7.1:+2373350 | None:intergenic |
| AACTTATACTTGGACATGAA+CGG | 0.578215 | 7.1:-2382422 | MS.gene026063:CDS |
| TCATGCCATAACACAGGCAG+AGG | 0.578423 | 7.1:+2373808 | None:intergenic |
| GAGGACCGCCGGCGACGGAG+GGG | 0.579167 | 7.1:+2382495 | None:intergenic |
| GACCATTTGATCAGCTCATG+GGG | 0.580363 | 7.1:-2375278 | MS.gene026063:CDS |
| CAGTCCAAAGCATTATCACC+TGG | 0.580913 | 7.1:+2380172 | None:intergenic |
| AGACACCCTGATAGTAATAC+CGG | 0.582543 | 7.1:+2376629 | None:intergenic |
| AGACATCAAGAAACTGCAGT+AGG | 0.582649 | 7.1:-2372871 | MS.gene026063:CDS |
| GTTAGGACAGCCTGGATACA+CGG | 0.583378 | 7.1:-2377425 | MS.gene026063:CDS |
| GGTGGTTATCTTACTGATGC+GGG | 0.587695 | 7.1:-2379590 | MS.gene026063:CDS |
| CTGAACCTTGTCTACAACTG+AGG | 0.588103 | 7.1:+2377650 | None:intergenic |
| AGGCAGAGGTTTAATATCAA+GGG | 0.588405 | 7.1:+2373822 | None:intergenic |
| ACATTACTATATTACCTGCC+AGG | 0.589775 | 7.1:+2374969 | None:intergenic |
| AACTTCTTCTCATCAATGAA+CGG | 0.590941 | 7.1:+2374823 | None:intergenic |
| GTCGAACCAATGAAAAGAGA+TGG | 0.591397 | 7.1:+2381626 | None:intergenic |
| AAACTGGTCCGGTAATCCAT+AGG | 0.592591 | 7.1:+2373326 | None:intergenic |
| TGATTCAAATGTTCCTGGCG+AGG | 0.594338 | 7.1:-2380608 | MS.gene026063:CDS |
| AGAAGTTGCTTTCTGCCACA+AGG | 0.595457 | 7.1:-2374807 | MS.gene026063:CDS |
| ACATCAAGAAACTGCAGTAG+GGG | 0.596033 | 7.1:-2372869 | MS.gene026063:CDS |
| TTGTTTCCATCCTGACGGCA+AGG | 0.598464 | 7.1:-2382387 | MS.gene026063:intron |
| TAGGTACCTTGCCGTCAGGA+TGG | 0.599091 | 7.1:+2382381 | None:intergenic |
| GTTGTATCTTCTCCCATCAA+AGG | 0.603496 | 7.1:-2374268 | MS.gene026063:CDS |
| GACACATCGACGGGAAACGG+AGG | 0.603591 | 7.1:+2382476 | None:intergenic |
| TGCCAATTGACCCAAGTGCT+AGG | 0.604527 | 7.1:-2374434 | MS.gene026063:intron |
| TCAAAGTCGATCTCAAACGG+AGG | 0.605414 | 7.1:+2379955 | None:intergenic |
| AAAACCTAATCCCAACGGCA+TGG | 0.605797 | 7.1:-2382453 | MS.gene026063:CDS |
| TGTTACATGTGTGGCCAAGT+TGG | 0.606147 | 7.1:-2380223 | MS.gene026063:CDS |
| TGAGCTGCTTCTCCTAGTTG+AGG | 0.606700 | 7.1:+2373390 | None:intergenic |
| AGCCGCAAAAGATGCAGCTG+AGG | 0.609306 | 7.1:-2381051 | MS.gene026063:CDS |
| TGAATTACAACCCGGGCTGG+CGG | 0.613944 | 7.1:-2380783 | MS.gene026063:CDS |
| TGTAGGAAGCTGAAGAGGAA+AGG | 0.613961 | 7.1:-2380948 | MS.gene026063:intron |
| ACTATCAGGGTGTCTGCTCG+TGG | 0.614258 | 7.1:-2376621 | MS.gene026063:CDS |
| CATCTTGCAGCTGAGTGTCG+CGG | 0.617157 | 7.1:-2380199 | MS.gene026063:CDS |
| CAGGTGATAATGCTTTGGAC+TGG | 0.618608 | 7.1:-2380171 | MS.gene026063:CDS |
| ATCTGGAAAATATTATGGTG+AGG | 0.619282 | 7.1:-2373256 | MS.gene026063:CDS |
| GGGTGGTTATCTTACTGATG+CGG | 0.619734 | 7.1:-2379591 | MS.gene026063:CDS |
| GAAGGCACTGCAGATGACCT+AGG | 0.620782 | 7.1:+2373042 | None:intergenic |
| ATCAGTAAGATAACCACCCA+TGG | 0.620991 | 7.1:+2379595 | None:intergenic |
| CGACGTCGACAATAGATCGC+GGG | 0.623019 | 7.1:+2382534 | None:intergenic |
| ATCTATTGTCGACGTCGTGG+AGG | 0.624264 | 7.1:-2382528 | MS.gene026063:CDS |
| TTGCCGTCAGGATGGAAACA+AGG | 0.625065 | 7.1:+2382389 | None:intergenic |
| AGTAAAGCTCCAGATACGAA+TGG | 0.625953 | 7.1:-2372904 | MS.gene026063:CDS |
| AAGGAATTCACTGCCATGGG+TGG | 0.626307 | 7.1:-2379608 | MS.gene026063:CDS |
| TGTGCCTTCAAGTGTCCTTG+TGG | 0.630317 | 7.1:+2374792 | None:intergenic |
| AGAATATTAGGATACAGGAT+AGG | 0.631548 | 7.1:-2373137 | MS.gene026063:CDS |
| AGGTGAAGAAACCTTGAAGA+GGG | 0.634776 | 7.1:+2375249 | None:intergenic |
| GCGAGCCACCGGTAAAACGC+TGG | 0.635276 | 7.1:+2382566 | None:intergenic |
| GCGATCTATTGTCGACGTCG+TGG | 0.635340 | 7.1:-2382531 | MS.gene026063:CDS |
| CAAAGTCGATCTCAAACGGA+GGG | 0.636831 | 7.1:+2379956 | None:intergenic |
| GGTGTTGTAGGAAGCTGAAG+AGG | 0.639395 | 7.1:-2380953 | MS.gene026063:intron |
| ACATTCACTACCTAGCACTT+GGG | 0.641918 | 7.1:+2374424 | None:intergenic |
| CCCGGGCTGGCGGAATACGA+AGG | 0.643900 | 7.1:-2380773 | MS.gene026063:intron |
| GAAGGGAGTTTCTGACAAGA+CGG | 0.646157 | 7.1:+2373367 | None:intergenic |
| TATTTGGATCGAAACCAGGA+AGG | 0.646867 | 7.1:+2380545 | None:intergenic |
| CATCAAGAAACTGCAGTAGG+GGG | 0.655948 | 7.1:-2372868 | MS.gene026063:CDS |
| GTTTGGTGCATCAGATCCAG+AGG | 0.659389 | 7.1:-2377383 | MS.gene026063:CDS |
| GAGGTGAAGAAACCTTGAAG+AGG | 0.661542 | 7.1:+2375248 | None:intergenic |
| GTTTATGGCAGTGCTGTCGG+TGG | 0.661728 | 7.1:-2380833 | MS.gene026063:CDS |
| ACGTGCCTCAGTTGTAGACA+AGG | 0.662085 | 7.1:-2377655 | MS.gene026063:intron |
| CAAGAGAAGTGTTACATGTG+TGG | 0.668111 | 7.1:-2380232 | MS.gene026063:CDS |
| GGCCTGGTCATCATGCCCTG+GGG | 0.669216 | 7.1:+2373201 | None:intergenic |
| GTGTCAAAACCTAATCCCAA+CGG | 0.670233 | 7.1:-2382458 | MS.gene026063:CDS |
| CATATCCCAAAACCTCCGGA+TGG | 0.671077 | 7.1:-2374105 | MS.gene026063:CDS |
| GGCATTACTACACCATCCGG+AGG | 0.673114 | 7.1:+2374093 | None:intergenic |
| GGACAAAATTACAATCCCCA+GGG | 0.673297 | 7.1:-2373216 | MS.gene026063:CDS |
| GTGGAACCAACTTATGTGCA+CGG | 0.675740 | 7.1:+2374514 | None:intergenic |
| GACAGCCTGGATACACGGAA+AGG | 0.678565 | 7.1:-2377420 | MS.gene026063:CDS |
| AATACCGGCAAACCCAACAA+AGG | 0.682222 | 7.1:+2376644 | None:intergenic |
| TTGTCTTCATGCCATAACAC+AGG | 0.691453 | 7.1:+2373802 | None:intergenic |
| AAGCCATCATACAATGAACA+GGG | 0.694969 | 7.1:-2373301 | MS.gene026063:CDS |
| GGGATATGCCTATGACTGCG+AGG | 0.696093 | 7.1:+2374120 | None:intergenic |
| CCCAAGATATGCCAGAACAG+GGG | 0.699164 | 7.1:-2372795 | MS.gene026063:CDS |
| TTGTCTACAACTGAGGCACG+TGG | 0.702248 | 7.1:+2377657 | None:intergenic |
| ACTAGATTGAATTACAACCC+GGG | 0.712162 | 7.1:-2380790 | MS.gene026063:CDS |
| GGCATGAAGACAATAGTAGG+CGG | 0.712215 | 7.1:-2373792 | MS.gene026063:CDS |
| ACGACGTCGACAATAGATCG+CGG | 0.715988 | 7.1:+2382533 | None:intergenic |
| GCCAACATTAGAGATACGTG+AGG | 0.729212 | 7.1:-2379869 | MS.gene026063:intron |
| TTTGATGGGAGAAGATACAA+CGG | 0.745786 | 7.1:+2374270 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 2372783 | 2382597 | 2372783 | ID=MS.gene026063 |
| chr7.1 | mRNA | 2372783 | 2382597 | 2372783 | ID=MS.gene026063.t1;Parent=MS.gene026063 |
| chr7.1 | exon | 2382388 | 2382597 | 2382388 | ID=MS.gene026063.t1.exon1;Parent=MS.gene026063.t1 |
| chr7.1 | CDS | 2382388 | 2382597 | 2382388 | ID=cds.MS.gene026063.t1;Parent=MS.gene026063.t1 |
| chr7.1 | exon | 2381599 | 2381701 | 2381599 | ID=MS.gene026063.t1.exon2;Parent=MS.gene026063.t1 |
| chr7.1 | CDS | 2381599 | 2381701 | 2381599 | ID=cds.MS.gene026063.t1;Parent=MS.gene026063.t1 |
| chr7.1 | exon | 2381049 | 2381125 | 2381049 | ID=MS.gene026063.t1.exon3;Parent=MS.gene026063.t1 |
| chr7.1 | CDS | 2381049 | 2381125 | 2381049 | ID=cds.MS.gene026063.t1;Parent=MS.gene026063.t1 |
| chr7.1 | exon | 2380774 | 2380965 | 2380774 | ID=MS.gene026063.t1.exon4;Parent=MS.gene026063.t1 |
| chr7.1 | CDS | 2380774 | 2380965 | 2380774 | ID=cds.MS.gene026063.t1;Parent=MS.gene026063.t1 |
| chr7.1 | exon | 2380522 | 2380641 | 2380522 | ID=MS.gene026063.t1.exon5;Parent=MS.gene026063.t1 |
| chr7.1 | CDS | 2380522 | 2380641 | 2380522 | ID=cds.MS.gene026063.t1;Parent=MS.gene026063.t1 |
| chr7.1 | exon | 2380360 | 2380422 | 2380360 | ID=MS.gene026063.t1.exon6;Parent=MS.gene026063.t1 |
| chr7.1 | CDS | 2380360 | 2380422 | 2380360 | ID=cds.MS.gene026063.t1;Parent=MS.gene026063.t1 |
| chr7.1 | exon | 2380132 | 2380275 | 2380132 | ID=MS.gene026063.t1.exon7;Parent=MS.gene026063.t1 |
| chr7.1 | CDS | 2380132 | 2380275 | 2380132 | ID=cds.MS.gene026063.t1;Parent=MS.gene026063.t1 |
| chr7.1 | exon | 2379870 | 2380034 | 2379870 | ID=MS.gene026063.t1.exon8;Parent=MS.gene026063.t1 |
| chr7.1 | CDS | 2379870 | 2380034 | 2379870 | ID=cds.MS.gene026063.t1;Parent=MS.gene026063.t1 |
| chr7.1 | exon | 2379586 | 2379663 | 2379586 | ID=MS.gene026063.t1.exon9;Parent=MS.gene026063.t1 |
| chr7.1 | CDS | 2379586 | 2379663 | 2379586 | ID=cds.MS.gene026063.t1;Parent=MS.gene026063.t1 |
| chr7.1 | exon | 2379310 | 2379396 | 2379310 | ID=MS.gene026063.t1.exon10;Parent=MS.gene026063.t1 |
| chr7.1 | CDS | 2379310 | 2379396 | 2379310 | ID=cds.MS.gene026063.t1;Parent=MS.gene026063.t1 |
| chr7.1 | exon | 2377656 | 2377736 | 2377656 | ID=MS.gene026063.t1.exon11;Parent=MS.gene026063.t1 |
| chr7.1 | CDS | 2377656 | 2377736 | 2377656 | ID=cds.MS.gene026063.t1;Parent=MS.gene026063.t1 |
| chr7.1 | exon | 2377357 | 2377452 | 2377357 | ID=MS.gene026063.t1.exon12;Parent=MS.gene026063.t1 |
| chr7.1 | CDS | 2377357 | 2377452 | 2377357 | ID=cds.MS.gene026063.t1;Parent=MS.gene026063.t1 |
| chr7.1 | exon | 2376616 | 2376686 | 2376616 | ID=MS.gene026063.t1.exon13;Parent=MS.gene026063.t1 |
| chr7.1 | CDS | 2376616 | 2376686 | 2376616 | ID=cds.MS.gene026063.t1;Parent=MS.gene026063.t1 |
| chr7.1 | exon | 2375261 | 2375389 | 2375261 | ID=MS.gene026063.t1.exon14;Parent=MS.gene026063.t1 |
| chr7.1 | CDS | 2375261 | 2375389 | 2375261 | ID=cds.MS.gene026063.t1;Parent=MS.gene026063.t1 |
| chr7.1 | exon | 2375107 | 2375183 | 2375107 | ID=MS.gene026063.t1.exon15;Parent=MS.gene026063.t1 |
| chr7.1 | CDS | 2375107 | 2375183 | 2375107 | ID=cds.MS.gene026063.t1;Parent=MS.gene026063.t1 |
| chr7.1 | exon | 2374984 | 2375024 | 2374984 | ID=MS.gene026063.t1.exon16;Parent=MS.gene026063.t1 |
| chr7.1 | CDS | 2374984 | 2375024 | 2374984 | ID=cds.MS.gene026063.t1;Parent=MS.gene026063.t1 |
| chr7.1 | exon | 2374786 | 2374860 | 2374786 | ID=MS.gene026063.t1.exon17;Parent=MS.gene026063.t1 |
| chr7.1 | CDS | 2374786 | 2374860 | 2374786 | ID=cds.MS.gene026063.t1;Parent=MS.gene026063.t1 |
| chr7.1 | exon | 2374435 | 2374586 | 2374435 | ID=MS.gene026063.t1.exon18;Parent=MS.gene026063.t1 |
| chr7.1 | CDS | 2374435 | 2374586 | 2374435 | ID=cds.MS.gene026063.t1;Parent=MS.gene026063.t1 |
| chr7.1 | exon | 2374238 | 2374342 | 2374238 | ID=MS.gene026063.t1.exon19;Parent=MS.gene026063.t1 |
| chr7.1 | CDS | 2374238 | 2374342 | 2374238 | ID=cds.MS.gene026063.t1;Parent=MS.gene026063.t1 |
| chr7.1 | exon | 2374086 | 2374161 | 2374086 | ID=MS.gene026063.t1.exon20;Parent=MS.gene026063.t1 |
| chr7.1 | CDS | 2374086 | 2374161 | 2374086 | ID=cds.MS.gene026063.t1;Parent=MS.gene026063.t1 |
| chr7.1 | exon | 2373775 | 2373854 | 2373775 | ID=MS.gene026063.t1.exon21;Parent=MS.gene026063.t1 |
| chr7.1 | CDS | 2373775 | 2373854 | 2373775 | ID=cds.MS.gene026063.t1;Parent=MS.gene026063.t1 |
| chr7.1 | exon | 2372783 | 2373440 | 2372783 | ID=MS.gene026063.t1.exon22;Parent=MS.gene026063.t1 |
| chr7.1 | CDS | 2372783 | 2373440 | 2372783 | ID=cds.MS.gene026063.t1;Parent=MS.gene026063.t1 |
| Gene Sequence |
| Protein sequence |
