Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026687.t1 | KEH40452.1 | 97.7 | 557 | 13 | 0 | 9 | 565 | 71 | 627 | 0.00E+00 | 1171 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026687.t1 | Q8W4A7 | 76.3 | 523 | 121 | 3 | 23 | 542 | 74 | 596 | 8.2e-254 | 877.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026687.t1 | A0A072VF97 | 97.7 | 557 | 13 | 0 | 9 | 565 | 71 | 627 | 0.0e+00 | 1171.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene026687 | MS.gene049302 | PPI |
MS.gene013329 | MS.gene026687 | PPI |
MS.gene026687 | MS.gene30980 | PPI |
MS.gene026687 | MS.gene06426 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026687.t1 | MTR_1g029130 | 97.666 | 557 | 13 | 0 | 9 | 565 | 71 | 627 | 0.0 | 1141 |
MS.gene026687.t1 | MTR_3g095910 | 70.902 | 543 | 156 | 2 | 23 | 565 | 97 | 637 | 0.0 | 816 |
MS.gene026687.t1 | MTR_1g019540 | 48.454 | 485 | 228 | 7 | 54 | 520 | 55 | 535 | 3.14e-168 | 489 |
MS.gene026687.t1 | MTR_1g019540 | 48.454 | 485 | 228 | 7 | 54 | 520 | 108 | 588 | 1.01e-167 | 489 |
MS.gene026687.t1 | MTR_1g019530 | 47.390 | 479 | 236 | 7 | 54 | 520 | 110 | 584 | 1.24e-157 | 463 |
MS.gene026687.t1 | MTR_1g082880 | 40.653 | 551 | 278 | 11 | 1 | 522 | 20 | 550 | 1.72e-139 | 416 |
MS.gene026687.t1 | MTR_7g113610 | 39.882 | 509 | 267 | 8 | 41 | 520 | 57 | 555 | 5.97e-134 | 402 |
MS.gene026687.t1 | MTR_1g080460 | 36.000 | 175 | 106 | 5 | 223 | 394 | 16 | 187 | 1.83e-28 | 119 |
MS.gene026687.t1 | MTR_7g115460 | 35.758 | 165 | 101 | 4 | 232 | 394 | 35 | 196 | 5.92e-27 | 115 |
MS.gene026687.t1 | MTR_1g084670 | 26.923 | 260 | 134 | 9 | 228 | 443 | 18 | 265 | 5.67e-17 | 82.8 |
MS.gene026687.t1 | MTR_1g084670 | 26.407 | 231 | 129 | 6 | 226 | 415 | 16 | 246 | 3.40e-16 | 79.3 |
MS.gene026687.t1 | MTR_1g084670 | 32.500 | 120 | 78 | 1 | 226 | 342 | 16 | 135 | 7.71e-16 | 77.4 |
MS.gene026687.t1 | MTR_7g109920 | 26.459 | 257 | 133 | 8 | 231 | 443 | 24 | 268 | 9.05e-16 | 79.3 |
MS.gene026687.t1 | MTR_4g132185 | 25.854 | 205 | 113 | 3 | 228 | 393 | 19 | 223 | 1.33e-15 | 78.2 |
MS.gene026687.t1 | MTR_7g109920 | 26.238 | 202 | 110 | 3 | 231 | 393 | 24 | 225 | 2.10e-15 | 77.0 |
MS.gene026687.t1 | MTR_7g111850 | 24.016 | 254 | 139 | 7 | 233 | 443 | 26 | 268 | 2.90e-14 | 74.7 |
MS.gene026687.t1 | MTR_1g084660 | 26.459 | 257 | 126 | 9 | 228 | 443 | 18 | 252 | 1.93e-13 | 72.0 |
MS.gene026687.t1 | MTR_1g084660 | 25.877 | 228 | 121 | 6 | 226 | 415 | 16 | 233 | 1.47e-12 | 68.2 |
MS.gene026687.t1 | MTR_4g100950 | 24.855 | 173 | 121 | 4 | 230 | 393 | 36 | 208 | 8.91e-12 | 67.8 |
MS.gene026687.t1 | MTR_5g012590 | 25.568 | 176 | 116 | 5 | 230 | 393 | 38 | 210 | 2.14e-11 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026687.t1 | AT1G77130 | 76.392 | 521 | 120 | 3 | 23 | 540 | 74 | 594 | 0.0 | 856 |
MS.gene026687.t1 | AT3G18660 | 67.778 | 540 | 164 | 3 | 22 | 555 | 106 | 641 | 0.0 | 773 |
MS.gene026687.t1 | AT3G18660 | 67.778 | 540 | 164 | 3 | 22 | 555 | 105 | 640 | 0.0 | 773 |
MS.gene026687.t1 | AT3G18660 | 67.778 | 540 | 164 | 3 | 22 | 555 | 110 | 645 | 0.0 | 771 |
MS.gene026687.t1 | AT4G33330 | 49.281 | 487 | 228 | 5 | 54 | 525 | 43 | 525 | 3.13e-171 | 496 |
MS.gene026687.t1 | AT4G33330 | 49.281 | 487 | 228 | 5 | 54 | 525 | 111 | 593 | 5.57e-170 | 495 |
MS.gene026687.t1 | AT4G33330 | 49.281 | 487 | 228 | 5 | 54 | 525 | 122 | 604 | 6.20e-170 | 495 |
MS.gene026687.t1 | AT4G33330 | 49.793 | 482 | 223 | 5 | 54 | 520 | 111 | 588 | 9.41e-170 | 496 |
MS.gene026687.t1 | AT1G08990 | 45.825 | 491 | 236 | 9 | 54 | 522 | 79 | 561 | 1.03e-144 | 429 |
MS.gene026687.t1 | AT1G54940 | 43.381 | 491 | 240 | 10 | 54 | 520 | 74 | 550 | 1.90e-138 | 413 |
MS.gene026687.t1 | AT4G33330 | 48.571 | 350 | 160 | 5 | 54 | 387 | 122 | 467 | 1.26e-107 | 331 |
MS.gene026687.t1 | AT5G18480 | 37.222 | 180 | 107 | 5 | 216 | 393 | 16 | 191 | 5.35e-31 | 127 |
MS.gene026687.t1 | AT1G60470 | 27.138 | 269 | 135 | 8 | 224 | 443 | 11 | 267 | 7.80e-18 | 85.5 |
MS.gene026687.t1 | AT4G26250 | 26.296 | 270 | 143 | 8 | 218 | 443 | 12 | 269 | 9.17e-18 | 85.1 |
MS.gene026687.t1 | AT1G09350 | 27.519 | 258 | 130 | 8 | 231 | 443 | 15 | 260 | 1.50e-17 | 84.7 |
MS.gene026687.t1 | AT1G56600 | 25.623 | 281 | 147 | 9 | 208 | 443 | 3 | 266 | 3.62e-17 | 83.6 |
MS.gene026687.t1 | AT1G60450 | 26.794 | 209 | 112 | 4 | 226 | 393 | 13 | 221 | 8.82e-16 | 79.3 |
MS.gene026687.t1 | AT2G47180 | 23.000 | 300 | 170 | 9 | 220 | 475 | 18 | 300 | 5.72e-15 | 77.0 |
MS.gene026687.t1 | AT5G30500 | 25.000 | 200 | 110 | 3 | 231 | 390 | 24 | 223 | 1.02e-14 | 74.7 |
MS.gene026687.t1 | AT5G30500 | 24.490 | 196 | 108 | 3 | 231 | 386 | 24 | 219 | 2.88e-13 | 71.6 |
MS.gene026687.t1 | AT5G23790 | 22.006 | 309 | 180 | 9 | 226 | 490 | 16 | 307 | 2.31e-12 | 68.9 |
MS.gene026687.t1 | AT2G35710 | 27.273 | 176 | 115 | 6 | 230 | 394 | 61 | 234 | 1.14e-11 | 66.6 |
MS.gene026687.t1 | AT2G35710 | 26.966 | 178 | 113 | 6 | 230 | 394 | 61 | 234 | 8.64e-11 | 65.1 |
Find 127 sgRNAs with CRISPR-Local
Find 186 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGAACTTCTTGAAACATTTC+TGG | 0.133286 | 1.2:-15199316 | MS.gene026687:CDS |
ATTGCTGTAGTTTCCTTTCT+TGG | 0.140768 | 1.2:+15199019 | None:intergenic |
TATGCTTCTGGTTCTGCTTT+TGG | 0.153956 | 1.2:+15199638 | None:intergenic |
TTTCAAGAACATTAGTTATT+TGG | 0.160948 | 1.2:+15201192 | None:intergenic |
TTTCCTATGGCTGATATTTC+AGG | 0.192514 | 1.2:+15199500 | None:intergenic |
TTGCACATTTCAACTACTTA+TGG | 0.215615 | 1.2:-15199429 | MS.gene026687:CDS |
ATATTTATTCTTTGGGTTGC+AGG | 0.224728 | 1.2:-15201295 | MS.gene026687:CDS |
TTATATGGATATTTATTCTT+TGG | 0.233016 | 1.2:-15201303 | None:intergenic |
TCTTCTTCATCTATCCATTC+TGG | 0.242049 | 1.2:+15201017 | None:intergenic |
TTCAAGAAGTTCATGTGTTT+TGG | 0.260706 | 1.2:+15199326 | None:intergenic |
TTCCACTCGTTATATGCTTC+TGG | 0.267699 | 1.2:+15199626 | None:intergenic |
TCCTTGCAAGTAAAGAGATT+TGG | 0.288240 | 1.2:+15200774 | None:intergenic |
GCGACGAAAACTCGTCTCTT+TGG | 0.290093 | 1.2:-15199269 | MS.gene026687:CDS |
TCCTGATTCTTTGAATTGTA+TGG | 0.290849 | 1.2:+15199663 | None:intergenic |
GGAGAGTATGTTATGGCATT+GGG | 0.309950 | 1.2:-15198931 | MS.gene026687:CDS |
GGCATTGGGGTGACAAGAAT+TGG | 0.313543 | 1.2:-15198917 | MS.gene026687:CDS |
GAAGGATAAGGACACATATC+AGG | 0.317828 | 1.2:-15201165 | MS.gene026687:CDS |
TATATGGATATTTATTCTTT+GGG | 0.323736 | 1.2:-15201302 | MS.gene026687:CDS |
AACGCGTGATCTCGTGATTC+TGG | 0.330372 | 1.2:-15199744 | MS.gene026687:CDS |
TCCGAGATTACGACTGCAAC+TGG | 0.347243 | 1.2:-15199187 | MS.gene026687:CDS |
AAGTAAAGAGATTTGGAATT+GGG | 0.351966 | 1.2:+15200781 | None:intergenic |
AGGCGACGAGGATGAGAAAA+AGG | 0.356243 | 1.2:-15199291 | MS.gene026687:CDS |
CAAGTAAAGAGATTTGGAAT+TGG | 0.363595 | 1.2:+15200780 | None:intergenic |
TCCATACAATTCAAAGAATC+AGG | 0.366674 | 1.2:-15199664 | MS.gene026687:CDS |
AGGACTACATGCTCAGCTTC+TGG | 0.371387 | 1.2:+15201086 | None:intergenic |
TCTTGAAAATTTGAAGGATA+AGG | 0.375525 | 1.2:-15201177 | MS.gene026687:CDS |
CTCTCTGAGTTTATGCAGGT+CGG | 0.379464 | 1.2:+15200713 | None:intergenic |
TAATGTTCTTGAAAATTTGA+AGG | 0.384534 | 1.2:-15201183 | MS.gene026687:CDS |
AAGCTTCCCTGCGACAAGTC+AGG | 0.395485 | 1.2:-15200915 | MS.gene026687:CDS |
TGAACTATCAGTTCCTTTGA+AGG | 0.396557 | 1.2:-15200664 | MS.gene026687:CDS |
CTTTATGTCATCCACTATCT+AGG | 0.402882 | 1.2:-15199230 | MS.gene026687:CDS |
TTTCCTGGTGCCTGAATCCT+AGG | 0.405848 | 1.2:+15200963 | None:intergenic |
CACATGAACCAATAGGTAAC+TGG | 0.406938 | 1.2:+15200685 | None:intergenic |
GAGAAGCTCCAGTTACCTAT+TGG | 0.407327 | 1.2:-15200693 | MS.gene026687:CDS |
TCCAACACTACCTAGGATTC+AGG | 0.408343 | 1.2:-15200973 | MS.gene026687:CDS |
GGGAGAGTATGTTATGGCAT+TGG | 0.410396 | 1.2:-15198932 | MS.gene026687:CDS |
AGGAGTGGCTTGGCAGCAGC+TGG | 0.412642 | 1.2:-15199695 | MS.gene026687:CDS |
GTCTTGCTGCTTCAATCTGC+AGG | 0.421473 | 1.2:+15200862 | None:intergenic |
ATATTTCAGGCATCTCAAAA+AGG | 0.428904 | 1.2:+15199513 | None:intergenic |
GAACTTCTTGAAACATTTCT+GGG | 0.433094 | 1.2:-15199315 | MS.gene026687:CDS |
GTTTCTGGGAGAGTATGTTA+TGG | 0.438372 | 1.2:-15198938 | MS.gene026687:CDS |
ATCCTACAATGGTGGTGACC+AGG | 0.447256 | 1.2:-15199387 | MS.gene026687:CDS |
GCGTTTGAAAACGTGCTTTG+AGG | 0.447428 | 1.2:-15198967 | MS.gene026687:CDS |
ATTACAGCAAATTTCGTCTC+TGG | 0.450343 | 1.2:-15199604 | MS.gene026687:CDS |
GGATTGTTGCATAAGCTTCT+CGG | 0.451047 | 1.2:+15199834 | None:intergenic |
TCAGTTCCTTTGAAGGCTAA+AGG | 0.454613 | 1.2:-15200657 | MS.gene026687:intron |
GATAGTTCACATGAACCAAT+AGG | 0.459168 | 1.2:+15200678 | None:intergenic |
GCTCAAAGTATTCGAATGTC+TGG | 0.460744 | 1.2:-15199770 | MS.gene026687:CDS |
CTAGATAGTGGATGACATAA+AGG | 0.461375 | 1.2:+15199231 | None:intergenic |
TGCAGAAGTTCTGTTTGCTT+AGG | 0.469003 | 1.2:-15199082 | MS.gene026687:CDS |
TCCAAATCTCTTTACTTGCA+AGG | 0.470250 | 1.2:-15200775 | MS.gene026687:CDS |
TGCAGCGTGACGGGAATGCC+TGG | 0.473934 | 1.2:-15200746 | MS.gene026687:CDS |
AGACTTGCTGCGACTTCCAA+AGG | 0.473992 | 1.2:-15200843 | MS.gene026687:CDS |
TGTTACTAGAAGCATAGTTC+AGG | 0.483810 | 1.2:+15201060 | None:intergenic |
TCTGCACATATATATGTTTG+TGG | 0.485140 | 1.2:-15199806 | MS.gene026687:CDS |
TCTCTGAGTTTATGCAGGTC+GGG | 0.486148 | 1.2:+15200714 | None:intergenic |
AGGATATTATGCAGCGTGAC+GGG | 0.490590 | 1.2:-15200755 | MS.gene026687:CDS |
GTTAGAGTGGGATCGTAGAC+AGG | 0.496234 | 1.2:-15199042 | MS.gene026687:CDS |
CATATATATGTGCAGAGTGC+AGG | 0.498763 | 1.2:+15199813 | None:intergenic |
CCAGCGCCCTGACTTGTCGC+AGG | 0.504978 | 1.2:+15200908 | None:intergenic |
ATGTAGCTCATGCGAGGTGG+TGG | 0.505348 | 1.2:-15199133 | MS.gene026687:CDS |
ATGCTTCTAGTAACATCACT+TGG | 0.506425 | 1.2:-15201052 | MS.gene026687:CDS |
GAAACTACAGCAATGGTCAC+TGG | 0.506581 | 1.2:-15199010 | MS.gene026687:CDS |
CAGTGTAGCATTGTTTCCTA+TGG | 0.507446 | 1.2:+15199487 | None:intergenic |
ACTGTTCAACTCAGGTGTAA+TGG | 0.513305 | 1.2:-15199468 | MS.gene026687:CDS |
ACCCTGGTCACCACCATTGT+AGG | 0.514384 | 1.2:+15199385 | None:intergenic |
ATGCACTGGATGAAACCCTT+TGG | 0.516067 | 1.2:+15200827 | None:intergenic |
GCTTCTCTCTGAGTTTATGC+AGG | 0.516546 | 1.2:+15200709 | None:intergenic |
AATACTTTGAGCTGCGGTGA+TGG | 0.520044 | 1.2:+15199781 | None:intergenic |
TTCTTGAAACATTTCTGGGA+AGG | 0.522014 | 1.2:-15199311 | MS.gene026687:CDS |
TCCAGTTGCAGTCGTAATCT+CGG | 0.522527 | 1.2:+15199186 | None:intergenic |
AGCAGAAGGCAGCGTTAGAG+TGG | 0.527478 | 1.2:-15199055 | MS.gene026687:CDS |
GACTTGCTGCGACTTCCAAA+GGG | 0.531841 | 1.2:-15200842 | MS.gene026687:CDS |
TCCTGACCTTTAGCCTTCAA+AGG | 0.531986 | 1.2:+15200651 | None:intergenic |
AGCTTCCCTGCGACAAGTCA+GGG | 0.533888 | 1.2:-15200914 | MS.gene026687:CDS |
GTGGCTTGGCAGCAGCTGGA+TGG | 0.534926 | 1.2:-15199691 | MS.gene026687:CDS |
CTACTTGTCCAACACTACCT+AGG | 0.544561 | 1.2:-15200980 | MS.gene026687:CDS |
GCCTGAATCCTAGGTAGTGT+TGG | 0.546134 | 1.2:+15200972 | None:intergenic |
CCTGCGACAAGTCAGGGCGC+TGG | 0.547118 | 1.2:-15200908 | MS.gene026687:CDS |
TGATTATCACAGGAGTGGCT+TGG | 0.547142 | 1.2:-15199705 | MS.gene026687:CDS |
TGGATGACATAAAGGATTGG+TGG | 0.547445 | 1.2:+15199239 | None:intergenic |
CTGGAACGTGGACATTCTGC+AGG | 0.550039 | 1.2:-15199168 | MS.gene026687:CDS |
GATCGTAGACAGGCCAAGAA+AGG | 0.550520 | 1.2:-15199032 | MS.gene026687:CDS |
CGATATTTCTGAGTATAAGA+AGG | 0.553853 | 1.2:+15199540 | None:intergenic |
TTCCTGTCGTTTACATATGT+AGG | 0.555071 | 1.2:+15201272 | None:intergenic |
AAACAATAAGTGATTATCAC+AGG | 0.557166 | 1.2:-15199715 | MS.gene026687:CDS |
CTAGGTAGTGTTGGACAAGT+AGG | 0.557193 | 1.2:+15200981 | None:intergenic |
ATGGTTTAGTACCTAGATAG+TGG | 0.565355 | 1.2:+15199219 | None:intergenic |
AAGGACACATATCAGGGTGT+TGG | 0.565940 | 1.2:-15201158 | MS.gene026687:CDS |
GGCCTACATATGTAAACGAC+AGG | 0.567340 | 1.2:-15201274 | MS.gene026687:CDS |
GTCACGAAAAGTACATGCAC+TGG | 0.569264 | 1.2:+15200813 | None:intergenic |
AGTTGAAATGTGCAATTCGA+TGG | 0.571909 | 1.2:+15199437 | None:intergenic |
CAGGTCGGGTTCATAAAGCC+AGG | 0.574180 | 1.2:+15200728 | None:intergenic |
AGCTCATGCGAGGTGGTGGA+AGG | 0.575417 | 1.2:-15199129 | MS.gene026687:CDS |
TTTGCTTAGGTCGAAGCAGA+AGG | 0.575458 | 1.2:-15199069 | MS.gene026687:CDS |
TCCTACAATGGTGGTGACCA+GGG | 0.581119 | 1.2:-15199386 | MS.gene026687:CDS |
ATGCCTGAAATATCAGCCAT+AGG | 0.584336 | 1.2:-15199503 | MS.gene026687:CDS |
GGGAAGACTTGTATCCAGAA+TGG | 0.585294 | 1.2:-15201031 | MS.gene026687:CDS |
ACATATGTAAACGACAGGAA+TGG | 0.596076 | 1.2:-15201269 | MS.gene026687:CDS |
CAGCGCCCTGACTTGTCGCA+GGG | 0.596806 | 1.2:+15200909 | None:intergenic |
CTACCTAGGATTCAGGCACC+AGG | 0.597753 | 1.2:-15200966 | MS.gene026687:CDS |
AAGGATATTATGCAGCGTGA+CGG | 0.600793 | 1.2:-15200756 | MS.gene026687:CDS |
TAGTGGATGACATAAAGGAT+TGG | 0.601872 | 1.2:+15199236 | None:intergenic |
AATGAGATTGTATCCTACAA+TGG | 0.606182 | 1.2:-15199398 | MS.gene026687:CDS |
AAATTTCATTTAGATAACCC+TGG | 0.606443 | 1.2:+15199369 | None:intergenic |
GCAGAAGGCAGCGTTAGAGT+GGG | 0.609692 | 1.2:-15199054 | MS.gene026687:CDS |
ATGAAAGTGAGATTGACCAC+TGG | 0.622446 | 1.2:-15201121 | MS.gene026687:CDS |
AACCAGAAGCATATAACGAG+TGG | 0.623151 | 1.2:-15199628 | MS.gene026687:CDS |
CTGGTACTAGCTGCTTCCAG+TGG | 0.625456 | 1.2:+15201105 | None:intergenic |
AAGAAAGGAAACTACAGCAA+TGG | 0.626082 | 1.2:-15199017 | MS.gene026687:CDS |
CATTCGAATACTTTGAGCTG+CGG | 0.628095 | 1.2:+15199775 | None:intergenic |
ATTTCTGAGTATAAGAAGGT+CGG | 0.628917 | 1.2:+15199544 | None:intergenic |
TAGAAGCATAGTTCAGGCGA+AGG | 0.629094 | 1.2:+15201066 | None:intergenic |
AAGGATAAGGACACATATCA+GGG | 0.632162 | 1.2:-15201164 | MS.gene026687:CDS |
TGCTTCTAGTAACATCACTT+GGG | 0.638241 | 1.2:-15201051 | MS.gene026687:CDS |
AATGCTACACTGTTCAACTC+AGG | 0.645973 | 1.2:-15199476 | MS.gene026687:CDS |
GAGAGTATGTTATGGCATTG+GGG | 0.651503 | 1.2:-15198930 | MS.gene026687:CDS |
TAATCTCGGAAACAAAGCCA+TGG | 0.656479 | 1.2:+15199200 | None:intergenic |
ACATTTCTGGGAAGGCGACG+AGG | 0.659097 | 1.2:-15199303 | MS.gene026687:CDS |
TTACGACTGCAACTGGAACG+TGG | 0.659215 | 1.2:-15199180 | MS.gene026687:CDS |
ACTATCTAGGTACTAAACCA+TGG | 0.660025 | 1.2:-15199217 | MS.gene026687:CDS |
CGAGCAATGTAGCTCATGCG+AGG | 0.661213 | 1.2:-15199139 | MS.gene026687:CDS |
ATAAGTGATTATCACAGGAG+TGG | 0.662338 | 1.2:-15199710 | MS.gene026687:CDS |
GCAATGTAGCTCATGCGAGG+TGG | 0.689730 | 1.2:-15199136 | MS.gene026687:CDS |
GTTCAACTCAGGTGTAATGG+TGG | 0.709097 | 1.2:-15199465 | MS.gene026687:CDS |
GAGATTGTATCCTACAATGG+TGG | 0.728088 | 1.2:-15199395 | MS.gene026687:CDS |
ACAGCAATAAGATCAAGACG+TGG | 0.768801 | 1.2:+15200939 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTAATTGAATCTTATTGTC+TGG | - | chr1.2:15200116-15200135 | MS.gene026687:intron | 20.0% |
!! | TAATGTTCTTGAAAATTTGA+AGG | - | chr1.2:15198964-15198983 | MS.gene026687:CDS | 20.0% |
!! | TGTTCATTAACATTGAAAAT+AGG | + | chr1.2:15199701-15199720 | None:intergenic | 20.0% |
!! | TTTCAAGAACATTAGTTATT+TGG | + | chr1.2:15198958-15198977 | None:intergenic | 20.0% |
!!! | ATCTAAATGAAATTTTCACA+TGG | - | chr1.2:15200786-15200805 | MS.gene026687:CDS | 20.0% |
! | AAACAATAAGTGATTATCAC+AGG | - | chr1.2:15200432-15200451 | MS.gene026687:intron | 25.0% |
! | AAATTTCATTTAGATAACCC+TGG | + | chr1.2:15200781-15200800 | None:intergenic | 25.0% |
! | ACATTAAGCAATAAGGTAAT+CGG | + | chr1.2:15200074-15200093 | None:intergenic | 25.0% |
! | ATAAAAGGTTATAGAAGTCT+CGG | + | chr1.2:15199640-15199659 | None:intergenic | 25.0% |
! | TCTTGAAAATTTGAAGGATA+AGG | - | chr1.2:15198970-15198989 | MS.gene026687:CDS | 25.0% |
!! | AAGTAAAGAGATTTGGAATT+GGG | + | chr1.2:15199369-15199388 | None:intergenic | 25.0% |
!! | CATCTTTTCTTAATATTGAC+TGG | - | chr1.2:15198930-15198949 | MS.gene026687:CDS | 25.0% |
!! | TAAATGAAATTTTCACATGG+TGG | - | chr1.2:15200789-15200808 | MS.gene026687:CDS | 25.0% |
!! | TTCAACAGAAAATTTTCACT+CGG | - | chr1.2:15200280-15200299 | MS.gene026687:intron | 25.0% |
!! | TTTTCTTCAATATTCAGATC+TGG | + | chr1.2:15199756-15199775 | None:intergenic | 25.0% |
AATGAGATTGTATCCTACAA+TGG | - | chr1.2:15200749-15200768 | MS.gene026687:CDS | 30.0% | |
ATATTTCAGGCATCTCAAAA+AGG | + | chr1.2:15200637-15200656 | None:intergenic | 30.0% | |
ATTTCTGAGTATAAGAAGGT+CGG | + | chr1.2:15200606-15200625 | None:intergenic | 30.0% | |
CATGTATACTGGAAATTCAA+AGG | + | chr1.2:15200219-15200238 | None:intergenic | 30.0% | |
CTTTGAATTTCCAGTATACA+TGG | - | chr1.2:15200217-15200236 | MS.gene026687:intron | 30.0% | |
GAACTTCTTGAAACATTTCT+GGG | - | chr1.2:15200832-15200851 | MS.gene026687:CDS | 30.0% | |
TCCATACAATTCAAAGAATC+AGG | - | chr1.2:15200483-15200502 | MS.gene026687:intron | 30.0% | |
TCCTGATTCTTTGAATTGTA+TGG | + | chr1.2:15200487-15200506 | None:intergenic | 30.0% | |
TCTGCACATATATATGTTTG+TGG | - | chr1.2:15200341-15200360 | MS.gene026687:intron | 30.0% | |
TGAACTTCTTGAAACATTTC+TGG | - | chr1.2:15200831-15200850 | MS.gene026687:CDS | 30.0% | |
TTCTCTGACATTAAGCAATA+AGG | + | chr1.2:15200081-15200100 | None:intergenic | 30.0% | |
TTGCACATTTCAACTACTTA+TGG | - | chr1.2:15200718-15200737 | MS.gene026687:CDS | 30.0% | |
! | AGAAAATTTTCACTCGGAAA+GGG | - | chr1.2:15200286-15200305 | MS.gene026687:intron | 30.0% |
! | CAAGTAAAGAGATTTGGAAT+TGG | + | chr1.2:15199370-15199389 | None:intergenic | 30.0% |
! | CGATATTTCTGAGTATAAGA+AGG | + | chr1.2:15200610-15200629 | None:intergenic | 30.0% |
! | GAGACTTCTATAACCTTTTA+TGG | - | chr1.2:15199639-15199658 | MS.gene026687:CDS | 30.0% |
! | GAGTGAAAATTTTCTGTTGA+AGG | + | chr1.2:15200281-15200300 | None:intergenic | 30.0% |
! | TTCAAGAAGTTCATGTGTTT+TGG | + | chr1.2:15200824-15200843 | None:intergenic | 30.0% |
!! | ATATTTATTCTTTGGGTTGC+AGG | - | chr1.2:15198852-15198871 | MS.gene026687:CDS | 30.0% |
!! | CTTTGAGGATTTTTGTTTCT+GGG | - | chr1.2:15201195-15201214 | MS.gene026687:CDS | 30.0% |
!! | TGAAAAGTGCTAAAAGAACA+AGG | + | chr1.2:15199563-15199582 | None:intergenic | 30.0% |
AACACCATAGATACTAGTCA+AGG | - | chr1.2:15199717-15199736 | MS.gene026687:CDS | 35.0% | |
AAGAAAGGAAACTACAGCAA+TGG | - | chr1.2:15201130-15201149 | MS.gene026687:CDS | 35.0% | |
AAGGATAAGGACACATATCA+GGG | - | chr1.2:15198983-15199002 | MS.gene026687:CDS | 35.0% | |
ACATATGTAAACGACAGGAA+TGG | - | chr1.2:15198878-15198897 | MS.gene026687:CDS | 35.0% | |
ACTATCTAGGTACTAAACCA+TGG | - | chr1.2:15200930-15200949 | MS.gene026687:CDS | 35.0% | |
AGTTGAAATGTGCAATTCGA+TGG | + | chr1.2:15200713-15200732 | None:intergenic | 35.0% | |
ATAAGTGATTATCACAGGAG+TGG | - | chr1.2:15200437-15200456 | MS.gene026687:intron | 35.0% | |
ATGCTTCTAGTAACATCACT+TGG | - | chr1.2:15199095-15199114 | MS.gene026687:CDS | 35.0% | |
ATGGTTTAGTACCTAGATAG+TGG | + | chr1.2:15200931-15200950 | None:intergenic | 35.0% | |
ATTACAGCAAATTTCGTCTC+TGG | - | chr1.2:15200543-15200562 | MS.gene026687:intron | 35.0% | |
ATTGCTGTAGTTTCCTTTCT+TGG | + | chr1.2:15201131-15201150 | None:intergenic | 35.0% | |
CAGATCTGAATGTTGAAGAA+AGG | - | chr1.2:15199831-15199850 | MS.gene026687:CDS | 35.0% | |
CTAGTTAACTCCATGTATAC+TGG | + | chr1.2:15200230-15200249 | None:intergenic | 35.0% | |
CTTTATGTCATCCACTATCT+AGG | - | chr1.2:15200917-15200936 | MS.gene026687:CDS | 35.0% | |
CTTTCTTCAACATTCAGATC+TGG | + | chr1.2:15199833-15199852 | None:intergenic | 35.0% | |
GATAGTTCACATGAACCAAT+AGG | + | chr1.2:15199472-15199491 | None:intergenic | 35.0% | |
TCCAAATCTCTTTACTTGCA+AGG | - | chr1.2:15199372-15199391 | MS.gene026687:CDS | 35.0% | |
TCCTTGCAAGTAAAGAGATT+TGG | + | chr1.2:15199376-15199395 | None:intergenic | 35.0% | |
TCGTATTCATTCAAGAGATC+AGG | - | chr1.2:15199928-15199947 | MS.gene026687:intron | 35.0% | |
TCTTCTTCATCTATCCATTC+TGG | + | chr1.2:15199133-15199152 | None:intergenic | 35.0% | |
TGAACTATCAGTTCCTTTGA+AGG | - | chr1.2:15199483-15199502 | MS.gene026687:CDS | 35.0% | |
TGCTTCTAGTAACATCACTT+GGG | - | chr1.2:15199096-15199115 | MS.gene026687:CDS | 35.0% | |
TTTCCTATGGCTGATATTTC+AGG | + | chr1.2:15200650-15200669 | None:intergenic | 35.0% | |
! | AAATTTTCACATGGTGGCAT+CGG | - | chr1.2:15200795-15200814 | MS.gene026687:CDS | 35.0% |
! | CAGAAAATTTTCACTCGGAA+AGG | - | chr1.2:15200285-15200304 | MS.gene026687:intron | 35.0% |
! | TAGTGGATGACATAAAGGAT+TGG | + | chr1.2:15200914-15200933 | None:intergenic | 35.0% |
! | TGTTACTAGAAGCATAGTTC+AGG | + | chr1.2:15199090-15199109 | None:intergenic | 35.0% |
! | TTCCTGTCGTTTACATATGT+AGG | + | chr1.2:15198878-15198897 | None:intergenic | 35.0% |
! | TTCTTGAAACATTTCTGGGA+AGG | - | chr1.2:15200836-15200855 | MS.gene026687:CDS | 35.0% |
!! | CAATGTTTGTTTTCCCAACT+CGG | - | chr1.2:15199863-15199882 | MS.gene026687:intron | 35.0% |
!! | CTAGATAGTGGATGACATAA+AGG | + | chr1.2:15200919-15200938 | None:intergenic | 35.0% |
!!! | GCTTTGAGGATTTTTGTTTC+TGG | - | chr1.2:15201194-15201213 | MS.gene026687:CDS | 35.0% |
AACCGAAAAAGAAACGTGTG+CGG | + | chr1.2:15200009-15200028 | None:intergenic | 40.0% | |
AACTCGGAGATGTTGCTAAT+TGG | - | chr1.2:15199879-15199898 | MS.gene026687:intron | 40.0% | |
AAGGATATTATGCAGCGTGA+CGG | - | chr1.2:15199391-15199410 | MS.gene026687:CDS | 40.0% | |
AATGCTACACTGTTCAACTC+AGG | - | chr1.2:15200671-15200690 | MS.gene026687:CDS | 40.0% | |
AATTAGCAACATCTCCGAGT+TGG | + | chr1.2:15199880-15199899 | None:intergenic | 40.0% | |
ACAGCAATAAGATCAAGACG+TGG | + | chr1.2:15199211-15199230 | None:intergenic | 40.0% | |
ACTCGGAGATGTTGCTAATT+GGG | - | chr1.2:15199880-15199899 | MS.gene026687:intron | 40.0% | |
ACTGTTCAACTCAGGTGTAA+TGG | - | chr1.2:15200679-15200698 | MS.gene026687:CDS | 40.0% | |
ATGAAAGTGAGATTGACCAC+TGG | - | chr1.2:15199026-15199045 | MS.gene026687:CDS | 40.0% | |
ATGCCTGAAATATCAGCCAT+AGG | - | chr1.2:15200644-15200663 | MS.gene026687:intron | 40.0% | |
ATGTCTTAGTGCGTTCCATA+AGG | - | chr1.2:15200159-15200178 | MS.gene026687:intron | 40.0% | |
ATTAGCAACATCTCCGAGTT+GGG | + | chr1.2:15199879-15199898 | None:intergenic | 40.0% | |
ATTGGGAAAATGACCAGTGT+AGG | - | chr1.2:15199897-15199916 | MS.gene026687:intron | 40.0% | |
CACATGAACCAATAGGTAAC+TGG | + | chr1.2:15199465-15199484 | None:intergenic | 40.0% | |
CAGTGTAGCATTGTTTCCTA+TGG | + | chr1.2:15200663-15200682 | None:intergenic | 40.0% | |
CATATATATGTGCAGAGTGC+AGG | + | chr1.2:15200337-15200356 | None:intergenic | 40.0% | |
CATTCGAATACTTTGAGCTG+CGG | + | chr1.2:15200375-15200394 | None:intergenic | 40.0% | |
GAAGGATAAGGACACATATC+AGG | - | chr1.2:15198982-15199001 | MS.gene026687:CDS | 40.0% | |
GACACCTTGACTAGTATCTA+TGG | + | chr1.2:15199724-15199743 | None:intergenic | 40.0% | |
GAGATTGTATCCTACAATGG+TGG | - | chr1.2:15200752-15200771 | MS.gene026687:CDS | 40.0% | |
GGATTGTTGCATAAGCTTCT+CGG | + | chr1.2:15200316-15200335 | None:intergenic | 40.0% | |
TAATCTCGGAAACAAAGCCA+TGG | + | chr1.2:15200950-15200969 | None:intergenic | 40.0% | |
TACGAATTAATGCCCTACAC+TGG | + | chr1.2:15199913-15199932 | None:intergenic | 40.0% | |
TGCAGAAGTTCTGTTTGCTT+AGG | - | chr1.2:15201065-15201084 | MS.gene026687:CDS | 40.0% | |
TGGATGACATAAAGGATTGG+TGG | + | chr1.2:15200911-15200930 | None:intergenic | 40.0% | |
TTATGGAACGCACTAAGACA+TGG | + | chr1.2:15200160-15200179 | None:intergenic | 40.0% | |
TTCCACTCGTTATATGCTTC+TGG | + | chr1.2:15200524-15200543 | None:intergenic | 40.0% | |
TTGGGAAAATGACCAGTGTA+GGG | - | chr1.2:15199898-15199917 | MS.gene026687:intron | 40.0% | |
! | AACCAGAAGCATATAACGAG+TGG | - | chr1.2:15200519-15200538 | MS.gene026687:intron | 40.0% |
! | CAGAACTTCTGCAAGTTTTC+TGG | + | chr1.2:15201058-15201077 | None:intergenic | 40.0% |
! | GAGAGTATGTTATGGCATTG+GGG | - | chr1.2:15201217-15201236 | MS.gene026687:CDS | 40.0% |
! | GCTCAAAGTATTCGAATGTC+TGG | - | chr1.2:15200377-15200396 | MS.gene026687:intron | 40.0% |
! | GGAGAGTATGTTATGGCATT+GGG | - | chr1.2:15201216-15201235 | MS.gene026687:CDS | 40.0% |
! | GTTTCTGGGAGAGTATGTTA+TGG | - | chr1.2:15201209-15201228 | MS.gene026687:CDS | 40.0% |
! | TCAAAGCACGTTTTCAAACG+CGG | + | chr1.2:15201181-15201200 | None:intergenic | 40.0% |
! | TCAGTTCCTTTGAAGGCTAA+AGG | - | chr1.2:15199490-15199509 | MS.gene026687:CDS | 40.0% |
! | TGCATTTTTCCGCAATGTCA+AGG | + | chr1.2:15199593-15199612 | None:intergenic | 40.0% |
!!! | GATTTAGTTTTGACAGCAGC+AGG | + | chr1.2:15201286-15201305 | None:intergenic | 40.0% |
!!! | TATGCTTCTGGTTCTGCTTT+TGG | + | chr1.2:15200512-15200531 | None:intergenic | 40.0% |
AAGGACACATATCAGGGTGT+TGG | - | chr1.2:15198989-15199008 | MS.gene026687:CDS | 45.0% | |
AATACTTTGAGCTGCGGTGA+TGG | + | chr1.2:15200369-15200388 | None:intergenic | 45.0% | |
AGGATATTATGCAGCGTGAC+GGG | - | chr1.2:15199392-15199411 | MS.gene026687:CDS | 45.0% | |
ATGCACTGGATGAAACCCTT+TGG | + | chr1.2:15199323-15199342 | None:intergenic | 45.0% | |
CAATGCAATTGCAGCTGCAT+CGG | + | chr1.2:15199617-15199636 | None:intergenic | 45.0% | |
CAATGCGAACCTTGACATTG+CGG | - | chr1.2:15199581-15199600 | MS.gene026687:CDS | 45.0% | |
CACGCTTTCAAGAGCCATAT+TGG | + | chr1.2:15200185-15200204 | None:intergenic | 45.0% | |
CGGTTAGTAGTTAGCGATGT+GGG | + | chr1.2:15200054-15200073 | None:intergenic | 45.0% | |
CTACTTGTCCAACACTACCT+AGG | - | chr1.2:15199167-15199186 | MS.gene026687:CDS | 45.0% | |
CTCTCTGAGTTTATGCAGGT+CGG | + | chr1.2:15199437-15199456 | None:intergenic | 45.0% | |
GAAACTACAGCAATGGTCAC+TGG | - | chr1.2:15201137-15201156 | MS.gene026687:CDS | 45.0% | |
GAGAAGCTCCAGTTACCTAT+TGG | - | chr1.2:15199454-15199473 | MS.gene026687:CDS | 45.0% | |
GCATAGAACAACCACAGTTG+CGG | + | chr1.2:15199668-15199687 | None:intergenic | 45.0% | |
GCGTTTGAAAACGTGCTTTG+AGG | - | chr1.2:15201180-15201199 | MS.gene026687:CDS | 45.0% | |
GCTTCTCTCTGAGTTTATGC+AGG | + | chr1.2:15199441-15199460 | None:intergenic | 45.0% | |
GGCCTACATATGTAAACGAC+AGG | - | chr1.2:15198873-15198892 | MS.gene026687:CDS | 45.0% | |
GGGAAGACTTGTATCCAGAA+TGG | - | chr1.2:15199116-15199135 | MS.gene026687:CDS | 45.0% | |
GTTCAACTCAGGTGTAATGG+TGG | - | chr1.2:15200682-15200701 | MS.gene026687:CDS | 45.0% | |
TCCAACACTACCTAGGATTC+AGG | - | chr1.2:15199174-15199193 | MS.gene026687:CDS | 45.0% | |
TCCAGTTGCAGTCGTAATCT+CGG | + | chr1.2:15200964-15200983 | None:intergenic | 45.0% | |
TCGGTTAGTAGTTAGCGATG+TGG | + | chr1.2:15200055-15200074 | None:intergenic | 45.0% | |
TCTCTGAGTTTATGCAGGTC+GGG | + | chr1.2:15199436-15199455 | None:intergenic | 45.0% | |
TGATTATCACAGGAGTGGCT+TGG | - | chr1.2:15200442-15200461 | MS.gene026687:intron | 45.0% | |
TGCGTTCCATAAGGCCAATA+TGG | - | chr1.2:15200168-15200187 | MS.gene026687:intron | 45.0% | |
TTTGCTTAGGTCGAAGCAGA+AGG | - | chr1.2:15201078-15201097 | MS.gene026687:CDS | 45.0% | |
! | AAGAAACGTGTGCGGCTTTT+AGG | + | chr1.2:15200001-15200020 | None:intergenic | 45.0% |
! | AGATCAAGACGTGGTTTTCC+TGG | + | chr1.2:15199202-15199221 | None:intergenic | 45.0% |
! | AGCCGCACACGTTTCTTTTT+CGG | - | chr1.2:15200004-15200023 | MS.gene026687:intron | 45.0% |
! | CAAAGCACGTTTTCAAACGC+GGG | + | chr1.2:15201180-15201199 | None:intergenic | 45.0% |
! | CTAGGTAGTGTTGGACAAGT+AGG | + | chr1.2:15199169-15199188 | None:intergenic | 45.0% |
! | GATCTGGTACTTAGCATCGA+TGG | + | chr1.2:15199817-15199836 | None:intergenic | 45.0% |
! | GGGAGAGTATGTTATGGCAT+TGG | - | chr1.2:15201215-15201234 | MS.gene026687:CDS | 45.0% |
! | GTCACGAAAAGTACATGCAC+TGG | + | chr1.2:15199337-15199356 | None:intergenic | 45.0% |
! | TAGAAGCATAGTTCAGGCGA+AGG | + | chr1.2:15199084-15199103 | None:intergenic | 45.0% |
! | TCCTGACCTTTAGCCTTCAA+AGG | + | chr1.2:15199499-15199518 | None:intergenic | 45.0% |
! | TCCTTTGAAGGCTAAAGGTC+AGG | - | chr1.2:15199495-15199514 | MS.gene026687:CDS | 45.0% |
!! | CAAGAGCCATATTGGCCTTA+TGG | + | chr1.2:15200177-15200196 | None:intergenic | 45.0% |
!! | CTTCTGCAAGTTTTCTGGCA+TGG | + | chr1.2:15201053-15201072 | None:intergenic | 45.0% |
!!! | TTAGTTTTGACAGCAGCAGG+TGG | + | chr1.2:15201283-15201302 | None:intergenic | 45.0% |
!!! | TTTTTTTTTTTTAAGAATTT+GGG | + | chr1.2:15199963-15199982 | None:intergenic | 5.0% |
!!! | TTTTTTTTTTTTTAAGAATT+TGG | + | chr1.2:15199964-15199983 | None:intergenic | 5.0% |
AACGCGTGATCTCGTGATTC+TGG | - | chr1.2:15200403-15200422 | MS.gene026687:intron | 50.0% | |
ACAGTTGCGGCAGCCATAAA+AGG | + | chr1.2:15199655-15199674 | None:intergenic | 50.0% | |
AGGACTACATGCTCAGCTTC+TGG | + | chr1.2:15199064-15199083 | None:intergenic | 50.0% | |
AGGCGACGAGGATGAGAAAA+AGG | - | chr1.2:15200856-15200875 | MS.gene026687:CDS | 50.0% | |
GATCGTAGACAGGCCAAGAA+AGG | - | chr1.2:15201115-15201134 | MS.gene026687:CDS | 50.0% | |
GCCTGAATCCTAGGTAGTGT+TGG | + | chr1.2:15199178-15199197 | None:intergenic | 50.0% | |
GCGACGAAAACTCGTCTCTT+TGG | - | chr1.2:15200878-15200897 | MS.gene026687:CDS | 50.0% | |
GTTAGAGTGGGATCGTAGAC+AGG | - | chr1.2:15201105-15201124 | MS.gene026687:CDS | 50.0% | |
TCCGAGATTACGACTGCAAC+TGG | - | chr1.2:15200960-15200979 | MS.gene026687:CDS | 50.0% | |
TTACGACTGCAACTGGAACG+TGG | - | chr1.2:15200967-15200986 | MS.gene026687:CDS | 50.0% | |
TTTCCTGGTGCCTGAATCCT+AGG | + | chr1.2:15199187-15199206 | None:intergenic | 50.0% | |
! | ATCCTACAATGGTGGTGACC+AGG | - | chr1.2:15200760-15200779 | MS.gene026687:CDS | 50.0% |
! | GGCATTGGGGTGACAAGAAT+TGG | - | chr1.2:15201230-15201249 | MS.gene026687:CDS | 50.0% |
! | GTCTTGCTGCTTCAATCTGC+AGG | + | chr1.2:15199288-15199307 | None:intergenic | 50.0% |
! | TCCTACAATGGTGGTGACCA+GGG | - | chr1.2:15200761-15200780 | MS.gene026687:CDS | 50.0% |
! | TTTTATGGCTGCCGCAACTG+TGG | - | chr1.2:15199654-15199673 | MS.gene026687:CDS | 50.0% |
!! | AGACTTGCTGCGACTTCCAA+AGG | - | chr1.2:15199304-15199323 | MS.gene026687:CDS | 50.0% |
!! | GACTTGCTGCGACTTCCAAA+GGG | - | chr1.2:15199305-15199324 | MS.gene026687:CDS | 50.0% |
AAGCTTCCCTGCGACAAGTC+AGG | - | chr1.2:15199232-15199251 | MS.gene026687:CDS | 55.0% | |
ACCCTGGTCACCACCATTGT+AGG | + | chr1.2:15200765-15200784 | None:intergenic | 55.0% | |
AGCAGAAGGCAGCGTTAGAG+TGG | - | chr1.2:15201092-15201111 | MS.gene026687:CDS | 55.0% | |
AGCTTCCCTGCGACAAGTCA+GGG | - | chr1.2:15199233-15199252 | MS.gene026687:CDS | 55.0% | |
ATGTAGCTCATGCGAGGTGG+TGG | - | chr1.2:15201014-15201033 | MS.gene026687:CDS | 55.0% | |
CAGGTCGGGTTCATAAAGCC+AGG | + | chr1.2:15199422-15199441 | None:intergenic | 55.0% | |
CGAGCAATGTAGCTCATGCG+AGG | - | chr1.2:15201008-15201027 | MS.gene026687:CDS | 55.0% | |
CTACCTAGGATTCAGGCACC+AGG | - | chr1.2:15199181-15199200 | MS.gene026687:CDS | 55.0% | |
CTGGAACGTGGACATTCTGC+AGG | - | chr1.2:15200979-15200998 | MS.gene026687:CDS | 55.0% | |
CTGGTACTAGCTGCTTCCAG+TGG | + | chr1.2:15199045-15199064 | None:intergenic | 55.0% | |
GCAATGTAGCTCATGCGAGG+TGG | - | chr1.2:15201011-15201030 | MS.gene026687:CDS | 55.0% | |
GCAGAAGGCAGCGTTAGAGT+GGG | - | chr1.2:15201093-15201112 | MS.gene026687:CDS | 55.0% | |
! | ACATTTCTGGGAAGGCGACG+AGG | - | chr1.2:15200844-15200863 | MS.gene026687:CDS | 55.0% |
!! | AGCTCATGCGAGGTGGTGGA+AGG | - | chr1.2:15201018-15201037 | MS.gene026687:CDS | 60.0% |
! | AGGAGTGGCTTGGCAGCAGC+TGG | - | chr1.2:15200452-15200471 | MS.gene026687:intron | 65.0% |
! | CAGCGCCCTGACTTGTCGCA+GGG | + | chr1.2:15199241-15199260 | None:intergenic | 65.0% |
! | GTGGCTTGGCAGCAGCTGGA+TGG | - | chr1.2:15200456-15200475 | MS.gene026687:intron | 65.0% |
! | TGCAGCGTGACGGGAATGCC+TGG | - | chr1.2:15199401-15199420 | MS.gene026687:CDS | 65.0% |
CCTGCGACAAGTCAGGGCGC+TGG | - | chr1.2:15199239-15199258 | MS.gene026687:CDS | 70.0% | |
! | CCAGCGCCCTGACTTGTCGC+AGG | + | chr1.2:15199242-15199261 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 15198848 | 15201321 | 15198848 | ID=MS.gene026687 |
chr1.2 | mRNA | 15198848 | 15201321 | 15198848 | ID=MS.gene026687.t1;Parent=MS.gene026687 |
chr1.2 | exon | 15200658 | 15201321 | 15200658 | ID=MS.gene026687.t1.exon1;Parent=MS.gene026687.t1 |
chr1.2 | CDS | 15200658 | 15201321 | 15200658 | ID=cds.MS.gene026687.t1;Parent=MS.gene026687.t1 |
chr1.2 | exon | 15198848 | 15199881 | 15198848 | ID=MS.gene026687.t1.exon2;Parent=MS.gene026687.t1 |
chr1.2 | CDS | 15198848 | 15199881 | 15198848 | ID=cds.MS.gene026687.t1;Parent=MS.gene026687.t1 |
Gene Sequence |
Protein sequence |