Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026725.t1 | KEH28669.1 | 94.2 | 325 | 19 | 0 | 1 | 325 | 1 | 325 | 2.80E-173 | 617.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026725.t1 | Q9SAH9 | 46.6 | 320 | 159 | 5 | 9 | 322 | 4 | 317 | 1.8e-72 | 274.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026725.t1 | A0A072UFZ3 | 94.2 | 325 | 19 | 0 | 1 | 325 | 1 | 325 | 2.0e-173 | 617.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene026725 | MS.gene63037 | PPI |
MS.gene96654 | MS.gene026725 | PPI |
MS.gene026725 | MS.gene65685 | PPI |
MS.gene026725 | MS.gene053809 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026725.t1 | MTR_4g009040 | 95.385 | 325 | 14 | 1 | 1 | 324 | 1 | 325 | 0.0 | 629 |
MS.gene026725.t1 | MTR_4g009040 | 94.225 | 329 | 14 | 2 | 1 | 324 | 1 | 329 | 0.0 | 624 |
MS.gene026725.t1 | MTR_4g009690 | 94.154 | 325 | 19 | 0 | 1 | 325 | 1 | 325 | 0.0 | 610 |
MS.gene026725.t1 | MTR_4g009690 | 93.865 | 326 | 19 | 1 | 1 | 325 | 1 | 326 | 0.0 | 605 |
MS.gene026725.t1 | MTR_4g006940 | 47.077 | 325 | 162 | 4 | 3 | 322 | 7 | 326 | 3.15e-91 | 275 |
MS.gene026725.t1 | MTR_2g104960 | 48.254 | 315 | 153 | 4 | 13 | 322 | 20 | 329 | 7.45e-89 | 270 |
MS.gene026725.t1 | MTR_4g006940 | 50.000 | 278 | 133 | 3 | 3 | 279 | 7 | 279 | 5.04e-84 | 255 |
MS.gene026725.t1 | MTR_4g006940 | 50.000 | 278 | 133 | 3 | 3 | 279 | 7 | 279 | 5.04e-84 | 255 |
MS.gene026725.t1 | MTR_5g072620 | 42.188 | 320 | 176 | 4 | 10 | 322 | 2 | 319 | 1.75e-83 | 255 |
MS.gene026725.t1 | MTR_3g005170 | 43.312 | 314 | 167 | 8 | 13 | 318 | 10 | 320 | 1.26e-79 | 245 |
MS.gene026725.t1 | MTR_3g005210 | 42.587 | 317 | 173 | 6 | 9 | 318 | 2 | 316 | 4.07e-77 | 239 |
MS.gene026725.t1 | MTR_2g101330 | 41.433 | 321 | 177 | 5 | 12 | 324 | 4 | 321 | 1.14e-76 | 238 |
MS.gene026725.t1 | MTR_4g077100 | 43.218 | 317 | 167 | 9 | 11 | 318 | 9 | 321 | 1.62e-76 | 238 |
MS.gene026725.t1 | MTR_8g062440 | 42.056 | 321 | 174 | 8 | 11 | 323 | 6 | 322 | 5.12e-74 | 231 |
MS.gene026725.t1 | MTR_4g077130 | 42.188 | 320 | 172 | 9 | 8 | 318 | 4 | 319 | 6.68e-74 | 231 |
MS.gene026725.t1 | MTR_8g062440 | 42.236 | 322 | 173 | 9 | 11 | 323 | 6 | 323 | 2.79e-73 | 229 |
MS.gene026725.t1 | MTR_3g005170 | 44.649 | 271 | 142 | 7 | 13 | 278 | 10 | 277 | 5.24e-73 | 227 |
MS.gene026725.t1 | MTR_3g031650 | 39.623 | 318 | 187 | 3 | 10 | 322 | 2 | 319 | 1.72e-72 | 227 |
MS.gene026725.t1 | MTR_8g062110 | 41.956 | 317 | 172 | 8 | 10 | 318 | 15 | 327 | 5.14e-72 | 226 |
MS.gene026725.t1 | MTR_8g062110 | 42.089 | 316 | 171 | 8 | 11 | 318 | 7 | 318 | 5.16e-72 | 226 |
MS.gene026725.t1 | MTR_4g077100 | 44.689 | 273 | 143 | 7 | 11 | 278 | 9 | 278 | 1.56e-70 | 221 |
MS.gene026725.t1 | MTR_2g028620 | 40.615 | 325 | 182 | 6 | 8 | 323 | 5 | 327 | 1.64e-70 | 222 |
MS.gene026725.t1 | MTR_3g005170 | 39.490 | 314 | 148 | 8 | 13 | 318 | 10 | 289 | 4.12e-67 | 212 |
MS.gene026725.t1 | MTR_8g062440 | 44.195 | 267 | 142 | 6 | 11 | 273 | 6 | 269 | 1.36e-66 | 212 |
MS.gene026725.t1 | MTR_3g031650 | 40.299 | 268 | 158 | 2 | 10 | 275 | 2 | 269 | 1.25e-65 | 208 |
MS.gene026725.t1 | MTR_8g062110 | 41.259 | 286 | 154 | 7 | 11 | 292 | 7 | 282 | 2.51e-65 | 207 |
MS.gene026725.t1 | MTR_8g062110 | 42.593 | 270 | 148 | 6 | 11 | 276 | 7 | 273 | 4.02e-65 | 207 |
MS.gene026725.t1 | MTR_2g028620 | 43.431 | 274 | 147 | 5 | 8 | 275 | 5 | 276 | 4.64e-65 | 208 |
MS.gene026725.t1 | MTR_5g056600 | 36.278 | 317 | 196 | 4 | 12 | 322 | 3 | 319 | 3.85e-64 | 206 |
MS.gene026725.t1 | MTR_1g022440 | 36.728 | 324 | 191 | 10 | 10 | 322 | 5 | 325 | 4.90e-63 | 203 |
MS.gene026725.t1 | MTR_1g022445 | 36.760 | 321 | 189 | 9 | 13 | 322 | 8 | 325 | 1.15e-60 | 197 |
MS.gene026725.t1 | MTR_4g092080 | 37.764 | 331 | 181 | 10 | 11 | 321 | 12 | 337 | 8.04e-56 | 184 |
MS.gene026725.t1 | MTR_4g081440 | 34.286 | 350 | 198 | 11 | 1 | 324 | 8 | 351 | 3.34e-50 | 171 |
MS.gene026725.t1 | MTR_7g074880 | 34.663 | 326 | 192 | 9 | 12 | 322 | 7 | 326 | 6.74e-50 | 169 |
MS.gene026725.t1 | MTR_7g074820 | 35.890 | 326 | 191 | 9 | 12 | 322 | 7 | 329 | 7.12e-50 | 169 |
MS.gene026725.t1 | MTR_7g074730 | 34.462 | 325 | 196 | 9 | 12 | 322 | 7 | 328 | 7.89e-50 | 169 |
MS.gene026725.t1 | MTR_4g081440 | 33.908 | 348 | 203 | 10 | 1 | 324 | 12 | 356 | 3.74e-49 | 168 |
MS.gene026725.t1 | MTR_7g074850 | 33.333 | 327 | 198 | 10 | 12 | 322 | 7 | 329 | 8.01e-46 | 158 |
MS.gene026725.t1 | MTR_7g074710 | 34.568 | 324 | 195 | 11 | 12 | 322 | 7 | 326 | 1.05e-44 | 155 |
MS.gene026725.t1 | MTR_4g023730 | 35.629 | 334 | 189 | 12 | 8 | 322 | 3 | 329 | 3.63e-43 | 151 |
MS.gene026725.t1 | MTR_8g062710 | 75.532 | 94 | 13 | 1 | 12 | 105 | 19 | 102 | 7.48e-41 | 139 |
MS.gene026725.t1 | MTR_8g062110 | 36.000 | 225 | 134 | 6 | 101 | 318 | 11 | 232 | 2.08e-37 | 134 |
MS.gene026725.t1 | MTR_0164s0070 | 52.756 | 127 | 58 | 2 | 12 | 136 | 4 | 130 | 3.76e-35 | 127 |
MS.gene026725.t1 | MTR_7g074870 | 33.099 | 284 | 171 | 9 | 52 | 322 | 11 | 288 | 8.31e-34 | 125 |
MS.gene026725.t1 | MTR_5g029990 | 30.945 | 307 | 173 | 9 | 13 | 302 | 12 | 296 | 2.44e-33 | 125 |
MS.gene026725.t1 | MTR_8g062110 | 35.196 | 179 | 111 | 4 | 101 | 276 | 11 | 187 | 5.28e-31 | 115 |
MS.gene026725.t1 | MTR_6g406250 | 31.939 | 263 | 169 | 5 | 13 | 268 | 55 | 314 | 5.20e-30 | 117 |
MS.gene026725.t1 | MTR_8g062708 | 79.104 | 67 | 14 | 0 | 213 | 279 | 1 | 67 | 5.63e-30 | 110 |
MS.gene026725.t1 | MTR_2g013230 | 28.488 | 344 | 203 | 11 | 12 | 322 | 7 | 340 | 9.69e-27 | 108 |
MS.gene026725.t1 | MTR_2g013250 | 29.825 | 342 | 197 | 14 | 12 | 320 | 6 | 337 | 8.01e-26 | 105 |
MS.gene026725.t1 | MTR_6g406250 | 31.068 | 206 | 138 | 2 | 13 | 214 | 55 | 260 | 8.02e-25 | 101 |
MS.gene026725.t1 | MTR_7g117190 | 28.440 | 327 | 203 | 11 | 12 | 311 | 6 | 328 | 1.90e-24 | 102 |
MS.gene026725.t1 | MTR_7g117190 | 29.655 | 290 | 174 | 10 | 12 | 275 | 6 | 291 | 3.72e-24 | 100 |
MS.gene026725.t1 | MTR_0685s0030 | 35.000 | 160 | 95 | 4 | 165 | 318 | 2 | 158 | 2.57e-22 | 92.0 |
MS.gene026725.t1 | MTR_2g013260 | 28.739 | 341 | 202 | 13 | 12 | 320 | 7 | 338 | 3.63e-20 | 90.1 |
MS.gene026725.t1 | MTR_2g013260 | 39.073 | 151 | 79 | 7 | 12 | 154 | 7 | 152 | 3.16e-19 | 86.7 |
MS.gene026725.t1 | MTR_0685s0030 | 34.783 | 115 | 73 | 2 | 165 | 278 | 2 | 115 | 1.09e-16 | 75.5 |
MS.gene026725.t1 | MTR_3g011130 | 35.897 | 117 | 70 | 4 | 104 | 216 | 30 | 145 | 2.38e-15 | 72.4 |
MS.gene026725.t1 | MTR_3g101500 | 30.315 | 254 | 148 | 12 | 11 | 256 | 2 | 234 | 1.30e-13 | 70.9 |
MS.gene026725.t1 | MTR_3g101500 | 30.315 | 254 | 148 | 12 | 11 | 256 | 2 | 234 | 1.40e-13 | 70.5 |
MS.gene026725.t1 | MTR_3g101500 | 32.812 | 192 | 106 | 10 | 11 | 199 | 2 | 173 | 9.27e-11 | 61.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026725.t1 | AT2G33590 | 62.620 | 313 | 115 | 1 | 12 | 322 | 8 | 320 | 2.31e-142 | 405 |
MS.gene026725.t1 | AT2G33600 | 59.744 | 313 | 124 | 1 | 12 | 322 | 8 | 320 | 1.03e-128 | 370 |
MS.gene026725.t1 | AT1G76470 | 55.660 | 318 | 135 | 3 | 11 | 322 | 5 | 322 | 9.69e-113 | 330 |
MS.gene026725.t1 | AT1G80820 | 46.082 | 319 | 162 | 4 | 9 | 322 | 4 | 317 | 6.34e-87 | 265 |
MS.gene026725.t1 | AT1G51410 | 45.652 | 322 | 162 | 9 | 11 | 323 | 7 | 324 | 9.21e-85 | 259 |
MS.gene026725.t1 | AT5G19440 | 44.411 | 331 | 170 | 9 | 1 | 323 | 1 | 325 | 6.12e-83 | 254 |
MS.gene026725.t1 | AT1G15950 | 45.283 | 318 | 164 | 4 | 10 | 322 | 10 | 322 | 3.28e-82 | 253 |
MS.gene026725.t1 | AT1G15950 | 45.283 | 318 | 164 | 4 | 10 | 322 | 10 | 322 | 3.28e-82 | 253 |
MS.gene026725.t1 | AT1G09510 | 45.963 | 322 | 165 | 6 | 8 | 322 | 3 | 322 | 6.62e-82 | 251 |
MS.gene026725.t1 | AT1G80820 | 49.632 | 272 | 131 | 3 | 9 | 279 | 4 | 270 | 7.93e-80 | 244 |
MS.gene026725.t1 | AT1G15950 | 45.130 | 308 | 159 | 4 | 10 | 312 | 10 | 312 | 7.43e-79 | 244 |
MS.gene026725.t1 | AT1G15950 | 48.551 | 276 | 136 | 3 | 10 | 284 | 10 | 280 | 1.95e-78 | 241 |
MS.gene026725.t1 | AT1G15950 | 49.084 | 273 | 133 | 3 | 10 | 281 | 10 | 277 | 3.46e-78 | 241 |
MS.gene026725.t1 | AT5G58490 | 42.222 | 315 | 177 | 3 | 13 | 322 | 9 | 323 | 5.03e-78 | 241 |
MS.gene026725.t1 | AT1G15950 | 49.077 | 271 | 132 | 3 | 10 | 279 | 10 | 275 | 3.88e-77 | 238 |
MS.gene026725.t1 | AT1G09490 | 41.195 | 318 | 180 | 5 | 11 | 322 | 6 | 322 | 7.68e-75 | 233 |
MS.gene026725.t1 | AT1G09480 | 42.138 | 318 | 177 | 5 | 11 | 322 | 6 | 322 | 1.55e-73 | 230 |
MS.gene026725.t1 | AT1G09480 | 41.641 | 329 | 183 | 6 | 2 | 322 | 42 | 369 | 3.53e-73 | 230 |
MS.gene026725.t1 | AT4G35420 | 40.867 | 323 | 175 | 7 | 12 | 324 | 7 | 323 | 3.77e-73 | 229 |
MS.gene026725.t1 | AT2G02400 | 38.170 | 317 | 185 | 6 | 13 | 322 | 6 | 318 | 5.20e-73 | 228 |
MS.gene026725.t1 | AT1G66800 | 43.574 | 319 | 167 | 7 | 11 | 322 | 6 | 318 | 9.01e-73 | 228 |
MS.gene026725.t1 | AT1G09500 | 40.557 | 323 | 184 | 5 | 8 | 322 | 3 | 325 | 9.13e-71 | 223 |
MS.gene026725.t1 | AT1G09500 | 43.333 | 270 | 150 | 3 | 8 | 274 | 3 | 272 | 7.15e-68 | 214 |
MS.gene026725.t1 | AT5G42800 | 39.697 | 330 | 179 | 10 | 7 | 322 | 2 | 325 | 2.30e-64 | 208 |
MS.gene026725.t1 | AT1G09490 | 38.571 | 280 | 166 | 4 | 48 | 322 | 13 | 291 | 4.06e-58 | 189 |
MS.gene026725.t1 | AT1G09500 | 38.652 | 282 | 166 | 4 | 48 | 322 | 10 | 291 | 7.17e-54 | 178 |
MS.gene026725.t1 | AT1G25460 | 34.921 | 315 | 197 | 5 | 15 | 322 | 6 | 319 | 9.77e-53 | 176 |
MS.gene026725.t1 | AT1G68540 | 34.177 | 316 | 200 | 5 | 15 | 322 | 6 | 321 | 3.00e-52 | 175 |
MS.gene026725.t1 | AT2G45400 | 36.036 | 333 | 182 | 11 | 13 | 322 | 40 | 364 | 1.04e-49 | 169 |
MS.gene026725.t1 | AT1G61720 | 34.234 | 333 | 200 | 10 | 10 | 325 | 10 | 340 | 9.03e-46 | 159 |
MS.gene026725.t1 | AT4G27250 | 33.131 | 329 | 197 | 9 | 1 | 311 | 1 | 324 | 9.82e-46 | 159 |
MS.gene026725.t1 | AT4G27250 | 33.432 | 338 | 194 | 10 | 1 | 311 | 1 | 334 | 4.79e-45 | 157 |
MS.gene026725.t1 | AT1G15950 | 41.071 | 224 | 127 | 2 | 104 | 322 | 1 | 224 | 4.86e-45 | 154 |
MS.gene026725.t1 | AT2G45400 | 36.620 | 284 | 157 | 8 | 13 | 279 | 40 | 317 | 5.90e-44 | 153 |
MS.gene026725.t1 | AT2G23910 | 32.609 | 276 | 167 | 7 | 14 | 281 | 11 | 275 | 1.05e-41 | 146 |
MS.gene026725.t1 | AT2G23910 | 32.841 | 271 | 160 | 7 | 14 | 273 | 11 | 270 | 2.84e-41 | 145 |
MS.gene026725.t1 | AT2G23910 | 32.841 | 271 | 160 | 7 | 14 | 273 | 11 | 270 | 4.00e-41 | 145 |
MS.gene026725.t1 | AT4G30470 | 33.455 | 275 | 165 | 7 | 14 | 281 | 11 | 274 | 8.28e-39 | 139 |
MS.gene026725.t1 | AT2G45400 | 33.438 | 317 | 180 | 12 | 27 | 322 | 1 | 307 | 3.68e-38 | 138 |
MS.gene026725.t1 | AT2G45400 | 39.726 | 219 | 115 | 6 | 13 | 218 | 40 | 254 | 2.01e-35 | 129 |
MS.gene026725.t1 | AT2G23910 | 32.051 | 234 | 138 | 6 | 50 | 273 | 14 | 236 | 4.48e-31 | 118 |
MS.gene026725.t1 | AT1G68540 | 33.333 | 207 | 133 | 3 | 121 | 322 | 8 | 214 | 8.78e-31 | 115 |
MS.gene026725.t1 | AT5G14700 | 33.700 | 273 | 163 | 8 | 9 | 268 | 51 | 318 | 1.10e-30 | 119 |
MS.gene026725.t1 | AT5G14700 | 33.488 | 215 | 131 | 5 | 10 | 214 | 52 | 264 | 9.09e-25 | 102 |
Find 66 sgRNAs with CRISPR-Local
Find 201 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATCTGTCCTACTCTTGTTT+TGG | 0.183395 | 4.1:+85997854 | MS.gene026725:CDS |
CTCAGAGAAACTTCAAAGTT+TGG | 0.233591 | 4.1:+85999062 | MS.gene026725:CDS |
TCATCAATCGCTTTATCTTT+TGG | 0.244785 | 4.1:-85997579 | None:intergenic |
TTCAGCAAGTGTTCATATTT+CGG | 0.273006 | 4.1:-85997100 | None:intergenic |
AATAAGAAGGTGTGTGTAAC+TGG | 0.296410 | 4.1:+85995789 | MS.gene026725:CDS |
ATATGAACACTTGCTGAAAC+TGG | 0.323661 | 4.1:+85997105 | MS.gene026725:CDS |
TCCAAAGGTTACTTTGTTCA+TGG | 0.324606 | 4.1:+85995855 | MS.gene026725:CDS |
AAAGTTTGGGTTGGAAATTC+AGG | 0.331619 | 4.1:+85999076 | MS.gene026725:CDS |
CACTATCGTCACACGAGATT+TGG | 0.336161 | 4.1:+85998471 | MS.gene026725:CDS |
CTGTTCTTCTGCTTCTGTCT+TGG | 0.343397 | 4.1:-85997790 | None:intergenic |
ACTCTTCAAAGCAGATATCT+TGG | 0.353367 | 4.1:+85997150 | MS.gene026725:CDS |
CTTCGTAGGGTACTTGTAGT+TGG | 0.358423 | 4.1:-85998518 | None:intergenic |
TTTGTGGTTGACTGTAAAAT+TGG | 0.363006 | 4.1:-85997879 | None:intergenic |
CTGGATTTCGCGAAAAGAAC+TGG | 0.363819 | 4.1:+85997816 | MS.gene026725:CDS |
TCAGAGAAACTTCAAAGTTT+GGG | 0.368243 | 4.1:+85999063 | MS.gene026725:CDS |
CAAGACAGAAGCAGAAGAAC+AGG | 0.371007 | 4.1:+85997791 | MS.gene026725:CDS |
CGTAGTTGATGCAATACTAT+TGG | 0.378535 | 4.1:+85998402 | MS.gene026725:CDS |
AGAAACATTACCTCAGGATT+AGG | 0.383683 | 4.1:-85997253 | None:intergenic |
TCCGTTTACTCCGCAATTGT+TGG | 0.399978 | 4.1:+85997181 | MS.gene026725:CDS |
TCCATGAACAAAGTAACCTT+TGG | 0.412376 | 4.1:-85995856 | None:intergenic |
TCCAACAATTGCGGAGTAAA+CGG | 0.413187 | 4.1:-85997182 | None:intergenic |
TGACTCTGTTGAGAGCTATA+AGG | 0.425631 | 4.1:+85999119 | MS.gene026725:CDS |
TTCGTAGGGTACTTGTAGTT+GGG | 0.439609 | 4.1:-85998517 | None:intergenic |
TTAGCAGTTCCCTTCACTGC+AGG | 0.441855 | 4.1:-85997471 | None:intergenic |
AGCCAAGCTACTTGAATTTG+TGG | 0.447809 | 4.1:-85997895 | None:intergenic |
AAGCGATTGATGAGTCTTGT+TGG | 0.452091 | 4.1:+85997589 | MS.gene026725:CDS |
CATTGGAGAATAAGTTTCGT+TGG | 0.455684 | 4.1:+85998362 | MS.gene026725:CDS |
TATCTGCTTTGAAGAGTGTA+AGG | 0.460836 | 4.1:-85997144 | None:intergenic |
GAAACTGAAGCTTACTTCGT+AGG | 0.466736 | 4.1:-85998532 | None:intergenic |
AGAAACTTCAAAGTTTGGGT+TGG | 0.469337 | 4.1:+85999067 | MS.gene026725:CDS |
AGAAGCAGAAGAACAGGCCC+TGG | 0.487109 | 4.1:+85997797 | MS.gene026725:CDS |
GGTACAACTGTTGAAGGTAC+AGG | 0.487565 | 4.1:-85997232 | None:intergenic |
CATGGAACTGTTAGAGAGCC+TGG | 0.490180 | 4.1:+85995873 | MS.gene026725:CDS |
AAGGTGTGTGTAACTGGAGC+AGG | 0.505575 | 4.1:+85995795 | MS.gene026725:CDS |
CAGGAGGGTTTGTAGCATCA+TGG | 0.506329 | 4.1:+85995814 | MS.gene026725:CDS |
GGATTAGGTACAACTGTTGA+AGG | 0.511645 | 4.1:-85997238 | None:intergenic |
AACCACAAATTCAAGTAGCT+TGG | 0.514881 | 4.1:+85997893 | MS.gene026725:CDS |
GGGTTGGAAATTCAGGCCAT+TGG | 0.519755 | 4.1:+85999083 | MS.gene026725:CDS |
TATCGTCACACGAGATTTGG+TGG | 0.521160 | 4.1:+85998474 | MS.gene026725:CDS |
GTTAAGCTTCTTCTTTCCAA+AGG | 0.521805 | 4.1:+85995840 | MS.gene026725:CDS |
GTTGAGAGCTATAAGGAGGC+TGG | 0.522498 | 4.1:+85999126 | MS.gene026725:CDS |
TTGGAAATTCAGGCCATTGG+AGG | 0.526899 | 4.1:+85999086 | MS.gene026725:CDS |
AAACTGAAGCTTACTTCGTA+GGG | 0.530500 | 4.1:-85998531 | None:intergenic |
TCAATGAGTGTTTCCTCCAA+TGG | 0.543548 | 4.1:-85999099 | None:intergenic |
ATTAGAAGGCTGTGACACAT+TGG | 0.558259 | 4.1:+85998345 | MS.gene026725:intron |
ATGAGAATCACAAGGCAGGC+GGG | 0.566882 | 4.1:+85998428 | MS.gene026725:CDS |
GTGATTGAGCCTGCAGTGAA+GGG | 0.570026 | 4.1:+85997462 | MS.gene026725:CDS |
ATTGGTCCCAAAACAAGAGT+AGG | 0.572490 | 4.1:-85997861 | None:intergenic |
GTGTGTGTAACTGGAGCAGG+AGG | 0.579894 | 4.1:+85995798 | MS.gene026725:CDS |
AGTGATTGAGCCTGCAGTGA+AGG | 0.582476 | 4.1:+85997461 | MS.gene026725:CDS |
AAGGTACAGGGCTAGCAACA+TGG | 0.584108 | 4.1:-85997219 | None:intergenic |
GCGTGTTAATAACAATAAGA+AGG | 0.588155 | 4.1:+85995776 | MS.gene026725:CDS |
GCTTATGAGAATCACAAGGC+AGG | 0.595581 | 4.1:+85998424 | MS.gene026725:CDS |
TGCTGGCAGCTATATTGAGA+TGG | 0.610431 | 4.1:+85999020 | MS.gene026725:intron |
CAAAACAAGAGTAGGACAGA+TGG | 0.610913 | 4.1:-85997853 | None:intergenic |
TATGAGAATCACAAGGCAGG+CGG | 0.620932 | 4.1:+85998427 | MS.gene026725:CDS |
TGCACTGCATCCAACAATTG+CGG | 0.621267 | 4.1:-85997191 | None:intergenic |
GTACAACTGTTGAAGGTACA+GGG | 0.621515 | 4.1:-85997231 | None:intergenic |
GAGGAGATAATGGAAACAAG+TGG | 0.622834 | 4.1:+85995753 | None:intergenic |
AGCTTGTCTCAAAGCTAATG+TGG | 0.639403 | 4.1:+85997503 | MS.gene026725:CDS |
CTCTGTTGAGAGCTATAAGG+AGG | 0.642841 | 4.1:+85999122 | MS.gene026725:CDS |
AGGAGATAATGGAAACAAGT+GGG | 0.654416 | 4.1:+85995754 | None:intergenic |
GAAAAGAACTGGACTTAACG+TGG | 0.670351 | 4.1:+85997827 | MS.gene026725:CDS |
AACAGTTGTACCTAATCCTG+AGG | 0.672409 | 4.1:+85997243 | MS.gene026725:CDS |
TGTGTGTAACTGGAGCAGGA+GGG | 0.744318 | 4.1:+85995799 | MS.gene026725:CDS |
ATTGGCTTATGAGAATCACA+AGG | 0.744545 | 4.1:+85998420 | MS.gene026725:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAGAATTTCATTATTATATA+TGG | + | chr4.1:85996256-85996275 | MS.gene026725:intron | 10.0% |
!! | AATATCTTAAATATATATAC+AGG | - | chr4.1:85996572-85996591 | None:intergenic | 10.0% |
!!! | CTAATAATATTTAATTTAAG+TGG | - | chr4.1:85998580-85998599 | None:intergenic | 10.0% |
!!! | GTATTCTTTTTTTTTTTTTT+TGG | + | chr4.1:85996028-85996047 | MS.gene026725:intron | 10.0% |
!!! | TGAAATTTGTTAAATTATAA+TGG | - | chr4.1:85998266-85998285 | None:intergenic | 10.0% |
!!! | TTTTTAATAAGAATTTGATA+AGG | - | chr4.1:85997955-85997974 | None:intergenic | 10.0% |
!! | ATTATATATGGAAAGAAATA+AGG | + | chr4.1:85996268-85996287 | MS.gene026725:intron | 15.0% |
!! | ATTATTTACTTTGTCTTATA+AGG | + | chr4.1:85996899-85996918 | MS.gene026725:intron | 15.0% |
!!! | ATTTGAAGTTTTAAGAAATA+TGG | - | chr4.1:85996953-85996972 | None:intergenic | 15.0% |
!!! | TAATATTTAATTTAAGTGGT+TGG | - | chr4.1:85998576-85998595 | None:intergenic | 15.0% |
!! | CTTATTTAACACAAAATTCT+TGG | - | chr4.1:85997731-85997750 | None:intergenic | 20.0% |
!! | TATCATTATCATGTAAAACA+AGG | - | chr4.1:85998015-85998034 | None:intergenic | 20.0% |
!! | TTCATCTTATCTTTATTAGA+AGG | + | chr4.1:85998331-85998350 | MS.gene026725:intron | 20.0% |
!!! | ATTTGTTAAATTATAATGGC+AGG | - | chr4.1:85998262-85998281 | None:intergenic | 20.0% |
!!! | CTTTATCTTTTGGTAAATTA+GGG | - | chr4.1:85997572-85997591 | None:intergenic | 20.0% |
!!! | TGATACATACTTCAATTTTA+GGG | + | chr4.1:85996352-85996371 | MS.gene026725:intron | 20.0% |
!!! | TTGATACATACTTCAATTTT+AGG | + | chr4.1:85996351-85996370 | MS.gene026725:intron | 20.0% |
! | ACATGTTTACTAGAATTTGT+AGG | - | chr4.1:85996823-85996842 | None:intergenic | 25.0% |
! | ACTGTTAATGTCAAAAACAT+AGG | + | chr4.1:85996516-85996535 | MS.gene026725:intron | 25.0% |
! | ATAGAAGTCATTAATTAGTG+AGG | + | chr4.1:85998679-85998698 | MS.gene026725:intron | 25.0% |
! | CATAACTTCTATAAAATCCT+TGG | + | chr4.1:85998039-85998058 | MS.gene026725:intron | 25.0% |
! | CCAATGACAATTTGAAAAAA+CGG | - | chr4.1:85998905-85998924 | None:intergenic | 25.0% |
! | TCAAAAGAATGAAAGAATAG+AGG | - | chr4.1:85997025-85997044 | None:intergenic | 25.0% |
! | TTTGTATAGAATTGTTGAAG+AGG | + | chr4.1:85996988-85997007 | MS.gene026725:intron | 25.0% |
!! | AGGATTTTATAGAAGTTATG+TGG | - | chr4.1:85998039-85998058 | None:intergenic | 25.0% |
!! | GCTCTCATCAAAATTTTAAA+AGG | + | chr4.1:85997915-85997934 | MS.gene026725:CDS | 25.0% |
!! | GCTTTATCTTTTGGTAAATT+AGG | - | chr4.1:85997573-85997592 | None:intergenic | 25.0% |
!! | TATGTTAAAGTTTTCATTGC+TGG | + | chr4.1:85999003-85999022 | MS.gene026725:intron | 25.0% |
!! | TCTATTCTTTCATTCTTTTG+AGG | + | chr4.1:85997024-85997043 | MS.gene026725:intron | 25.0% |
!!! | TCATTTAGACAATTAGCTTT+TGG | - | chr4.1:85996397-85996416 | None:intergenic | 25.0% |
!!! | TTCAATTTTAGGGACTAAAA+TGG | + | chr4.1:85996362-85996381 | MS.gene026725:intron | 25.0% |
!!! | TTTTAGCCTTTATAAGTGTA+TGG | + | chr4.1:85998102-85998121 | MS.gene026725:intron | 25.0% |
AACATTAGAAACATTACCTC+AGG | - | chr4.1:85997262-85997281 | None:intergenic | 30.0% | |
AATTATGAATATGCCCTTCA+TGG | + | chr4.1:85998210-85998229 | MS.gene026725:intron | 30.0% | |
ACTTGCTTGTATAGATTTGA+TGG | + | chr4.1:85998971-85998990 | MS.gene026725:intron | 30.0% | |
AGACTACTGCAAAAATACTA+AGG | + | chr4.1:85997620-85997639 | MS.gene026725:CDS | 30.0% | |
ATGGAAAGAAATAAGGCTTA+AGG | + | chr4.1:85996275-85996294 | MS.gene026725:intron | 30.0% | |
ATTATGAATATGCCCTTCAT+GGG | + | chr4.1:85998211-85998230 | MS.gene026725:intron | 30.0% | |
ATTTGATAAGGCGTATTAGT+AGG | - | chr4.1:85997943-85997962 | None:intergenic | 30.0% | |
GCGTGTTAATAACAATAAGA+AGG | + | chr4.1:85995776-85995795 | MS.gene026725:CDS | 30.0% | |
TCAAATCTATACAAGCAAGT+AGG | - | chr4.1:85998971-85998990 | None:intergenic | 30.0% | |
TCAGAGAAACTTCAAAGTTT+GGG | + | chr4.1:85999063-85999082 | MS.gene026725:CDS | 30.0% | |
TCTCTACTAGAATAACAAGT+TGG | + | chr4.1:85996793-85996812 | MS.gene026725:intron | 30.0% | |
TTCAGCAAGTGTTCATATTT+CGG | - | chr4.1:85997103-85997122 | None:intergenic | 30.0% | |
TTTGTGGTTGACTGTAAAAT+TGG | - | chr4.1:85997882-85997901 | None:intergenic | 30.0% | |
! | CATTACTTGCAATTTTTCCT+TGG | - | chr4.1:85998780-85998799 | None:intergenic | 30.0% |
! | TCATCAATCGCTTTATCTTT+TGG | - | chr4.1:85997582-85997601 | None:intergenic | 30.0% |
!! | AACTTGTTATTCTAGTAGAG+AGG | - | chr4.1:85996794-85996813 | None:intergenic | 30.0% |
!!! | CCGTTTTTTCAAATTGTCAT+TGG | + | chr4.1:85998902-85998921 | MS.gene026725:intron | 30.0% |
!!! | TTTTTTTTTGGCTTTTGCAC+CGG | + | chr4.1:85996040-85996059 | MS.gene026725:intron | 30.0% |
AAACTGAAGCTTACTTCGTA+GGG | - | chr4.1:85998534-85998553 | None:intergenic | 35.0% | |
AACCACAAATTCAAGTAGCT+TGG | + | chr4.1:85997893-85997912 | MS.gene026725:CDS | 35.0% | |
ACTCTTCAAAGCAGATATCT+TGG | + | chr4.1:85997150-85997169 | MS.gene026725:CDS | 35.0% | |
AGAAACATTACCTCAGGATT+AGG | - | chr4.1:85997256-85997275 | None:intergenic | 35.0% | |
AGAAACTTCAAAGTTTGGGT+TGG | + | chr4.1:85999067-85999086 | MS.gene026725:CDS | 35.0% | |
ATACTTGAAGCTTAATCTGC+AGG | + | chr4.1:85997434-85997453 | MS.gene026725:intron | 35.0% | |
CATTGGAGAATAAGTTTCGT+TGG | + | chr4.1:85998362-85998381 | MS.gene026725:CDS | 35.0% | |
CTCAGAGAAACTTCAAAGTT+TGG | + | chr4.1:85999062-85999081 | MS.gene026725:CDS | 35.0% | |
CTGACAATCTTTCAACTTAC+TGG | - | chr4.1:85997337-85997356 | None:intergenic | 35.0% | |
CTGTAAGAGAGATCAAAAGA+AGG | + | chr4.1:85996314-85996333 | MS.gene026725:intron | 35.0% | |
CTTCACCGTTATATTGTTCT+GGG | + | chr4.1:85998140-85998159 | MS.gene026725:intron | 35.0% | |
GGTTGAAAACAGAACACAAA+GGG | - | chr4.1:85996731-85996750 | None:intergenic | 35.0% | |
GTATGGCCATACACTTATAA+AGG | - | chr4.1:85998111-85998130 | None:intergenic | 35.0% | |
GTTAAGCTTCTTCTTTCCAA+AGG | + | chr4.1:85995840-85995859 | MS.gene026725:CDS | 35.0% | |
TATTTGGAAAGGTCACATAC+AGG | - | chr4.1:85996764-85996783 | None:intergenic | 35.0% | |
TCCATGAACAAAGTAACCTT+TGG | - | chr4.1:85995859-85995878 | None:intergenic | 35.0% | |
TGGTTGAAAACAGAACACAA+AGG | - | chr4.1:85996732-85996751 | None:intergenic | 35.0% | |
TTATGAATATGCCCTTCATG+GGG | + | chr4.1:85998212-85998231 | MS.gene026725:intron | 35.0% | |
TTGAGTCATGAGAAAAACCA+AGG | + | chr4.1:85998760-85998779 | MS.gene026725:intron | 35.0% | |
TTGCAAGTAATGTTGTTCGA+TGG | + | chr4.1:85998788-85998807 | MS.gene026725:intron | 35.0% | |
! | AATAAGAAGGTGTGTGTAAC+TGG | + | chr4.1:85995789-85995808 | MS.gene026725:CDS | 35.0% |
! | ATATGAACACTTGCTGAAAC+TGG | + | chr4.1:85997105-85997124 | MS.gene026725:CDS | 35.0% |
! | ATTGGCTTATGAGAATCACA+AGG | + | chr4.1:85998420-85998439 | MS.gene026725:CDS | 35.0% |
! | CGTAGTTGATGCAATACTAT+TGG | + | chr4.1:85998402-85998421 | MS.gene026725:CDS | 35.0% |
! | CTACTAGAATAACAAGTTGG+TGG | + | chr4.1:85996796-85996815 | MS.gene026725:intron | 35.0% |
! | TCCAAAGGTTACTTTGTTCA+TGG | + | chr4.1:85995855-85995874 | MS.gene026725:CDS | 35.0% |
! | TTTTGCAAGTTGCTACGTAT+TGG | - | chr4.1:85996427-85996446 | None:intergenic | 35.0% |
!! | AAAGTTTGGGTTGGAAATTC+AGG | + | chr4.1:85999076-85999095 | MS.gene026725:CDS | 35.0% |
!! | AGCTTCAGTTTCTAAAGTAG+TGG | + | chr4.1:85998543-85998562 | MS.gene026725:intron | 35.0% |
!! | ATTGGTGTCAGTATTGTGTT+TGG | + | chr4.1:85998920-85998939 | MS.gene026725:intron | 35.0% |
!! | TATCTGCTTTGAAGAGTGTA+AGG | - | chr4.1:85997147-85997166 | None:intergenic | 35.0% |
!!! | ATCTGTCCTACTCTTGTTTT+GGG | + | chr4.1:85997855-85997874 | MS.gene026725:CDS | 35.0% |
AACAGTTGTACCTAATCCTG+AGG | + | chr4.1:85997243-85997262 | MS.gene026725:CDS | 40.0% | |
AAGGCAAAACTAGAACCACA+CGG | - | chr4.1:85997299-85997318 | None:intergenic | 40.0% | |
AATCCTTGGTCATGTAACAG+TGG | + | chr4.1:85998053-85998072 | MS.gene026725:intron | 40.0% | |
AGCCAAGCTACTTGAATTTG+TGG | - | chr4.1:85997898-85997917 | None:intergenic | 40.0% | |
AGCTTGTCTCAAAGCTAATG+TGG | + | chr4.1:85997503-85997522 | MS.gene026725:CDS | 40.0% | |
ATACCACTGTTACATGACCA+AGG | - | chr4.1:85998059-85998078 | None:intergenic | 40.0% | |
ATGAGATGAGAAATAGCACC+AGG | - | chr4.1:85995894-85995913 | None:intergenic | 40.0% | |
ATTAGAAGGCTGTGACACAT+TGG | + | chr4.1:85998345-85998364 | MS.gene026725:intron | 40.0% | |
ATTGGTCCCAAAACAAGAGT+AGG | - | chr4.1:85997864-85997883 | None:intergenic | 40.0% | |
CAAAACAAGAGTAGGACAGA+TGG | - | chr4.1:85997856-85997875 | None:intergenic | 40.0% | |
CCGAAAAATATCCCCATGAA+GGG | - | chr4.1:85998226-85998245 | None:intergenic | 40.0% | |
CCTATGATGGTCATAAATGG+AGG | - | chr4.1:85996474-85996493 | None:intergenic | 40.0% | |
CCTCCATTTATGACCATCAT+AGG | + | chr4.1:85996471-85996490 | MS.gene026725:intron | 40.0% | |
CGACTCCCAGAACAATATAA+CGG | - | chr4.1:85998148-85998167 | None:intergenic | 40.0% | |
CTTCACATATGATCCAGAAC+TGG | + | chr4.1:85997757-85997776 | MS.gene026725:intron | 40.0% | |
CTTTGTAGCTTCAAAACCTC+AGG | + | chr4.1:85998815-85998834 | MS.gene026725:intron | 40.0% | |
GAAAAGAACTGGACTTAACG+TGG | + | chr4.1:85997827-85997846 | MS.gene026725:CDS | 40.0% | |
GAAACTGAAGCTTACTTCGT+AGG | - | chr4.1:85998535-85998554 | None:intergenic | 40.0% | |
GAACAATATAACGGTGAAGC+AGG | - | chr4.1:85998139-85998158 | None:intergenic | 40.0% | |
GAGGCTTGAACTATTTGGAA+AGG | - | chr4.1:85996775-85996794 | None:intergenic | 40.0% | |
GCTTCACCGTTATATTGTTC+TGG | + | chr4.1:85998139-85998158 | MS.gene026725:intron | 40.0% | |
GGATTAGGTACAACTGTTGA+AGG | - | chr4.1:85997241-85997260 | None:intergenic | 40.0% | |
GGTCCTATGATGGTCATAAA+TGG | - | chr4.1:85996477-85996496 | None:intergenic | 40.0% | |
GTAGAGAGGCTTGAACTATT+TGG | - | chr4.1:85996780-85996799 | None:intergenic | 40.0% | |
TATGTATGTCAGACAACTGC+AGG | + | chr4.1:85997073-85997092 | MS.gene026725:intron | 40.0% | |
TCAATGAGTGTTTCCTCCAA+TGG | - | chr4.1:85999102-85999121 | None:intergenic | 40.0% | |
TCCAACAATTGCGGAGTAAA+CGG | - | chr4.1:85997185-85997204 | None:intergenic | 40.0% | |
TCTCTTATATAGTCACCGTG+TGG | + | chr4.1:85997281-85997300 | MS.gene026725:intron | 40.0% | |
TGACTCTGTTGAGAGCTATA+AGG | + | chr4.1:85999119-85999138 | MS.gene026725:CDS | 40.0% | |
TGGCATAACAATACCAGTTC+TGG | - | chr4.1:85997773-85997792 | None:intergenic | 40.0% | |
! | AAGCGATTGATGAGTCTTGT+TGG | + | chr4.1:85997589-85997608 | MS.gene026725:CDS | 40.0% |
! | AGTTCTTTTCGCGAAATCCA+GGG | - | chr4.1:85997817-85997836 | None:intergenic | 40.0% |
! | CCCTTCATGGGGATATTTTT+CGG | + | chr4.1:85998223-85998242 | MS.gene026725:intron | 40.0% |
! | GTACAACTGTTGAAGGTACA+GGG | - | chr4.1:85997234-85997253 | None:intergenic | 40.0% |
! | TTCGTAGGGTACTTGTAGTT+GGG | - | chr4.1:85998520-85998539 | None:intergenic | 40.0% |
!! | CATCTGTCCTACTCTTGTTT+TGG | + | chr4.1:85997854-85997873 | MS.gene026725:CDS | 40.0% |
!! | CGTTATATTGTTCTGGGAGT+CGG | + | chr4.1:85998146-85998165 | MS.gene026725:intron | 40.0% |
!!! | TGGTTCTAGTTTTGCCTTCA+TGG | + | chr4.1:85997301-85997320 | MS.gene026725:intron | 40.0% |
!!! | TGTCACTGCAGACTTTTTCA+TGG | - | chr4.1:85997408-85997427 | None:intergenic | 40.0% |
AATACCGGGTTCGATTCCTA+GGG | - | chr4.1:85996140-85996159 | None:intergenic | 45.0% | |
AGTGAGGCGATCATCTGTTA+CGG | + | chr4.1:85998695-85998714 | MS.gene026725:intron | 45.0% | |
ATTAGTCGTCCACCATTGGT+GGG | - | chr4.1:85996073-85996092 | None:intergenic | 45.0% | |
CAAGACAGAAGCAGAAGAAC+AGG | + | chr4.1:85997791-85997810 | MS.gene026725:CDS | 45.0% | |
CACTATCGTCACACGAGATT+TGG | + | chr4.1:85998471-85998490 | MS.gene026725:CDS | 45.0% | |
CTCTGTTGAGAGCTATAAGG+AGG | + | chr4.1:85999122-85999141 | MS.gene026725:CDS | 45.0% | |
CTGGATTTCGCGAAAAGAAC+TGG | + | chr4.1:85997816-85997835 | MS.gene026725:CDS | 45.0% | |
CTGTTCTTCTGCTTCTGTCT+TGG | - | chr4.1:85997793-85997812 | None:intergenic | 45.0% | |
CTTGAAGCTTAATCTGCAGG+TGG | + | chr4.1:85997437-85997456 | MS.gene026725:intron | 45.0% | |
GAAAGGTCACATACAGGTCA+TGG | - | chr4.1:85996758-85996777 | None:intergenic | 45.0% | |
GACACACGTTAGACACTTCT+TGG | - | chr4.1:85996605-85996624 | None:intergenic | 45.0% | |
GCCGAAAAATATCCCCATGA+AGG | - | chr4.1:85998227-85998246 | None:intergenic | 45.0% | |
GCTTATGAGAATCACAAGGC+AGG | + | chr4.1:85998424-85998443 | MS.gene026725:CDS | 45.0% | |
TATAACGGTGAAGCAGGTAG+TGG | - | chr4.1:85998133-85998152 | None:intergenic | 45.0% | |
TATCGTCACACGAGATTTGG+TGG | + | chr4.1:85998474-85998493 | MS.gene026725:CDS | 45.0% | |
TATGAGAATCACAAGGCAGG+CGG | + | chr4.1:85998427-85998446 | MS.gene026725:CDS | 45.0% | |
TCACATACAGGTCATGGAGT+TGG | - | chr4.1:85996752-85996771 | None:intergenic | 45.0% | |
TCCGTTTACTCCGCAATTGT+TGG | + | chr4.1:85997181-85997200 | MS.gene026725:CDS | 45.0% | |
TGCACTGCATCCAACAATTG+CGG | - | chr4.1:85997194-85997213 | None:intergenic | 45.0% | |
TGCTGGCAGCTATATTGAGA+TGG | + | chr4.1:85999020-85999039 | MS.gene026725:intron | 45.0% | |
TTGGAAATTCAGGCCATTGG+AGG | + | chr4.1:85999086-85999105 | MS.gene026725:CDS | 45.0% | |
! | CAGTTCTTTTCGCGAAATCC+AGG | - | chr4.1:85997818-85997837 | None:intergenic | 45.0% |
! | CTGGTGTCTTTTCACCATGA+AGG | - | chr4.1:85997318-85997337 | None:intergenic | 45.0% |
! | CTTCGTAGGGTACTTGTAGT+TGG | - | chr4.1:85998521-85998540 | None:intergenic | 45.0% |
! | GGTACAACTGTTGAAGGTAC+AGG | - | chr4.1:85997235-85997254 | None:intergenic | 45.0% |
!! | GCTTCAAAACCTCAGGTTGA+AGG | + | chr4.1:85998822-85998841 | MS.gene026725:intron | 45.0% |
!! | AAAAAAAATTGAAAATTAAT+AGG | - | chr4.1:85995921-85995940 | None:intergenic | 5.0% |
AAGGTGTGTGTAACTGGAGC+AGG | + | chr4.1:85995795-85995814 | MS.gene026725:CDS | 50.0% | |
ACCATCATAGGACCCTGACA+CGG | + | chr4.1:85996483-85996502 | MS.gene026725:intron | 50.0% | |
AGTGATTGAGCCTGCAGTGA+AGG | + | chr4.1:85997461-85997480 | MS.gene026725:CDS | 50.0% | |
ATACCGGGTTCGATTCCTAG+GGG | - | chr4.1:85996139-85996158 | None:intergenic | 50.0% | |
ATGAGAATCACAAGGCAGGC+GGG | + | chr4.1:85998428-85998447 | MS.gene026725:CDS | 50.0% | |
CAGGAGGGTTTGTAGCATCA+TGG | + | chr4.1:85995814-85995833 | MS.gene026725:CDS | 50.0% | |
CATGGAACTGTTAGAGAGCC+TGG | + | chr4.1:85995873-85995892 | MS.gene026725:CDS | 50.0% | |
CCAAGTTGCTTGCGCTTTAG+TGG | - | chr4.1:85996194-85996213 | None:intergenic | 50.0% | |
CCACTAAAGCGCAAGCAACT+TGG | + | chr4.1:85996191-85996210 | MS.gene026725:intron | 50.0% | |
CTAATCCGGCTCATGCGTAA+AGG | + | chr4.1:85996088-85996107 | MS.gene026725:intron | 50.0% | |
GAATACCGGGTTCGATTCCT+AGG | - | chr4.1:85996141-85996160 | None:intergenic | 50.0% | |
GACTCGTGTCGAATACAGAG+AGG | + | chr4.1:85996665-85996684 | MS.gene026725:intron | 50.0% | |
GGGTTGGAAATTCAGGCCAT+TGG | + | chr4.1:85999083-85999102 | MS.gene026725:CDS | 50.0% | |
GTGATTGAGCCTGCAGTGAA+GGG | + | chr4.1:85997462-85997481 | MS.gene026725:CDS | 50.0% | |
GTGGCAATGAGCTCCTTCTA+AGG | - | chr4.1:85996175-85996194 | None:intergenic | 50.0% | |
GTTGAGAGCTATAAGGAGGC+TGG | + | chr4.1:85999126-85999145 | MS.gene026725:CDS | 50.0% | |
TGTGTGTAACTGGAGCAGGA+GGG | + | chr4.1:85995799-85995818 | MS.gene026725:CDS | 50.0% | |
TTAGCAGTTCCCTTCACTGC+AGG | - | chr4.1:85997474-85997493 | None:intergenic | 50.0% | |
! | AAGGTACAGGGCTAGCAACA+TGG | - | chr4.1:85997222-85997241 | None:intergenic | 50.0% |
! | GATTAGTCGTCCACCATTGG+TGG | - | chr4.1:85996074-85996093 | None:intergenic | 50.0% |
!! | AGTGTTGACTTGTCCGTGTC+AGG | - | chr4.1:85996499-85996518 | None:intergenic | 50.0% |
!! | CCAATGGTGGACGACTAATC+CGG | + | chr4.1:85996074-85996093 | MS.gene026725:intron | 50.0% |
!! | GTGTTGACTTGTCCGTGTCA+GGG | - | chr4.1:85996498-85996517 | None:intergenic | 50.0% |
AATCGAACCCGGTATTCCCC+GGG | + | chr4.1:85996144-85996163 | MS.gene026725:intron | 55.0% | |
AGAAGCAGAAGAACAGGCCC+TGG | + | chr4.1:85997797-85997816 | MS.gene026725:CDS | 55.0% | |
GAATCGAACCCGGTATTCCC+CGG | + | chr4.1:85996143-85996162 | MS.gene026725:intron | 55.0% | |
GCATGCCTTTACGCATGAGC+CGG | - | chr4.1:85996096-85996115 | None:intergenic | 55.0% | |
GTGTGTGTAACTGGAGCAGG+AGG | + | chr4.1:85995798-85995817 | MS.gene026725:CDS | 55.0% | |
TACCGGGTTCGATTCCTAGG+GGG | - | chr4.1:85996138-85996157 | None:intergenic | 55.0% | |
TCCGTGTCAGGGTCCTATGA+TGG | - | chr4.1:85996487-85996506 | None:intergenic | 55.0% | |
TTCCCCCTAGGAATCGAACC+CGG | + | chr4.1:85996133-85996152 | MS.gene026725:intron | 55.0% | |
TTCCTAGGGGGAACAACGCT+TGG | - | chr4.1:85996126-85996145 | None:intergenic | 55.0% | |
! | ACCATTGGTGGGTCGGAAAC+CGG | - | chr4.1:85996062-85996081 | None:intergenic | 55.0% |
! | ATCGTGTTGATGCCTGACCC+CGG | - | chr4.1:85998853-85998872 | None:intergenic | 55.0% |
! | ATGCGTAAAGGCATGCGCAC+CGG | + | chr4.1:85996100-85996119 | MS.gene026725:intron | 55.0% |
! | CGGTGAAGCAGGTAGTGGTA+TGG | - | chr4.1:85998128-85998147 | None:intergenic | 55.0% |
! | CTCCTTCTAAGGACGTACCC+GGG | - | chr4.1:85996164-85996183 | None:intergenic | 55.0% |
! | GCTCCTTCTAAGGACGTACC+CGG | - | chr4.1:85996165-85996184 | None:intergenic | 55.0% |
! | TCCTTCTAAGGACGTACCCG+GGG | - | chr4.1:85996163-85996182 | None:intergenic | 55.0% |
!! | CCGGATTAGTCGTCCACCAT+TGG | - | chr4.1:85996077-85996096 | None:intergenic | 55.0% |
!! | CCTCAGGTTGAAGGTGTGTC+CGG | + | chr4.1:85998831-85998850 | MS.gene026725:intron | 55.0% |
!! | CTCAGGTTGAAGGTGTGTCC+GGG | + | chr4.1:85998832-85998851 | MS.gene026725:intron | 55.0% |
!! | TCAGGTTGAAGGTGTGTCCG+GGG | + | chr4.1:85998833-85998852 | MS.gene026725:intron | 55.0% |
AGGACGTACCCGGGGAATAC+CGG | - | chr4.1:85996155-85996174 | None:intergenic | 60.0% | |
CCGGACACACCTTCAACCTG+AGG | - | chr4.1:85998834-85998853 | None:intergenic | 60.0% | |
GGTTTCCGACCCACCAATGG+TGG | + | chr4.1:85996061-85996080 | MS.gene026725:intron | 60.0% | |
TAGGGGGAACAACGCTTGGC+CGG | - | chr4.1:85996122-85996141 | None:intergenic | 60.0% | |
TCCCCGGGTACGTCCTTAGA+AGG | + | chr4.1:85996159-85996178 | MS.gene026725:intron | 60.0% | |
! | ACCGGTTTCCGACCCACCAA+TGG | + | chr4.1:85996058-85996077 | MS.gene026725:intron | 60.0% |
! | GTCGTCCACCATTGGTGGGT+CGG | - | chr4.1:85996069-85996088 | None:intergenic | 60.0% |
! | TTGAAGGTGTGTCCGGGGTC+AGG | + | chr4.1:85998838-85998857 | MS.gene026725:intron | 60.0% |
GGACGTACCCGGGGAATACC+GGG | - | chr4.1:85996154-85996173 | None:intergenic | 65.0% | |
! | GGCCAAGCGTTGTTCCCCCT+AGG | + | chr4.1:85996121-85996140 | MS.gene026725:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 85995762 | 85999167 | 85995762 | ID=MS.gene026725 |
chr4.1 | mRNA | 85995762 | 85999167 | 85995762 | ID=MS.gene026725.t1;Parent=MS.gene026725 |
chr4.1 | exon | 85995762 | 85995894 | 85995762 | ID=MS.gene026725.t1.exon1;Parent=MS.gene026725.t1 |
chr4.1 | CDS | 85995762 | 85995894 | 85995762 | ID=cds.MS.gene026725.t1;Parent=MS.gene026725.t1 |
chr4.1 | exon | 85997095 | 85997264 | 85997095 | ID=MS.gene026725.t1.exon2;Parent=MS.gene026725.t1 |
chr4.1 | CDS | 85997095 | 85997264 | 85997095 | ID=cds.MS.gene026725.t1;Parent=MS.gene026725.t1 |
chr4.1 | exon | 85997456 | 85997641 | 85997456 | ID=MS.gene026725.t1.exon3;Parent=MS.gene026725.t1 |
chr4.1 | CDS | 85997456 | 85997641 | 85997456 | ID=cds.MS.gene026725.t1;Parent=MS.gene026725.t1 |
chr4.1 | exon | 85997774 | 85997936 | 85997774 | ID=MS.gene026725.t1.exon4;Parent=MS.gene026725.t1 |
chr4.1 | CDS | 85997774 | 85997936 | 85997774 | ID=cds.MS.gene026725.t1;Parent=MS.gene026725.t1 |
chr4.1 | exon | 85998353 | 85998539 | 85998353 | ID=MS.gene026725.t1.exon5;Parent=MS.gene026725.t1 |
chr4.1 | CDS | 85998353 | 85998539 | 85998353 | ID=cds.MS.gene026725.t1;Parent=MS.gene026725.t1 |
chr4.1 | exon | 85999029 | 85999167 | 85999029 | ID=MS.gene026725.t1.exon6;Parent=MS.gene026725.t1 |
chr4.1 | CDS | 85999029 | 85999167 | 85999029 | ID=cds.MS.gene026725.t1;Parent=MS.gene026725.t1 |
Gene Sequence |
Protein sequence |