Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027118.t1 | XP_003600057.1 | 96.8 | 435 | 12 | 1 | 1 | 435 | 1 | 433 | 2.40E-257 | 897.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027118.t1 | Q9LJU7 | 73.3 | 431 | 115 | 0 | 5 | 435 | 7 | 437 | 7.0e-205 | 714.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027118.t1 | G7IXK7 | 96.8 | 435 | 12 | 1 | 1 | 435 | 1 | 433 | 1.8e-257 | 897.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene24675 | MS.gene027118 | PPI |
| MS.gene24727 | MS.gene027118 | PPI |
| MS.gene007238 | MS.gene027118 | PPI |
| MS.gene050332 | MS.gene027118 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027118.t1 | MTR_3g051240 | 96.782 | 435 | 12 | 1 | 1 | 435 | 1 | 433 | 0.0 | 870 |
| MS.gene027118.t1 | MTR_5g092360 | 79.858 | 422 | 83 | 1 | 16 | 435 | 18 | 439 | 0.0 | 726 |
| MS.gene027118.t1 | MTR_1g060360 | 59.905 | 419 | 166 | 2 | 1 | 418 | 3 | 420 | 0.0 | 531 |
| MS.gene027118.t1 | MTR_7g104330 | 57.944 | 428 | 177 | 3 | 5 | 430 | 15 | 441 | 0.0 | 526 |
| MS.gene027118.t1 | MTR_7g104360 | 59.330 | 418 | 164 | 5 | 9 | 422 | 12 | 427 | 3.07e-177 | 502 |
| MS.gene027118.t1 | MTR_0188s0020 | 43.387 | 431 | 209 | 13 | 15 | 412 | 26 | 454 | 1.49e-102 | 313 |
| MS.gene027118.t1 | MTR_4g115670 | 40.783 | 434 | 225 | 9 | 27 | 434 | 40 | 467 | 1.81e-100 | 308 |
| MS.gene027118.t1 | MTR_6g013050 | 38.398 | 487 | 201 | 11 | 18 | 413 | 49 | 527 | 3.99e-99 | 308 |
| MS.gene027118.t1 | MTR_4g037105 | 42.892 | 415 | 203 | 11 | 31 | 412 | 35 | 448 | 2.73e-97 | 300 |
| MS.gene027118.t1 | MTR_7g056403 | 38.365 | 477 | 192 | 9 | 45 | 422 | 70 | 543 | 5.33e-96 | 299 |
| MS.gene027118.t1 | MTR_3g083810 | 39.610 | 462 | 178 | 11 | 45 | 412 | 71 | 525 | 1.66e-95 | 297 |
| MS.gene027118.t1 | MTR_3g083820 | 39.387 | 457 | 188 | 10 | 45 | 413 | 71 | 526 | 1.30e-93 | 292 |
| MS.gene027118.t1 | MTR_1g112630 | 40.783 | 434 | 221 | 12 | 13 | 412 | 19 | 450 | 1.25e-92 | 288 |
| MS.gene027118.t1 | MTR_6g013050 | 37.691 | 459 | 189 | 10 | 18 | 387 | 49 | 499 | 3.41e-89 | 281 |
| MS.gene027118.t1 | MTR_1g052505 | 31.471 | 340 | 173 | 13 | 58 | 349 | 209 | 536 | 8.94e-35 | 136 |
| MS.gene027118.t1 | MTR_4g037670 | 29.640 | 361 | 195 | 11 | 36 | 349 | 207 | 555 | 1.77e-34 | 136 |
| MS.gene027118.t1 | MTR_4g082930 | 25.902 | 471 | 264 | 15 | 45 | 434 | 144 | 610 | 7.90e-26 | 110 |
| MS.gene027118.t1 | MTR_5g092450 | 61.250 | 80 | 11 | 1 | 308 | 387 | 8 | 67 | 4.96e-25 | 98.6 |
| MS.gene027118.t1 | MTR_3g074930 | 24.670 | 454 | 265 | 15 | 38 | 420 | 176 | 623 | 1.72e-24 | 106 |
| MS.gene027118.t1 | MTR_5g092300 | 74.138 | 58 | 15 | 0 | 364 | 421 | 9 | 66 | 3.13e-24 | 95.9 |
| MS.gene027118.t1 | MTR_3g074930 | 25.056 | 447 | 261 | 15 | 40 | 420 | 178 | 616 | 3.77e-24 | 105 |
| MS.gene027118.t1 | MTR_4g082940 | 26.699 | 412 | 228 | 17 | 39 | 384 | 138 | 541 | 6.08e-23 | 102 |
| MS.gene027118.t1 | MTR_3g074970 | 24.658 | 438 | 231 | 15 | 40 | 421 | 127 | 521 | 1.14e-22 | 100 |
| MS.gene027118.t1 | MTR_4g103520 | 25.143 | 350 | 207 | 10 | 101 | 401 | 253 | 596 | 2.88e-22 | 99.8 |
| MS.gene027118.t1 | MTR_4g103520 | 25.143 | 350 | 207 | 10 | 101 | 401 | 176 | 519 | 4.14e-22 | 99.4 |
| MS.gene027118.t1 | MTR_5g045600 | 25.278 | 360 | 212 | 11 | 101 | 410 | 245 | 597 | 4.87e-22 | 99.4 |
| MS.gene027118.t1 | MTR_8g063080 | 25.978 | 358 | 212 | 12 | 101 | 410 | 238 | 590 | 2.24e-21 | 97.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027118.t1 | AT3G20500 | 73.318 | 431 | 115 | 0 | 5 | 435 | 7 | 437 | 0.0 | 692 |
| MS.gene027118.t1 | AT3G52820 | 60.500 | 400 | 156 | 2 | 17 | 415 | 20 | 418 | 0.0 | 516 |
| MS.gene027118.t1 | AT3G52780 | 58.156 | 423 | 168 | 7 | 6 | 420 | 4 | 425 | 3.41e-175 | 497 |
| MS.gene027118.t1 | AT3G52810 | 57.075 | 424 | 177 | 4 | 5 | 424 | 10 | 432 | 8.84e-174 | 494 |
| MS.gene027118.t1 | AT3G52780 | 56.886 | 334 | 136 | 6 | 6 | 332 | 4 | 336 | 1.20e-131 | 384 |
| MS.gene027118.t1 | AT5G34850 | 42.347 | 392 | 199 | 7 | 45 | 410 | 54 | 444 | 9.80e-99 | 303 |
| MS.gene027118.t1 | AT4G36350 | 40.135 | 446 | 230 | 13 | 2 | 412 | 5 | 448 | 1.83e-97 | 300 |
| MS.gene027118.t1 | AT1G56360 | 40.268 | 447 | 228 | 13 | 4 | 412 | 3 | 448 | 2.25e-96 | 297 |
| MS.gene027118.t1 | AT3G07130 | 40.275 | 437 | 176 | 6 | 60 | 412 | 80 | 515 | 1.01e-95 | 298 |
| MS.gene027118.t1 | AT2G27190 | 38.462 | 468 | 242 | 13 | 1 | 429 | 7 | 467 | 3.95e-92 | 286 |
| MS.gene027118.t1 | AT3G07130 | 37.367 | 471 | 177 | 7 | 60 | 413 | 80 | 549 | 7.00e-89 | 281 |
| MS.gene027118.t1 | AT2G16430 | 39.503 | 443 | 233 | 12 | 3 | 412 | 12 | 452 | 2.21e-88 | 276 |
| MS.gene027118.t1 | AT2G18130 | 40.051 | 392 | 195 | 9 | 45 | 412 | 54 | 429 | 6.94e-87 | 272 |
| MS.gene027118.t1 | AT4G13700 | 42.021 | 376 | 163 | 7 | 44 | 366 | 64 | 437 | 2.71e-86 | 271 |
| MS.gene027118.t1 | AT2G16430 | 42.331 | 326 | 164 | 7 | 111 | 412 | 7 | 332 | 1.86e-75 | 239 |
| MS.gene027118.t1 | AT2G32770 | 36.735 | 392 | 174 | 5 | 95 | 412 | 143 | 534 | 4.03e-71 | 234 |
| MS.gene027118.t1 | AT4G13700 | 39.528 | 339 | 150 | 7 | 44 | 329 | 64 | 400 | 1.40e-67 | 221 |
| MS.gene027118.t1 | AT3G46120 | 33.484 | 442 | 191 | 15 | 3 | 412 | 6 | 376 | 2.16e-63 | 209 |
| MS.gene027118.t1 | AT2G32770 | 35.792 | 366 | 161 | 5 | 95 | 386 | 62 | 427 | 6.57e-63 | 209 |
| MS.gene027118.t1 | AT2G32770 | 32.143 | 392 | 163 | 6 | 95 | 412 | 143 | 505 | 2.67e-54 | 189 |
| MS.gene027118.t1 | AT1G52940 | 36.842 | 228 | 126 | 8 | 45 | 255 | 15 | 241 | 1.63e-35 | 132 |
| MS.gene027118.t1 | AT1G13900 | 25.311 | 482 | 275 | 17 | 23 | 425 | 117 | 592 | 9.60e-24 | 104 |
| MS.gene027118.t1 | AT2G03450 | 26.106 | 452 | 249 | 16 | 45 | 419 | 143 | 586 | 1.20e-23 | 104 |
| MS.gene027118.t1 | AT1G13750 | 26.361 | 349 | 204 | 10 | 101 | 401 | 239 | 582 | 6.11e-22 | 99.0 |
| MS.gene027118.t1 | AT5G50400 | 25.714 | 350 | 205 | 13 | 101 | 401 | 165 | 508 | 2.82e-21 | 96.7 |
| MS.gene027118.t1 | AT5G50400 | 25.714 | 350 | 205 | 13 | 101 | 401 | 237 | 580 | 3.08e-21 | 96.7 |
| MS.gene027118.t1 | AT4G24890 | 26.608 | 342 | 192 | 13 | 101 | 392 | 241 | 573 | 3.73e-20 | 93.6 |
Find 105 sgRNAs with CRISPR-Local
Find 195 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAGCATATACCTTTGTTAA+AGG | 0.247102 | 3.4:-48424953 | MS.gene027118:CDS |
| CTCCATCACCGATTGTTATA+TGG | 0.253892 | 3.4:+48423294 | None:intergenic |
| CCAACCACAGCAAAACTAAT+TGG | 0.273774 | 3.4:+48425168 | None:intergenic |
| AAGATACACCATACGGTAAT+AGG | 0.308885 | 3.4:-48425276 | MS.gene027118:CDS |
| ACGTGTATATAATGGAAAAT+TGG | 0.322130 | 3.4:-48423333 | MS.gene027118:CDS |
| TGTACTCAGAACAATATAAA+TGG | 0.324001 | 3.4:-48424798 | MS.gene027118:CDS |
| TAGTTCACCATGACCGAAAC+TGG | 0.329242 | 3.4:+48423054 | None:intergenic |
| TTTGCTGTGGTTGGAGATCT+TGG | 0.334048 | 3.4:-48425159 | MS.gene027118:CDS |
| CTGTAAAATCTGATGATATA+TGG | 0.338306 | 3.4:-48422973 | MS.gene027118:CDS |
| TAAACGCAACACATGCCTTC+TGG | 0.340991 | 3.4:-48423024 | MS.gene027118:CDS |
| ACGAAAGGTCGCCAGGTATC+AGG | 0.345446 | 3.4:+48425076 | None:intergenic |
| TGACAGAAACGTGTATATAA+TGG | 0.346137 | 3.4:-48423341 | MS.gene027118:intron |
| CAGGCTCATCATCGTCATTC+CGG | 0.364722 | 3.4:+48422993 | None:intergenic |
| CGGTAAAAGTAAACAGAATT+CGG | 0.386730 | 3.4:+48425243 | None:intergenic |
| TTGATTTGGTCCAACCAGTT+TGG | 0.392374 | 3.4:+48425136 | None:intergenic |
| TAAACAGAATTCGGCTCTAA+AGG | 0.397659 | 3.4:+48425252 | None:intergenic |
| TGTTGAATACGGAACATTGC+CGG | 0.397938 | 3.4:-48425364 | MS.gene027118:CDS |
| ACCACCTTCTTATCCTCAAC+AGG | 0.401932 | 3.4:-48425996 | MS.gene027118:intron |
| GATGTGATCCAACGTTGATT+TGG | 0.429045 | 3.4:+48425122 | None:intergenic |
| CCAACGATGCTGGATATAAT+CGG | 0.434342 | 3.4:+48425050 | None:intergenic |
| TCGGCATACGAAAGGTCGCC+AGG | 0.436240 | 3.4:+48425069 | None:intergenic |
| AGAATCCCATGGAAGATGTA+AGG | 0.437809 | 3.4:+48426021 | None:intergenic |
| GAATTCCGTGAAGCCAGTTT+CGG | 0.439094 | 3.4:-48423067 | MS.gene027118:CDS |
| CAGGTACACATTTCATTGGC+AGG | 0.442548 | 3.4:-48425441 | MS.gene027118:CDS |
| GTAGAAAATGTAACTGTAAG+AGG | 0.446204 | 3.4:+48425308 | None:intergenic |
| CATGACCGAAACTGGCTTCA+CGG | 0.449213 | 3.4:+48423062 | None:intergenic |
| TGATCCTGTCAGTAACTTCA+AGG | 0.449221 | 3.4:-48426084 | MS.gene027118:CDS |
| CATATACCTTTGTTAAAGGA+TGG | 0.451005 | 3.4:-48424949 | MS.gene027118:CDS |
| TGTCAAAGGTGGACAGGAAA+AGG | 0.453174 | 3.4:-48423611 | MS.gene027118:CDS |
| AAACAGAATTCGGCTCTAAA+GGG | 0.453881 | 3.4:+48425253 | None:intergenic |
| CGATTATATCCAGCATCGTT+GGG | 0.460387 | 3.4:-48425049 | MS.gene027118:CDS |
| GTTGAATACGGAACATTGCC+GGG | 0.460736 | 3.4:-48425363 | MS.gene027118:CDS |
| GCACCTTCAGTTGTTGAATA+CGG | 0.463880 | 3.4:-48425375 | MS.gene027118:CDS |
| ATTCCAGGTACACATTTCAT+TGG | 0.465152 | 3.4:-48425445 | MS.gene027118:intron |
| CAGCATCGTTGGGACACGTT+TGG | 0.466619 | 3.4:-48425039 | MS.gene027118:CDS |
| CTTGATCCACTTTCCTCAAA+CGG | 0.477193 | 3.4:+48424895 | None:intergenic |
| CCGATTATATCCAGCATCGT+TGG | 0.478986 | 3.4:-48425050 | MS.gene027118:CDS |
| CAAACGTGTCCCAACGATGC+TGG | 0.483079 | 3.4:+48425040 | None:intergenic |
| GTTGGAGATCTTGGCCAAAC+TGG | 0.484735 | 3.4:-48425150 | MS.gene027118:CDS |
| TTGTCATATTTCATGTCCCA+TGG | 0.496286 | 3.4:-48423575 | MS.gene027118:CDS |
| TTAACCTGTTGAGGATAAGA+AGG | 0.497947 | 3.4:+48425992 | None:intergenic |
| AGATTTGTCATCGGTGATCC+AGG | 0.500331 | 3.4:+48425398 | None:intergenic |
| AATTCTGACCACTTCGGCTG+TGG | 0.500874 | 3.4:+48423085 | None:intergenic |
| CGTGAAGCCAGTTTCGGTCA+TGG | 0.504454 | 3.4:-48423061 | MS.gene027118:CDS |
| AGGGGTTGTTTAACCTGTTG+AGG | 0.506972 | 3.4:+48425983 | None:intergenic |
| CAGATCTGTCAAAGGTGGAC+AGG | 0.507152 | 3.4:-48423617 | MS.gene027118:CDS |
| GAGATGGAAAATGCCGTTTG+AGG | 0.510639 | 3.4:-48424908 | MS.gene027118:CDS |
| GGTGCACACATTATCATGCT+TGG | 0.518283 | 3.4:-48424841 | MS.gene027118:CDS |
| AAACTAATTGGAAATTGAGC+TGG | 0.525111 | 3.4:+48425180 | None:intergenic |
| AAATATGACAATGTAGTTGA+AGG | 0.525357 | 3.4:-48425339 | MS.gene027118:CDS |
| CAACACATGCCTTCTGGAGT+TGG | 0.529939 | 3.4:-48423018 | MS.gene027118:CDS |
| TTCCCTTGTGTTACCATCCA+CGG | 0.533715 | 3.4:+48424985 | None:intergenic |
| ACATCCTGAGTTAACTAAAG+AGG | 0.534798 | 3.4:+48422946 | None:intergenic |
| AGCATAAAGCAATGGCTCCA+TGG | 0.538411 | 3.4:+48423503 | None:intergenic |
| ATAACCTCTTTAGTTAACTC+AGG | 0.542238 | 3.4:-48422950 | MS.gene027118:CDS |
| GAGATCTTGGCCAAACTGGT+TGG | 0.544150 | 3.4:-48425146 | MS.gene027118:CDS |
| AGAACAATATAAATGGCTAA+AGG | 0.548688 | 3.4:-48424791 | MS.gene027118:intron |
| GGATATAATCGGCATACGAA+AGG | 0.549941 | 3.4:+48425061 | None:intergenic |
| GGTTAACATCGTACTTGCAT+TGG | 0.553790 | 3.4:+48425097 | None:intergenic |
| ACTACATTGTCATATTTCCC+CGG | 0.554955 | 3.4:+48425345 | None:intergenic |
| ATGCCTTCTGGAGTTGGCAC+CGG | 0.559442 | 3.4:-48423012 | MS.gene027118:CDS |
| CATATAACAATCGGTGATGG+AGG | 0.560182 | 3.4:-48423293 | MS.gene027118:CDS |
| ATAAATCCATCCTTTAACAA+AGG | 0.566465 | 3.4:+48424943 | None:intergenic |
| GTCCATATAACAATCGGTGA+TGG | 0.569269 | 3.4:-48423296 | MS.gene027118:CDS |
| TTATATCCTATAATTCGAGA+TGG | 0.571425 | 3.4:-48424924 | MS.gene027118:CDS |
| GGTGATGGAGGGAACAAAGA+AGG | 0.574485 | 3.4:-48423281 | MS.gene027118:CDS |
| TGCTAGTTCTAGACCGTGGA+TGG | 0.575174 | 3.4:-48424998 | MS.gene027118:CDS |
| CTGTGTTACTATTATACCAT+GGG | 0.577355 | 3.4:+48423559 | None:intergenic |
| CTAAAGGGCCTATTACCGTA+TGG | 0.583259 | 3.4:+48425268 | None:intergenic |
| AAAATGCCGTTTGAGGAAAG+TGG | 0.584130 | 3.4:-48424901 | MS.gene027118:CDS |
| AATAGTAACACAGCTCATCA+AGG | 0.589055 | 3.4:-48423549 | MS.gene027118:CDS |
| ACCTGTTGAGGATAAGAAGG+TGG | 0.593803 | 3.4:+48425995 | None:intergenic |
| TTGACCTTGAAGTTACTGAC+AGG | 0.594961 | 3.4:+48426080 | None:intergenic |
| TACGATGTTAACCTGATACC+TGG | 0.602924 | 3.4:-48425087 | MS.gene027118:CDS |
| ATTCCGGTGCCAACTCCAGA+AGG | 0.606814 | 3.4:+48423009 | None:intergenic |
| ATATAGATCCACAGCCGAAG+TGG | 0.607631 | 3.4:-48423093 | MS.gene027118:CDS |
| TGTCCACGCATATGAACGCT+CGG | 0.615743 | 3.4:-48423451 | MS.gene027118:intron |
| ATCGTTGGGACACGTTTGGT+AGG | 0.618657 | 3.4:-48425035 | MS.gene027118:CDS |
| GAAGGTGGTTTAGAATCCCA+TGG | 0.619221 | 3.4:+48426010 | None:intergenic |
| AACACAGCTCATCAAGGTGA+AGG | 0.620113 | 3.4:-48423543 | MS.gene027118:CDS |
| TGAAATATGACAAGCAACCA+AGG | 0.623138 | 3.4:+48423585 | None:intergenic |
| ACAAGCATATGAGAGTTACC+TGG | 0.624277 | 3.4:-48425416 | MS.gene027118:CDS |
| ACGCTAGCAGCATAAAGCAA+TGG | 0.624653 | 3.4:+48423495 | None:intergenic |
| TGAAGGTGCAGATTTGTCAT+CGG | 0.625697 | 3.4:+48425389 | None:intergenic |
| TGGACAGGAAAAGGACACCT+TGG | 0.626466 | 3.4:-48423602 | MS.gene027118:CDS |
| GCTGTGTTACTATTATACCA+TGG | 0.628930 | 3.4:+48423558 | None:intergenic |
| CTCAGGAAAGATACACCATA+CGG | 0.635954 | 3.4:-48425283 | MS.gene027118:CDS |
| TCACGGAATTCTGACCACTT+CGG | 0.636085 | 3.4:+48423079 | None:intergenic |
| ACAGCTCATCAAGGTGAAGG+TGG | 0.636860 | 3.4:-48423540 | MS.gene027118:CDS |
| GGTGCTGTCCATATAACAAT+CGG | 0.638026 | 3.4:-48423302 | MS.gene027118:CDS |
| ATATAACAATCGGTGATGGA+GGG | 0.639292 | 3.4:-48423292 | MS.gene027118:CDS |
| GTTCCGTATTCAACAACTGA+AGG | 0.644804 | 3.4:+48425372 | None:intergenic |
| TTGAATACGGAACATTGCCG+GGG | 0.658166 | 3.4:-48425362 | MS.gene027118:CDS |
| CACGGTCTAGAACTAGCAAG+TGG | 0.659412 | 3.4:+48425003 | None:intergenic |
| ACAGACAGATCTGTCAAAGG+TGG | 0.665722 | 3.4:-48423622 | MS.gene027118:intron |
| CAGGACCTTGTCCACCACAT+CGG | 0.669040 | 3.4:+48425223 | None:intergenic |
| TGAACAGACAGATCTGTCAA+AGG | 0.671985 | 3.4:-48423625 | MS.gene027118:intron |
| AGACCGTGGATGGTAACACA+AGG | 0.673459 | 3.4:-48424988 | MS.gene027118:CDS |
| ATACCGAGCGTTCATATGCG+TGG | 0.676010 | 3.4:+48423448 | None:intergenic |
| TGGTTGGACCAAATCAACGT+TGG | 0.679711 | 3.4:-48425130 | MS.gene027118:CDS |
| GTTATATGGACAGCACCACA+AGG | 0.701668 | 3.4:+48423308 | None:intergenic |
| AATGGAAAATTGGATCCTTG+TGG | 0.706470 | 3.4:-48423323 | MS.gene027118:CDS |
| CACTTGCTAGTTCTAGACCG+TGG | 0.714837 | 3.4:-48425002 | MS.gene027118:CDS |
| GACCGTGGATGGTAACACAA+GGG | 0.717094 | 3.4:-48424987 | MS.gene027118:CDS |
| TGGTGATATGATGAAAACCA+TGG | 0.721681 | 3.4:-48423520 | MS.gene027118:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATGTATGTATAAAGATAA+AGG | - | chr3.4:48425038-48425057 | MS.gene027118:CDS | 15.0% |
| !! | GAATATAGAAATTGAAAATT+AGG | + | chr3.4:48425245-48425264 | None:intergenic | 15.0% |
| !! | TATGTATGTATAAAGATAAA+GGG | - | chr3.4:48425039-48425058 | MS.gene027118:CDS | 15.0% |
| !! | ATAAAGTAACATCCTTATAA+AGG | + | chr3.4:48423508-48423527 | None:intergenic | 20.0% |
| !! | ATAATATAAAGAAAACTCCA+AGG | + | chr3.4:48425326-48425345 | None:intergenic | 20.0% |
| !! | GATTAAGTAATAAAGCAAAA+GGG | + | chr3.4:48423102-48423121 | None:intergenic | 20.0% |
| !! | TGAAAACTTCAAAAAACATT+TGG | + | chr3.4:48425785-48425804 | None:intergenic | 20.0% |
| !! | TGATTAAGTAATAAAGCAAA+AGG | + | chr3.4:48423103-48423122 | None:intergenic | 20.0% |
| !!! | ATTATTTTCTGCACAAATTT+AGG | + | chr3.4:48425283-48425302 | None:intergenic | 20.0% |
| !!! | TAATTTTGCAGAAAAATATG+AGG | + | chr3.4:48423066-48423085 | None:intergenic | 20.0% |
| !!! | TTGGAGTTTTCTTTATATTA+TGG | - | chr3.4:48425325-48425344 | MS.gene027118:CDS | 20.0% |
| ! | AAATATGACAATGTAGTTGA+AGG | - | chr3.4:48423674-48423693 | MS.gene027118:intron | 25.0% |
| ! | AAATATGAGGTCATAAATGA+AGG | + | chr3.4:48423053-48423072 | None:intergenic | 25.0% |
| ! | AAATGTATAACTAAGCATAG+TGG | + | chr3.4:48425017-48425036 | None:intergenic | 25.0% |
| ! | AAGTGAAAAAAGATATGAAG+TGG | - | chr3.4:48424454-48424473 | MS.gene027118:intron | 25.0% |
| ! | AATATGAGGTCATAAATGAA+GGG | + | chr3.4:48423052-48423071 | None:intergenic | 25.0% |
| ! | AATTTGTGCAGAAAATAATC+CGG | - | chr3.4:48425284-48425303 | MS.gene027118:CDS | 25.0% |
| ! | AGAACAATATAAATGGCTAA+AGG | - | chr3.4:48424222-48424241 | MS.gene027118:intron | 25.0% |
| ! | ATAAAGATATGACTAGAATC+AGG | - | chr3.4:48424940-48424959 | MS.gene027118:CDS | 25.0% |
| ! | ATAAATCCATCCTTTAACAA+AGG | + | chr3.4:48424073-48424092 | None:intergenic | 25.0% |
| ! | CATTACCTTGTAAATTTACT+TGG | - | chr3.4:48425613-48425632 | MS.gene027118:intron | 25.0% |
| ! | CTGTAAAATCTGATGATATA+TGG | - | chr3.4:48426040-48426059 | MS.gene027118:CDS | 25.0% |
| ! | GAACAGAAATATTAGAAAAC+AGG | + | chr3.4:48424485-48424504 | None:intergenic | 25.0% |
| ! | TAGTCATATCTTTATGATGA+AGG | + | chr3.4:48424935-48424954 | None:intergenic | 25.0% |
| ! | TATCATTCTTACCATTTGTA+TGG | - | chr3.4:48425873-48425892 | MS.gene027118:intron | 25.0% |
| ! | TGTACTCAGAACAATATAAA+TGG | - | chr3.4:48424215-48424234 | MS.gene027118:intron | 25.0% |
| ! | TTATATCCTATAATTCGAGA+TGG | - | chr3.4:48424089-48424108 | MS.gene027118:intron | 25.0% |
| !! | ACGTGTATATAATGGAAAAT+TGG | - | chr3.4:48425680-48425699 | MS.gene027118:intron | 25.0% |
| !! | CATATATCATCAGATTTTAC+AGG | + | chr3.4:48426042-48426061 | None:intergenic | 25.0% |
| !! | TTTTCAATGAGAATATGTCA+TGG | - | chr3.4:48424362-48424381 | MS.gene027118:intron | 25.0% |
| !! | TTTTCATATGCTCATTGAAT+TGG | + | chr3.4:48423350-48423369 | None:intergenic | 25.0% |
| !!! | AAAATCTCTGAAGTTATTGT+AGG | - | chr3.4:48425068-48425087 | MS.gene027118:CDS | 25.0% |
| !!! | AATAGCTTATAGCTTGTTTT+TGG | - | chr3.4:48423368-48423387 | MS.gene027118:intron | 25.0% |
| !!! | CATGTCAAAAAGTTATTTCT+AGG | - | chr3.4:48423255-48423274 | MS.gene027118:intron | 25.0% |
| !!! | CTATTTTTGTCATGTGTTTT+TGG | - | chr3.4:48423153-48423172 | MS.gene027118:intron | 25.0% |
| !!! | GATTTTGAAATGAATGTATG+TGG | + | chr3.4:48424687-48424706 | None:intergenic | 25.0% |
| !!! | TATTATTCTTTTGAAGTTGC+TGG | - | chr3.4:48424151-48424170 | MS.gene027118:intron | 25.0% |
| !!! | TTTTTTCACTTCTTGTTGTA+AGG | + | chr3.4:48424445-48424464 | None:intergenic | 25.0% |
| AAAAACCTTACATCTTCCAT+GGG | - | chr3.4:48422987-48423006 | MS.gene027118:CDS | 30.0% | |
| AAACTAATTGGAAATTGAGC+TGG | + | chr3.4:48423836-48423855 | None:intergenic | 30.0% | |
| AGAGCATATACCTTTGTTAA+AGG | - | chr3.4:48424060-48424079 | MS.gene027118:intron | 30.0% | |
| ATAAATGGCTAAAGGTTAGT+TGG | - | chr3.4:48424230-48424249 | MS.gene027118:intron | 30.0% | |
| ATAACCTCTTTAGTTAACTC+AGG | - | chr3.4:48426063-48426082 | MS.gene027118:CDS | 30.0% | |
| ATATGAGGTCATAAATGAAG+GGG | + | chr3.4:48423051-48423070 | None:intergenic | 30.0% | |
| ATCTTCAACGACACTTAAAA+AGG | + | chr3.4:48425846-48425865 | None:intergenic | 30.0% | |
| CATAGGTTTCAATGTAAGTA+AGG | + | chr3.4:48424722-48424741 | None:intergenic | 30.0% | |
| CATATACCTTTGTTAAAGGA+TGG | - | chr3.4:48424064-48424083 | MS.gene027118:intron | 30.0% | |
| CGGTAAAAGTAAACAGAATT+CGG | + | chr3.4:48423773-48423792 | None:intergenic | 30.0% | |
| GATCACCAAGTAAATTTACA+AGG | + | chr3.4:48425621-48425640 | None:intergenic | 30.0% | |
| GTAGAAAATGTAACTGTAAG+AGG | + | chr3.4:48423708-48423727 | None:intergenic | 30.0% | |
| GTTGAACATGTTTCATTCAT+AGG | + | chr3.4:48424739-48424758 | None:intergenic | 30.0% | |
| TAGATCTAATTCCATTTGTC+TGG | + | chr3.4:48424285-48424304 | None:intergenic | 30.0% | |
| TCAAACAAGGAACCTTTATA+AGG | - | chr3.4:48423493-48423512 | MS.gene027118:CDS | 30.0% | |
| TGAAGCTGTTTATTCAAACA+AGG | - | chr3.4:48423480-48423499 | MS.gene027118:CDS | 30.0% | |
| TGACAGAAACGTGTATATAA+TGG | - | chr3.4:48425672-48425691 | MS.gene027118:intron | 30.0% | |
| ! | AGAGAAGCAATAGTGTTATT+TGG | + | chr3.4:48424779-48424798 | None:intergenic | 30.0% |
| ! | CATTTTCCATCTCGAATTAT+AGG | + | chr3.4:48424098-48424117 | None:intergenic | 30.0% |
| ! | CTGTGTTACTATTATACCAT+GGG | + | chr3.4:48425457-48425476 | None:intergenic | 30.0% |
| ! | TAAAGCAAAAGGGTATACAA+AGG | + | chr3.4:48423092-48423111 | None:intergenic | 30.0% |
| !! | TTTTCTAGTCTTCGCAATAT+CGG | - | chr3.4:48424626-48424645 | MS.gene027118:intron | 30.0% |
| !!! | ATTTCCAATTAGTTTTGCTG+TGG | - | chr3.4:48423841-48423860 | MS.gene027118:intron | 30.0% |
| !!! | TTTGTCATGTGTTTTTGGTT+TGG | - | chr3.4:48423158-48423177 | MS.gene027118:intron | 30.0% |
| AAAAGGAACAGAGGTAGTAT+CGG | + | chr3.4:48425829-48425848 | None:intergenic | 35.0% | |
| AAGATACACCATACGGTAAT+AGG | - | chr3.4:48423737-48423756 | MS.gene027118:intron | 35.0% | |
| AATAGTAACACAGCTCATCA+AGG | - | chr3.4:48425464-48425483 | MS.gene027118:intron | 35.0% | |
| AATGGAAAATTGGATCCTTG+TGG | - | chr3.4:48425690-48425709 | MS.gene027118:intron | 35.0% | |
| ACATCCTGAGTTAACTAAAG+AGG | + | chr3.4:48426070-48426089 | None:intergenic | 35.0% | |
| ACTACATTGTCATATTTCCC+CGG | + | chr3.4:48423671-48423690 | None:intergenic | 35.0% | |
| ATCCCAAAGTTGAGTAGAAA+CGG | + | chr3.4:48424586-48424605 | None:intergenic | 35.0% | |
| ATGATGAAGTGTGAAATCCT+TGG | - | chr3.4:48424846-48424865 | MS.gene027118:CDS | 35.0% | |
| ATTCCAGGTACACATTTCAT+TGG | - | chr3.4:48423568-48423587 | MS.gene027118:CDS | 35.0% | |
| CAAAATTTAGTGAAGCTGCT+AGG | - | chr3.4:48423280-48423299 | MS.gene027118:CDS | 35.0% | |
| GAAAAACCTTACATCTTCCA+TGG | - | chr3.4:48422986-48423005 | MS.gene027118:CDS | 35.0% | |
| GACTGTAATACCCTTATCAA+GGG | + | chr3.4:48424805-48424824 | None:intergenic | 35.0% | |
| GTATGCATTGCATTTGCATA+AGG | - | chr3.4:48424877-48424896 | MS.gene027118:CDS | 35.0% | |
| GTCATTACATTCCAGACAAA+TGG | - | chr3.4:48424271-48424290 | MS.gene027118:intron | 35.0% | |
| TACGGTTACTAGCAAAAAGA+CGG | - | chr3.4:48425108-48425127 | MS.gene027118:CDS | 35.0% | |
| TGAAATATGACAAGCAACCA+AGG | + | chr3.4:48425431-48425450 | None:intergenic | 35.0% | |
| TGACTGTAATACCCTTATCA+AGG | + | chr3.4:48424806-48424825 | None:intergenic | 35.0% | |
| TGGTGATATGATGAAAACCA+TGG | - | chr3.4:48425493-48425512 | MS.gene027118:intron | 35.0% | |
| TGTATAACTAAGCATAGTGG+AGG | + | chr3.4:48425014-48425033 | None:intergenic | 35.0% | |
| TTAACCTGTTGAGGATAAGA+AGG | + | chr3.4:48423024-48423043 | None:intergenic | 35.0% | |
| TTGTCATATTTCATGTCCCA+TGG | - | chr3.4:48425438-48425457 | MS.gene027118:CDS | 35.0% | |
| TTGTTAATTTCGCAGTTAGC+AGG | + | chr3.4:48424656-48424675 | None:intergenic | 35.0% | |
| ! | AGATGTAAGGTTTTTCTAGG+AGG | + | chr3.4:48422982-48423001 | None:intergenic | 35.0% |
| ! | AGTTACATTTTCTACAGCTC+AGG | - | chr3.4:48423713-48423732 | MS.gene027118:intron | 35.0% |
| ! | CATTGAATTGGTTCTTCATC+TGG | + | chr3.4:48423338-48423357 | None:intergenic | 35.0% |
| ! | GCTGTGTTACTATTATACCA+TGG | + | chr3.4:48425458-48425477 | None:intergenic | 35.0% |
| ! | GGAAGATGTAAGGTTTTTCT+AGG | + | chr3.4:48422985-48423004 | None:intergenic | 35.0% |
| ! | TAAACAGAATTCGGCTCTAA+AGG | + | chr3.4:48423764-48423783 | None:intergenic | 35.0% |
| ! | TAGTATCGGAGAAAACTCAA+AGG | + | chr3.4:48425815-48425834 | None:intergenic | 35.0% |
| !! | AAACAGAATTCGGCTCTAAA+GGG | + | chr3.4:48423763-48423782 | None:intergenic | 35.0% |
| !! | ATATAACAATCGGTGATGGA+GGG | - | chr3.4:48425721-48425740 | MS.gene027118:intron | 35.0% |
| !! | TCTGTTTACTTTTACCGATG+TGG | - | chr3.4:48423776-48423795 | MS.gene027118:intron | 35.0% |
| !! | TGCTAGGTTGATTTGAGAAA+TGG | - | chr3.4:48423296-48423315 | MS.gene027118:CDS | 35.0% |
| AATGCATACATCTGTCACCA+AGG | + | chr3.4:48424866-48424885 | None:intergenic | 40.0% | |
| ACAAGCATATGAGAGTTACC+TGG | - | chr3.4:48423597-48423616 | MS.gene027118:CDS | 40.0% | |
| ACGGTTACTAGCAAAAAGAC+GGG | - | chr3.4:48425109-48425128 | MS.gene027118:CDS | 40.0% | |
| AGAATCCCATGGAAGATGTA+AGG | + | chr3.4:48422995-48423014 | None:intergenic | 40.0% | |
| ATGGTTGCGTCATTGATGTT+TGG | - | chr3.4:48425892-48425911 | MS.gene027118:intron | 40.0% | |
| CAATGACGCAACCATACAAA+TGG | + | chr3.4:48425887-48425906 | None:intergenic | 40.0% | |
| CCAACCACAGCAAAACTAAT+TGG | + | chr3.4:48423848-48423867 | None:intergenic | 40.0% | |
| CCAACGATGCTGGATATAAT+CGG | + | chr3.4:48423966-48423985 | None:intergenic | 40.0% | |
| CGACACTTAAAAAGGAACAG+AGG | + | chr3.4:48425838-48425857 | None:intergenic | 40.0% | |
| CGATTATATCCAGCATCGTT+GGG | - | chr3.4:48423964-48423983 | MS.gene027118:intron | 40.0% | |
| CTCAGGAAAGATACACCATA+CGG | - | chr3.4:48423730-48423749 | MS.gene027118:intron | 40.0% | |
| CTTCTCTCTTCCCTTGATAA+GGG | - | chr3.4:48424792-48424811 | MS.gene027118:CDS | 40.0% | |
| CTTGATCCACTTTCCTCAAA+CGG | + | chr3.4:48424121-48424140 | None:intergenic | 40.0% | |
| GAAAATAATCCGGCCACAAT+TGG | - | chr3.4:48425294-48425313 | MS.gene027118:CDS | 40.0% | |
| GACCGTTTCTACTCAACTTT+GGG | - | chr3.4:48424581-48424600 | MS.gene027118:intron | 40.0% | |
| GCACCTTCAGTTGTTGAATA+CGG | - | chr3.4:48423638-48423657 | MS.gene027118:intron | 40.0% | |
| GGATATAATCGGCATACGAA+AGG | + | chr3.4:48423955-48423974 | None:intergenic | 40.0% | |
| GGTTAACATCGTACTTGCAT+TGG | + | chr3.4:48423919-48423938 | None:intergenic | 40.0% | |
| GTCCATATAACAATCGGTGA+TGG | - | chr3.4:48425717-48425736 | MS.gene027118:intron | 40.0% | |
| GTGTTCTGCGTTTGACATTA+CGG | - | chr3.4:48425090-48425109 | MS.gene027118:CDS | 40.0% | |
| GTTCCGTATTCAACAACTGA+AGG | + | chr3.4:48423644-48423663 | None:intergenic | 40.0% | |
| TACGATGTTAACCTGATACC+TGG | - | chr3.4:48423926-48423945 | MS.gene027118:intron | 40.0% | |
| TGAACAGACAGATCTGTCAA+AGG | - | chr3.4:48425388-48425407 | MS.gene027118:CDS | 40.0% | |
| TGACCGTTTCTACTCAACTT+TGG | - | chr3.4:48424580-48424599 | MS.gene027118:intron | 40.0% | |
| TGATCCTGTCAGTAACTTCA+AGG | - | chr3.4:48422929-48422948 | MS.gene027118:CDS | 40.0% | |
| TGTTGAATACGGAACATTGC+CGG | - | chr3.4:48423649-48423668 | MS.gene027118:intron | 40.0% | |
| TTGACCTTGAAGTTACTGAC+AGG | + | chr3.4:48422936-48422955 | None:intergenic | 40.0% | |
| ! | AAAATGCCGTTTGAGGAAAG+TGG | - | chr3.4:48424112-48424131 | MS.gene027118:intron | 40.0% |
| ! | ACATGAAAAGCGTGTATTCC+AGG | - | chr3.4:48423553-48423572 | MS.gene027118:CDS | 40.0% |
| ! | CATATAACAATCGGTGATGG+AGG | - | chr3.4:48425720-48425739 | MS.gene027118:intron | 40.0% |
| ! | CTCCATCACCGATTGTTATA+TGG | + | chr3.4:48425722-48425741 | None:intergenic | 40.0% |
| ! | GATGTGATCCAACGTTGATT+TGG | + | chr3.4:48423894-48423913 | None:intergenic | 40.0% |
| ! | GGTGCTGTCCATATAACAAT+CGG | - | chr3.4:48425711-48425730 | MS.gene027118:intron | 40.0% |
| ! | TGAAGGTGCAGATTTGTCAT+CGG | + | chr3.4:48423627-48423646 | None:intergenic | 40.0% |
| !! | GTTTACTTTTACCGATGTGG+TGG | - | chr3.4:48423779-48423798 | MS.gene027118:intron | 40.0% |
| !! | TGTAAGGTTTTTCTAGGAGG+AGG | + | chr3.4:48422979-48422998 | None:intergenic | 40.0% |
| !! | TTGATTTGGTCCAACCAGTT+TGG | + | chr3.4:48423880-48423899 | None:intergenic | 40.0% |
| !!! | AGCGTCGATTTAGTTTTTGC+TGG | - | chr3.4:48425536-48425555 | MS.gene027118:intron | 40.0% |
| !!! | CCAATTAGTTTTGCTGTGGT+TGG | - | chr3.4:48423845-48423864 | MS.gene027118:intron | 40.0% |
| AACACAGCTCATCAAGGTGA+AGG | - | chr3.4:48425470-48425489 | MS.gene027118:intron | 45.0% | |
| ACAGACAGATCTGTCAAAGG+TGG | - | chr3.4:48425391-48425410 | MS.gene027118:CDS | 45.0% | |
| ACCACCTTCTTATCCTCAAC+AGG | - | chr3.4:48423017-48423036 | MS.gene027118:CDS | 45.0% | |
| ACCTGTTGAGGATAAGAAGG+TGG | + | chr3.4:48423021-48423040 | None:intergenic | 45.0% | |
| ACGCTAGCAGCATAAAGCAA+TGG | + | chr3.4:48425521-48425540 | None:intergenic | 45.0% | |
| AGATTTGTCATCGGTGATCC+AGG | + | chr3.4:48423618-48423637 | None:intergenic | 45.0% | |
| AGCATAAAGCAATGGCTCCA+TGG | + | chr3.4:48425513-48425532 | None:intergenic | 45.0% | |
| AGGGGTTGTTTAACCTGTTG+AGG | + | chr3.4:48423033-48423052 | None:intergenic | 45.0% | |
| ATATAGATCCACAGCCGAAG+TGG | - | chr3.4:48425920-48425939 | MS.gene027118:intron | 45.0% | |
| CAGGTACACATTTCATTGGC+AGG | - | chr3.4:48423572-48423591 | MS.gene027118:CDS | 45.0% | |
| CCGATTATATCCAGCATCGT+TGG | - | chr3.4:48423963-48423982 | MS.gene027118:intron | 45.0% | |
| CTAAAGGGCCTATTACCGTA+TGG | + | chr3.4:48423748-48423767 | None:intergenic | 45.0% | |
| CTGCCAATGAAATGTGTACC+TGG | + | chr3.4:48423574-48423593 | None:intergenic | 45.0% | |
| GAATTCCGTGAAGCCAGTTT+CGG | - | chr3.4:48425946-48425965 | MS.gene027118:intron | 45.0% | |
| GCTTCTCTCTTCCCTTGATA+AGG | - | chr3.4:48424791-48424810 | MS.gene027118:intron | 45.0% | |
| GGTGCACACATTATCATGCT+TGG | - | chr3.4:48424172-48424191 | MS.gene027118:intron | 45.0% | |
| GTTATATGGACAGCACCACA+AGG | + | chr3.4:48425708-48425727 | None:intergenic | 45.0% | |
| GTTGAATACGGAACATTGCC+GGG | - | chr3.4:48423650-48423669 | MS.gene027118:intron | 45.0% | |
| TAAACGCAACACATGCCTTC+TGG | - | chr3.4:48425989-48426008 | MS.gene027118:intron | 45.0% | |
| TAGTTCACCATGACCGAAAC+TGG | + | chr3.4:48425962-48425981 | None:intergenic | 45.0% | |
| TCACGGAATTCTGACCACTT+CGG | + | chr3.4:48425937-48425956 | None:intergenic | 45.0% | |
| TCCAAGGCAACTACCAATTG+TGG | + | chr3.4:48425310-48425329 | None:intergenic | 45.0% | |
| TGGTTGGACCAAATCAACGT+TGG | - | chr3.4:48423883-48423902 | MS.gene027118:intron | 45.0% | |
| TGTCAAAGGTGGACAGGAAA+AGG | - | chr3.4:48425402-48425421 | MS.gene027118:CDS | 45.0% | |
| TTCCCTTGTGTTACCATCCA+CGG | + | chr3.4:48424031-48424050 | None:intergenic | 45.0% | |
| TTGAATACGGAACATTGCCG+GGG | - | chr3.4:48423651-48423670 | MS.gene027118:intron | 45.0% | |
| TTGCGTCATTGATGTTTGGC+AGG | - | chr3.4:48425896-48425915 | MS.gene027118:intron | 45.0% | |
| ! | GAAGGTGGTTTAGAATCCCA+TGG | + | chr3.4:48423006-48423025 | None:intergenic | 45.0% |
| ! | GAGATGGAAAATGCCGTTTG+AGG | - | chr3.4:48424105-48424124 | MS.gene027118:intron | 45.0% |
| ! | TTTGCTGTGGTTGGAGATCT+TGG | - | chr3.4:48423854-48423873 | MS.gene027118:intron | 45.0% |
| !!! | TTTTACCGATGTGGTGGACA+AGG | - | chr3.4:48423785-48423804 | MS.gene027118:intron | 45.0% |
| AATTCTGACCACTTCGGCTG+TGG | + | chr3.4:48425931-48425950 | None:intergenic | 50.0% | |
| ACAGCTCATCAAGGTGAAGG+TGG | - | chr3.4:48425473-48425492 | MS.gene027118:intron | 50.0% | |
| AGACCGTGGATGGTAACACA+AGG | - | chr3.4:48424025-48424044 | MS.gene027118:intron | 50.0% | |
| AGGCAACTACCAATTGTGGC+CGG | + | chr3.4:48425306-48425325 | None:intergenic | 50.0% | |
| ATACCGAGCGTTCATATGCG+TGG | + | chr3.4:48425568-48425587 | None:intergenic | 50.0% | |
| ATCGTTGGGACACGTTTGGT+AGG | - | chr3.4:48423978-48423997 | MS.gene027118:intron | 50.0% | |
| CAGATCTGTCAAAGGTGGAC+AGG | - | chr3.4:48425396-48425415 | MS.gene027118:CDS | 50.0% | |
| CAGGCTCATCATCGTCATTC+CGG | + | chr3.4:48426023-48426042 | None:intergenic | 50.0% | |
| GACCGTGGATGGTAACACAA+GGG | - | chr3.4:48424026-48424045 | MS.gene027118:intron | 50.0% | |
| GAGATCTTGGCCAAACTGGT+TGG | - | chr3.4:48423867-48423886 | MS.gene027118:intron | 50.0% | |
| GTTGGAGATCTTGGCCAAAC+TGG | - | chr3.4:48423863-48423882 | MS.gene027118:intron | 50.0% | |
| TGGACAGGAAAAGGACACCT+TGG | - | chr3.4:48425411-48425430 | MS.gene027118:CDS | 50.0% | |
| TGTCCACGCATATGAACGCT+CGG | - | chr3.4:48425562-48425581 | MS.gene027118:intron | 50.0% | |
| ! | CACGGTCTAGAACTAGCAAG+TGG | + | chr3.4:48424013-48424032 | None:intergenic | 50.0% |
| ! | CATGACCGAAACTGGCTTCA+CGG | + | chr3.4:48425954-48425973 | None:intergenic | 50.0% |
| ! | GCCACAATTGGTAGTTGCCT+TGG | - | chr3.4:48425306-48425325 | MS.gene027118:CDS | 50.0% |
| !! | CAACACATGCCTTCTGGAGT+TGG | - | chr3.4:48425995-48426014 | MS.gene027118:intron | 50.0% |
| !! | CACTTGCTAGTTCTAGACCG+TGG | - | chr3.4:48424011-48424030 | MS.gene027118:intron | 50.0% |
| !! | GGTGATGGAGGGAACAAAGA+AGG | - | chr3.4:48425732-48425751 | MS.gene027118:intron | 50.0% |
| !! | TGCTAGTTCTAGACCGTGGA+TGG | - | chr3.4:48424015-48424034 | MS.gene027118:intron | 50.0% |
| !!! | GAGCTGGTGTTGTTTTGAGC+TGG | + | chr3.4:48423820-48423839 | None:intergenic | 50.0% |
| !!! | GTTGTTTTGAGCTGGAGCTC+AGG | + | chr3.4:48423812-48423831 | None:intergenic | 50.0% |
| ACGAAAGGTCGCCAGGTATC+AGG | + | chr3.4:48423940-48423959 | None:intergenic | 55.0% | |
| CAAACGTGTCCCAACGATGC+TGG | + | chr3.4:48423976-48423995 | None:intergenic | 55.0% | |
| CAGCATCGTTGGGACACGTT+TGG | - | chr3.4:48423974-48423993 | MS.gene027118:intron | 55.0% | |
| CAGGACCTTGTCCACCACAT+CGG | + | chr3.4:48423793-48423812 | None:intergenic | 55.0% | |
| CGTGAAGCCAGTTTCGGTCA+TGG | - | chr3.4:48425952-48425971 | MS.gene027118:intron | 55.0% | |
| ! | ATTCCGGTGCCAACTCCAGA+AGG | + | chr3.4:48426007-48426026 | None:intergenic | 55.0% |
| !! | ATGCCTTCTGGAGTTGGCAC+CGG | - | chr3.4:48426001-48426020 | MS.gene027118:CDS | 55.0% |
| TCGGCATACGAAAGGTCGCC+AGG | + | chr3.4:48423947-48423966 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 48422898 | 48426137 | 48422898 | ID=MS.gene027118 |
| chr3.4 | mRNA | 48422898 | 48426137 | 48422898 | ID=MS.gene027118.t1;Parent=MS.gene027118 |
| chr3.4 | exon | 48425997 | 48426137 | 48425997 | ID=MS.gene027118.t1.exon1;Parent=MS.gene027118.t1 |
| chr3.4 | CDS | 48425997 | 48426137 | 48425997 | ID=cds.MS.gene027118.t1;Parent=MS.gene027118.t1 |
| chr3.4 | exon | 48424792 | 48425460 | 48424792 | ID=MS.gene027118.t1.exon2;Parent=MS.gene027118.t1 |
| chr3.4 | CDS | 48424792 | 48425460 | 48424792 | ID=cds.MS.gene027118.t1;Parent=MS.gene027118.t1 |
| chr3.4 | exon | 48423452 | 48423640 | 48423452 | ID=MS.gene027118.t1.exon3;Parent=MS.gene027118.t1 |
| chr3.4 | CDS | 48423452 | 48423640 | 48423452 | ID=cds.MS.gene027118.t1;Parent=MS.gene027118.t1 |
| chr3.4 | exon | 48423269 | 48423357 | 48423269 | ID=MS.gene027118.t1.exon4;Parent=MS.gene027118.t1 |
| chr3.4 | CDS | 48423269 | 48423357 | 48423269 | ID=cds.MS.gene027118.t1;Parent=MS.gene027118.t1 |
| chr3.4 | exon | 48422898 | 48423117 | 48422898 | ID=MS.gene027118.t1.exon5;Parent=MS.gene027118.t1 |
| chr3.4 | CDS | 48422898 | 48423117 | 48422898 | ID=cds.MS.gene027118.t1;Parent=MS.gene027118.t1 |
| Gene Sequence |
| Protein sequence |
