Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007238.t1 | XP_003625798.2 | 95.8 | 427 | 18 | 0 | 1 | 427 | 1 | 427 | 5.20E-252 | 879.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007238.t1 | Q9LXI7 | 63.5 | 422 | 148 | 5 | 10 | 426 | 6 | 426 | 3.6e-161 | 569.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007238.t1 | G7L619 | 95.8 | 427 | 18 | 0 | 1 | 427 | 1 | 427 | 3.7e-252 | 879.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene007238 | MS.gene85567 | PPI |
| MS.gene94360 | MS.gene007238 | PPI |
| MS.gene007238 | MS.gene82712 | PPI |
| MS.gene007238 | MS.gene82708 | PPI |
| MS.gene007238 | MS.gene94357 | PPI |
| MS.gene007238 | MS.gene30156 | PPI |
| MS.gene007238 | MS.gene027118 | PPI |
| MS.gene30151 | MS.gene007238 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007238.t1 | MTR_7g104360 | 95.785 | 427 | 18 | 0 | 1 | 427 | 1 | 427 | 0.0 | 860 |
| MS.gene007238.t1 | MTR_7g104330 | 61.000 | 400 | 153 | 2 | 27 | 425 | 34 | 431 | 0.0 | 535 |
| MS.gene007238.t1 | MTR_1g060360 | 59.615 | 416 | 165 | 2 | 11 | 425 | 10 | 423 | 0.0 | 532 |
| MS.gene007238.t1 | MTR_3g051240 | 61.519 | 395 | 147 | 4 | 27 | 419 | 22 | 413 | 5.29e-178 | 504 |
| MS.gene007238.t1 | MTR_5g092360 | 60.652 | 399 | 150 | 4 | 27 | 421 | 26 | 421 | 1.04e-172 | 491 |
| MS.gene007238.t1 | MTR_4g115670 | 42.233 | 412 | 209 | 9 | 30 | 416 | 40 | 447 | 5.19e-100 | 306 |
| MS.gene007238.t1 | MTR_0188s0020 | 41.274 | 424 | 212 | 12 | 34 | 423 | 41 | 461 | 9.97e-96 | 295 |
| MS.gene007238.t1 | MTR_4g037105 | 40.431 | 418 | 212 | 11 | 33 | 416 | 34 | 448 | 4.85e-90 | 280 |
| MS.gene007238.t1 | MTR_3g083810 | 37.131 | 474 | 205 | 10 | 32 | 416 | 56 | 525 | 5.51e-88 | 278 |
| MS.gene007238.t1 | MTR_6g013050 | 36.304 | 460 | 199 | 10 | 47 | 416 | 71 | 526 | 2.77e-87 | 277 |
| MS.gene007238.t1 | MTR_1g112630 | 40.000 | 400 | 209 | 11 | 45 | 416 | 54 | 450 | 3.88e-87 | 273 |
| MS.gene007238.t1 | MTR_3g083820 | 36.498 | 474 | 208 | 10 | 32 | 416 | 56 | 525 | 1.16e-86 | 274 |
| MS.gene007238.t1 | MTR_7g056403 | 38.860 | 386 | 164 | 6 | 99 | 416 | 143 | 524 | 1.18e-84 | 269 |
| MS.gene007238.t1 | MTR_6g013050 | 35.945 | 434 | 184 | 9 | 47 | 391 | 71 | 499 | 5.55e-78 | 251 |
| MS.gene007238.t1 | MTR_4g037670 | 27.363 | 402 | 216 | 12 | 47 | 385 | 216 | 604 | 1.44e-33 | 133 |
| MS.gene007238.t1 | MTR_1g052505 | 26.558 | 369 | 215 | 9 | 47 | 359 | 194 | 562 | 7.95e-33 | 130 |
| MS.gene007238.t1 | MTR_4g082930 | 27.778 | 414 | 219 | 13 | 47 | 385 | 144 | 552 | 1.76e-30 | 124 |
| MS.gene007238.t1 | MTR_4g082940 | 27.750 | 400 | 223 | 13 | 47 | 385 | 144 | 538 | 7.48e-30 | 122 |
| MS.gene007238.t1 | MTR_3g074930 | 25.854 | 410 | 239 | 13 | 55 | 405 | 196 | 599 | 1.24e-29 | 121 |
| MS.gene007238.t1 | MTR_3g074930 | 25.553 | 407 | 238 | 13 | 58 | 405 | 192 | 592 | 6.13e-29 | 119 |
| MS.gene007238.t1 | MTR_4g103520 | 25.980 | 408 | 235 | 13 | 58 | 405 | 119 | 519 | 1.25e-26 | 112 |
| MS.gene007238.t1 | MTR_4g103520 | 25.980 | 408 | 235 | 13 | 58 | 405 | 196 | 596 | 1.34e-26 | 112 |
| MS.gene007238.t1 | MTR_5g045600 | 24.760 | 416 | 230 | 13 | 58 | 405 | 188 | 588 | 1.21e-24 | 107 |
| MS.gene007238.t1 | MTR_3g074970 | 25.377 | 398 | 205 | 12 | 58 | 405 | 141 | 496 | 2.21e-24 | 105 |
| MS.gene007238.t1 | MTR_8g063080 | 25.141 | 354 | 209 | 11 | 102 | 407 | 238 | 583 | 1.30e-21 | 97.8 |
| MS.gene007238.t1 | MTR_5g092450 | 49.351 | 77 | 19 | 1 | 315 | 391 | 11 | 67 | 3.65e-15 | 70.9 |
| MS.gene007238.t1 | MTR_5g092300 | 50.000 | 54 | 27 | 0 | 368 | 421 | 9 | 62 | 1.43e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene007238.t1 | AT3G52780 | 63.507 | 422 | 148 | 5 | 10 | 426 | 6 | 426 | 0.0 | 557 |
| MS.gene007238.t1 | AT3G52820 | 61.323 | 393 | 149 | 2 | 28 | 419 | 28 | 418 | 2.33e-180 | 510 |
| MS.gene007238.t1 | AT3G20500 | 57.210 | 423 | 170 | 5 | 12 | 426 | 5 | 424 | 3.37e-174 | 494 |
| MS.gene007238.t1 | AT3G52810 | 53.052 | 426 | 189 | 3 | 11 | 427 | 7 | 430 | 1.18e-161 | 462 |
| MS.gene007238.t1 | AT3G52780 | 61.677 | 334 | 122 | 5 | 10 | 338 | 6 | 338 | 1.91e-148 | 426 |
| MS.gene007238.t1 | AT5G34850 | 40.967 | 393 | 205 | 8 | 45 | 412 | 52 | 442 | 9.16e-95 | 293 |
| MS.gene007238.t1 | AT3G07130 | 40.992 | 383 | 157 | 6 | 99 | 416 | 137 | 515 | 1.27e-88 | 279 |
| MS.gene007238.t1 | AT1G56360 | 39.604 | 404 | 209 | 11 | 45 | 416 | 48 | 448 | 5.08e-88 | 275 |
| MS.gene007238.t1 | AT2G27190 | 38.776 | 441 | 229 | 12 | 11 | 416 | 19 | 453 | 7.96e-88 | 275 |
| MS.gene007238.t1 | AT4G36350 | 39.120 | 409 | 215 | 11 | 39 | 416 | 43 | 448 | 2.70e-86 | 271 |
| MS.gene007238.t1 | AT2G16430 | 35.745 | 470 | 254 | 14 | 2 | 427 | 3 | 468 | 3.26e-84 | 266 |
| MS.gene007238.t1 | AT3G07130 | 37.740 | 416 | 157 | 7 | 99 | 416 | 137 | 548 | 8.23e-82 | 262 |
| MS.gene007238.t1 | AT2G18130 | 37.722 | 395 | 206 | 8 | 45 | 416 | 52 | 429 | 1.23e-81 | 258 |
| MS.gene007238.t1 | AT4G13700 | 38.727 | 377 | 174 | 7 | 47 | 370 | 65 | 437 | 2.34e-78 | 250 |
| MS.gene007238.t1 | AT2G16430 | 38.372 | 344 | 182 | 8 | 112 | 427 | 7 | 348 | 5.20e-74 | 235 |
| MS.gene007238.t1 | AT2G32770 | 37.692 | 390 | 166 | 6 | 99 | 414 | 146 | 532 | 4.47e-72 | 236 |
| MS.gene007238.t1 | AT2G32770 | 37.705 | 366 | 151 | 6 | 99 | 390 | 65 | 427 | 3.36e-65 | 215 |
| MS.gene007238.t1 | AT4G13700 | 36.471 | 340 | 159 | 7 | 47 | 333 | 65 | 400 | 2.20e-61 | 204 |
| MS.gene007238.t1 | AT3G46120 | 35.000 | 400 | 157 | 13 | 45 | 416 | 52 | 376 | 6.16e-60 | 200 |
| MS.gene007238.t1 | AT2G32770 | 33.590 | 390 | 153 | 7 | 99 | 414 | 146 | 503 | 1.66e-56 | 194 |
| MS.gene007238.t1 | AT1G52940 | 36.245 | 229 | 130 | 6 | 45 | 257 | 13 | 241 | 1.60e-35 | 131 |
| MS.gene007238.t1 | AT2G03450 | 26.852 | 432 | 241 | 13 | 47 | 407 | 143 | 570 | 5.44e-32 | 129 |
| MS.gene007238.t1 | AT1G13900 | 27.361 | 413 | 224 | 11 | 47 | 388 | 145 | 552 | 3.28e-31 | 126 |
| MS.gene007238.t1 | AT5G50400 | 25.568 | 352 | 206 | 9 | 102 | 405 | 165 | 508 | 6.33e-25 | 107 |
| MS.gene007238.t1 | AT5G50400 | 25.568 | 352 | 206 | 9 | 102 | 405 | 237 | 580 | 7.36e-25 | 107 |
| MS.gene007238.t1 | AT1G13750 | 25.369 | 406 | 240 | 13 | 58 | 405 | 182 | 582 | 6.33e-22 | 99.0 |
| MS.gene007238.t1 | AT4G24890 | 24.857 | 350 | 207 | 9 | 102 | 403 | 241 | 582 | 1.31e-21 | 97.8 |
Find 116 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGCTTGGCTTTCTTGATTT+TGG | 0.113918 | 7.3:-9987523 | MS.gene007238:CDS |
| CGGATTCTTCACAATATAAA+TGG | 0.234250 | 7.3:-9984861 | MS.gene007238:CDS |
| GAAATTCACAATGTCGTAAT+TGG | 0.266816 | 7.3:-9985634 | MS.gene007238:CDS |
| GCTCAATTTCCTATCAAGTT+TGG | 0.270262 | 7.3:-9985535 | MS.gene007238:CDS |
| GTTTCAACATTGAAGCATTT+AGG | 0.285278 | 7.3:-9985186 | MS.gene007238:CDS |
| AGCCGGAGATATCACTATTC+AGG | 0.296214 | 7.3:-9984144 | MS.gene007238:CDS |
| CGGTAGTAGTAGACTGTATT+AGG | 0.306177 | 7.3:+9985601 | None:intergenic |
| GGGATTTACAGAAGGTTAAC+AGG | 0.315844 | 7.3:-9984831 | MS.gene007238:CDS |
| ATGGGACTCCTTTGGTCGTT+TGG | 0.324190 | 7.3:-9985097 | MS.gene007238:CDS |
| ACACGGGTTTATAAAGATAA+AGG | 0.345618 | 7.3:-9984401 | MS.gene007238:CDS |
| CCTATCAAGTTTGGAGTAGT+TGG | 0.351322 | 7.3:-9985526 | MS.gene007238:intron |
| CATTATGCTCTTTACGAGTC+TGG | 0.351625 | 7.3:-9985658 | MS.gene007238:CDS |
| GGCGTTCATGTTATCATGTT+GGG | 0.362060 | 7.3:-9984904 | MS.gene007238:CDS |
| TTAAAATGTGCAGGAGATCT+TGG | 0.371273 | 7.3:-9985225 | MS.gene007238:intron |
| CCAACTACTCCAAACTTGAT+AGG | 0.374281 | 7.3:+9985526 | None:intergenic |
| TAATGTACTGTTGCTGGAGT+TGG | 0.378392 | 7.3:+9985736 | None:intergenic |
| TAATTCTAATGAAGCTCATC+AGG | 0.380523 | 7.3:-9984764 | MS.gene007238:CDS |
| CAAAATTTATGGGACTCCTT+TGG | 0.387876 | 7.3:-9985105 | MS.gene007238:CDS |
| CTATTCAGGGAGGCTAGCTT+TGG | 0.390382 | 7.3:-9984130 | MS.gene007238:CDS |
| TACAGTCTACTACTACCGTT+TGG | 0.396619 | 7.3:-9985596 | MS.gene007238:CDS |
| ATATCTCCGGCTTAGGATCT+TGG | 0.405801 | 7.3:+9984155 | None:intergenic |
| TCACAATATAAATGGCTTCA+AGG | 0.411262 | 7.3:-9984853 | MS.gene007238:CDS |
| TCTGATCCACTTTCTTCAAA+TGG | 0.413507 | 7.3:+9984958 | None:intergenic |
| CATTTATATTGTGAAGAATC+CGG | 0.413645 | 7.3:+9984862 | None:intergenic |
| AATGGCTCTTTGTGGACAAC+TGG | 0.417454 | 7.3:+9985009 | None:intergenic |
| TGAAGAATCCGGGGCAAAAT+CGG | 0.417615 | 7.3:+9984873 | None:intergenic |
| CATGGACGTTGGCTTGCATA+TGG | 0.419335 | 7.3:+9985069 | None:intergenic |
| GTCCAGTGCATATTACCATT+GGG | 0.419767 | 7.3:-9984367 | MS.gene007238:CDS |
| CTGTTGTTAGTGACTCTGTT+TGG | 0.424993 | 7.3:-9984036 | MS.gene007238:CDS |
| CACAATATAAATGGCTTCAA+GGG | 0.433408 | 7.3:-9984852 | MS.gene007238:CDS |
| GCAAACGCACTTTCTGCTAC+TGG | 0.439584 | 7.3:-9985697 | MS.gene007238:CDS |
| ATGCTGTGAATGGCTCTTTG+TGG | 0.445955 | 7.3:+9985001 | None:intergenic |
| AGAAAACAAAATGAGATTGA+AGG | 0.450243 | 7.3:-9987559 | None:intergenic |
| GGGCCGTAATGTACTGTTGC+TGG | 0.451978 | 7.3:+9985730 | None:intergenic |
| AAGTTATTCTCATCTTGTCT+TGG | 0.452713 | 7.3:+9985773 | None:intergenic |
| TGATGACTCATCGCCACAAC+AGG | 0.452995 | 7.3:-9987424 | MS.gene007238:intron |
| CTGGAATCTTCTCAATATCA+TGG | 0.462576 | 7.3:+9985028 | None:intergenic |
| AATGTACTGTTGCTGGAGTT+GGG | 0.467070 | 7.3:+9985737 | None:intergenic |
| TTATTTATTACCTTGTGGCT+AGG | 0.467832 | 7.3:+9984324 | None:intergenic |
| TGGTGTTGGTTCATGCTCCT+TGG | 0.467959 | 7.3:-9984789 | MS.gene007238:CDS |
| ACACATCAAAAGAATAGTAT+AGG | 0.472739 | 7.3:+9984929 | None:intergenic |
| AACTCCTTGGGTAGTGGTGT+TGG | 0.478876 | 7.3:-9984803 | MS.gene007238:CDS |
| TGGCGTTCATGTTATCATGT+TGG | 0.483228 | 7.3:-9984905 | MS.gene007238:CDS |
| TCCCCAATGGTAATATGCAC+TGG | 0.487432 | 7.3:+9984365 | None:intergenic |
| AATAGTGATATCTCCGGCTT+AGG | 0.487856 | 7.3:+9984148 | None:intergenic |
| ATTTATATTGTGAAGAATCC+GGG | 0.492291 | 7.3:+9984863 | None:intergenic |
| AGTGCGTTTGCTGAAGGAGA+TGG | 0.500114 | 7.3:+9985709 | None:intergenic |
| TGGTCGATTGTAGCAATAAA+CGG | 0.502539 | 7.3:+9987482 | None:intergenic |
| CAGACTCGTAAAGAGCATAA+TGG | 0.503425 | 7.3:+9985659 | None:intergenic |
| GGTCCAGTGCATATTACCAT+TGG | 0.503837 | 7.3:-9984368 | MS.gene007238:CDS |
| CAAACAGAGTCACTAACAAC+AGG | 0.504537 | 7.3:+9984037 | None:intergenic |
| AAAATCAAGAAAGCCAAGCC+TGG | 0.505701 | 7.3:+9987525 | None:intergenic |
| GCCGGAGATATCACTATTCA+GGG | 0.507404 | 7.3:-9984143 | MS.gene007238:CDS |
| ACAGTCTACTACTACCGTTT+GGG | 0.511791 | 7.3:-9985595 | MS.gene007238:CDS |
| CATCACATGCACTTTGGAGT+TGG | 0.513462 | 7.3:-9984081 | MS.gene007238:CDS |
| CTTGCATTGTATGCTGTGAA+TGG | 0.517458 | 7.3:+9984991 | None:intergenic |
| CATATGCAAGCCAACGTCCA+TGG | 0.524535 | 7.3:-9985068 | MS.gene007238:CDS |
| GAAAACAAAATGAGATTGAA+GGG | 0.525206 | 7.3:-9987558 | None:intergenic |
| TTATATCAAGCTTTACAAGC+GGG | 0.525253 | 7.3:+9983992 | None:intergenic |
| ATGTCGTAATTGGTCCCCTC+AGG | 0.528114 | 7.3:-9985624 | MS.gene007238:CDS |
| TCTGCGTAGGATAAGTCTCC+TGG | 0.542667 | 7.3:+9985135 | None:intergenic |
| TACAAGCGGGGTCAGAGGAA+AGG | 0.545501 | 7.3:+9984005 | None:intergenic |
| CAAATGCCATTTGAAGAAAG+TGG | 0.549954 | 7.3:-9984964 | MS.gene007238:CDS |
| TTAACGCATCACATGCACTT+TGG | 0.554229 | 7.3:-9984087 | MS.gene007238:CDS |
| GTGCGTTTGCTGAAGGAGAT+GGG | 0.554869 | 7.3:+9985710 | None:intergenic |
| CGTCCATGGATGGTCACTAC+AGG | 0.563495 | 7.3:-9985054 | MS.gene007238:CDS |
| GCAGAAAGTGCGTTTGCTGA+AGG | 0.564712 | 7.3:+9985703 | None:intergenic |
| AGCATAATGGTAAGAAGTGG+TGG | 0.564797 | 7.3:+9985672 | None:intergenic |
| AAAGATAAAGGTGACAATTG+TGG | 0.564863 | 7.3:-9984389 | MS.gene007238:CDS |
| GCTTCAAGGGGATTTACAGA+AGG | 0.567207 | 7.3:-9984839 | MS.gene007238:CDS |
| AAGACAAGATGAGAATAACT+TGG | 0.568409 | 7.3:-9985771 | MS.gene007238:CDS |
| TTTCCTGTAGTGACCATCCA+TGG | 0.568592 | 7.3:+9985051 | None:intergenic |
| CATATTACCATTGGGGATGG+AGG | 0.568634 | 7.3:-9984359 | MS.gene007238:CDS |
| GTGCATATTACCATTGGGGA+TGG | 0.568742 | 7.3:-9984362 | MS.gene007238:CDS |
| TTGGCATAAGAATGATAATG+AGG | 0.569656 | 7.3:-9984062 | MS.gene007238:CDS |
| AGCTTTACAAGCGGGGTCAG+AGG | 0.579456 | 7.3:+9984000 | None:intergenic |
| ACTCCAGCAACAGTACATTA+CGG | 0.579797 | 7.3:-9985733 | MS.gene007238:CDS |
| TGCAAGCCAACGTCCATGGA+TGG | 0.582098 | 7.3:-9985064 | MS.gene007238:CDS |
| TACGATATGCTATTATTACC+AGG | 0.585952 | 7.3:-9985153 | MS.gene007238:CDS |
| TAATGAAGCTCATCAGGGTG+AGG | 0.588950 | 7.3:-9984758 | MS.gene007238:CDS |
| GTAGGTACATATATCTCAAG+TGG | 0.589069 | 7.3:-9985797 | MS.gene007238:intron |
| AATACTTACAAAGCGTTCGT+AGG | 0.596937 | 7.3:+9984651 | None:intergenic |
| ACAATATAAATGGCTTCAAG+GGG | 0.601935 | 7.3:-9984851 | MS.gene007238:CDS |
| TATATCAAGCTTTACAAGCG+GGG | 0.605982 | 7.3:+9983993 | None:intergenic |
| AGGGAGGCTAGCTTTGGACA+TGG | 0.606219 | 7.3:-9984124 | MS.gene007238:CDS |
| CATTCACAGCATACAATGCA+AGG | 0.607221 | 7.3:-9984990 | MS.gene007238:CDS |
| TCCCTGAATAGTGATATCTC+CGG | 0.607511 | 7.3:+9984142 | None:intergenic |
| TGGTTCAACCAAACGACCAA+AGG | 0.610386 | 7.3:+9985089 | None:intergenic |
| ACGATTGCCTCCATCCCCAA+TGG | 0.611597 | 7.3:+9984352 | None:intergenic |
| CTTTGGACATGGAGTACTAG+AGG | 0.617779 | 7.3:-9984113 | MS.gene007238:CDS |
| ATTATATCAAGCTTTACAAG+CGG | 0.619234 | 7.3:+9983991 | None:intergenic |
| AGTAGACTGTATTAGGCCTG+AGG | 0.623439 | 7.3:+9985608 | None:intergenic |
| TGTTGACATGAAGAATGCAA+TGG | 0.623954 | 7.3:-9984728 | MS.gene007238:CDS |
| GTAGACTGTATTAGGCCTGA+GGG | 0.626445 | 7.3:+9985609 | None:intergenic |
| AACTTGATAGGAAATTGAGC+TGG | 0.627265 | 7.3:+9985538 | None:intergenic |
| ATCGTGAAGGCCTAGCCACA+AGG | 0.627603 | 7.3:-9984334 | MS.gene007238:intron |
| GGGGATGGAGGCAATCGTGA+AGG | 0.629344 | 7.3:-9984347 | MS.gene007238:CDS |
| TGAACCAACACCACTACCCA+AGG | 0.629873 | 7.3:+9984799 | None:intergenic |
| GGATTTACAGAAGGTTAACA+GGG | 0.636624 | 7.3:-9984830 | MS.gene007238:CDS |
| TAGGTACCAAGATCCTAAGC+CGG | 0.637082 | 7.3:-9984161 | MS.gene007238:CDS |
| AAGAGCATAATGGTAAGAAG+TGG | 0.638792 | 7.3:+9985669 | None:intergenic |
| TAGGTACATATATCTCAAGT+GGG | 0.638879 | 7.3:-9985796 | MS.gene007238:CDS |
| GATGAGTCATCAAGATCGTG+AGG | 0.640370 | 7.3:+9987435 | None:intergenic |
| TCCAGTGCATATTACCATTG+GGG | 0.646566 | 7.3:-9984366 | MS.gene007238:CDS |
| GACATGAAGAATGCAATGGA+AGG | 0.648913 | 7.3:-9984724 | MS.gene007238:CDS |
| TTTATATTGTGAAGAATCCG+GGG | 0.656506 | 7.3:+9984864 | None:intergenic |
| AATTCTAATGAAGCTCATCA+GGG | 0.664651 | 7.3:-9984763 | MS.gene007238:CDS |
| TGGACATGGAGTACTAGAGG+TGG | 0.683228 | 7.3:-9984110 | MS.gene007238:CDS |
| GAGATCTTGGACAAACAGAG+TGG | 0.690863 | 7.3:-9985212 | MS.gene007238:CDS |
| ATGAGTCATCAAGATCGTGA+GGG | 0.692801 | 7.3:+9987436 | None:intergenic |
| GCTTCATTAGAATTATACCA+AGG | 0.697694 | 7.3:+9984772 | None:intergenic |
| TAGTGACCATCCATGGACGT+TGG | 0.702416 | 7.3:+9985058 | None:intergenic |
| TAGACTGTATTAGGCCTGAG+GGG | 0.723441 | 7.3:+9985610 | None:intergenic |
| GGAGATATCACTATTCAGGG+AGG | 0.752640 | 7.3:-9984140 | MS.gene007238:CDS |
| TCACAGCATACAATGCAAGG+TGG | 0.758498 | 7.3:-9984987 | MS.gene007238:CDS |
| GATTTACAGAAGGTTAACAG+GGG | 0.767404 | 7.3:-9984829 | MS.gene007238:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAAAAGAATAATTACT+AGG | + | chr7.3:9987118-9987137 | None:intergenic | 10.0% |
| !! | TTCATTTAAAAAAAAAAACA+AGG | - | chr7.3:9984849-9984868 | MS.gene007238:CDS | 10.0% |
| !!! | GTAATTTTTTTTATTTAGTT+TGG | + | chr7.3:9984684-9984703 | None:intergenic | 10.0% |
| !! | AAATGAAAATAATAATAGTG+TGG | + | chr7.3:9986070-9986089 | None:intergenic | 15.0% |
| !! | AGTAAAAATTAAGAAAGTTT+AGG | + | chr7.3:9987268-9987287 | None:intergenic | 15.0% |
| !! | ATAAAATAACGAATGTATAT+GGG | + | chr7.3:9985228-9985247 | None:intergenic | 15.0% |
| !! | TATAAAATAACGAATGTATA+TGG | + | chr7.3:9985229-9985248 | None:intergenic | 15.0% |
| !! | TGTTTATTTATTTGTCATAT+AGG | - | chr7.3:9987049-9987068 | MS.gene007238:intron | 15.0% |
| !! | TTATGTTACAATATTGAAAA+AGG | + | chr7.3:9985079-9985098 | None:intergenic | 15.0% |
| !! | TTTATTTATTTATTACCTTG+TGG | + | chr7.3:9987230-9987249 | None:intergenic | 15.0% |
| !!! | AGATTTTGTACAAAATTTAT+GGG | - | chr7.3:9986431-9986450 | MS.gene007238:intron | 15.0% |
| !!! | CAATTTTTTTTTCTTTTATC+TGG | + | chr7.3:9984652-9984671 | None:intergenic | 15.0% |
| !!! | CATAATATATATACTCTTTT+TGG | + | chr7.3:9985286-9985305 | None:intergenic | 15.0% |
| !!! | CTTTATTTTTCATTCAATTT+AGG | + | chr7.3:9985113-9985132 | None:intergenic | 15.0% |
| !!! | TGATTTTAAATAATTGTATG+TGG | - | chr7.3:9987352-9987371 | MS.gene007238:intron | 15.0% |
| !!! | TTTACATATTGTTTTCAATT+TGG | + | chr7.3:9984378-9984397 | None:intergenic | 15.0% |
| !! | AGTATATATATTATGCTCTA+GGG | - | chr7.3:9985291-9985310 | MS.gene007238:intron | 20.0% |
| !! | ATTTACACTAACTAAGAATA+AGG | - | chr7.3:9984793-9984812 | MS.gene007238:CDS | 20.0% |
| !! | CTCTTAAAATTTCATTTACA+TGG | - | chr7.3:9984252-9984271 | MS.gene007238:intron | 20.0% |
| !! | GAAATTACTTGCTTATAATT+TGG | + | chr7.3:9985379-9985398 | None:intergenic | 20.0% |
| !! | GTGATATATTATATTTGGAA+AGG | - | chr7.3:9984610-9984629 | MS.gene007238:intron | 20.0% |
| !!! | AATGTGATATATACTTTTTC+CGG | - | chr7.3:9985168-9985187 | MS.gene007238:CDS | 20.0% |
| !!! | ATTTAAAACAATGAATACCA+TGG | + | chr7.3:9984202-9984221 | None:intergenic | 20.0% |
| !!! | ATTTTTCATTCAATTTAGGA+GGG | + | chr7.3:9985109-9985128 | None:intergenic | 20.0% |
| !!! | CAGATTTTGTACAAAATTTA+TGG | - | chr7.3:9986430-9986449 | MS.gene007238:intron | 20.0% |
| !!! | CTTTTTTATTTTCTTAGACA+CGG | - | chr7.3:9987128-9987147 | MS.gene007238:intron | 20.0% |
| !!! | TATTTTTCATTCAATTTAGG+AGG | + | chr7.3:9985110-9985129 | None:intergenic | 20.0% |
| !!! | TGTTTTCAATTTGGTAATTT+TGG | + | chr7.3:9984369-9984388 | None:intergenic | 20.0% |
| !!! | TTATTTTCATTTGAGAAAAG+TGG | - | chr7.3:9986078-9986097 | MS.gene007238:intron | 20.0% |
| !!! | TTTTTACTTAACATTACCAA+AGG | - | chr7.3:9987280-9987299 | MS.gene007238:intron | 20.0% |
| !!! | TTTTTTATTTTCTTAGACAC+GGG | - | chr7.3:9987129-9987148 | MS.gene007238:intron | 20.0% |
| ! | ACACATCAAAAGAATAGTAT+AGG | + | chr7.3:9986620-9986639 | None:intergenic | 25.0% |
| ! | ACCAGGTGATATATTATATT+TGG | - | chr7.3:9984605-9984624 | MS.gene007238:intron | 25.0% |
| ! | ATCAAGTTATATGTTTGCAT+TGG | - | chr7.3:9984934-9984953 | MS.gene007238:CDS | 25.0% |
| ! | ATTTATATTGTGAAGAATCC+GGG | + | chr7.3:9986686-9986705 | None:intergenic | 25.0% |
| ! | CAATTGTTTATAAATGTGAC+CGG | + | chr7.3:9985190-9985209 | None:intergenic | 25.0% |
| ! | CATTTATATTGTGAAGAATC+CGG | + | chr7.3:9986687-9986706 | None:intergenic | 25.0% |
| ! | CTATCAATTCTTTCATCATA+AGG | + | chr7.3:9985533-9985552 | None:intergenic | 25.0% |
| ! | CTTATGATGAAAGAATTGAT+AGG | - | chr7.3:9985531-9985550 | MS.gene007238:CDS | 25.0% |
| ! | GAGTATATATATTATGCTCT+AGG | - | chr7.3:9985290-9985309 | MS.gene007238:intron | 25.0% |
| ! | TATTTAGATTCAATGCATTC+AGG | + | chr7.3:9986255-9986274 | None:intergenic | 25.0% |
| ! | TCCAAATATAATATATCACC+TGG | + | chr7.3:9984609-9984628 | None:intergenic | 25.0% |
| ! | TTAATTGTATCATAATGACC+AGG | - | chr7.3:9984588-9984607 | MS.gene007238:intron | 25.0% |
| ! | TTATCGTTACTCATACTTAT+AGG | - | chr7.3:9985554-9985573 | MS.gene007238:CDS | 25.0% |
| ! | TTCTCCTTCAAAAAAGAATA+AGG | - | chr7.3:9984821-9984840 | MS.gene007238:CDS | 25.0% |
| ! | TTTCATCATAAGGATTAAAG+AGG | + | chr7.3:9985523-9985542 | None:intergenic | 25.0% |
| !! | AACAAGGTTGAATTTTCAAT+AGG | - | chr7.3:9984865-9984884 | MS.gene007238:CDS | 25.0% |
| !! | ACAAGGTTGAATTTTCAATA+GGG | - | chr7.3:9984866-9984885 | MS.gene007238:CDS | 25.0% |
| !! | AGTAATTTCTTCAATTTGCT+TGG | - | chr7.3:9985390-9985409 | MS.gene007238:intron | 25.0% |
| !! | GCTTATAATTTGGTAATTCT+GGG | + | chr7.3:9985369-9985388 | None:intergenic | 25.0% |
| !! | TGCTTATAATTTGGTAATTC+TGG | + | chr7.3:9985370-9985389 | None:intergenic | 25.0% |
| !!! | AGTAACTGAGTTTTGTTTAA+CGG | - | chr7.3:9984429-9984448 | MS.gene007238:intron | 25.0% |
| !!! | TCAACCTTATTCTTTTTTGA+AGG | + | chr7.3:9984828-9984847 | None:intergenic | 25.0% |
| !!! | TTTTAAAGAAATACCTGTTG+TGG | + | chr7.3:9984138-9984157 | None:intergenic | 25.0% |
| !!! | TTTTAGAAATCGAATCAAAC+TGG | - | chr7.3:9986947-9986966 | MS.gene007238:intron | 25.0% |
| AAAGATAAAGGTGACAATTG+TGG | - | chr7.3:9987157-9987176 | MS.gene007238:intron | 30.0% | |
| AAATAGTGACATTGATGCAT+TGG | + | chr7.3:9985049-9985068 | None:intergenic | 30.0% | |
| AAGACAAGATGAGAATAACT+TGG | - | chr7.3:9985775-9985794 | MS.gene007238:CDS | 30.0% | |
| AAGTTATTCTCATCTTGTCT+TGG | + | chr7.3:9985776-9985795 | None:intergenic | 30.0% | |
| AATGCATCAATGTCACTATT+TGG | - | chr7.3:9985048-9985067 | MS.gene007238:CDS | 30.0% | |
| AATTCTAATGAAGCTCATCA+GGG | - | chr7.3:9986783-9986802 | MS.gene007238:intron | 30.0% | |
| ACAATATAAATGGCTTCAAG+GGG | - | chr7.3:9986695-9986714 | MS.gene007238:intron | 30.0% | |
| ACACGGGTTTATAAAGATAA+AGG | - | chr7.3:9987145-9987164 | MS.gene007238:intron | 30.0% | |
| CACAATATAAATGGCTTCAA+GGG | - | chr7.3:9986694-9986713 | MS.gene007238:intron | 30.0% | |
| CGGATTCTTCACAATATAAA+TGG | - | chr7.3:9986685-9986704 | MS.gene007238:intron | 30.0% | |
| GAAAACAATATGTAAACCGT+TGG | - | chr7.3:9984382-9984401 | MS.gene007238:CDS | 30.0% | |
| GAAATTCACAATGTCGTAAT+TGG | - | chr7.3:9985912-9985931 | MS.gene007238:intron | 30.0% | |
| GCTTCATTAGAATTATACCA+AGG | + | chr7.3:9986777-9986796 | None:intergenic | 30.0% | |
| GGTACTGTACATATATTGTT+GGG | - | chr7.3:9984306-9984325 | MS.gene007238:intron | 30.0% | |
| GTACTGTACATATATTGTTG+GGG | - | chr7.3:9984307-9984326 | MS.gene007238:intron | 30.0% | |
| TAATTCTAATGAAGCTCATC+AGG | - | chr7.3:9986782-9986801 | MS.gene007238:intron | 30.0% | |
| TACGATATGCTATTATTACC+AGG | - | chr7.3:9986393-9986412 | MS.gene007238:intron | 30.0% | |
| TAGGTACATATATCTCAAGT+GGG | - | chr7.3:9985750-9985769 | MS.gene007238:CDS | 30.0% | |
| TATAACTTGATTTCCTTCAC+AGG | + | chr7.3:9984925-9984944 | None:intergenic | 30.0% | |
| TCACAATATAAATGGCTTCA+AGG | - | chr7.3:9986693-9986712 | MS.gene007238:intron | 30.0% | |
| TGAATTGTTCGATCAATATG+TGG | - | chr7.3:9986185-9986204 | MS.gene007238:intron | 30.0% | |
| TGGTACTGTACATATATTGT+TGG | - | chr7.3:9984305-9984324 | MS.gene007238:intron | 30.0% | |
| TTATTTATTACCTTGTGGCT+AGG | + | chr7.3:9987225-9987244 | None:intergenic | 30.0% | |
| TTGAGATATATGTACCTACA+AGG | + | chr7.3:9985748-9985767 | None:intergenic | 30.0% | |
| TTTATATTGTGAAGAATCCG+GGG | + | chr7.3:9986685-9986704 | None:intergenic | 30.0% | |
| ! | ATTTTGTACAAAATCTGCGT+AGG | + | chr7.3:9986427-9986446 | None:intergenic | 30.0% |
| ! | CTTCAATTTGCTTGGAATAA+GGG | - | chr7.3:9985398-9985417 | MS.gene007238:intron | 30.0% |
| ! | GTTTCAACATTGAAGCATTT+AGG | - | chr7.3:9986360-9986379 | MS.gene007238:intron | 30.0% |
| ! | TACTATTCTTTTGATGTGTC+TGG | - | chr7.3:9986621-9986640 | MS.gene007238:intron | 30.0% |
| ! | TCTTCAATTTGCTTGGAATA+AGG | - | chr7.3:9985397-9985416 | MS.gene007238:intron | 30.0% |
| ! | TTGGCATAAGAATGATAATG+AGG | - | chr7.3:9987484-9987503 | MS.gene007238:CDS | 30.0% |
| !! | AATTTGGTAATTCTGGGATT+AGG | + | chr7.3:9985363-9985382 | None:intergenic | 30.0% |
| !! | TTCTTGATTTTGGTATGCTT+AGG | - | chr7.3:9984033-9984052 | MS.gene007238:CDS | 30.0% |
| !!! | GTAACTGAGTTTTGTTTAAC+GGG | - | chr7.3:9984430-9984449 | MS.gene007238:intron | 30.0% |
| AACTTGATAGGAAATTGAGC+TGG | + | chr7.3:9986011-9986030 | None:intergenic | 35.0% | |
| AGAAATCGAATCAAACTGGT+CGG | - | chr7.3:9986951-9986970 | MS.gene007238:intron | 35.0% | |
| CAAAATTTATGGGACTCCTT+TGG | - | chr7.3:9986441-9986460 | MS.gene007238:intron | 35.0% | |
| CTGGAATCTTCTCAATATCA+TGG | + | chr7.3:9986521-9986540 | None:intergenic | 35.0% | |
| GATAACTGAATCAGACTCAA+GGG | + | chr7.3:9985438-9985457 | None:intergenic | 35.0% | |
| GATTTACAGAAGGTTAACAG+GGG | - | chr7.3:9986717-9986736 | MS.gene007238:intron | 35.0% | |
| GCTCAATTTCCTATCAAGTT+TGG | - | chr7.3:9986011-9986030 | MS.gene007238:intron | 35.0% | |
| GGATTTACAGAAGGTTAACA+GGG | - | chr7.3:9986716-9986735 | MS.gene007238:intron | 35.0% | |
| GTAGGTACATATATCTCAAG+TGG | - | chr7.3:9985749-9985768 | MS.gene007238:CDS | 35.0% | |
| TAAACAATTCTGCGCAACTA+AGG | + | chr7.3:9986287-9986306 | None:intergenic | 35.0% | |
| TATGTGCACCGTGATTTAAT+CGG | + | chr7.3:9987090-9987109 | None:intergenic | 35.0% | |
| TCTGATCCACTTTCTTCAAA+TGG | + | chr7.3:9986591-9986610 | None:intergenic | 35.0% | |
| TGCCTATACTTAAAATGTGC+AGG | - | chr7.3:9986312-9986331 | MS.gene007238:intron | 35.0% | |
| TGGATCAAGAACAAAGAATG+TGG | + | chr7.3:9986216-9986235 | None:intergenic | 35.0% | |
| TGGTCGATTGTAGCAATAAA+CGG | + | chr7.3:9984067-9984086 | None:intergenic | 35.0% | |
| TGGTTGAACCGATTAAATCA+CGG | - | chr7.3:9987079-9987098 | MS.gene007238:intron | 35.0% | |
| TGTACATATATTGTTGGGGT+CGG | - | chr7.3:9984311-9984330 | MS.gene007238:intron | 35.0% | |
| TGTTGACATGAAGAATGCAA+TGG | - | chr7.3:9986818-9986837 | MS.gene007238:intron | 35.0% | |
| TTAAAATGTGCAGGAGATCT+TGG | - | chr7.3:9986321-9986340 | MS.gene007238:intron | 35.0% | |
| TTAATCGTATGTATGTGTGC+TGG | - | chr7.3:9984229-9984248 | MS.gene007238:intron | 35.0% | |
| TTCAGTTATCGTAGTGTCTT+TGG | - | chr7.3:9985448-9985467 | MS.gene007238:intron | 35.0% | |
| ! | AAGAGCATAATGGTAAGAAG+TGG | + | chr7.3:9985880-9985899 | None:intergenic | 35.0% |
| ! | AATACTTACAAAGCGTTCGT+AGG | + | chr7.3:9986898-9986917 | None:intergenic | 35.0% |
| ! | CAAATGCCATTTGAAGAAAG+TGG | - | chr7.3:9986582-9986601 | MS.gene007238:intron | 35.0% |
| ! | CAGGTAATCACACTATTTTG+TGG | + | chr7.3:9986236-9986255 | None:intergenic | 35.0% |
| ! | TGATTTAATCGGTTCAACCA+CGG | + | chr7.3:9987079-9987098 | None:intergenic | 35.0% |
| !! | ACAAAAATGGTTTTACGAGG+CGG | + | chr7.3:9984090-9984109 | None:intergenic | 35.0% |
| !! | CTCCTGCACATTTTAAGTAT+AGG | + | chr7.3:9986317-9986336 | None:intergenic | 35.0% |
| !!! | AGTGTCTTTGGTTGGTTTTA+AGG | - | chr7.3:9985460-9985479 | MS.gene007238:intron | 35.0% |
| !!! | GCGTTGATGTTGTTTTTACA+GGG | - | chr7.3:9986862-9986881 | MS.gene007238:intron | 35.0% |
| !!! | GTGTCTTTGGTTGGTTTTAA+GGG | - | chr7.3:9985461-9985480 | MS.gene007238:intron | 35.0% |
| AAAATCAAGAAAGCCAAGCC+TGG | + | chr7.3:9984024-9984043 | None:intergenic | 40.0% | |
| AAACCGTTGGCAGTTAAGAA+TGG | - | chr7.3:9984395-9984414 | MS.gene007238:CDS | 40.0% | |
| AACAAGTGTGTTGTGCTCTT+AGG | - | chr7.3:9984896-9984915 | MS.gene007238:CDS | 40.0% | |
| AACCGTTGGCAGTTAAGAAT+GGG | - | chr7.3:9984396-9984415 | MS.gene007238:CDS | 40.0% | |
| AAGATCGTGAGGGACAAAAA+TGG | + | chr7.3:9984103-9984122 | None:intergenic | 40.0% | |
| AATAGTGATATCTCCGGCTT+AGG | + | chr7.3:9987401-9987420 | None:intergenic | 40.0% | |
| AATGTACTGTTGCTGGAGTT+GGG | + | chr7.3:9985812-9985831 | None:intergenic | 40.0% | |
| ACAGTCTACTACTACCGTTT+GGG | - | chr7.3:9985951-9985970 | MS.gene007238:intron | 40.0% | |
| ACTCCAGCAACAGTACATTA+CGG | - | chr7.3:9985813-9985832 | MS.gene007238:intron | 40.0% | |
| ACTTAACATTACCAAAGGCG+AGG | - | chr7.3:9987285-9987304 | MS.gene007238:intron | 40.0% | |
| AGCATAATGGTAAGAAGTGG+TGG | + | chr7.3:9985877-9985896 | None:intergenic | 40.0% | |
| ATGAGTCATCAAGATCGTGA+GGG | + | chr7.3:9984113-9984132 | None:intergenic | 40.0% | |
| CAAACAGAGTCACTAACAAC+AGG | + | chr7.3:9987512-9987531 | None:intergenic | 40.0% | |
| CACGACAAAAAACTGTTCCA+TGG | - | chr7.3:9984182-9984201 | MS.gene007238:intron | 40.0% | |
| CATTATGCTCTTTACGAGTC+TGG | - | chr7.3:9985888-9985907 | MS.gene007238:intron | 40.0% | |
| CATTCACAGCATACAATGCA+AGG | - | chr7.3:9986556-9986575 | MS.gene007238:intron | 40.0% | |
| CCAACTACTCCAAACTTGAT+AGG | + | chr7.3:9986023-9986042 | None:intergenic | 40.0% | |
| CGATAACTGAATCAGACTCA+AGG | + | chr7.3:9985439-9985458 | None:intergenic | 40.0% | |
| CGGTAGTAGTAGACTGTATT+AGG | + | chr7.3:9985948-9985967 | None:intergenic | 40.0% | |
| CTGTTGTTAGTGACTCTGTT+TGG | - | chr7.3:9987510-9987529 | MS.gene007238:CDS | 40.0% | |
| CTTGCATTGTATGCTGTGAA+TGG | + | chr7.3:9986558-9986577 | None:intergenic | 40.0% | |
| GACATGAAGAATGCAATGGA+AGG | - | chr7.3:9986822-9986841 | MS.gene007238:intron | 40.0% | |
| GGAAGACAATCGAAGAACAA+AGG | + | chr7.3:9985502-9985521 | None:intergenic | 40.0% | |
| GGCGTTCATGTTATCATGTT+GGG | - | chr7.3:9986642-9986661 | MS.gene007238:intron | 40.0% | |
| GGGATTTACAGAAGGTTAAC+AGG | - | chr7.3:9986715-9986734 | MS.gene007238:intron | 40.0% | |
| GTCCAGTGCATATTACCATT+GGG | - | chr7.3:9987179-9987198 | MS.gene007238:intron | 40.0% | |
| GTTATCGTAGTGTCTTTGGT+TGG | - | chr7.3:9985452-9985471 | MS.gene007238:intron | 40.0% | |
| TAACAGGGGAAAAACTCCTT+GGG | - | chr7.3:9986731-9986750 | MS.gene007238:intron | 40.0% | |
| TAATGTACTGTTGCTGGAGT+TGG | + | chr7.3:9985813-9985832 | None:intergenic | 40.0% | |
| TACAGTCTACTACTACCGTT+TGG | - | chr7.3:9985950-9985969 | MS.gene007238:intron | 40.0% | |
| TACTATATACACCTCGCCTT+TGG | + | chr7.3:9987299-9987318 | None:intergenic | 40.0% | |
| TACTTATAGGCAGACAAACC+AGG | - | chr7.3:9985567-9985586 | MS.gene007238:CDS | 40.0% | |
| TCCAGTGCATATTACCATTG+GGG | - | chr7.3:9987180-9987199 | MS.gene007238:intron | 40.0% | |
| TCCCTGAATAGTGATATCTC+CGG | + | chr7.3:9987407-9987426 | None:intergenic | 40.0% | |
| TGGCGTTCATGTTATCATGT+TGG | - | chr7.3:9986641-9986660 | MS.gene007238:intron | 40.0% | |
| TGTATGTGGTGTGTGATGAT+AGG | - | chr7.3:9987366-9987385 | MS.gene007238:intron | 40.0% | |
| TTAACAGGGGAAAAACTCCT+TGG | - | chr7.3:9986730-9986749 | MS.gene007238:intron | 40.0% | |
| TTAACGCATCACATGCACTT+TGG | - | chr7.3:9987459-9987478 | MS.gene007238:CDS | 40.0% | |
| TTCCCATTCTTAACTGCCAA+CGG | + | chr7.3:9984401-9984420 | None:intergenic | 40.0% | |
| TTTGTCATATAGGTCAACCG+TGG | - | chr7.3:9987059-9987078 | MS.gene007238:intron | 40.0% | |
| ! | AAGAGCACAACACACTTGTT+AGG | + | chr7.3:9984896-9984915 | None:intergenic | 40.0% |
| ! | CAGACTCGTAAAGAGCATAA+TGG | + | chr7.3:9985890-9985909 | None:intergenic | 40.0% |
| ! | CCTATCAAGTTTGGAGTAGT+TGG | - | chr7.3:9986020-9986039 | MS.gene007238:intron | 40.0% |
| ! | GAAGAACAAAGGTGTGTAAG+AGG | + | chr7.3:9985491-9985510 | None:intergenic | 40.0% |
| ! | TAAGATTGTGTGAGCCTTGT+AGG | - | chr7.3:9985731-9985750 | MS.gene007238:CDS | 40.0% |
| ! | TTGAAGGGAACACATTTTCC+AGG | - | chr7.3:9984003-9984022 | MS.gene007238:CDS | 40.0% |
| ! | TTTTTGCTGAGTCACCCAAA+CGG | + | chr7.3:9985968-9985987 | None:intergenic | 40.0% |
| !! | AGGCTTGGCTTTCTTGATTT+TGG | - | chr7.3:9984023-9984042 | MS.gene007238:CDS | 40.0% |
| !! | GGGACAAAAATGGTTTTACG+AGG | + | chr7.3:9984093-9984112 | None:intergenic | 40.0% |
| !!! | AGTTTTGTTTAACGGGATGC+TGG | - | chr7.3:9984437-9984456 | MS.gene007238:intron | 40.0% |
| !!! | CGCGTTGATGTTGTTTTTAC+AGG | - | chr7.3:9986861-9986880 | MS.gene007238:intron | 40.0% |
| !!! | TTCTTATACCGATTTTGCCC+CGG | - | chr7.3:9986665-9986684 | MS.gene007238:intron | 40.0% |
| AACTAGACTACGGAGTAACC+AGG | + | chr7.3:9986997-9987016 | None:intergenic | 45.0% | |
| AACTGGTCGGATCAATCAGT+TGG | - | chr7.3:9986964-9986983 | MS.gene007238:intron | 45.0% | |
| AATGGCTCTTTGTGGACAAC+TGG | + | chr7.3:9986540-9986559 | None:intergenic | 45.0% | |
| ACTAGACTACGGAGTAACCA+GGG | + | chr7.3:9986996-9987015 | None:intergenic | 45.0% | |
| AGCCGGAGATATCACTATTC+AGG | - | chr7.3:9987402-9987421 | MS.gene007238:intron | 45.0% | |
| AGGTGGAGAAGACAACAACA+TGG | - | chr7.3:9984339-9984358 | MS.gene007238:CDS | 45.0% | |
| AGTAGACTGTATTAGGCCTG+AGG | + | chr7.3:9985941-9985960 | None:intergenic | 45.0% | |
| ATATCTCCGGCTTAGGATCT+TGG | + | chr7.3:9987394-9987413 | None:intergenic | 45.0% | |
| ATGCTGTGAATGGCTCTTTG+TGG | + | chr7.3:9986548-9986567 | None:intergenic | 45.0% | |
| CAATCAGTTGGATTTGACCC+TGG | - | chr7.3:9986976-9986995 | MS.gene007238:intron | 45.0% | |
| CATATTACCATTGGGGATGG+AGG | - | chr7.3:9987187-9987206 | MS.gene007238:intron | 45.0% | |
| CCAGCACTTCAACTAGACTA+CGG | + | chr7.3:9987007-9987026 | None:intergenic | 45.0% | |
| GAGATCTTGGACAAACAGAG+TGG | - | chr7.3:9986334-9986353 | MS.gene007238:intron | 45.0% | |
| GATGAGTCATCAAGATCGTG+AGG | + | chr7.3:9984114-9984133 | None:intergenic | 45.0% | |
| GCCGGAGATATCACTATTCA+GGG | - | chr7.3:9987403-9987422 | MS.gene007238:intron | 45.0% | |
| GCTTCAAGGGGATTTACAGA+AGG | - | chr7.3:9986707-9986726 | MS.gene007238:intron | 45.0% | |
| GGAGATATCACTATTCAGGG+AGG | - | chr7.3:9987406-9987425 | MS.gene007238:intron | 45.0% | |
| GGCAGTTAAGAATGGGAAGT+GGG | - | chr7.3:9984403-9984422 | MS.gene007238:CDS | 45.0% | |
| GGTCCAGTGCATATTACCAT+TGG | - | chr7.3:9987178-9987197 | MS.gene007238:intron | 45.0% | |
| GTAGACTGTATTAGGCCTGA+GGG | + | chr7.3:9985940-9985959 | None:intergenic | 45.0% | |
| GTGCATATTACCATTGGGGA+TGG | - | chr7.3:9987184-9987203 | MS.gene007238:intron | 45.0% | |
| TAATGAAGCTCATCAGGGTG+AGG | - | chr7.3:9986788-9986807 | MS.gene007238:intron | 45.0% | |
| TAGACTGTATTAGGCCTGAG+GGG | + | chr7.3:9985939-9985958 | None:intergenic | 45.0% | |
| TAGGTACCAAGATCCTAAGC+CGG | - | chr7.3:9987385-9987404 | MS.gene007238:intron | 45.0% | |
| TATTGTTGGGGTCGGTGAAT+AGG | - | chr7.3:9984319-9984338 | MS.gene007238:intron | 45.0% | |
| TCACAGCATACAATGCAAGG+TGG | - | chr7.3:9986559-9986578 | MS.gene007238:intron | 45.0% | |
| TCCCCAATGGTAATATGCAC+TGG | + | chr7.3:9987184-9987203 | None:intergenic | 45.0% | |
| TGAAGAATCCGGGGCAAAAT+CGG | + | chr7.3:9986676-9986695 | None:intergenic | 45.0% | |
| TGGCAGTTAAGAATGGGAAG+TGG | - | chr7.3:9984402-9984421 | MS.gene007238:CDS | 45.0% | |
| TGGTTCAACCAAACGACCAA+AGG | + | chr7.3:9986460-9986479 | None:intergenic | 45.0% | |
| TTTCCTGTAGTGACCATCCA+TGG | + | chr7.3:9986498-9986517 | None:intergenic | 45.0% | |
| ! | CTTTGGACATGGAGTACTAG+AGG | - | chr7.3:9987433-9987452 | MS.gene007238:CDS | 45.0% |
| ! | TCACATGCGTTGATGTTACG+TGG | - | chr7.3:9984285-9984304 | MS.gene007238:intron | 45.0% |
| !! | AAAATGGTTTTACGAGGCGG+TGG | + | chr7.3:9984087-9984106 | None:intergenic | 45.0% |
| !! | CATCACATGCACTTTGGAGT+TGG | - | chr7.3:9987465-9987484 | MS.gene007238:CDS | 45.0% |
| ATGGGACTCCTTTGGTCGTT+TGG | - | chr7.3:9986449-9986468 | MS.gene007238:intron | 50.0% | |
| ATGTCGTAATTGGTCCCCTC+AGG | - | chr7.3:9985922-9985941 | MS.gene007238:intron | 50.0% | |
| CATATGCAAGCCAACGTCCA+TGG | - | chr7.3:9986478-9986497 | MS.gene007238:intron | 50.0% | |
| CCGTAGTCTAGTTGAAGTGC+TGG | - | chr7.3:9987004-9987023 | MS.gene007238:intron | 50.0% | |
| GCAAACGCACTTTCTGCTAC+TGG | - | chr7.3:9985849-9985868 | MS.gene007238:intron | 50.0% | |
| GGGAAAAACTCCTTGGGTAG+TGG | - | chr7.3:9986737-9986756 | MS.gene007238:intron | 50.0% | |
| TAGTGACCATCCATGGACGT+TGG | + | chr7.3:9986491-9986510 | None:intergenic | 50.0% | |
| TCGCGAAGTAGTCAACTACC+TGG | + | chr7.3:9985588-9985607 | None:intergenic | 50.0% | |
| TCTGCGTAGGATAAGTCTCC+TGG | + | chr7.3:9986414-9986433 | None:intergenic | 50.0% | |
| TGAACCAACACCACTACCCA+AGG | + | chr7.3:9986750-9986769 | None:intergenic | 50.0% | |
| TGATGACTCATCGCCACAAC+AGG | - | chr7.3:9984122-9984141 | MS.gene007238:CDS | 50.0% | |
| TGCTCTTAGGACACCTGTGA+AGG | - | chr7.3:9984909-9984928 | MS.gene007238:CDS | 50.0% | |
| ! | AACTCCTTGGGTAGTGGTGT+TGG | - | chr7.3:9986743-9986762 | MS.gene007238:intron | 50.0% |
| ! | AGTGCGTTTGCTGAAGGAGA+TGG | + | chr7.3:9985840-9985859 | None:intergenic | 50.0% |
| ! | GCAGAAAGTGCGTTTGCTGA+AGG | + | chr7.3:9985846-9985865 | None:intergenic | 50.0% |
| ! | GGGAACACATTTTCCAGGCT+TGG | - | chr7.3:9984008-9984027 | MS.gene007238:CDS | 50.0% |
| ! | GTGCGTTTGCTGAAGGAGAT+GGG | + | chr7.3:9985839-9985858 | None:intergenic | 50.0% |
| ! | TGGACATGGAGTACTAGAGG+TGG | - | chr7.3:9987436-9987455 | MS.gene007238:CDS | 50.0% |
| !! | CATGGACGTTGGCTTGCATA+TGG | + | chr7.3:9986480-9986499 | None:intergenic | 50.0% |
| !! | CTATTCAGGGAGGCTAGCTT+TGG | - | chr7.3:9987416-9987435 | MS.gene007238:intron | 50.0% |
| !! | TGGTGTTGGTTCATGCTCCT+TGG | - | chr7.3:9986757-9986776 | MS.gene007238:intron | 50.0% |
| ACGATTGCCTCCATCCCCAA+TGG | + | chr7.3:9987197-9987216 | None:intergenic | 55.0% | |
| AGCTTTACAAGCGGGGTCAG+AGG | + | chr7.3:9987549-9987568 | None:intergenic | 55.0% | |
| ATCGTGAAGGCCTAGCCACA+AGG | - | chr7.3:9987212-9987231 | MS.gene007238:intron | 55.0% | |
| CGTCCATGGATGGTCACTAC+AGG | - | chr7.3:9986492-9986511 | MS.gene007238:intron | 55.0% | |
| GGGCCGTAATGTACTGTTGC+TGG | + | chr7.3:9985819-9985838 | None:intergenic | 55.0% | |
| TACAAGCGGGGTCAGAGGAA+AGG | + | chr7.3:9987544-9987563 | None:intergenic | 55.0% | |
| TGCAAGCCAACGTCCATGGA+TGG | - | chr7.3:9986482-9986501 | MS.gene007238:intron | 55.0% | |
| TGTTGGGGTCGGTGAATAGG+TGG | - | chr7.3:9984322-9984341 | MS.gene007238:intron | 55.0% | |
| !! | AGGGAGGCTAGCTTTGGACA+TGG | - | chr7.3:9987422-9987441 | MS.gene007238:intron | 55.0% |
| GGGGATGGAGGCAATCGTGA+AGG | - | chr7.3:9987199-9987218 | MS.gene007238:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 9983997 | 9987571 | 9983997 | ID=MS.gene007238 |
| chr7.3 | mRNA | 9983997 | 9987571 | 9983997 | ID=MS.gene007238.t1;Parent=MS.gene007238 |
| chr7.3 | exon | 9987425 | 9987571 | 9987425 | ID=MS.gene007238.t1.exon1;Parent=MS.gene007238.t1 |
| chr7.3 | CDS | 9987425 | 9987571 | 9987425 | ID=cds.MS.gene007238.t1;Parent=MS.gene007238.t1 |
| chr7.3 | exon | 9985527 | 9985815 | 9985527 | ID=MS.gene007238.t1.exon2;Parent=MS.gene007238.t1 |
| chr7.3 | CDS | 9985527 | 9985815 | 9985527 | ID=cds.MS.gene007238.t1;Parent=MS.gene007238.t1 |
| chr7.3 | exon | 9984660 | 9985234 | 9984660 | ID=MS.gene007238.t1.exon3;Parent=MS.gene007238.t1 |
| chr7.3 | CDS | 9984660 | 9985234 | 9984660 | ID=cds.MS.gene007238.t1;Parent=MS.gene007238.t1 |
| chr7.3 | exon | 9984335 | 9984423 | 9984335 | ID=MS.gene007238.t1.exon4;Parent=MS.gene007238.t1 |
| chr7.3 | CDS | 9984335 | 9984423 | 9984335 | ID=cds.MS.gene007238.t1;Parent=MS.gene007238.t1 |
| chr7.3 | exon | 9983997 | 9984180 | 9983997 | ID=MS.gene007238.t1.exon5;Parent=MS.gene007238.t1 |
| chr7.3 | CDS | 9983997 | 9984180 | 9983997 | ID=cds.MS.gene007238.t1;Parent=MS.gene007238.t1 |
| Gene Sequence |
| Protein sequence |
