Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24675.t1 | XP_003625798.2 | 95.8 | 427 | 18 | 0 | 1 | 427 | 1 | 427 | 5.20E-252 | 879.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24675.t1 | Q9LXI7 | 63.5 | 422 | 148 | 5 | 10 | 426 | 6 | 426 | 3.6e-161 | 569.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24675.t1 | G7L619 | 95.8 | 427 | 18 | 0 | 1 | 427 | 1 | 427 | 3.7e-252 | 879.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene82712 | MS.gene24675 | PPI |
| MS.gene24675 | MS.gene027118 | PPI |
| MS.gene94360 | MS.gene24675 | PPI |
| MS.gene30156 | MS.gene24675 | PPI |
| MS.gene30151 | MS.gene24675 | PPI |
| MS.gene24675 | MS.gene85567 | PPI |
| MS.gene24675 | MS.gene82708 | PPI |
| MS.gene94357 | MS.gene24675 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24675.t1 | MTR_7g104360 | 95.785 | 427 | 18 | 0 | 1 | 427 | 1 | 427 | 0.0 | 860 |
| MS.gene24675.t1 | MTR_7g104330 | 61.000 | 400 | 153 | 2 | 27 | 425 | 34 | 431 | 0.0 | 535 |
| MS.gene24675.t1 | MTR_1g060360 | 59.615 | 416 | 165 | 2 | 11 | 425 | 10 | 423 | 0.0 | 532 |
| MS.gene24675.t1 | MTR_3g051240 | 61.519 | 395 | 147 | 4 | 27 | 419 | 22 | 413 | 5.29e-178 | 504 |
| MS.gene24675.t1 | MTR_5g092360 | 60.652 | 399 | 150 | 4 | 27 | 421 | 26 | 421 | 1.04e-172 | 491 |
| MS.gene24675.t1 | MTR_4g115670 | 42.233 | 412 | 209 | 9 | 30 | 416 | 40 | 447 | 5.19e-100 | 306 |
| MS.gene24675.t1 | MTR_0188s0020 | 41.274 | 424 | 212 | 12 | 34 | 423 | 41 | 461 | 9.97e-96 | 295 |
| MS.gene24675.t1 | MTR_4g037105 | 40.431 | 418 | 212 | 11 | 33 | 416 | 34 | 448 | 4.85e-90 | 280 |
| MS.gene24675.t1 | MTR_3g083810 | 37.131 | 474 | 205 | 10 | 32 | 416 | 56 | 525 | 5.51e-88 | 278 |
| MS.gene24675.t1 | MTR_6g013050 | 36.304 | 460 | 199 | 10 | 47 | 416 | 71 | 526 | 2.77e-87 | 277 |
| MS.gene24675.t1 | MTR_1g112630 | 40.000 | 400 | 209 | 11 | 45 | 416 | 54 | 450 | 3.88e-87 | 273 |
| MS.gene24675.t1 | MTR_3g083820 | 36.498 | 474 | 208 | 10 | 32 | 416 | 56 | 525 | 1.16e-86 | 274 |
| MS.gene24675.t1 | MTR_7g056403 | 38.860 | 386 | 164 | 6 | 99 | 416 | 143 | 524 | 1.18e-84 | 269 |
| MS.gene24675.t1 | MTR_6g013050 | 35.945 | 434 | 184 | 9 | 47 | 391 | 71 | 499 | 5.55e-78 | 251 |
| MS.gene24675.t1 | MTR_4g037670 | 27.363 | 402 | 216 | 12 | 47 | 385 | 216 | 604 | 1.44e-33 | 133 |
| MS.gene24675.t1 | MTR_1g052505 | 26.558 | 369 | 215 | 9 | 47 | 359 | 194 | 562 | 7.95e-33 | 130 |
| MS.gene24675.t1 | MTR_4g082930 | 27.778 | 414 | 219 | 13 | 47 | 385 | 144 | 552 | 1.76e-30 | 124 |
| MS.gene24675.t1 | MTR_4g082940 | 27.750 | 400 | 223 | 13 | 47 | 385 | 144 | 538 | 7.48e-30 | 122 |
| MS.gene24675.t1 | MTR_3g074930 | 25.854 | 410 | 239 | 13 | 55 | 405 | 196 | 599 | 1.24e-29 | 121 |
| MS.gene24675.t1 | MTR_3g074930 | 25.553 | 407 | 238 | 13 | 58 | 405 | 192 | 592 | 6.13e-29 | 119 |
| MS.gene24675.t1 | MTR_4g103520 | 25.980 | 408 | 235 | 13 | 58 | 405 | 119 | 519 | 1.25e-26 | 112 |
| MS.gene24675.t1 | MTR_4g103520 | 25.980 | 408 | 235 | 13 | 58 | 405 | 196 | 596 | 1.34e-26 | 112 |
| MS.gene24675.t1 | MTR_5g045600 | 24.760 | 416 | 230 | 13 | 58 | 405 | 188 | 588 | 1.21e-24 | 107 |
| MS.gene24675.t1 | MTR_3g074970 | 25.377 | 398 | 205 | 12 | 58 | 405 | 141 | 496 | 2.21e-24 | 105 |
| MS.gene24675.t1 | MTR_8g063080 | 25.141 | 354 | 209 | 11 | 102 | 407 | 238 | 583 | 1.30e-21 | 97.8 |
| MS.gene24675.t1 | MTR_5g092450 | 49.351 | 77 | 19 | 1 | 315 | 391 | 11 | 67 | 3.65e-15 | 70.9 |
| MS.gene24675.t1 | MTR_5g092300 | 50.000 | 54 | 27 | 0 | 368 | 421 | 9 | 62 | 1.43e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24675.t1 | AT3G52780 | 63.507 | 422 | 148 | 5 | 10 | 426 | 6 | 426 | 0.0 | 557 |
| MS.gene24675.t1 | AT3G52820 | 61.323 | 393 | 149 | 2 | 28 | 419 | 28 | 418 | 2.33e-180 | 510 |
| MS.gene24675.t1 | AT3G20500 | 57.210 | 423 | 170 | 5 | 12 | 426 | 5 | 424 | 3.37e-174 | 494 |
| MS.gene24675.t1 | AT3G52810 | 53.052 | 426 | 189 | 3 | 11 | 427 | 7 | 430 | 1.18e-161 | 462 |
| MS.gene24675.t1 | AT3G52780 | 61.677 | 334 | 122 | 5 | 10 | 338 | 6 | 338 | 1.91e-148 | 426 |
| MS.gene24675.t1 | AT5G34850 | 40.967 | 393 | 205 | 8 | 45 | 412 | 52 | 442 | 9.16e-95 | 293 |
| MS.gene24675.t1 | AT3G07130 | 40.992 | 383 | 157 | 6 | 99 | 416 | 137 | 515 | 1.27e-88 | 279 |
| MS.gene24675.t1 | AT1G56360 | 39.604 | 404 | 209 | 11 | 45 | 416 | 48 | 448 | 5.08e-88 | 275 |
| MS.gene24675.t1 | AT2G27190 | 38.776 | 441 | 229 | 12 | 11 | 416 | 19 | 453 | 7.96e-88 | 275 |
| MS.gene24675.t1 | AT4G36350 | 39.120 | 409 | 215 | 11 | 39 | 416 | 43 | 448 | 2.70e-86 | 271 |
| MS.gene24675.t1 | AT2G16430 | 35.745 | 470 | 254 | 14 | 2 | 427 | 3 | 468 | 3.26e-84 | 266 |
| MS.gene24675.t1 | AT3G07130 | 37.740 | 416 | 157 | 7 | 99 | 416 | 137 | 548 | 8.23e-82 | 262 |
| MS.gene24675.t1 | AT2G18130 | 37.722 | 395 | 206 | 8 | 45 | 416 | 52 | 429 | 1.23e-81 | 258 |
| MS.gene24675.t1 | AT4G13700 | 38.727 | 377 | 174 | 7 | 47 | 370 | 65 | 437 | 2.34e-78 | 250 |
| MS.gene24675.t1 | AT2G16430 | 38.372 | 344 | 182 | 8 | 112 | 427 | 7 | 348 | 5.20e-74 | 235 |
| MS.gene24675.t1 | AT2G32770 | 37.692 | 390 | 166 | 6 | 99 | 414 | 146 | 532 | 4.47e-72 | 236 |
| MS.gene24675.t1 | AT2G32770 | 37.705 | 366 | 151 | 6 | 99 | 390 | 65 | 427 | 3.36e-65 | 215 |
| MS.gene24675.t1 | AT4G13700 | 36.471 | 340 | 159 | 7 | 47 | 333 | 65 | 400 | 2.20e-61 | 204 |
| MS.gene24675.t1 | AT3G46120 | 35.000 | 400 | 157 | 13 | 45 | 416 | 52 | 376 | 6.16e-60 | 200 |
| MS.gene24675.t1 | AT2G32770 | 33.590 | 390 | 153 | 7 | 99 | 414 | 146 | 503 | 1.66e-56 | 194 |
| MS.gene24675.t1 | AT1G52940 | 36.245 | 229 | 130 | 6 | 45 | 257 | 13 | 241 | 1.60e-35 | 131 |
| MS.gene24675.t1 | AT2G03450 | 26.852 | 432 | 241 | 13 | 47 | 407 | 143 | 570 | 5.44e-32 | 129 |
| MS.gene24675.t1 | AT1G13900 | 27.361 | 413 | 224 | 11 | 47 | 388 | 145 | 552 | 3.28e-31 | 126 |
| MS.gene24675.t1 | AT5G50400 | 25.568 | 352 | 206 | 9 | 102 | 405 | 165 | 508 | 6.33e-25 | 107 |
| MS.gene24675.t1 | AT5G50400 | 25.568 | 352 | 206 | 9 | 102 | 405 | 237 | 580 | 7.36e-25 | 107 |
| MS.gene24675.t1 | AT1G13750 | 25.369 | 406 | 240 | 13 | 58 | 405 | 182 | 582 | 6.33e-22 | 99.0 |
| MS.gene24675.t1 | AT4G24890 | 24.857 | 350 | 207 | 9 | 102 | 403 | 241 | 582 | 1.31e-21 | 97.8 |
Find 116 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGCTTGGCTTTCTTGATTT+TGG | 0.113918 | 7.3:-9962703 | MS.gene24675:CDS |
| CGGATTCTTCACAATATAAA+TGG | 0.234250 | 7.3:-9960041 | MS.gene24675:CDS |
| GAAATTCACAATGTCGTAAT+TGG | 0.266816 | 7.3:-9960814 | MS.gene24675:CDS |
| GCTCAATTTCCTATCAAGTT+TGG | 0.270262 | 7.3:-9960715 | MS.gene24675:CDS |
| GTTTCAACATTGAAGCATTT+AGG | 0.285278 | 7.3:-9960366 | MS.gene24675:CDS |
| AGCCGGAGATATCACTATTC+AGG | 0.296214 | 7.3:-9959324 | MS.gene24675:CDS |
| CGGTAGTAGTAGACTGTATT+AGG | 0.306177 | 7.3:+9960781 | None:intergenic |
| GGGATTTACAGAAGGTTAAC+AGG | 0.315844 | 7.3:-9960011 | MS.gene24675:CDS |
| ATGGGACTCCTTTGGTCGTT+TGG | 0.324190 | 7.3:-9960277 | MS.gene24675:CDS |
| ACACGGGTTTATAAAGATAA+AGG | 0.345618 | 7.3:-9959581 | MS.gene24675:CDS |
| CCTATCAAGTTTGGAGTAGT+TGG | 0.351322 | 7.3:-9960706 | MS.gene24675:intron |
| CATTATGCTCTTTACGAGTC+TGG | 0.351625 | 7.3:-9960838 | MS.gene24675:CDS |
| GGCGTTCATGTTATCATGTT+GGG | 0.362060 | 7.3:-9960084 | MS.gene24675:CDS |
| TTAAAATGTGCAGGAGATCT+TGG | 0.371273 | 7.3:-9960405 | MS.gene24675:intron |
| CCAACTACTCCAAACTTGAT+AGG | 0.374281 | 7.3:+9960706 | None:intergenic |
| TAATGTACTGTTGCTGGAGT+TGG | 0.378392 | 7.3:+9960916 | None:intergenic |
| TAATTCTAATGAAGCTCATC+AGG | 0.380523 | 7.3:-9959944 | MS.gene24675:CDS |
| CAAAATTTATGGGACTCCTT+TGG | 0.387876 | 7.3:-9960285 | MS.gene24675:CDS |
| CTATTCAGGGAGGCTAGCTT+TGG | 0.390382 | 7.3:-9959310 | MS.gene24675:CDS |
| TACAGTCTACTACTACCGTT+TGG | 0.396619 | 7.3:-9960776 | MS.gene24675:CDS |
| ATATCTCCGGCTTAGGATCT+TGG | 0.405801 | 7.3:+9959335 | None:intergenic |
| TCACAATATAAATGGCTTCA+AGG | 0.411262 | 7.3:-9960033 | MS.gene24675:CDS |
| TCTGATCCACTTTCTTCAAA+TGG | 0.413507 | 7.3:+9960138 | None:intergenic |
| CATTTATATTGTGAAGAATC+CGG | 0.413645 | 7.3:+9960042 | None:intergenic |
| AATGGCTCTTTGTGGACAAC+TGG | 0.417454 | 7.3:+9960189 | None:intergenic |
| TGAAGAATCCGGGGCAAAAT+CGG | 0.417615 | 7.3:+9960053 | None:intergenic |
| CATGGACGTTGGCTTGCATA+TGG | 0.419335 | 7.3:+9960249 | None:intergenic |
| GTCCAGTGCATATTACCATT+GGG | 0.419767 | 7.3:-9959547 | MS.gene24675:CDS |
| CTGTTGTTAGTGACTCTGTT+TGG | 0.424993 | 7.3:-9959216 | MS.gene24675:CDS |
| CACAATATAAATGGCTTCAA+GGG | 0.433408 | 7.3:-9960032 | MS.gene24675:CDS |
| GCAAACGCACTTTCTGCTAC+TGG | 0.439584 | 7.3:-9960877 | MS.gene24675:CDS |
| ATGCTGTGAATGGCTCTTTG+TGG | 0.445955 | 7.3:+9960181 | None:intergenic |
| AGAAAACAAAATGAGATTGA+AGG | 0.450243 | 7.3:-9962739 | None:intergenic |
| GGGCCGTAATGTACTGTTGC+TGG | 0.451978 | 7.3:+9960910 | None:intergenic |
| AAGTTATTCTCATCTTGTCT+TGG | 0.452713 | 7.3:+9960953 | None:intergenic |
| TGATGACTCATCGCCACAAC+AGG | 0.452995 | 7.3:-9962604 | MS.gene24675:intron |
| CTGGAATCTTCTCAATATCA+TGG | 0.462576 | 7.3:+9960208 | None:intergenic |
| AATGTACTGTTGCTGGAGTT+GGG | 0.467070 | 7.3:+9960917 | None:intergenic |
| TTATTTATTACCTTGTGGCT+AGG | 0.467832 | 7.3:+9959504 | None:intergenic |
| TGGTGTTGGTTCATGCTCCT+TGG | 0.467959 | 7.3:-9959969 | MS.gene24675:CDS |
| ACACATCAAAAGAATAGTAT+AGG | 0.472739 | 7.3:+9960109 | None:intergenic |
| AACTCCTTGGGTAGTGGTGT+TGG | 0.478876 | 7.3:-9959983 | MS.gene24675:CDS |
| TGGCGTTCATGTTATCATGT+TGG | 0.483228 | 7.3:-9960085 | MS.gene24675:CDS |
| TCCCCAATGGTAATATGCAC+TGG | 0.487432 | 7.3:+9959545 | None:intergenic |
| AATAGTGATATCTCCGGCTT+AGG | 0.487856 | 7.3:+9959328 | None:intergenic |
| ATTTATATTGTGAAGAATCC+GGG | 0.492291 | 7.3:+9960043 | None:intergenic |
| AGTGCGTTTGCTGAAGGAGA+TGG | 0.500114 | 7.3:+9960889 | None:intergenic |
| TGGTCGATTGTAGCAATAAA+CGG | 0.502539 | 7.3:+9962662 | None:intergenic |
| CAGACTCGTAAAGAGCATAA+TGG | 0.503425 | 7.3:+9960839 | None:intergenic |
| GGTCCAGTGCATATTACCAT+TGG | 0.503837 | 7.3:-9959548 | MS.gene24675:CDS |
| CAAACAGAGTCACTAACAAC+AGG | 0.504537 | 7.3:+9959217 | None:intergenic |
| AAAATCAAGAAAGCCAAGCC+TGG | 0.505701 | 7.3:+9962705 | None:intergenic |
| GCCGGAGATATCACTATTCA+GGG | 0.507404 | 7.3:-9959323 | MS.gene24675:CDS |
| ACAGTCTACTACTACCGTTT+GGG | 0.511791 | 7.3:-9960775 | MS.gene24675:CDS |
| CATCACATGCACTTTGGAGT+TGG | 0.513462 | 7.3:-9959261 | MS.gene24675:CDS |
| CTTGCATTGTATGCTGTGAA+TGG | 0.517458 | 7.3:+9960171 | None:intergenic |
| CATATGCAAGCCAACGTCCA+TGG | 0.524535 | 7.3:-9960248 | MS.gene24675:CDS |
| GAAAACAAAATGAGATTGAA+GGG | 0.525206 | 7.3:-9962738 | None:intergenic |
| TTATATCAAGCTTTACAAGC+GGG | 0.525253 | 7.3:+9959172 | None:intergenic |
| ATGTCGTAATTGGTCCCCTC+AGG | 0.528114 | 7.3:-9960804 | MS.gene24675:CDS |
| TCTGCGTAGGATAAGTCTCC+TGG | 0.542667 | 7.3:+9960315 | None:intergenic |
| TACAAGCGGGGTCAGAGGAA+AGG | 0.545501 | 7.3:+9959185 | None:intergenic |
| CAAATGCCATTTGAAGAAAG+TGG | 0.549954 | 7.3:-9960144 | MS.gene24675:CDS |
| TTAACGCATCACATGCACTT+TGG | 0.554229 | 7.3:-9959267 | MS.gene24675:CDS |
| GTGCGTTTGCTGAAGGAGAT+GGG | 0.554869 | 7.3:+9960890 | None:intergenic |
| CGTCCATGGATGGTCACTAC+AGG | 0.563495 | 7.3:-9960234 | MS.gene24675:CDS |
| GCAGAAAGTGCGTTTGCTGA+AGG | 0.564712 | 7.3:+9960883 | None:intergenic |
| AGCATAATGGTAAGAAGTGG+TGG | 0.564797 | 7.3:+9960852 | None:intergenic |
| AAAGATAAAGGTGACAATTG+TGG | 0.564863 | 7.3:-9959569 | MS.gene24675:CDS |
| GCTTCAAGGGGATTTACAGA+AGG | 0.567207 | 7.3:-9960019 | MS.gene24675:CDS |
| AAGACAAGATGAGAATAACT+TGG | 0.568409 | 7.3:-9960951 | MS.gene24675:CDS |
| TTTCCTGTAGTGACCATCCA+TGG | 0.568592 | 7.3:+9960231 | None:intergenic |
| CATATTACCATTGGGGATGG+AGG | 0.568634 | 7.3:-9959539 | MS.gene24675:CDS |
| GTGCATATTACCATTGGGGA+TGG | 0.568742 | 7.3:-9959542 | MS.gene24675:CDS |
| TTGGCATAAGAATGATAATG+AGG | 0.569656 | 7.3:-9959242 | MS.gene24675:CDS |
| AGCTTTACAAGCGGGGTCAG+AGG | 0.579456 | 7.3:+9959180 | None:intergenic |
| ACTCCAGCAACAGTACATTA+CGG | 0.579797 | 7.3:-9960913 | MS.gene24675:CDS |
| TGCAAGCCAACGTCCATGGA+TGG | 0.582098 | 7.3:-9960244 | MS.gene24675:CDS |
| TACGATATGCTATTATTACC+AGG | 0.585952 | 7.3:-9960333 | MS.gene24675:CDS |
| TAATGAAGCTCATCAGGGTG+AGG | 0.588950 | 7.3:-9959938 | MS.gene24675:CDS |
| GTAGGTACATATATCTCAAG+TGG | 0.589069 | 7.3:-9960977 | MS.gene24675:intron |
| AATACTTACAAAGCGTTCGT+AGG | 0.596937 | 7.3:+9959831 | None:intergenic |
| ACAATATAAATGGCTTCAAG+GGG | 0.601935 | 7.3:-9960031 | MS.gene24675:CDS |
| TATATCAAGCTTTACAAGCG+GGG | 0.605982 | 7.3:+9959173 | None:intergenic |
| AGGGAGGCTAGCTTTGGACA+TGG | 0.606219 | 7.3:-9959304 | MS.gene24675:CDS |
| CATTCACAGCATACAATGCA+AGG | 0.607221 | 7.3:-9960170 | MS.gene24675:CDS |
| TCCCTGAATAGTGATATCTC+CGG | 0.607511 | 7.3:+9959322 | None:intergenic |
| TGGTTCAACCAAACGACCAA+AGG | 0.610386 | 7.3:+9960269 | None:intergenic |
| ACGATTGCCTCCATCCCCAA+TGG | 0.611597 | 7.3:+9959532 | None:intergenic |
| CTTTGGACATGGAGTACTAG+AGG | 0.617779 | 7.3:-9959293 | MS.gene24675:CDS |
| ATTATATCAAGCTTTACAAG+CGG | 0.619234 | 7.3:+9959171 | None:intergenic |
| AGTAGACTGTATTAGGCCTG+AGG | 0.623439 | 7.3:+9960788 | None:intergenic |
| TGTTGACATGAAGAATGCAA+TGG | 0.623954 | 7.3:-9959908 | MS.gene24675:CDS |
| GTAGACTGTATTAGGCCTGA+GGG | 0.626445 | 7.3:+9960789 | None:intergenic |
| AACTTGATAGGAAATTGAGC+TGG | 0.627265 | 7.3:+9960718 | None:intergenic |
| ATCGTGAAGGCCTAGCCACA+AGG | 0.627603 | 7.3:-9959514 | MS.gene24675:intron |
| GGGGATGGAGGCAATCGTGA+AGG | 0.629344 | 7.3:-9959527 | MS.gene24675:CDS |
| TGAACCAACACCACTACCCA+AGG | 0.629873 | 7.3:+9959979 | None:intergenic |
| GGATTTACAGAAGGTTAACA+GGG | 0.636624 | 7.3:-9960010 | MS.gene24675:CDS |
| TAGGTACCAAGATCCTAAGC+CGG | 0.637082 | 7.3:-9959341 | MS.gene24675:CDS |
| AAGAGCATAATGGTAAGAAG+TGG | 0.638792 | 7.3:+9960849 | None:intergenic |
| TAGGTACATATATCTCAAGT+GGG | 0.638879 | 7.3:-9960976 | MS.gene24675:CDS |
| GATGAGTCATCAAGATCGTG+AGG | 0.640370 | 7.3:+9962615 | None:intergenic |
| TCCAGTGCATATTACCATTG+GGG | 0.646566 | 7.3:-9959546 | MS.gene24675:CDS |
| GACATGAAGAATGCAATGGA+AGG | 0.648913 | 7.3:-9959904 | MS.gene24675:CDS |
| TTTATATTGTGAAGAATCCG+GGG | 0.656506 | 7.3:+9960044 | None:intergenic |
| AATTCTAATGAAGCTCATCA+GGG | 0.664651 | 7.3:-9959943 | MS.gene24675:CDS |
| TGGACATGGAGTACTAGAGG+TGG | 0.683228 | 7.3:-9959290 | MS.gene24675:CDS |
| GAGATCTTGGACAAACAGAG+TGG | 0.690863 | 7.3:-9960392 | MS.gene24675:CDS |
| ATGAGTCATCAAGATCGTGA+GGG | 0.692801 | 7.3:+9962616 | None:intergenic |
| GCTTCATTAGAATTATACCA+AGG | 0.697694 | 7.3:+9959952 | None:intergenic |
| TAGTGACCATCCATGGACGT+TGG | 0.702416 | 7.3:+9960238 | None:intergenic |
| TAGACTGTATTAGGCCTGAG+GGG | 0.723441 | 7.3:+9960790 | None:intergenic |
| GGAGATATCACTATTCAGGG+AGG | 0.752640 | 7.3:-9959320 | MS.gene24675:CDS |
| TCACAGCATACAATGCAAGG+TGG | 0.758498 | 7.3:-9960167 | MS.gene24675:CDS |
| GATTTACAGAAGGTTAACAG+GGG | 0.767404 | 7.3:-9960009 | MS.gene24675:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAAAAGAATAATTACT+AGG | + | chr7.3:9962298-9962317 | None:intergenic | 10.0% |
| !! | TTCATTTAAAAAAAAAAACA+AGG | - | chr7.3:9960029-9960048 | MS.gene24675:CDS | 10.0% |
| !!! | GTAATTTTTTTTATTTAGTT+TGG | + | chr7.3:9959864-9959883 | None:intergenic | 10.0% |
| !! | AAATGAAAATAATAATAGTG+TGG | + | chr7.3:9961250-9961269 | None:intergenic | 15.0% |
| !! | AGTAAAAATTAAGAAAGTTT+AGG | + | chr7.3:9962448-9962467 | None:intergenic | 15.0% |
| !! | ATAAAATAACGAATGTATAT+GGG | + | chr7.3:9960408-9960427 | None:intergenic | 15.0% |
| !! | TATAAAATAACGAATGTATA+TGG | + | chr7.3:9960409-9960428 | None:intergenic | 15.0% |
| !! | TGTTTATTTATTTGTCATAT+AGG | - | chr7.3:9962229-9962248 | MS.gene24675:intron | 15.0% |
| !! | TTATGTTACAATATTGAAAA+AGG | + | chr7.3:9960259-9960278 | None:intergenic | 15.0% |
| !! | TTTATTTATTTATTACCTTG+TGG | + | chr7.3:9962410-9962429 | None:intergenic | 15.0% |
| !!! | AGATTTTGTACAAAATTTAT+GGG | - | chr7.3:9961611-9961630 | MS.gene24675:intron | 15.0% |
| !!! | CAATTTTTTTTTCTTTTATC+TGG | + | chr7.3:9959832-9959851 | None:intergenic | 15.0% |
| !!! | CATAATATATATACTCTTTT+TGG | + | chr7.3:9960466-9960485 | None:intergenic | 15.0% |
| !!! | CTTTATTTTTCATTCAATTT+AGG | + | chr7.3:9960293-9960312 | None:intergenic | 15.0% |
| !!! | TGATTTTAAATAATTGTATG+TGG | - | chr7.3:9962532-9962551 | MS.gene24675:intron | 15.0% |
| !!! | TTTACATATTGTTTTCAATT+TGG | + | chr7.3:9959558-9959577 | None:intergenic | 15.0% |
| !! | AGTATATATATTATGCTCTA+GGG | - | chr7.3:9960471-9960490 | MS.gene24675:intron | 20.0% |
| !! | ATTTACACTAACTAAGAATA+AGG | - | chr7.3:9959973-9959992 | MS.gene24675:CDS | 20.0% |
| !! | CTCTTAAAATTTCATTTACA+TGG | - | chr7.3:9959432-9959451 | MS.gene24675:intron | 20.0% |
| !! | GAAATTACTTGCTTATAATT+TGG | + | chr7.3:9960559-9960578 | None:intergenic | 20.0% |
| !! | GTGATATATTATATTTGGAA+AGG | - | chr7.3:9959790-9959809 | MS.gene24675:intron | 20.0% |
| !!! | AATGTGATATATACTTTTTC+CGG | - | chr7.3:9960348-9960367 | MS.gene24675:CDS | 20.0% |
| !!! | ATTTAAAACAATGAATACCA+TGG | + | chr7.3:9959382-9959401 | None:intergenic | 20.0% |
| !!! | ATTTTTCATTCAATTTAGGA+GGG | + | chr7.3:9960289-9960308 | None:intergenic | 20.0% |
| !!! | CAGATTTTGTACAAAATTTA+TGG | - | chr7.3:9961610-9961629 | MS.gene24675:intron | 20.0% |
| !!! | CTTTTTTATTTTCTTAGACA+CGG | - | chr7.3:9962308-9962327 | MS.gene24675:intron | 20.0% |
| !!! | TATTTTTCATTCAATTTAGG+AGG | + | chr7.3:9960290-9960309 | None:intergenic | 20.0% |
| !!! | TGTTTTCAATTTGGTAATTT+TGG | + | chr7.3:9959549-9959568 | None:intergenic | 20.0% |
| !!! | TTATTTTCATTTGAGAAAAG+TGG | - | chr7.3:9961258-9961277 | MS.gene24675:intron | 20.0% |
| !!! | TTTTTACTTAACATTACCAA+AGG | - | chr7.3:9962460-9962479 | MS.gene24675:intron | 20.0% |
| !!! | TTTTTTATTTTCTTAGACAC+GGG | - | chr7.3:9962309-9962328 | MS.gene24675:intron | 20.0% |
| ! | ACACATCAAAAGAATAGTAT+AGG | + | chr7.3:9961800-9961819 | None:intergenic | 25.0% |
| ! | ACCAGGTGATATATTATATT+TGG | - | chr7.3:9959785-9959804 | MS.gene24675:intron | 25.0% |
| ! | ATCAAGTTATATGTTTGCAT+TGG | - | chr7.3:9960114-9960133 | MS.gene24675:CDS | 25.0% |
| ! | ATTTATATTGTGAAGAATCC+GGG | + | chr7.3:9961866-9961885 | None:intergenic | 25.0% |
| ! | CAATTGTTTATAAATGTGAC+CGG | + | chr7.3:9960370-9960389 | None:intergenic | 25.0% |
| ! | CATTTATATTGTGAAGAATC+CGG | + | chr7.3:9961867-9961886 | None:intergenic | 25.0% |
| ! | CTATCAATTCTTTCATCATA+AGG | + | chr7.3:9960713-9960732 | None:intergenic | 25.0% |
| ! | CTTATGATGAAAGAATTGAT+AGG | - | chr7.3:9960711-9960730 | MS.gene24675:CDS | 25.0% |
| ! | GAGTATATATATTATGCTCT+AGG | - | chr7.3:9960470-9960489 | MS.gene24675:intron | 25.0% |
| ! | TATTTAGATTCAATGCATTC+AGG | + | chr7.3:9961435-9961454 | None:intergenic | 25.0% |
| ! | TCCAAATATAATATATCACC+TGG | + | chr7.3:9959789-9959808 | None:intergenic | 25.0% |
| ! | TTAATTGTATCATAATGACC+AGG | - | chr7.3:9959768-9959787 | MS.gene24675:intron | 25.0% |
| ! | TTATCGTTACTCATACTTAT+AGG | - | chr7.3:9960734-9960753 | MS.gene24675:CDS | 25.0% |
| ! | TTCTCCTTCAAAAAAGAATA+AGG | - | chr7.3:9960001-9960020 | MS.gene24675:CDS | 25.0% |
| ! | TTTCATCATAAGGATTAAAG+AGG | + | chr7.3:9960703-9960722 | None:intergenic | 25.0% |
| !! | AACAAGGTTGAATTTTCAAT+AGG | - | chr7.3:9960045-9960064 | MS.gene24675:CDS | 25.0% |
| !! | ACAAGGTTGAATTTTCAATA+GGG | - | chr7.3:9960046-9960065 | MS.gene24675:CDS | 25.0% |
| !! | AGTAATTTCTTCAATTTGCT+TGG | - | chr7.3:9960570-9960589 | MS.gene24675:intron | 25.0% |
| !! | GCTTATAATTTGGTAATTCT+GGG | + | chr7.3:9960549-9960568 | None:intergenic | 25.0% |
| !! | TGCTTATAATTTGGTAATTC+TGG | + | chr7.3:9960550-9960569 | None:intergenic | 25.0% |
| !!! | AGTAACTGAGTTTTGTTTAA+CGG | - | chr7.3:9959609-9959628 | MS.gene24675:intron | 25.0% |
| !!! | TCAACCTTATTCTTTTTTGA+AGG | + | chr7.3:9960008-9960027 | None:intergenic | 25.0% |
| !!! | TTTTAAAGAAATACCTGTTG+TGG | + | chr7.3:9959318-9959337 | None:intergenic | 25.0% |
| !!! | TTTTAGAAATCGAATCAAAC+TGG | - | chr7.3:9962127-9962146 | MS.gene24675:intron | 25.0% |
| AAAGATAAAGGTGACAATTG+TGG | - | chr7.3:9962337-9962356 | MS.gene24675:intron | 30.0% | |
| AAATAGTGACATTGATGCAT+TGG | + | chr7.3:9960229-9960248 | None:intergenic | 30.0% | |
| AAGACAAGATGAGAATAACT+TGG | - | chr7.3:9960955-9960974 | MS.gene24675:CDS | 30.0% | |
| AAGTTATTCTCATCTTGTCT+TGG | + | chr7.3:9960956-9960975 | None:intergenic | 30.0% | |
| AATGCATCAATGTCACTATT+TGG | - | chr7.3:9960228-9960247 | MS.gene24675:CDS | 30.0% | |
| AATTCTAATGAAGCTCATCA+GGG | - | chr7.3:9961963-9961982 | MS.gene24675:intron | 30.0% | |
| ACAATATAAATGGCTTCAAG+GGG | - | chr7.3:9961875-9961894 | MS.gene24675:intron | 30.0% | |
| ACACGGGTTTATAAAGATAA+AGG | - | chr7.3:9962325-9962344 | MS.gene24675:intron | 30.0% | |
| CACAATATAAATGGCTTCAA+GGG | - | chr7.3:9961874-9961893 | MS.gene24675:intron | 30.0% | |
| CGGATTCTTCACAATATAAA+TGG | - | chr7.3:9961865-9961884 | MS.gene24675:intron | 30.0% | |
| GAAAACAATATGTAAACCGT+TGG | - | chr7.3:9959562-9959581 | MS.gene24675:CDS | 30.0% | |
| GAAATTCACAATGTCGTAAT+TGG | - | chr7.3:9961092-9961111 | MS.gene24675:intron | 30.0% | |
| GCTTCATTAGAATTATACCA+AGG | + | chr7.3:9961957-9961976 | None:intergenic | 30.0% | |
| GGTACTGTACATATATTGTT+GGG | - | chr7.3:9959486-9959505 | MS.gene24675:intron | 30.0% | |
| GTACTGTACATATATTGTTG+GGG | - | chr7.3:9959487-9959506 | MS.gene24675:intron | 30.0% | |
| TAATTCTAATGAAGCTCATC+AGG | - | chr7.3:9961962-9961981 | MS.gene24675:intron | 30.0% | |
| TACGATATGCTATTATTACC+AGG | - | chr7.3:9961573-9961592 | MS.gene24675:intron | 30.0% | |
| TAGGTACATATATCTCAAGT+GGG | - | chr7.3:9960930-9960949 | MS.gene24675:CDS | 30.0% | |
| TATAACTTGATTTCCTTCAC+AGG | + | chr7.3:9960105-9960124 | None:intergenic | 30.0% | |
| TCACAATATAAATGGCTTCA+AGG | - | chr7.3:9961873-9961892 | MS.gene24675:intron | 30.0% | |
| TGAATTGTTCGATCAATATG+TGG | - | chr7.3:9961365-9961384 | MS.gene24675:intron | 30.0% | |
| TGGTACTGTACATATATTGT+TGG | - | chr7.3:9959485-9959504 | MS.gene24675:intron | 30.0% | |
| TTATTTATTACCTTGTGGCT+AGG | + | chr7.3:9962405-9962424 | None:intergenic | 30.0% | |
| TTGAGATATATGTACCTACA+AGG | + | chr7.3:9960928-9960947 | None:intergenic | 30.0% | |
| TTTATATTGTGAAGAATCCG+GGG | + | chr7.3:9961865-9961884 | None:intergenic | 30.0% | |
| ! | ATTTTGTACAAAATCTGCGT+AGG | + | chr7.3:9961607-9961626 | None:intergenic | 30.0% |
| ! | CTTCAATTTGCTTGGAATAA+GGG | - | chr7.3:9960578-9960597 | MS.gene24675:intron | 30.0% |
| ! | GTTTCAACATTGAAGCATTT+AGG | - | chr7.3:9961540-9961559 | MS.gene24675:intron | 30.0% |
| ! | TACTATTCTTTTGATGTGTC+TGG | - | chr7.3:9961801-9961820 | MS.gene24675:intron | 30.0% |
| ! | TCTTCAATTTGCTTGGAATA+AGG | - | chr7.3:9960577-9960596 | MS.gene24675:intron | 30.0% |
| ! | TTGGCATAAGAATGATAATG+AGG | - | chr7.3:9962664-9962683 | MS.gene24675:CDS | 30.0% |
| !! | AATTTGGTAATTCTGGGATT+AGG | + | chr7.3:9960543-9960562 | None:intergenic | 30.0% |
| !! | TTCTTGATTTTGGTATGCTT+AGG | - | chr7.3:9959213-9959232 | MS.gene24675:CDS | 30.0% |
| !!! | GTAACTGAGTTTTGTTTAAC+GGG | - | chr7.3:9959610-9959629 | MS.gene24675:intron | 30.0% |
| AACTTGATAGGAAATTGAGC+TGG | + | chr7.3:9961191-9961210 | None:intergenic | 35.0% | |
| AGAAATCGAATCAAACTGGT+CGG | - | chr7.3:9962131-9962150 | MS.gene24675:intron | 35.0% | |
| CAAAATTTATGGGACTCCTT+TGG | - | chr7.3:9961621-9961640 | MS.gene24675:intron | 35.0% | |
| CTGGAATCTTCTCAATATCA+TGG | + | chr7.3:9961701-9961720 | None:intergenic | 35.0% | |
| GATAACTGAATCAGACTCAA+GGG | + | chr7.3:9960618-9960637 | None:intergenic | 35.0% | |
| GATTTACAGAAGGTTAACAG+GGG | - | chr7.3:9961897-9961916 | MS.gene24675:intron | 35.0% | |
| GCTCAATTTCCTATCAAGTT+TGG | - | chr7.3:9961191-9961210 | MS.gene24675:intron | 35.0% | |
| GGATTTACAGAAGGTTAACA+GGG | - | chr7.3:9961896-9961915 | MS.gene24675:intron | 35.0% | |
| GTAGGTACATATATCTCAAG+TGG | - | chr7.3:9960929-9960948 | MS.gene24675:CDS | 35.0% | |
| TAAACAATTCTGCGCAACTA+AGG | + | chr7.3:9961467-9961486 | None:intergenic | 35.0% | |
| TATGTGCACCGTGATTTAAT+CGG | + | chr7.3:9962270-9962289 | None:intergenic | 35.0% | |
| TCTGATCCACTTTCTTCAAA+TGG | + | chr7.3:9961771-9961790 | None:intergenic | 35.0% | |
| TGCCTATACTTAAAATGTGC+AGG | - | chr7.3:9961492-9961511 | MS.gene24675:intron | 35.0% | |
| TGGATCAAGAACAAAGAATG+TGG | + | chr7.3:9961396-9961415 | None:intergenic | 35.0% | |
| TGGTCGATTGTAGCAATAAA+CGG | + | chr7.3:9959247-9959266 | None:intergenic | 35.0% | |
| TGGTTGAACCGATTAAATCA+CGG | - | chr7.3:9962259-9962278 | MS.gene24675:intron | 35.0% | |
| TGTACATATATTGTTGGGGT+CGG | - | chr7.3:9959491-9959510 | MS.gene24675:intron | 35.0% | |
| TGTTGACATGAAGAATGCAA+TGG | - | chr7.3:9961998-9962017 | MS.gene24675:intron | 35.0% | |
| TTAAAATGTGCAGGAGATCT+TGG | - | chr7.3:9961501-9961520 | MS.gene24675:intron | 35.0% | |
| TTAATCGTATGTATGTGTGC+TGG | - | chr7.3:9959409-9959428 | MS.gene24675:intron | 35.0% | |
| TTCAGTTATCGTAGTGTCTT+TGG | - | chr7.3:9960628-9960647 | MS.gene24675:intron | 35.0% | |
| ! | AAGAGCATAATGGTAAGAAG+TGG | + | chr7.3:9961060-9961079 | None:intergenic | 35.0% |
| ! | AATACTTACAAAGCGTTCGT+AGG | + | chr7.3:9962078-9962097 | None:intergenic | 35.0% |
| ! | CAAATGCCATTTGAAGAAAG+TGG | - | chr7.3:9961762-9961781 | MS.gene24675:intron | 35.0% |
| ! | CAGGTAATCACACTATTTTG+TGG | + | chr7.3:9961416-9961435 | None:intergenic | 35.0% |
| ! | TGATTTAATCGGTTCAACCA+CGG | + | chr7.3:9962259-9962278 | None:intergenic | 35.0% |
| !! | ACAAAAATGGTTTTACGAGG+CGG | + | chr7.3:9959270-9959289 | None:intergenic | 35.0% |
| !! | CTCCTGCACATTTTAAGTAT+AGG | + | chr7.3:9961497-9961516 | None:intergenic | 35.0% |
| !!! | AGTGTCTTTGGTTGGTTTTA+AGG | - | chr7.3:9960640-9960659 | MS.gene24675:intron | 35.0% |
| !!! | GCGTTGATGTTGTTTTTACA+GGG | - | chr7.3:9962042-9962061 | MS.gene24675:intron | 35.0% |
| !!! | GTGTCTTTGGTTGGTTTTAA+GGG | - | chr7.3:9960641-9960660 | MS.gene24675:intron | 35.0% |
| AAAATCAAGAAAGCCAAGCC+TGG | + | chr7.3:9959204-9959223 | None:intergenic | 40.0% | |
| AAACCGTTGGCAGTTAAGAA+TGG | - | chr7.3:9959575-9959594 | MS.gene24675:CDS | 40.0% | |
| AACAAGTGTGTTGTGCTCTT+AGG | - | chr7.3:9960076-9960095 | MS.gene24675:CDS | 40.0% | |
| AACCGTTGGCAGTTAAGAAT+GGG | - | chr7.3:9959576-9959595 | MS.gene24675:CDS | 40.0% | |
| AAGATCGTGAGGGACAAAAA+TGG | + | chr7.3:9959283-9959302 | None:intergenic | 40.0% | |
| AATAGTGATATCTCCGGCTT+AGG | + | chr7.3:9962581-9962600 | None:intergenic | 40.0% | |
| AATGTACTGTTGCTGGAGTT+GGG | + | chr7.3:9960992-9961011 | None:intergenic | 40.0% | |
| ACAGTCTACTACTACCGTTT+GGG | - | chr7.3:9961131-9961150 | MS.gene24675:intron | 40.0% | |
| ACTCCAGCAACAGTACATTA+CGG | - | chr7.3:9960993-9961012 | MS.gene24675:intron | 40.0% | |
| ACTTAACATTACCAAAGGCG+AGG | - | chr7.3:9962465-9962484 | MS.gene24675:intron | 40.0% | |
| AGCATAATGGTAAGAAGTGG+TGG | + | chr7.3:9961057-9961076 | None:intergenic | 40.0% | |
| ATGAGTCATCAAGATCGTGA+GGG | + | chr7.3:9959293-9959312 | None:intergenic | 40.0% | |
| CAAACAGAGTCACTAACAAC+AGG | + | chr7.3:9962692-9962711 | None:intergenic | 40.0% | |
| CACGACAAAAAACTGTTCCA+TGG | - | chr7.3:9959362-9959381 | MS.gene24675:intron | 40.0% | |
| CATTATGCTCTTTACGAGTC+TGG | - | chr7.3:9961068-9961087 | MS.gene24675:intron | 40.0% | |
| CATTCACAGCATACAATGCA+AGG | - | chr7.3:9961736-9961755 | MS.gene24675:intron | 40.0% | |
| CCAACTACTCCAAACTTGAT+AGG | + | chr7.3:9961203-9961222 | None:intergenic | 40.0% | |
| CGATAACTGAATCAGACTCA+AGG | + | chr7.3:9960619-9960638 | None:intergenic | 40.0% | |
| CGGTAGTAGTAGACTGTATT+AGG | + | chr7.3:9961128-9961147 | None:intergenic | 40.0% | |
| CTGTTGTTAGTGACTCTGTT+TGG | - | chr7.3:9962690-9962709 | MS.gene24675:CDS | 40.0% | |
| CTTGCATTGTATGCTGTGAA+TGG | + | chr7.3:9961738-9961757 | None:intergenic | 40.0% | |
| GACATGAAGAATGCAATGGA+AGG | - | chr7.3:9962002-9962021 | MS.gene24675:intron | 40.0% | |
| GGAAGACAATCGAAGAACAA+AGG | + | chr7.3:9960682-9960701 | None:intergenic | 40.0% | |
| GGCGTTCATGTTATCATGTT+GGG | - | chr7.3:9961822-9961841 | MS.gene24675:intron | 40.0% | |
| GGGATTTACAGAAGGTTAAC+AGG | - | chr7.3:9961895-9961914 | MS.gene24675:intron | 40.0% | |
| GTCCAGTGCATATTACCATT+GGG | - | chr7.3:9962359-9962378 | MS.gene24675:intron | 40.0% | |
| GTTATCGTAGTGTCTTTGGT+TGG | - | chr7.3:9960632-9960651 | MS.gene24675:intron | 40.0% | |
| TAACAGGGGAAAAACTCCTT+GGG | - | chr7.3:9961911-9961930 | MS.gene24675:intron | 40.0% | |
| TAATGTACTGTTGCTGGAGT+TGG | + | chr7.3:9960993-9961012 | None:intergenic | 40.0% | |
| TACAGTCTACTACTACCGTT+TGG | - | chr7.3:9961130-9961149 | MS.gene24675:intron | 40.0% | |
| TACTATATACACCTCGCCTT+TGG | + | chr7.3:9962479-9962498 | None:intergenic | 40.0% | |
| TACTTATAGGCAGACAAACC+AGG | - | chr7.3:9960747-9960766 | MS.gene24675:CDS | 40.0% | |
| TCCAGTGCATATTACCATTG+GGG | - | chr7.3:9962360-9962379 | MS.gene24675:intron | 40.0% | |
| TCCCTGAATAGTGATATCTC+CGG | + | chr7.3:9962587-9962606 | None:intergenic | 40.0% | |
| TGGCGTTCATGTTATCATGT+TGG | - | chr7.3:9961821-9961840 | MS.gene24675:intron | 40.0% | |
| TGTATGTGGTGTGTGATGAT+AGG | - | chr7.3:9962546-9962565 | MS.gene24675:intron | 40.0% | |
| TTAACAGGGGAAAAACTCCT+TGG | - | chr7.3:9961910-9961929 | MS.gene24675:intron | 40.0% | |
| TTAACGCATCACATGCACTT+TGG | - | chr7.3:9962639-9962658 | MS.gene24675:CDS | 40.0% | |
| TTCCCATTCTTAACTGCCAA+CGG | + | chr7.3:9959581-9959600 | None:intergenic | 40.0% | |
| TTTGTCATATAGGTCAACCG+TGG | - | chr7.3:9962239-9962258 | MS.gene24675:intron | 40.0% | |
| ! | AAGAGCACAACACACTTGTT+AGG | + | chr7.3:9960076-9960095 | None:intergenic | 40.0% |
| ! | CAGACTCGTAAAGAGCATAA+TGG | + | chr7.3:9961070-9961089 | None:intergenic | 40.0% |
| ! | CCTATCAAGTTTGGAGTAGT+TGG | - | chr7.3:9961200-9961219 | MS.gene24675:intron | 40.0% |
| ! | GAAGAACAAAGGTGTGTAAG+AGG | + | chr7.3:9960671-9960690 | None:intergenic | 40.0% |
| ! | TAAGATTGTGTGAGCCTTGT+AGG | - | chr7.3:9960911-9960930 | MS.gene24675:CDS | 40.0% |
| ! | TTGAAGGGAACACATTTTCC+AGG | - | chr7.3:9959183-9959202 | MS.gene24675:CDS | 40.0% |
| ! | TTTTTGCTGAGTCACCCAAA+CGG | + | chr7.3:9961148-9961167 | None:intergenic | 40.0% |
| !! | AGGCTTGGCTTTCTTGATTT+TGG | - | chr7.3:9959203-9959222 | MS.gene24675:CDS | 40.0% |
| !! | GGGACAAAAATGGTTTTACG+AGG | + | chr7.3:9959273-9959292 | None:intergenic | 40.0% |
| !!! | AGTTTTGTTTAACGGGATGC+TGG | - | chr7.3:9959617-9959636 | MS.gene24675:intron | 40.0% |
| !!! | CGCGTTGATGTTGTTTTTAC+AGG | - | chr7.3:9962041-9962060 | MS.gene24675:intron | 40.0% |
| !!! | TTCTTATACCGATTTTGCCC+CGG | - | chr7.3:9961845-9961864 | MS.gene24675:intron | 40.0% |
| AACTAGACTACGGAGTAACC+AGG | + | chr7.3:9962177-9962196 | None:intergenic | 45.0% | |
| AACTGGTCGGATCAATCAGT+TGG | - | chr7.3:9962144-9962163 | MS.gene24675:intron | 45.0% | |
| AATGGCTCTTTGTGGACAAC+TGG | + | chr7.3:9961720-9961739 | None:intergenic | 45.0% | |
| ACTAGACTACGGAGTAACCA+GGG | + | chr7.3:9962176-9962195 | None:intergenic | 45.0% | |
| AGCCGGAGATATCACTATTC+AGG | - | chr7.3:9962582-9962601 | MS.gene24675:intron | 45.0% | |
| AGGTGGAGAAGACAACAACA+TGG | - | chr7.3:9959519-9959538 | MS.gene24675:CDS | 45.0% | |
| AGTAGACTGTATTAGGCCTG+AGG | + | chr7.3:9961121-9961140 | None:intergenic | 45.0% | |
| ATATCTCCGGCTTAGGATCT+TGG | + | chr7.3:9962574-9962593 | None:intergenic | 45.0% | |
| ATGCTGTGAATGGCTCTTTG+TGG | + | chr7.3:9961728-9961747 | None:intergenic | 45.0% | |
| CAATCAGTTGGATTTGACCC+TGG | - | chr7.3:9962156-9962175 | MS.gene24675:intron | 45.0% | |
| CATATTACCATTGGGGATGG+AGG | - | chr7.3:9962367-9962386 | MS.gene24675:intron | 45.0% | |
| CCAGCACTTCAACTAGACTA+CGG | + | chr7.3:9962187-9962206 | None:intergenic | 45.0% | |
| GAGATCTTGGACAAACAGAG+TGG | - | chr7.3:9961514-9961533 | MS.gene24675:intron | 45.0% | |
| GATGAGTCATCAAGATCGTG+AGG | + | chr7.3:9959294-9959313 | None:intergenic | 45.0% | |
| GCCGGAGATATCACTATTCA+GGG | - | chr7.3:9962583-9962602 | MS.gene24675:intron | 45.0% | |
| GCTTCAAGGGGATTTACAGA+AGG | - | chr7.3:9961887-9961906 | MS.gene24675:intron | 45.0% | |
| GGAGATATCACTATTCAGGG+AGG | - | chr7.3:9962586-9962605 | MS.gene24675:intron | 45.0% | |
| GGCAGTTAAGAATGGGAAGT+GGG | - | chr7.3:9959583-9959602 | MS.gene24675:CDS | 45.0% | |
| GGTCCAGTGCATATTACCAT+TGG | - | chr7.3:9962358-9962377 | MS.gene24675:intron | 45.0% | |
| GTAGACTGTATTAGGCCTGA+GGG | + | chr7.3:9961120-9961139 | None:intergenic | 45.0% | |
| GTGCATATTACCATTGGGGA+TGG | - | chr7.3:9962364-9962383 | MS.gene24675:intron | 45.0% | |
| TAATGAAGCTCATCAGGGTG+AGG | - | chr7.3:9961968-9961987 | MS.gene24675:intron | 45.0% | |
| TAGACTGTATTAGGCCTGAG+GGG | + | chr7.3:9961119-9961138 | None:intergenic | 45.0% | |
| TAGGTACCAAGATCCTAAGC+CGG | - | chr7.3:9962565-9962584 | MS.gene24675:intron | 45.0% | |
| TATTGTTGGGGTCGGTGAAT+AGG | - | chr7.3:9959499-9959518 | MS.gene24675:intron | 45.0% | |
| TCACAGCATACAATGCAAGG+TGG | - | chr7.3:9961739-9961758 | MS.gene24675:intron | 45.0% | |
| TCCCCAATGGTAATATGCAC+TGG | + | chr7.3:9962364-9962383 | None:intergenic | 45.0% | |
| TGAAGAATCCGGGGCAAAAT+CGG | + | chr7.3:9961856-9961875 | None:intergenic | 45.0% | |
| TGGCAGTTAAGAATGGGAAG+TGG | - | chr7.3:9959582-9959601 | MS.gene24675:CDS | 45.0% | |
| TGGTTCAACCAAACGACCAA+AGG | + | chr7.3:9961640-9961659 | None:intergenic | 45.0% | |
| TTTCCTGTAGTGACCATCCA+TGG | + | chr7.3:9961678-9961697 | None:intergenic | 45.0% | |
| ! | CTTTGGACATGGAGTACTAG+AGG | - | chr7.3:9962613-9962632 | MS.gene24675:CDS | 45.0% |
| ! | TCACATGCGTTGATGTTACG+TGG | - | chr7.3:9959465-9959484 | MS.gene24675:intron | 45.0% |
| !! | AAAATGGTTTTACGAGGCGG+TGG | + | chr7.3:9959267-9959286 | None:intergenic | 45.0% |
| !! | CATCACATGCACTTTGGAGT+TGG | - | chr7.3:9962645-9962664 | MS.gene24675:CDS | 45.0% |
| ATGGGACTCCTTTGGTCGTT+TGG | - | chr7.3:9961629-9961648 | MS.gene24675:intron | 50.0% | |
| ATGTCGTAATTGGTCCCCTC+AGG | - | chr7.3:9961102-9961121 | MS.gene24675:intron | 50.0% | |
| CATATGCAAGCCAACGTCCA+TGG | - | chr7.3:9961658-9961677 | MS.gene24675:intron | 50.0% | |
| CCGTAGTCTAGTTGAAGTGC+TGG | - | chr7.3:9962184-9962203 | MS.gene24675:intron | 50.0% | |
| GCAAACGCACTTTCTGCTAC+TGG | - | chr7.3:9961029-9961048 | MS.gene24675:intron | 50.0% | |
| GGGAAAAACTCCTTGGGTAG+TGG | - | chr7.3:9961917-9961936 | MS.gene24675:intron | 50.0% | |
| TAGTGACCATCCATGGACGT+TGG | + | chr7.3:9961671-9961690 | None:intergenic | 50.0% | |
| TCGCGAAGTAGTCAACTACC+TGG | + | chr7.3:9960768-9960787 | None:intergenic | 50.0% | |
| TCTGCGTAGGATAAGTCTCC+TGG | + | chr7.3:9961594-9961613 | None:intergenic | 50.0% | |
| TGAACCAACACCACTACCCA+AGG | + | chr7.3:9961930-9961949 | None:intergenic | 50.0% | |
| TGATGACTCATCGCCACAAC+AGG | - | chr7.3:9959302-9959321 | MS.gene24675:CDS | 50.0% | |
| TGCTCTTAGGACACCTGTGA+AGG | - | chr7.3:9960089-9960108 | MS.gene24675:CDS | 50.0% | |
| ! | AACTCCTTGGGTAGTGGTGT+TGG | - | chr7.3:9961923-9961942 | MS.gene24675:intron | 50.0% |
| ! | AGTGCGTTTGCTGAAGGAGA+TGG | + | chr7.3:9961020-9961039 | None:intergenic | 50.0% |
| ! | GCAGAAAGTGCGTTTGCTGA+AGG | + | chr7.3:9961026-9961045 | None:intergenic | 50.0% |
| ! | GGGAACACATTTTCCAGGCT+TGG | - | chr7.3:9959188-9959207 | MS.gene24675:CDS | 50.0% |
| ! | GTGCGTTTGCTGAAGGAGAT+GGG | + | chr7.3:9961019-9961038 | None:intergenic | 50.0% |
| ! | TGGACATGGAGTACTAGAGG+TGG | - | chr7.3:9962616-9962635 | MS.gene24675:CDS | 50.0% |
| !! | CATGGACGTTGGCTTGCATA+TGG | + | chr7.3:9961660-9961679 | None:intergenic | 50.0% |
| !! | CTATTCAGGGAGGCTAGCTT+TGG | - | chr7.3:9962596-9962615 | MS.gene24675:intron | 50.0% |
| !! | TGGTGTTGGTTCATGCTCCT+TGG | - | chr7.3:9961937-9961956 | MS.gene24675:intron | 50.0% |
| ACGATTGCCTCCATCCCCAA+TGG | + | chr7.3:9962377-9962396 | None:intergenic | 55.0% | |
| AGCTTTACAAGCGGGGTCAG+AGG | + | chr7.3:9962729-9962748 | None:intergenic | 55.0% | |
| ATCGTGAAGGCCTAGCCACA+AGG | - | chr7.3:9962392-9962411 | MS.gene24675:intron | 55.0% | |
| CGTCCATGGATGGTCACTAC+AGG | - | chr7.3:9961672-9961691 | MS.gene24675:intron | 55.0% | |
| GGGCCGTAATGTACTGTTGC+TGG | + | chr7.3:9960999-9961018 | None:intergenic | 55.0% | |
| TACAAGCGGGGTCAGAGGAA+AGG | + | chr7.3:9962724-9962743 | None:intergenic | 55.0% | |
| TGCAAGCCAACGTCCATGGA+TGG | - | chr7.3:9961662-9961681 | MS.gene24675:intron | 55.0% | |
| TGTTGGGGTCGGTGAATAGG+TGG | - | chr7.3:9959502-9959521 | MS.gene24675:intron | 55.0% | |
| !! | AGGGAGGCTAGCTTTGGACA+TGG | - | chr7.3:9962602-9962621 | MS.gene24675:intron | 55.0% |
| GGGGATGGAGGCAATCGTGA+AGG | - | chr7.3:9962379-9962398 | MS.gene24675:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 9959177 | 9962751 | 9959177 | ID=MS.gene24675 |
| chr7.3 | mRNA | 9959177 | 9962751 | 9959177 | ID=MS.gene24675.t1;Parent=MS.gene24675 |
| chr7.3 | exon | 9962605 | 9962751 | 9962605 | ID=MS.gene24675.t1.exon1;Parent=MS.gene24675.t1 |
| chr7.3 | CDS | 9962605 | 9962751 | 9962605 | ID=cds.MS.gene24675.t1;Parent=MS.gene24675.t1 |
| chr7.3 | exon | 9960707 | 9960995 | 9960707 | ID=MS.gene24675.t1.exon2;Parent=MS.gene24675.t1 |
| chr7.3 | CDS | 9960707 | 9960995 | 9960707 | ID=cds.MS.gene24675.t1;Parent=MS.gene24675.t1 |
| chr7.3 | exon | 9959840 | 9960414 | 9959840 | ID=MS.gene24675.t1.exon3;Parent=MS.gene24675.t1 |
| chr7.3 | CDS | 9959840 | 9960414 | 9959840 | ID=cds.MS.gene24675.t1;Parent=MS.gene24675.t1 |
| chr7.3 | exon | 9959515 | 9959603 | 9959515 | ID=MS.gene24675.t1.exon4;Parent=MS.gene24675.t1 |
| chr7.3 | CDS | 9959515 | 9959603 | 9959515 | ID=cds.MS.gene24675.t1;Parent=MS.gene24675.t1 |
| chr7.3 | exon | 9959177 | 9959360 | 9959177 | ID=MS.gene24675.t1.exon5;Parent=MS.gene24675.t1 |
| chr7.3 | CDS | 9959177 | 9959360 | 9959177 | ID=cds.MS.gene24675.t1;Parent=MS.gene24675.t1 |
| Gene Sequence |
| Protein sequence |
