Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027213.t1 | XP_003599916.1 | 99.8 | 518 | 1 | 0 | 1 | 518 | 1 | 518 | 1.30E-294 | 1021.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027213.t1 | P49299 | 79.1 | 516 | 104 | 2 | 5 | 518 | 3 | 516 | 7.0e-236 | 817.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027213.t1 | G7IZY5 | 99.8 | 518 | 1 | 0 | 1 | 518 | 1 | 518 | 9.6e-295 | 1021.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene027213 | MS.gene84175 | PPI |
| MS.gene027213 | MS.gene94677 | PPI |
| MS.gene004536 | MS.gene027213 | PPI |
| MS.gene027213 | MS.gene00278 | PPI |
| MS.gene28100 | MS.gene027213 | PPI |
| MS.gene027213 | MS.gene68895 | PPI |
| MS.gene027213 | MS.gene57427 | PPI |
| MS.gene027213 | MS.gene95617 | PPI |
| MS.gene027213 | MS.gene030781 | PPI |
| MS.gene027213 | MS.gene52387 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027213.t1 | MTR_3g048920 | 99.807 | 518 | 1 | 0 | 1 | 518 | 1 | 518 | 0.0 | 1060 |
| MS.gene027213.t1 | MTR_5g091930 | 84.569 | 499 | 72 | 2 | 18 | 516 | 15 | 508 | 0.0 | 881 |
| MS.gene027213.t1 | MTR_3g051920 | 75.000 | 88 | 22 | 0 | 1 | 88 | 3 | 90 | 3.03e-38 | 140 |
| MS.gene027213.t1 | MTR_2g061630 | 27.649 | 387 | 236 | 17 | 115 | 474 | 90 | 459 | 1.05e-26 | 113 |
| MS.gene027213.t1 | MTR_2g061630 | 28.512 | 242 | 150 | 9 | 115 | 343 | 90 | 321 | 6.01e-16 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027213.t1 | AT2G42790 | 77.451 | 510 | 112 | 2 | 10 | 518 | 2 | 509 | 0.0 | 829 |
| MS.gene027213.t1 | AT3G58750 | 77.778 | 504 | 109 | 1 | 16 | 516 | 8 | 511 | 0.0 | 827 |
| MS.gene027213.t1 | AT3G58740 | 69.023 | 481 | 145 | 1 | 10 | 490 | 2 | 478 | 0.0 | 702 |
| MS.gene027213.t1 | AT2G44350 | 25.445 | 393 | 255 | 14 | 115 | 484 | 91 | 468 | 4.70e-25 | 108 |
| MS.gene027213.t1 | AT2G44350 | 25.445 | 393 | 255 | 14 | 115 | 484 | 91 | 468 | 4.70e-25 | 108 |
| MS.gene027213.t1 | AT2G44350 | 25.445 | 393 | 255 | 14 | 115 | 484 | 90 | 467 | 4.84e-25 | 108 |
| MS.gene027213.t1 | AT2G44350 | 25.445 | 393 | 255 | 14 | 115 | 484 | 90 | 467 | 4.84e-25 | 108 |
| MS.gene027213.t1 | AT3G60100 | 25.635 | 394 | 252 | 16 | 115 | 483 | 87 | 464 | 1.43e-24 | 107 |
| MS.gene027213.t1 | AT3G60100 | 26.010 | 396 | 243 | 18 | 115 | 483 | 87 | 459 | 4.13e-23 | 102 |
| MS.gene027213.t1 | AT3G60100 | 25.291 | 344 | 223 | 12 | 115 | 436 | 87 | 418 | 1.94e-20 | 94.4 |
Find 147 sgRNAs with CRISPR-Local
Find 319 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCACCTCTCCGCTTCTTC+TGG | 0.134535 | 3.4:+46211157 | MS.gene027213:CDS |
| AAACAAATAGTGCGGATTAT+TGG | 0.256194 | 3.4:+46213986 | MS.gene027213:CDS |
| GGCTGAGAAAAGCACCTTTC+CGG | 0.262415 | 3.4:+46211894 | MS.gene027213:CDS |
| AAACGAAAGCTCAGTGGTTT+TGG | 0.263084 | 3.4:+46215319 | MS.gene027213:CDS |
| CTCAAAATGCTGAGTGAAAT+TGG | 0.267405 | 3.4:+46215113 | MS.gene027213:CDS |
| GGTCTCATAATCTTTGTATC+TGG | 0.289322 | 3.4:-46215993 | None:intergenic |
| AGGGTGGAGGAGCGCGGCGG+AGG | 0.292483 | 3.4:-46211134 | None:intergenic |
| AAGAGGCGGCTTGCTGGATC+TGG | 0.293362 | 3.4:+46216383 | MS.gene027213:CDS |
| GAGCGCGGCGGAGGAGGTGG+TGG | 0.294602 | 3.4:-46211125 | None:intergenic |
| ACTCGGTACAGTTCTTTCTT+TGG | 0.317553 | 3.4:-46216312 | None:intergenic |
| GAGGAGCGCGGCGGAGGAGG+TGG | 0.327253 | 3.4:-46211128 | None:intergenic |
| AGCTTTACCACAGGGTGTTT+TGG | 0.328277 | 3.4:+46212631 | MS.gene027213:CDS |
| CCAAATGTTGACTTCTACTC+TGG | 0.330372 | 3.4:+46215756 | MS.gene027213:CDS |
| CTTGAAATCATTGGCTTTGA+CGG | 0.332214 | 3.4:-46211272 | None:intergenic |
| GCTTCAAAGAGGCGGCTTGC+TGG | 0.333830 | 3.4:+46216377 | MS.gene027213:CDS |
| TCAACAATTTCTTATATTGA+TGG | 0.338960 | 3.4:+46211826 | MS.gene027213:CDS |
| TCCACCTCTCCGCTTCTTCT+GGG | 0.345972 | 3.4:+46211158 | MS.gene027213:CDS |
| GTGGAGGAGCGCGGCGGAGG+AGG | 0.350492 | 3.4:-46211131 | None:intergenic |
| AGGATACCCCATTGAGGAAT+TGG | 0.351549 | 3.4:+46211873 | MS.gene027213:CDS |
| GCACGAGTTAGACGAGGATT+AGG | 0.362486 | 3.4:-46214669 | None:intergenic |
| TTTGGTTTCCAGATATCAAC+TGG | 0.363189 | 3.4:+46211742 | MS.gene027213:intron |
| CCCTCGTATGGCTGGATACT+TGG | 0.364953 | 3.4:+46215944 | MS.gene027213:CDS |
| TCTACTCTGGATTAATATAT+AGG | 0.366202 | 3.4:+46215769 | MS.gene027213:CDS |
| TGGGGTATCCTCTATATCTA+AGG | 0.367156 | 3.4:-46211861 | None:intergenic |
| GATCACCTTCTTGAAATCAT+TGG | 0.371831 | 3.4:-46211281 | None:intergenic |
| TTCTCAGCCAATTCCTCAAT+GGG | 0.372252 | 3.4:-46211880 | None:intergenic |
| TTTCTTTGGTTGGTGCATAA+TGG | 0.376833 | 3.4:-46216298 | None:intergenic |
| GCCTCAAGATGCACATCCTA+TGG | 0.381113 | 3.4:+46213237 | MS.gene027213:CDS |
| AAGCGGAGAGGTGGAGAGGG+TGG | 0.388248 | 3.4:-46211150 | None:intergenic |
| GCTCTATATGGACCTCTTCA+TGG | 0.390267 | 3.4:+46214966 | MS.gene027213:CDS |
| GGCACATTGGCGGGAGTCCT+TGG | 0.394748 | 3.4:+46215965 | MS.gene027213:CDS |
| GGAGGTGTTGGAGCTCTATA+TGG | 0.397369 | 3.4:+46214954 | MS.gene027213:CDS |
| TGTATACGATTTCAGGGCTA+TGG | 0.401362 | 3.4:+46215884 | MS.gene027213:intron |
| TTATGTTCCAGGTATATGTT+GGG | 0.406887 | 3.4:+46216264 | MS.gene027213:intron |
| CCAGAGTAGAAGTCAACATT+TGG | 0.408985 | 3.4:-46215756 | None:intergenic |
| TTTCTCAGCCAATTCCTCAA+TGG | 0.409394 | 3.4:-46211881 | None:intergenic |
| AGGTGGTGGAGGTAGGAAGC+AGG | 0.411316 | 3.4:-46211111 | None:intergenic |
| TGCTGCGATTAATCTTAGAT+TGG | 0.420662 | 3.4:+46214176 | MS.gene027213:CDS |
| CGCGGCGGAGGAGGTGGTGG+AGG | 0.421471 | 3.4:-46211122 | None:intergenic |
| TTTATGTTCCAGGTATATGT+TGG | 0.421891 | 3.4:+46216263 | MS.gene027213:intron |
| GATGTATACACTGCTATTGC+TGG | 0.431579 | 3.4:+46214933 | MS.gene027213:CDS |
| TTTGCTATCCCTCGTATGGC+TGG | 0.434207 | 3.4:+46215936 | MS.gene027213:CDS |
| TGCAAGTCAGTTACAAGAAT+GGG | 0.444351 | 3.4:+46212586 | MS.gene027213:CDS |
| CGGAGAGGTGGAGAGGGTGG+AGG | 0.450743 | 3.4:-46211147 | None:intergenic |
| GCTTTGAGTTGTAGATATCA+AGG | 0.454553 | 3.4:-46213952 | None:intergenic |
| GGAGCAGTGTTTAAATATCC+AGG | 0.455528 | 3.4:-46211796 | None:intergenic |
| GGTACAGTTCTTTCTTTGGT+TGG | 0.464828 | 3.4:-46216308 | None:intergenic |
| AGTTTGTTGGATGGAAGAAC+AGG | 0.466071 | 3.4:-46214210 | None:intergenic |
| CTCCGTGTAAGAAAGTTTGT+TGG | 0.469750 | 3.4:-46214223 | None:intergenic |
| TATTTAGGTAGCTGTTGCAT+TGG | 0.470865 | 3.4:+46215686 | MS.gene027213:intron |
| TGGATACTTGGCACATTGGC+GGG | 0.471996 | 3.4:+46215956 | MS.gene027213:CDS |
| ACCGTTGTTGATGAACGTAC+TGG | 0.472528 | 3.4:+46211214 | MS.gene027213:CDS |
| TTTATTTGCTATCCCTCGTA+TGG | 0.475056 | 3.4:+46215932 | MS.gene027213:CDS |
| AGCGTTCCTTTGACATTGGA+CGG | 0.476214 | 3.4:-46211190 | None:intergenic |
| GGTGAGCGTTCCTTTGACAT+TGG | 0.478015 | 3.4:-46211194 | None:intergenic |
| AAAGATTATGAGACCTCAAC+AGG | 0.478244 | 3.4:+46216001 | MS.gene027213:CDS |
| TTGGCTTTGACGGTGCCATC+AGG | 0.479200 | 3.4:-46211262 | None:intergenic |
| AACATTCCAGAGTTCATTGA+AGG | 0.481622 | 3.4:+46215146 | MS.gene027213:CDS |
| ACTGCTATTGCTGGAGGTGT+TGG | 0.483022 | 3.4:+46214942 | MS.gene027213:CDS |
| CTGAGAGCAGGATTTGCATC+AGG | 0.486015 | 3.4:-46213301 | None:intergenic |
| TCATTGAAGGTGTTAAAGCC+AGG | 0.487206 | 3.4:+46215159 | MS.gene027213:CDS |
| TCTTATATTGATGGTGATGA+GGG | 0.490146 | 3.4:+46211835 | MS.gene027213:CDS |
| CATATGAGATATGACACTTC+CGG | 0.491125 | 3.4:-46211913 | None:intergenic |
| GAGCTGTGAGGGTGGATAAA+CGG | 0.496737 | 3.4:-46211087 | None:intergenic |
| TTAACACCTTCAATGAACTC+TGG | 0.497621 | 3.4:-46215152 | None:intergenic |
| GCTGCGATTAATCTTAGATT+GGG | 0.498832 | 3.4:+46214177 | MS.gene027213:CDS |
| GCGGAGGAGGTGGTGGAGGT+AGG | 0.502506 | 3.4:-46211118 | None:intergenic |
| GAGGATTAGGTTTATATGAC+CGG | 0.503527 | 3.4:-46214656 | None:intergenic |
| CTGCAAGTCAGTTACAAGAA+TGG | 0.506092 | 3.4:+46212585 | MS.gene027213:CDS |
| GTATACGATTTCAGGGCTAT+GGG | 0.507227 | 3.4:+46215885 | MS.gene027213:intron |
| AGGAAGCAGGTGAGCTGTGA+GGG | 0.510628 | 3.4:-46211098 | None:intergenic |
| AAGAAGCGGAGAGGTGGAGA+GGG | 0.511382 | 3.4:-46211153 | None:intergenic |
| TCCCAGAAGAAGCGGAGAGG+TGG | 0.511422 | 3.4:-46211159 | None:intergenic |
| AATAGTGCGGATTATTGGAA+AGG | 0.516235 | 3.4:+46213991 | MS.gene027213:CDS |
| TTCTTATATTGATGGTGATG+AGG | 0.518608 | 3.4:+46211834 | MS.gene027213:CDS |
| TCCTCGTCTAACTCGTGCAC+TGG | 0.521732 | 3.4:+46214674 | MS.gene027213:CDS |
| CTGGATACTTGGCACATTGG+CGG | 0.525933 | 3.4:+46215955 | MS.gene027213:CDS |
| GAGAGGGTGGAGGAGCGCGG+CGG | 0.529792 | 3.4:-46211137 | None:intergenic |
| TGGCCGAGATCCTTTGATTG+AGG | 0.531611 | 3.4:+46215417 | MS.gene027213:CDS |
| GAGGGAATCCTTAGATATAG+AGG | 0.533890 | 3.4:+46211853 | MS.gene027213:CDS |
| TTAATCTTAGATTGGGAGGA+AGG | 0.535401 | 3.4:+46214184 | MS.gene027213:CDS |
| CAAAGGATCTCGGCCAACAA+TGG | 0.537051 | 3.4:-46215410 | None:intergenic |
| TAAGAAATTGTTGATCGCAC+AGG | 0.539966 | 3.4:-46211817 | None:intergenic |
| CTGTACGCCACCTTGCATCA+AGG | 0.546143 | 3.4:+46214748 | MS.gene027213:CDS |
| ACAGAGAATCAAGCATGTAA+AGG | 0.548629 | 3.4:-46214251 | None:intergenic |
| AACAATGGAAAACACTTCCT+CGG | 0.551488 | 3.4:-46215395 | None:intergenic |
| CCGTTGTTGATGAACGTACT+GGG | 0.553503 | 3.4:+46211215 | MS.gene027213:CDS |
| GGAAGTAACACCGACAAGCT+TGG | 0.554782 | 3.4:+46216335 | MS.gene027213:CDS |
| ATCCAACAAACTTTCTTACA+CGG | 0.558832 | 3.4:+46214221 | MS.gene027213:CDS |
| TGGATAAACACCTCAATCAA+AGG | 0.560363 | 3.4:-46215427 | None:intergenic |
| GTGGAGAGGGTGGAGGAGCG+CGG | 0.563453 | 3.4:-46211140 | None:intergenic |
| GTGTAAGAAAGTTTGTTGGA+TGG | 0.564513 | 3.4:-46214219 | None:intergenic |
| AGAGGCGGCTTGCTGGATCT+GGG | 0.566520 | 3.4:+46216384 | MS.gene027213:CDS |
| TCAACACTCAGCTTTACCAC+AGG | 0.567669 | 3.4:+46212622 | MS.gene027213:CDS |
| GTGTTACTTACTCTGAGAGC+AGG | 0.569172 | 3.4:-46213313 | None:intergenic |
| TGGCTGGATACTTGGCACAT+TGG | 0.571393 | 3.4:+46215952 | MS.gene027213:CDS |
| TGGAGAGATCCCAGAAGAAG+CGG | 0.573769 | 3.4:-46211167 | None:intergenic |
| CGAAGATGCACGACGCTGCA+CGG | 0.573848 | 3.4:+46211062 | MS.gene027213:CDS |
| AGATAACTGACCAAGCTTGT+CGG | 0.580957 | 3.4:-46216345 | None:intergenic |
| GAAGAAGCGGAGAGGTGGAG+AGG | 0.581479 | 3.4:-46211154 | None:intergenic |
| AATGTCAACGACTACAACAA+CGG | 0.582987 | 3.4:+46211036 | None:intergenic |
| ACACCTCAATCAAAGGATCT+CGG | 0.584090 | 3.4:-46215420 | None:intergenic |
| GAGAGATTTACCTTGATGCA+AGG | 0.588661 | 3.4:-46214758 | None:intergenic |
| CCTCAAGATGCACATCCTAT+GGG | 0.593639 | 3.4:+46213238 | MS.gene027213:CDS |
| CTTTGTATCTGGATCATCCA+AGG | 0.595344 | 3.4:-46215982 | None:intergenic |
| TCTTGTAACTGACTTGCAGA+AGG | 0.597030 | 3.4:-46212581 | None:intergenic |
| TCTCCACCGTCCAATGTCAA+AGG | 0.601407 | 3.4:+46211184 | MS.gene027213:CDS |
| GCGATTAATCTTAGATTGGG+AGG | 0.603867 | 3.4:+46214180 | MS.gene027213:CDS |
| CAAAGCCAATGATTTCAAGA+AGG | 0.604210 | 3.4:+46211276 | MS.gene027213:CDS |
| AAACTACGATCCTAGAGCAA+AGG | 0.609044 | 3.4:+46215357 | MS.gene027213:CDS |
| GAGATATGACACTTCCGGAA+AGG | 0.610123 | 3.4:-46211908 | None:intergenic |
| GGACTCAAACTTTATGACCC+TGG | 0.610890 | 3.4:+46211778 | MS.gene027213:CDS |
| TCGTTAGCTCCACCATGAAG+AGG | 0.611745 | 3.4:-46214978 | None:intergenic |
| CCCATAGGATGTGCATCTTG+AGG | 0.613545 | 3.4:-46213238 | None:intergenic |
| TATGTTCCAGGTATATGTTG+GGG | 0.614530 | 3.4:+46216265 | MS.gene027213:intron |
| GCATTAACAAGTACACCCAT+AGG | 0.615591 | 3.4:-46213253 | None:intergenic |
| AGTATTGAAGTCTCTCCTGA+TGG | 0.615879 | 3.4:+46211247 | MS.gene027213:CDS |
| TCCAGGTATATGTTGGGGAA+TGG | 0.616440 | 3.4:+46216270 | MS.gene027213:intron |
| AGAAAGGAAATAACCTGTTG+AGG | 0.620319 | 3.4:-46216014 | None:intergenic |
| TTGTCGGTGTTACTTCCACT+CGG | 0.620844 | 3.4:-46216329 | None:intergenic |
| TTGTTGGATGGAAGAACAGG+TGG | 0.622701 | 3.4:-46214207 | None:intergenic |
| GCCAAGTATCCAGCCATACG+AGG | 0.629802 | 3.4:-46215945 | None:intergenic |
| AAGCAGGTGAGCTGTGAGGG+TGG | 0.629853 | 3.4:-46211095 | None:intergenic |
| GAGCAGTGTTTAAATATCCA+GGG | 0.630707 | 3.4:-46211795 | None:intergenic |
| TCTTCATGGTGGAGCTAACG+AGG | 0.640510 | 3.4:+46214980 | MS.gene027213:CDS |
| CCCAGTACGTTCATCAACAA+CGG | 0.645173 | 3.4:-46211215 | None:intergenic |
| TATCAAATGCTTCAAAGAGG+CGG | 0.646028 | 3.4:+46216369 | MS.gene027213:CDS |
| TGATGCAAGGTGGCGTACAG+CGG | 0.651794 | 3.4:-46214745 | None:intergenic |
| CAACACTCAGCTTTACCACA+GGG | 0.656304 | 3.4:+46212623 | MS.gene027213:CDS |
| TAGGAAGCAGGTGAGCTGTG+AGG | 0.659761 | 3.4:-46211099 | None:intergenic |
| CCAAGTATCCAGCCATACGA+GGG | 0.661687 | 3.4:-46215944 | None:intergenic |
| CTGTATCAAATGCTTCAAAG+AGG | 0.663824 | 3.4:+46216366 | MS.gene027213:CDS |
| ATATAGAGGATACCCCATTG+AGG | 0.664619 | 3.4:+46211867 | MS.gene027213:CDS |
| AGATTTACCTTGATGCAAGG+TGG | 0.665635 | 3.4:-46214755 | None:intergenic |
| TCTCAGCCAATTCCTCAATG+GGG | 0.669370 | 3.4:-46211879 | None:intergenic |
| AGATCCCAGAAGAAGCGGAG+AGG | 0.669679 | 3.4:-46211162 | None:intergenic |
| TGAGAGACAAACAAATAGTG+CGG | 0.671447 | 3.4:+46213978 | MS.gene027213:CDS |
| TCTAGGAAACGAAAGCTCAG+TGG | 0.672377 | 3.4:+46215313 | MS.gene027213:intron |
| GTATACACTGCTATTGCTGG+AGG | 0.679988 | 3.4:+46214936 | MS.gene027213:CDS |
| ATCAACTGGGAAGAATGACA+AGG | 0.680165 | 3.4:+46211756 | MS.gene027213:CDS |
| CTATATGGACCTCTTCATGG+TGG | 0.692671 | 3.4:+46214969 | MS.gene027213:CDS |
| TCAACTGGGAAGAATGACAA+GGG | 0.700148 | 3.4:+46211757 | MS.gene027213:CDS |
| TCCAGTGCACGAGTTAGACG+AGG | 0.700211 | 3.4:-46214675 | None:intergenic |
| TTGGTTTCCAGATATCAACT+GGG | 0.707330 | 3.4:+46211743 | MS.gene027213:intron |
| AAAGAAAGAACTGTACCGAG+TGG | 0.709735 | 3.4:+46216314 | MS.gene027213:CDS |
| GTTCCTTTGACATTGGACGG+TGG | 0.730649 | 3.4:-46211187 | None:intergenic |
| AAGCTCACCAAAACACCCTG+TGG | 0.734798 | 3.4:-46212638 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAAATAGTGAAAAATT+CGG | - | chr3.4:46215919-46215938 | None:intergenic | 10.0% |
| !! | AAATGAAATATAAGTAAAAA+TGG | - | chr3.4:46212850-46212869 | None:intergenic | 10.0% |
| !!! | TTTTTACTTATATTTCATTT+TGG | + | chr3.4:46212850-46212869 | MS.gene027213:intron | 10.0% |
| !! | AAATATAAAGGCTAATAATA+AGG | - | chr3.4:46214435-46214454 | None:intergenic | 15.0% |
| !! | AAATATCGCTATAAATATAA+AGG | - | chr3.4:46214447-46214466 | None:intergenic | 15.0% |
| !! | AATAAAATAGTGAAAAATTC+GGG | - | chr3.4:46215918-46215937 | None:intergenic | 15.0% |
| !! | AATTATTAAAATAAGCAGAA+AGG | - | chr3.4:46211436-46211455 | None:intergenic | 15.0% |
| !! | TGATTTAATTCAACAATTAT+AGG | + | chr3.4:46214466-46214485 | MS.gene027213:intron | 15.0% |
| !! | TTTGTAGTAAATATTGTATT+TGG | - | chr3.4:46213065-46213084 | None:intergenic | 15.0% |
| !!! | ATTCTGTTACTTAAAATTAA+AGG | + | chr3.4:46213614-46213633 | MS.gene027213:intron | 15.0% |
| !!! | CTTTTTACTTAAATTTCATT+CGG | - | chr3.4:46212814-46212833 | None:intergenic | 15.0% |
| !!! | GATTTTTATGATGAAATATT+AGG | + | chr3.4:46211490-46211509 | MS.gene027213:intron | 15.0% |
| !!! | TATTTTTGATTTGATCAATT+GGG | + | chr3.4:46211393-46211412 | MS.gene027213:intron | 15.0% |
| !!! | TTATTTTTGATTTGATCAAT+TGG | + | chr3.4:46211392-46211411 | MS.gene027213:intron | 15.0% |
| !!! | TTCATATGTTTTTTAATTCA+GGG | + | chr3.4:46213929-46213948 | MS.gene027213:intron | 15.0% |
| !!! | TTCTGTTACTTAAAATTAAA+GGG | + | chr3.4:46213615-46213634 | MS.gene027213:intron | 15.0% |
| !!! | TTTTTACTTAAATTTCATTC+GGG | - | chr3.4:46212813-46212832 | None:intergenic | 15.0% |
| !! | AATGTAGAAAATGGAAAAAT+AGG | - | chr3.4:46213422-46213441 | None:intergenic | 20.0% |
| !! | ATAACATATACAGAAGATTA+AGG | - | chr3.4:46214040-46214059 | None:intergenic | 20.0% |
| !! | ATCATCCTTAATTTAGTAAT+GGG | + | chr3.4:46216214-46216233 | MS.gene027213:intron | 20.0% |
| !! | ATGAGATGAATAATCTAAAT+AGG | - | chr3.4:46214511-46214530 | None:intergenic | 20.0% |
| !! | ATGCCATTATTTGATTATTT+AGG | + | chr3.4:46215671-46215690 | MS.gene027213:intron | 20.0% |
| !! | CAATCTTATTCAAATATTCT+CGG | - | chr3.4:46215850-46215869 | None:intergenic | 20.0% |
| !! | CTACCTAAATAATCAAATAA+TGG | - | chr3.4:46215677-46215696 | None:intergenic | 20.0% |
| !! | TATCATCCTTAATTTAGTAA+TGG | + | chr3.4:46216213-46216232 | MS.gene027213:intron | 20.0% |
| !! | TCAACAATTTCTTATATTGA+TGG | + | chr3.4:46211826-46211845 | MS.gene027213:CDS | 20.0% |
| !! | TGAAATAACAAAGTTAGAAA+AGG | - | chr3.4:46212678-46212697 | None:intergenic | 20.0% |
| !! | TGAATCCTAACAAAATATAA+AGG | - | chr3.4:46213854-46213873 | None:intergenic | 20.0% |
| !! | TTAAATCATAAACTGTCTTT+AGG | - | chr3.4:46214308-46214327 | None:intergenic | 20.0% |
| !! | TTTATGATGAAATATTAGGT+GGG | + | chr3.4:46211494-46211513 | MS.gene027213:intron | 20.0% |
| !!! | ACTTTGTTATTTCATTTTAC+TGG | + | chr3.4:46212684-46212703 | MS.gene027213:intron | 20.0% |
| !!! | ATGTCTGTTACATATTTTTT+TGG | + | chr3.4:46215472-46215491 | MS.gene027213:intron | 20.0% |
| !!! | GTTCATATGTTTTTTAATTC+AGG | + | chr3.4:46213928-46213947 | MS.gene027213:intron | 20.0% |
| !!! | TACTTATATTTCATTTTGGA+GGG | + | chr3.4:46212854-46212873 | MS.gene027213:intron | 20.0% |
| !!! | TCTTTAGTTTTCTTTGAAAT+CGG | - | chr3.4:46214866-46214885 | None:intergenic | 20.0% |
| !!! | TGAGTTTCTTGAAAATTTTA+AGG | + | chr3.4:46212349-46212368 | MS.gene027213:intron | 20.0% |
| !!! | TTACTTATATTTCATTTTGG+AGG | + | chr3.4:46212853-46212872 | MS.gene027213:intron | 20.0% |
| !!! | TTTTATGATGAAATATTAGG+TGG | + | chr3.4:46211493-46211512 | MS.gene027213:intron | 20.0% |
| !!! | TTTTTCCCATTACTAAATTA+AGG | - | chr3.4:46216222-46216241 | None:intergenic | 20.0% |
| !!! | TTTTTTGGGATCAAATTTTA+TGG | + | chr3.4:46212418-46212437 | MS.gene027213:intron | 20.0% |
| ! | AAATTCCACAAAATAAAGTC+AGG | - | chr3.4:46213393-46213412 | None:intergenic | 25.0% |
| ! | AACAATTATAGGATCATGAT+AGG | + | chr3.4:46214477-46214496 | MS.gene027213:intron | 25.0% |
| ! | AAGAACCTAGAAGAAATAAA+GGG | - | chr3.4:46215194-46215213 | None:intergenic | 25.0% |
| ! | AATCTATTCAAATGTTACAC+CGG | + | chr3.4:46211666-46211685 | MS.gene027213:intron | 25.0% |
| ! | AGATGCTACAAATTAAATAC+AGG | - | chr3.4:46216120-46216139 | None:intergenic | 25.0% |
| ! | AGGCATATACATAACATAAA+AGG | - | chr3.4:46212766-46212785 | None:intergenic | 25.0% |
| ! | AGTACTAGCATAATCATTAT+TGG | + | chr3.4:46216076-46216095 | MS.gene027213:intron | 25.0% |
| ! | AGTGGATAAATGTTATGTTA+AGG | + | chr3.4:46212709-46212728 | MS.gene027213:intron | 25.0% |
| ! | AGTTAAAAACGTAACATATG+AGG | - | chr3.4:46212060-46212079 | None:intergenic | 25.0% |
| ! | ATAATTTCACTTGAGAGATT+AGG | - | chr3.4:46212375-46212394 | None:intergenic | 25.0% |
| ! | CATTGTCAAAATGTAGAAAA+TGG | - | chr3.4:46213431-46213450 | None:intergenic | 25.0% |
| ! | CCTTTAAATTATCATGACAA+AGG | - | chr3.4:46212928-46212947 | None:intergenic | 25.0% |
| ! | CCTTTGTCATGATAATTTAA+AGG | + | chr3.4:46212925-46212944 | MS.gene027213:intron | 25.0% |
| ! | GCGAGATATAATTTAAAGAA+AGG | - | chr3.4:46216033-46216052 | None:intergenic | 25.0% |
| ! | GCTATATTATAGCAACTATT+TGG | - | chr3.4:46213094-46213113 | None:intergenic | 25.0% |
| ! | GTGGATAAATGTTATGTTAA+GGG | + | chr3.4:46212710-46212729 | MS.gene027213:intron | 25.0% |
| ! | GTTCAAATTCTACTATGTTA+CGG | - | chr3.4:46213027-46213046 | None:intergenic | 25.0% |
| ! | TAAGAACCTAGAAGAAATAA+AGG | - | chr3.4:46215195-46215214 | None:intergenic | 25.0% |
| ! | TATCAATAAAGATTGCTGAT+TGG | + | chr3.4:46215213-46215232 | MS.gene027213:intron | 25.0% |
| ! | TCTACTCTGGATTAATATAT+AGG | + | chr3.4:46215769-46215788 | MS.gene027213:CDS | 25.0% |
| ! | TGCCATAAAAATGTTTATCT+TGG | - | chr3.4:46213537-46213556 | None:intergenic | 25.0% |
| ! | TGTCATGATAATTTAAAGGA+GGG | + | chr3.4:46212929-46212948 | MS.gene027213:intron | 25.0% |
| ! | TTGAATAAGATTGATCTGAT+GGG | + | chr3.4:46215857-46215876 | MS.gene027213:intron | 25.0% |
| ! | TTGTCATGATAATTTAAAGG+AGG | + | chr3.4:46212928-46212947 | MS.gene027213:intron | 25.0% |
| ! | TTTACAAAAATTGTAGCATC+TGG | + | chr3.4:46216143-46216162 | MS.gene027213:intron | 25.0% |
| ! | TTTGAATAAGATTGATCTGA+TGG | + | chr3.4:46215856-46215875 | MS.gene027213:intron | 25.0% |
| !! | ACTAATACATTTTATGTTCC+AGG | + | chr3.4:46216253-46216272 | MS.gene027213:intron | 25.0% |
| !! | GATTTGATTTCTTCTCTTAT+TGG | + | chr3.4:46211692-46211711 | MS.gene027213:intron | 25.0% |
| !! | TATCTTGGAAAATGATTTTC+TGG | + | chr3.4:46216166-46216185 | MS.gene027213:intron | 25.0% |
| !! | TGCCAAGATAAACATTTTTA+TGG | + | chr3.4:46213532-46213551 | MS.gene027213:intron | 25.0% |
| !! | TGCTTGATTTTCTTTCAATT+TGG | + | chr3.4:46211313-46211332 | MS.gene027213:intron | 25.0% |
| !!! | ATCTAAGACACTCTAAATTT+TGG | + | chr3.4:46213779-46213798 | MS.gene027213:intron | 25.0% |
| !!! | ATTTTAGTGTTGTCAAATAG+CGG | + | chr3.4:46212991-46213010 | MS.gene027213:intron | 25.0% |
| !!! | GATAATCAAATCATTTTAGC+TGG | + | chr3.4:46212111-46212130 | MS.gene027213:intron | 25.0% |
| !!! | TGTTTATTTTGACATTTGTC+TGG | + | chr3.4:46213568-46213587 | MS.gene027213:intron | 25.0% |
| !!! | TGTTTATTTTGACTTATGTC+TGG | + | chr3.4:46213471-46213490 | MS.gene027213:intron | 25.0% |
| !!! | TTGCATAACATTTGTTTTGT+AGG | + | chr3.4:46213198-46213217 | MS.gene027213:intron | 25.0% |
| AAAATAGTGAAAAATTCGGG+TGG | - | chr3.4:46215915-46215934 | None:intergenic | 30.0% | |
| AAACCTATCTTGAGAAAATG+AGG | - | chr3.4:46212786-46212805 | None:intergenic | 30.0% | |
| AATAAAGGGTAACATTAACC+TGG | - | chr3.4:46215180-46215199 | None:intergenic | 30.0% | |
| AATATAGCTCCAATTGATAG+TGG | + | chr3.4:46213106-46213125 | MS.gene027213:intron | 30.0% | |
| AATATTAAGACTCATGCTAG+TGG | + | chr3.4:46211590-46211609 | MS.gene027213:intron | 30.0% | |
| AATGCAACCTTCAATTATAC+AGG | + | chr3.4:46215085-46215104 | MS.gene027213:intron | 30.0% | |
| AATGTTTAGTCAGTTGCTAA+AGG | + | chr3.4:46213505-46213524 | MS.gene027213:intron | 30.0% | |
| ACTGGTGTAATTATCTAACT+TGG | + | chr3.4:46213172-46213191 | MS.gene027213:intron | 30.0% | |
| ATCCAACAAACTTTCTTACA+CGG | + | chr3.4:46214221-46214240 | MS.gene027213:CDS | 30.0% | |
| CAATTTCCATCACAAAAGTA+AGG | - | chr3.4:46213367-46213386 | None:intergenic | 30.0% | |
| CTGCAAAAAACAATGTATAG+TGG | - | chr3.4:46214630-46214649 | None:intergenic | 30.0% | |
| GATAAATGTTATGTTAAGGG+TGG | + | chr3.4:46212713-46212732 | MS.gene027213:intron | 30.0% | |
| GATAGAGTCTTCTATTTGAA+TGG | - | chr3.4:46213722-46213741 | None:intergenic | 30.0% | |
| GATCCACATATCATAAACAA+TGG | - | chr3.4:46212468-46212487 | None:intergenic | 30.0% | |
| GCGAATCAAATGATATAACA+CGG | - | chr3.4:46213885-46213904 | None:intergenic | 30.0% | |
| GTAGAAAATGGAAAAATAGG+AGG | - | chr3.4:46213419-46213438 | None:intergenic | 30.0% | |
| GTTCAAATTCCACTATCAAT+TGG | - | chr3.4:46213118-46213137 | None:intergenic | 30.0% | |
| TAAAGGCTAATAATAAGGAG+AGG | - | chr3.4:46214430-46214449 | None:intergenic | 30.0% | |
| TAAAGGGACTTAGTTAAGAA+AGG | + | chr3.4:46213631-46213650 | MS.gene027213:intron | 30.0% | |
| TAACAGACATAACATAGACA+GGG | - | chr3.4:46215462-46215481 | None:intergenic | 30.0% | |
| TAAGCATGTAGTATTCAGAA+TGG | + | chr3.4:46212228-46212247 | MS.gene027213:intron | 30.0% | |
| TGAACAATATATCCAGCTTA+AGG | - | chr3.4:46215523-46215542 | None:intergenic | 30.0% | |
| TGACTTATGTCTGGATTATT+TGG | + | chr3.4:46213480-46213499 | MS.gene027213:intron | 30.0% | |
| TTATGTTCCAGGTATATGTT+GGG | + | chr3.4:46216264-46216283 | MS.gene027213:intron | 30.0% | |
| TTGTTAAAGCAACGTATAAC+AGG | - | chr3.4:46214891-46214910 | None:intergenic | 30.0% | |
| TTTATGTTCCAGGTATATGT+TGG | + | chr3.4:46216263-46216282 | MS.gene027213:intron | 30.0% | |
| ! | AAACAAATAGTGCGGATTAT+TGG | + | chr3.4:46213986-46214005 | MS.gene027213:CDS | 30.0% |
| ! | ATGCATATCTTTTCAGTGTA+TGG | + | chr3.4:46212551-46212570 | MS.gene027213:intron | 30.0% |
| ! | GCAGACCTTTATATTTTGTT+AGG | + | chr3.4:46213846-46213865 | MS.gene027213:intron | 30.0% |
| ! | TATTTCATTTTACTGGCAAG+TGG | + | chr3.4:46212691-46212710 | MS.gene027213:intron | 30.0% |
| ! | TGTTACCCTTTATTTCTTCT+AGG | + | chr3.4:46215186-46215205 | MS.gene027213:intron | 30.0% |
| ! | TTGTCTGATGCTCTAATTTT+TGG | + | chr3.4:46211724-46211743 | MS.gene027213:intron | 30.0% |
| !! | TCTTATATTGATGGTGATGA+GGG | + | chr3.4:46211835-46211854 | MS.gene027213:CDS | 30.0% |
| !! | TGTATACCTTACTTTTGTGA+TGG | + | chr3.4:46213358-46213377 | MS.gene027213:intron | 30.0% |
| !! | TTCTTATATTGATGGTGATG+AGG | + | chr3.4:46211834-46211853 | MS.gene027213:CDS | 30.0% |
| !!! | CTATACATTGTTTTTTGCAG+TGG | + | chr3.4:46214630-46214649 | MS.gene027213:intron | 30.0% |
| !!! | TGATTCCTGACTTTATTTTG+TGG | + | chr3.4:46213385-46213404 | MS.gene027213:intron | 30.0% |
| !!! | TTTCTGGCTGTATCATTTTA+AGG | + | chr3.4:46216182-46216201 | MS.gene027213:intron | 30.0% |
| !!! | TTTTTTAAGACCTTTGCTCT+AGG | - | chr3.4:46215370-46215389 | None:intergenic | 30.0% |
| AAACAATGGCCATAAAAGCA+GGG | - | chr3.4:46212454-46212473 | None:intergenic | 35.0% | |
| AAAGATTATGAGACCTCAAC+AGG | + | chr3.4:46216001-46216020 | MS.gene027213:CDS | 35.0% | |
| AACAATGGAAAACACTTCCT+CGG | - | chr3.4:46215398-46215417 | None:intergenic | 35.0% | |
| AACATTCCAGAGTTCATTGA+AGG | + | chr3.4:46215146-46215165 | MS.gene027213:CDS | 35.0% | |
| AATTGTAGCATCTGGTATCT+TGG | + | chr3.4:46216151-46216170 | MS.gene027213:intron | 35.0% | |
| ACAGAGAATCAAGCATGTAA+AGG | - | chr3.4:46214254-46214273 | None:intergenic | 35.0% | |
| ACATATCTGTGACGTCTAAT+CGG | - | chr3.4:46212290-46212309 | None:intergenic | 35.0% | |
| AGAAAGGAAATAACCTGTTG+AGG | - | chr3.4:46216017-46216036 | None:intergenic | 35.0% | |
| AGCTGGATATATTGTTCATG+AGG | + | chr3.4:46215525-46215544 | MS.gene027213:intron | 35.0% | |
| AGGTCTGCTCATAATATTAG+AGG | - | chr3.4:46213834-46213853 | None:intergenic | 35.0% | |
| ATCAACACCACTGCAAATAA+GGG | - | chr3.4:46214916-46214935 | None:intergenic | 35.0% | |
| ATTTAAACCAAACTGTCTGC+AGG | - | chr3.4:46214842-46214861 | None:intergenic | 35.0% | |
| CAAAGCCAATGATTTCAAGA+AGG | + | chr3.4:46211276-46211295 | MS.gene027213:CDS | 35.0% | |
| CATATGAGATATGACACTTC+CGG | - | chr3.4:46211916-46211935 | None:intergenic | 35.0% | |
| CATGATAATTTAAAGGAGGG+TGG | + | chr3.4:46212932-46212951 | MS.gene027213:intron | 35.0% | |
| CTAATCATGAAACAACGTTG+AGG | + | chr3.4:46212151-46212170 | MS.gene027213:intron | 35.0% | |
| CTCAAAATGCTGAGTGAAAT+TGG | + | chr3.4:46215113-46215132 | MS.gene027213:CDS | 35.0% | |
| CTGTATCAAATGCTTCAAAG+AGG | + | chr3.4:46216366-46216385 | MS.gene027213:CDS | 35.0% | |
| CTGTTACATATTCCTTAAGC+TGG | + | chr3.4:46215508-46215527 | MS.gene027213:intron | 35.0% | |
| GAAAATGGAAAAATAGGAGG+AGG | - | chr3.4:46213416-46213435 | None:intergenic | 35.0% | |
| GAACTTTGTATAGTGATTGC+AGG | - | chr3.4:46212906-46212925 | None:intergenic | 35.0% | |
| GAGAAGAAATCAAATCACAC+CGG | - | chr3.4:46211688-46211707 | None:intergenic | 35.0% | |
| GAGCAGTGTTTAAATATCCA+GGG | - | chr3.4:46211798-46211817 | None:intergenic | 35.0% | |
| GAGCTAACGAGGTAATTAAA+TGG | + | chr3.4:46214991-46215010 | MS.gene027213:intron | 35.0% | |
| GAGGATTAGGTTTATATGAC+CGG | - | chr3.4:46214659-46214678 | None:intergenic | 35.0% | |
| GATCACCTTCTTGAAATCAT+TGG | - | chr3.4:46211284-46211303 | None:intergenic | 35.0% | |
| GCTGCGATTAATCTTAGATT+GGG | + | chr3.4:46214177-46214196 | MS.gene027213:CDS | 35.0% | |
| GGAGTTTGTATACGATTTCA+GGG | + | chr3.4:46215878-46215897 | MS.gene027213:intron | 35.0% | |
| GGTCTCATAATCTTTGTATC+TGG | - | chr3.4:46215996-46216015 | None:intergenic | 35.0% | |
| GGTCTTAAAAAAATTGACCG+AGG | + | chr3.4:46215378-46215397 | MS.gene027213:CDS | 35.0% | |
| GGTGTAATTATCTAACTTGG+TGG | + | chr3.4:46213175-46213194 | MS.gene027213:intron | 35.0% | |
| GTAACAGACATAACATAGAC+AGG | - | chr3.4:46215463-46215482 | None:intergenic | 35.0% | |
| GTGCATGAAACCTTTATACA+GGG | + | chr3.4:46211964-46211983 | MS.gene027213:intron | 35.0% | |
| TAAACAATGGCCATAAAAGC+AGG | - | chr3.4:46212455-46212474 | None:intergenic | 35.0% | |
| TAACACTTGTGTAATGAACG+TGG | + | chr3.4:46213330-46213349 | MS.gene027213:intron | 35.0% | |
| TAAGAAATTGTTGATCGCAC+AGG | - | chr3.4:46211820-46211839 | None:intergenic | 35.0% | |
| TAATTTAAAGGAGGGTGGTT+AGG | + | chr3.4:46212937-46212956 | MS.gene027213:intron | 35.0% | |
| TAGATTTACACCAGCATATC+CGG | - | chr3.4:46211652-46211671 | None:intergenic | 35.0% | |
| TATCAAATGCTTCAAAGAGG+CGG | + | chr3.4:46216369-46216388 | MS.gene027213:CDS | 35.0% | |
| TATGTTCCAGGTATATGTTG+GGG | + | chr3.4:46216265-46216284 | MS.gene027213:intron | 35.0% | |
| TATTTAGGTAGCTGTTGCAT+TGG | + | chr3.4:46215686-46215705 | MS.gene027213:intron | 35.0% | |
| TGAGAGACAAACAAATAGTG+CGG | + | chr3.4:46213978-46213997 | MS.gene027213:CDS | 35.0% | |
| TGCAAGTCAGTTACAAGAAT+GGG | + | chr3.4:46212586-46212605 | MS.gene027213:CDS | 35.0% | |
| TGCTGCGATTAATCTTAGAT+TGG | + | chr3.4:46214176-46214195 | MS.gene027213:CDS | 35.0% | |
| TGGATAAACACCTCAATCAA+AGG | - | chr3.4:46215430-46215449 | None:intergenic | 35.0% | |
| TGGCCATTGTTTATGATATG+TGG | + | chr3.4:46212462-46212481 | MS.gene027213:intron | 35.0% | |
| TGTGCATGAAACCTTTATAC+AGG | + | chr3.4:46211963-46211982 | MS.gene027213:intron | 35.0% | |
| TTAACACCTTCAATGAACTC+TGG | - | chr3.4:46215155-46215174 | None:intergenic | 35.0% | |
| TTAATCTTAGATTGGGAGGA+AGG | + | chr3.4:46214184-46214203 | MS.gene027213:CDS | 35.0% | |
| TTGGTTTCCAGATATCAACT+GGG | + | chr3.4:46211743-46211762 | MS.gene027213:intron | 35.0% | |
| TTTGCATCTCAGTTAGTCAA+TGG | - | chr3.4:46212504-46212523 | None:intergenic | 35.0% | |
| ! | AACAATACCCTTATTTGCAG+TGG | + | chr3.4:46214906-46214925 | MS.gene027213:intron | 35.0% |
| ! | AATAGTGCGGATTATTGGAA+AGG | + | chr3.4:46213991-46214010 | MS.gene027213:CDS | 35.0% |
| ! | ATGCCTCATTTTCTCAAGAT+AGG | + | chr3.4:46212780-46212799 | MS.gene027213:intron | 35.0% |
| ! | CAATTTCACTCAGCATTTTG+AGG | - | chr3.4:46215115-46215134 | None:intergenic | 35.0% |
| ! | CTGATGAGTATTTTGTCAAG+AGG | + | chr3.4:46215724-46215743 | MS.gene027213:CDS | 35.0% |
| ! | TAAACTTCTCCGAGTCTTTT+TGG | + | chr3.4:46214809-46214828 | MS.gene027213:intron | 35.0% |
| ! | TCAAATTTTATGGCCTGACA+TGG | + | chr3.4:46212428-46212447 | MS.gene027213:intron | 35.0% |
| ! | TTTCTTTGGTTGGTGCATAA+TGG | - | chr3.4:46216301-46216320 | None:intergenic | 35.0% |
| ! | TTTGGTTTCCAGATATCAAC+TGG | + | chr3.4:46211742-46211761 | MS.gene027213:intron | 35.0% |
| !! | CTGTGTGTTGTTTATTCTCT+AGG | + | chr3.4:46215296-46215315 | MS.gene027213:intron | 35.0% |
| !! | CTTGAAATCATTGGCTTTGA+CGG | - | chr3.4:46211275-46211294 | None:intergenic | 35.0% |
| !! | GCTTTGAGTTGTAGATATCA+AGG | - | chr3.4:46213955-46213974 | None:intergenic | 35.0% |
| !! | GTGTAAGAAAGTTTGTTGGA+TGG | - | chr3.4:46214222-46214241 | None:intergenic | 35.0% |
| !! | TTTATTTGCTATCCCTCGTA+TGG | + | chr3.4:46215932-46215951 | MS.gene027213:CDS | 35.0% |
| !! | TTTTGGAGGGCGTAATTTAT+AGG | + | chr3.4:46212867-46212886 | MS.gene027213:intron | 35.0% |
| AAACTACGATCCTAGAGCAA+AGG | + | chr3.4:46215357-46215376 | MS.gene027213:CDS | 40.0% | |
| AAAGAAAGAACTGTACCGAG+TGG | + | chr3.4:46216314-46216333 | MS.gene027213:CDS | 40.0% | |
| AAATACAGGTGTATCACCAC+AGG | - | chr3.4:46216106-46216125 | None:intergenic | 40.0% | |
| ACACCTCAATCAAAGGATCT+CGG | - | chr3.4:46215423-46215442 | None:intergenic | 40.0% | |
| ACTCGGTACAGTTCTTTCTT+TGG | - | chr3.4:46216315-46216334 | None:intergenic | 40.0% | |
| AGATAACTGACCAAGCTTGT+CGG | - | chr3.4:46216348-46216367 | None:intergenic | 40.0% | |
| AGATTTACCTTGATGCAAGG+TGG | - | chr3.4:46214758-46214777 | None:intergenic | 40.0% | |
| AGGACAGCCTGTATAATTGA+AGG | - | chr3.4:46215095-46215114 | None:intergenic | 40.0% | |
| ATATAGAGGATACCCCATTG+AGG | + | chr3.4:46211867-46211886 | MS.gene027213:CDS | 40.0% | |
| ATCAACTGGGAAGAATGACA+AGG | + | chr3.4:46211756-46211775 | MS.gene027213:CDS | 40.0% | |
| CATAGACAGGGAATACAAGA+TGG | - | chr3.4:46215450-46215469 | None:intergenic | 40.0% | |
| CATCAACACCACTGCAAATA+AGG | - | chr3.4:46214917-46214936 | None:intergenic | 40.0% | |
| CCAGAGTAGAAGTCAACATT+TGG | - | chr3.4:46215759-46215778 | None:intergenic | 40.0% | |
| CTATACACGACCCTGTATAA+AGG | - | chr3.4:46211977-46211996 | None:intergenic | 40.0% | |
| CTCCGTGTAAGAAAGTTTGT+TGG | - | chr3.4:46214226-46214245 | None:intergenic | 40.0% | |
| CTGCAAGTCAGTTACAAGAA+TGG | + | chr3.4:46212585-46212604 | MS.gene027213:CDS | 40.0% | |
| CTTTGTATCTGGATCATCCA+AGG | - | chr3.4:46215985-46216004 | None:intergenic | 40.0% | |
| GAGAGATTTACCTTGATGCA+AGG | - | chr3.4:46214761-46214780 | None:intergenic | 40.0% | |
| GAGGGAATCCTTAGATATAG+AGG | + | chr3.4:46211853-46211872 | MS.gene027213:CDS | 40.0% | |
| GATGTATACACTGCTATTGC+TGG | + | chr3.4:46214933-46214952 | MS.gene027213:CDS | 40.0% | |
| GCATTAACAAGTACACCCAT+AGG | - | chr3.4:46213256-46213275 | None:intergenic | 40.0% | |
| GCGATTAATCTTAGATTGGG+AGG | + | chr3.4:46214180-46214199 | MS.gene027213:CDS | 40.0% | |
| GGAGCAGTGTTTAAATATCC+AGG | - | chr3.4:46211799-46211818 | None:intergenic | 40.0% | |
| GGGAGTTTGTATACGATTTC+AGG | + | chr3.4:46215877-46215896 | MS.gene027213:intron | 40.0% | |
| GGTACAGTTCTTTCTTTGGT+TGG | - | chr3.4:46216311-46216330 | None:intergenic | 40.0% | |
| GTATACGATTTCAGGGCTAT+GGG | + | chr3.4:46215885-46215904 | MS.gene027213:intron | 40.0% | |
| TCAACTGGGAAGAATGACAA+GGG | + | chr3.4:46211757-46211776 | MS.gene027213:CDS | 40.0% | |
| TGTATACGATTTCAGGGCTA+TGG | + | chr3.4:46215884-46215903 | MS.gene027213:intron | 40.0% | |
| TTAAGACTCATGCTAGTGGA+CGG | + | chr3.4:46211594-46211613 | MS.gene027213:intron | 40.0% | |
| TTCTCAGCCAATTCCTCAAT+GGG | - | chr3.4:46211883-46211902 | None:intergenic | 40.0% | |
| TTTCTCAGCCAATTCCTCAA+TGG | - | chr3.4:46211884-46211903 | None:intergenic | 40.0% | |
| ! | AAACGAAAGCTCAGTGGTTT+TGG | + | chr3.4:46215319-46215338 | MS.gene027213:CDS | 40.0% |
| ! | AATCATTATTGGCTGACCTG+TGG | + | chr3.4:46216087-46216106 | MS.gene027213:intron | 40.0% |
| ! | AGTATTGAAGTCTCTCCTGA+TGG | + | chr3.4:46211247-46211266 | MS.gene027213:CDS | 40.0% |
| ! | CATTCTTCCCAGTTGATATC+TGG | - | chr3.4:46211753-46211772 | None:intergenic | 40.0% |
| ! | TGGGGTATCCTCTATATCTA+AGG | - | chr3.4:46211864-46211883 | None:intergenic | 40.0% |
| !! | AGTTTGTTGGATGGAAGAAC+AGG | - | chr3.4:46214213-46214232 | None:intergenic | 40.0% |
| !! | CCAAATGTTGACTTCTACTC+TGG | + | chr3.4:46215756-46215775 | MS.gene027213:CDS | 40.0% |
| !! | TCATTGAAGGTGTTAAAGCC+AGG | + | chr3.4:46215159-46215178 | MS.gene027213:CDS | 40.0% |
| !! | TCTTGTAACTGACTTGCAGA+AGG | - | chr3.4:46212584-46212603 | None:intergenic | 40.0% |
| !!! | GAGGAAGTGTTTTCCATTGT+TGG | + | chr3.4:46215397-46215416 | MS.gene027213:CDS | 40.0% |
| !!! | TTGTTTTTTGCAGTGGCAAC+CGG | + | chr3.4:46214637-46214656 | MS.gene027213:intron | 40.0% |
| AGCGTTCCTTTGACATTGGA+CGG | - | chr3.4:46211193-46211212 | None:intergenic | 45.0% | |
| AGGATACCCCATTGAGGAAT+TGG | + | chr3.4:46211873-46211892 | MS.gene027213:CDS | 45.0% | |
| CAACACTCAGCTTTACCACA+GGG | + | chr3.4:46212623-46212642 | MS.gene027213:CDS | 45.0% | |
| CCCAATGACCAACTAATCAG+GGG | - | chr3.4:46211629-46211648 | None:intergenic | 45.0% | |
| CCCAGTACGTTCATCAACAA+CGG | - | chr3.4:46211218-46211237 | None:intergenic | 45.0% | |
| CCTCAAGATGCACATCCTAT+GGG | + | chr3.4:46213238-46213257 | MS.gene027213:CDS | 45.0% | |
| CGATCTGCGATTCATAACAC+TGG | + | chr3.4:46213154-46213173 | MS.gene027213:intron | 45.0% | |
| CTATATGGACCTCTTCATGG+TGG | + | chr3.4:46214969-46214988 | MS.gene027213:CDS | 45.0% | |
| GAGATATGACACTTCCGGAA+AGG | - | chr3.4:46211911-46211930 | None:intergenic | 45.0% | |
| GCCCAATGACCAACTAATCA+GGG | - | chr3.4:46211630-46211649 | None:intergenic | 45.0% | |
| GCTCTATATGGACCTCTTCA+TGG | + | chr3.4:46214966-46214985 | MS.gene027213:CDS | 45.0% | |
| GGAAACCAGCCAAAAAGACT+CGG | - | chr3.4:46214821-46214840 | None:intergenic | 45.0% | |
| GGACTCAAACTTTATGACCC+TGG | + | chr3.4:46211778-46211797 | MS.gene027213:CDS | 45.0% | |
| GTATACACTGCTATTGCTGG+AGG | + | chr3.4:46214936-46214955 | MS.gene027213:CDS | 45.0% | |
| TCAACACTCAGCTTTACCAC+AGG | + | chr3.4:46212622-46212641 | MS.gene027213:CDS | 45.0% | |
| TCCAGGTATATGTTGGGGAA+TGG | + | chr3.4:46216270-46216289 | MS.gene027213:intron | 45.0% | |
| TCTAGGAAACGAAAGCTCAG+TGG | + | chr3.4:46215313-46215332 | MS.gene027213:intron | 45.0% | |
| TCTCAGCCAATTCCTCAATG+GGG | - | chr3.4:46211882-46211901 | None:intergenic | 45.0% | |
| TTGTTGGATGGAAGAACAGG+TGG | - | chr3.4:46214210-46214229 | None:intergenic | 45.0% | |
| ! | ACCGTTGTTGATGAACGTAC+TGG | + | chr3.4:46211214-46211233 | MS.gene027213:CDS | 45.0% |
| ! | CCCCTGATTAGTTGGTCATT+GGG | + | chr3.4:46211626-46211645 | MS.gene027213:intron | 45.0% |
| ! | CCGTTGTTGATGAACGTACT+GGG | + | chr3.4:46211215-46211234 | MS.gene027213:CDS | 45.0% |
| ! | TGATTAGTTGGTCATTGGGC+CGG | + | chr3.4:46211630-46211649 | MS.gene027213:intron | 45.0% |
| !! | AGCTTTACCACAGGGTGTTT+TGG | + | chr3.4:46212631-46212650 | MS.gene027213:CDS | 45.0% |
| !! | GTGTTACTTACTCTGAGAGC+AGG | - | chr3.4:46213316-46213335 | None:intergenic | 45.0% |
| !! | TTGTCGGTGTTACTTCCACT+CGG | - | chr3.4:46216332-46216351 | None:intergenic | 45.0% |
| !!! | AATTATGATTAAATATTTTT+TGG | + | chr3.4:46212403-46212422 | MS.gene027213:intron | 5.0% |
| !!! | ATTATGATTAAATATTTTTT+GGG | + | chr3.4:46212404-46212423 | MS.gene027213:intron | 5.0% |
| AAGCTCACCAAAACACCCTG+TGG | - | chr3.4:46212641-46212660 | None:intergenic | 50.0% | |
| CAAAGGATCTCGGCCAACAA+TGG | - | chr3.4:46215413-46215432 | None:intergenic | 50.0% | |
| CATAAAAGCAGGGCCATGTC+AGG | - | chr3.4:46212444-46212463 | None:intergenic | 50.0% | |
| CCAAGTATCCAGCCATACGA+GGG | - | chr3.4:46215947-46215966 | None:intergenic | 50.0% | |
| CCCATAGGATGTGCATCTTG+AGG | - | chr3.4:46213241-46213260 | None:intergenic | 50.0% | |
| CTGAGAGCAGGATTTGCATC+AGG | - | chr3.4:46213304-46213323 | None:intergenic | 50.0% | |
| CTGGATACTTGGCACATTGG+CGG | + | chr3.4:46215955-46215974 | MS.gene027213:CDS | 50.0% | |
| CTGGTTTCCTGCAGACAGTT+TGG | + | chr3.4:46214832-46214851 | MS.gene027213:intron | 50.0% | |
| GAGCTGTGAGGGTGGATAAA+CGG | - | chr3.4:46211090-46211109 | None:intergenic | 50.0% | |
| GCACGAGTTAGACGAGGATT+AGG | - | chr3.4:46214672-46214691 | None:intergenic | 50.0% | |
| GCCATTCCCCAACATATACC+TGG | - | chr3.4:46216274-46216293 | None:intergenic | 50.0% | |
| GCCTCAAGATGCACATCCTA+TGG | + | chr3.4:46213237-46213256 | MS.gene027213:CDS | 50.0% | |
| GGAAGTAACACCGACAAGCT+TGG | + | chr3.4:46216335-46216354 | MS.gene027213:CDS | 50.0% | |
| GGCCCAATGACCAACTAATC+AGG | - | chr3.4:46211631-46211650 | None:intergenic | 50.0% | |
| GGTGAGCGTTCCTTTGACAT+TGG | - | chr3.4:46211197-46211216 | None:intergenic | 50.0% | |
| GTTCCTTTGACATTGGACGG+TGG | - | chr3.4:46211190-46211209 | None:intergenic | 50.0% | |
| TCGTTAGCTCCACCATGAAG+AGG | - | chr3.4:46214981-46215000 | None:intergenic | 50.0% | |
| TCTCCACCGTCCAATGTCAA+AGG | + | chr3.4:46211184-46211203 | MS.gene027213:CDS | 50.0% | |
| TGGAGAGATCCCAGAAGAAG+CGG | - | chr3.4:46211170-46211189 | None:intergenic | 50.0% | |
| TGGATACTTGGCACATTGGC+GGG | + | chr3.4:46215956-46215975 | MS.gene027213:CDS | 50.0% | |
| TGGCCGAGATCCTTTGATTG+AGG | + | chr3.4:46215417-46215436 | MS.gene027213:CDS | 50.0% | |
| TGGCTGGATACTTGGCACAT+TGG | + | chr3.4:46215952-46215971 | MS.gene027213:CDS | 50.0% | |
| ! | ACTGCTATTGCTGGAGGTGT+TGG | + | chr3.4:46214942-46214961 | MS.gene027213:CDS | 50.0% |
| ! | GCCCCTGATTAGTTGGTCAT+TGG | + | chr3.4:46211625-46211644 | MS.gene027213:intron | 50.0% |
| ! | TCTTCATGGTGGAGCTAACG+AGG | + | chr3.4:46214980-46214999 | MS.gene027213:CDS | 50.0% |
| ! | TTTGCTATCCCTCGTATGGC+TGG | + | chr3.4:46215936-46215955 | MS.gene027213:CDS | 50.0% |
| !! | CTGACATGGCCCTGCTTTTA+TGG | + | chr3.4:46212442-46212461 | MS.gene027213:intron | 50.0% |
| !! | CTTCTCCGAGTCTTTTTGGC+TGG | + | chr3.4:46214813-46214832 | MS.gene027213:intron | 50.0% |
| !! | GGAGGTGTTGGAGCTCTATA+TGG | + | chr3.4:46214954-46214973 | MS.gene027213:CDS | 50.0% |
| !! | GGCTGAGAAAAGCACCTTTC+CGG | + | chr3.4:46211894-46211913 | MS.gene027213:CDS | 50.0% |
| AAGAAGCGGAGAGGTGGAGA+GGG | - | chr3.4:46211156-46211175 | None:intergenic | 55.0% | |
| AGATCCCAGAAGAAGCGGAG+AGG | - | chr3.4:46211165-46211184 | None:intergenic | 55.0% | |
| AGGAAGCAGGTGAGCTGTGA+GGG | - | chr3.4:46211101-46211120 | None:intergenic | 55.0% | |
| CCCTCGTATGGCTGGATACT+TGG | + | chr3.4:46215944-46215963 | MS.gene027213:CDS | 55.0% | |
| CTGTACGCCACCTTGCATCA+AGG | + | chr3.4:46214748-46214767 | MS.gene027213:CDS | 55.0% | |
| GCCAAGTATCCAGCCATACG+AGG | - | chr3.4:46215948-46215967 | None:intergenic | 55.0% | |
| TAGGAAGCAGGTGAGCTGTG+AGG | - | chr3.4:46211102-46211121 | None:intergenic | 55.0% | |
| TCCACCTCTCCGCTTCTTCT+GGG | + | chr3.4:46211158-46211177 | MS.gene027213:CDS | 55.0% | |
| TCCAGTGCACGAGTTAGACG+AGG | - | chr3.4:46214678-46214697 | None:intergenic | 55.0% | |
| TCCTCGTCTAACTCGTGCAC+TGG | + | chr3.4:46214674-46214693 | MS.gene027213:CDS | 55.0% | |
| TGATGCAAGGTGGCGTACAG+CGG | - | chr3.4:46214748-46214767 | None:intergenic | 55.0% | |
| ! | AGACTCATGCTAGTGGACGG+TGG | + | chr3.4:46211597-46211616 | MS.gene027213:intron | 55.0% |
| ! | ATGCTAGTGGACGGTGGGAT+TGG | + | chr3.4:46211603-46211622 | MS.gene027213:intron | 55.0% |
| ! | GACTCATGCTAGTGGACGGT+GGG | + | chr3.4:46211598-46211617 | MS.gene027213:intron | 55.0% |
| !! | GGGATTGGCCCCTGATTAGT+TGG | + | chr3.4:46211618-46211637 | MS.gene027213:intron | 55.0% |
| !! | TTGGCTTTGACGGTGCCATC+AGG | - | chr3.4:46211265-46211284 | None:intergenic | 55.0% |
| AAGCAGGTGAGCTGTGAGGG+TGG | - | chr3.4:46211098-46211117 | None:intergenic | 60.0% | |
| CGAAGATGCACGACGCTGCA+CGG | + | chr3.4:46211062-46211081 | MS.gene027213:CDS | 60.0% | |
| CTCCACCTCTCCGCTTCTTC+TGG | + | chr3.4:46211157-46211176 | MS.gene027213:CDS | 60.0% | |
| GAAGAAGCGGAGAGGTGGAG+AGG | - | chr3.4:46211157-46211176 | None:intergenic | 60.0% | |
| GCTTCAAAGAGGCGGCTTGC+TGG | + | chr3.4:46216377-46216396 | MS.gene027213:CDS | 60.0% | |
| GGTCATTGGGCCGGATATGC+TGG | + | chr3.4:46211639-46211658 | MS.gene027213:intron | 60.0% | |
| TCCCAGAAGAAGCGGAGAGG+TGG | - | chr3.4:46211162-46211181 | None:intergenic | 60.0% | |
| !! | AAGAGGCGGCTTGCTGGATC+TGG | + | chr3.4:46216383-46216402 | MS.gene027213:CDS | 60.0% |
| !! | AGAGGCGGCTTGCTGGATCT+GGG | + | chr3.4:46216384-46216403 | MS.gene027213:CDS | 60.0% |
| !! | AGGTGGTGGAGGTAGGAAGC+AGG | - | chr3.4:46211114-46211133 | None:intergenic | 60.0% |
| AAGCGGAGAGGTGGAGAGGG+TGG | - | chr3.4:46211153-46211172 | None:intergenic | 65.0% | |
| GGCACATTGGCGGGAGTCCT+TGG | + | chr3.4:46215965-46215984 | MS.gene027213:CDS | 65.0% | |
| CGGAGAGGTGGAGAGGGTGG+AGG | - | chr3.4:46211150-46211169 | None:intergenic | 70.0% | |
| GTGGAGAGGGTGGAGGAGCG+CGG | - | chr3.4:46211143-46211162 | None:intergenic | 70.0% | |
| !! | GCGGAGGAGGTGGTGGAGGT+AGG | - | chr3.4:46211121-46211140 | None:intergenic | 70.0% |
| ! | GAGAGGGTGGAGGAGCGCGG+CGG | - | chr3.4:46211140-46211159 | None:intergenic | 75.0% |
| ! | GAGCGCGGCGGAGGAGGTGG+TGG | - | chr3.4:46211128-46211147 | None:intergenic | 80.0% |
| !! | AGGGTGGAGGAGCGCGGCGG+AGG | - | chr3.4:46211137-46211156 | None:intergenic | 80.0% |
| !! | CGCGGCGGAGGAGGTGGTGG+AGG | - | chr3.4:46211125-46211144 | None:intergenic | 80.0% |
| !! | GAGGAGCGCGGCGGAGGAGG+TGG | - | chr3.4:46211131-46211150 | None:intergenic | 80.0% |
| !! | GTGGAGGAGCGCGGCGGAGG+AGG | - | chr3.4:46211134-46211153 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 46211037 | 46216412 | 46211037 | ID=MS.gene027213 |
| chr3.4 | mRNA | 46211037 | 46216412 | 46211037 | ID=MS.gene027213.t1;Parent=MS.gene027213 |
| chr3.4 | exon | 46211037 | 46211297 | 46211037 | ID=MS.gene027213.t1.exon1;Parent=MS.gene027213.t1 |
| chr3.4 | CDS | 46211037 | 46211297 | 46211037 | ID=cds.MS.gene027213.t1;Parent=MS.gene027213.t1 |
| chr3.4 | exon | 46211754 | 46211934 | 46211754 | ID=MS.gene027213.t1.exon2;Parent=MS.gene027213.t1 |
| chr3.4 | CDS | 46211754 | 46211934 | 46211754 | ID=cds.MS.gene027213.t1;Parent=MS.gene027213.t1 |
| chr3.4 | exon | 46212567 | 46212652 | 46212567 | ID=MS.gene027213.t1.exon3;Parent=MS.gene027213.t1 |
| chr3.4 | CDS | 46212567 | 46212652 | 46212567 | ID=cds.MS.gene027213.t1;Parent=MS.gene027213.t1 |
| chr3.4 | exon | 46213220 | 46213324 | 46213220 | ID=MS.gene027213.t1.exon4;Parent=MS.gene027213.t1 |
| chr3.4 | CDS | 46213220 | 46213324 | 46213220 | ID=cds.MS.gene027213.t1;Parent=MS.gene027213.t1 |
| chr3.4 | exon | 46213950 | 46214012 | 46213950 | ID=MS.gene027213.t1.exon5;Parent=MS.gene027213.t1 |
| chr3.4 | CDS | 46213950 | 46214012 | 46213950 | ID=cds.MS.gene027213.t1;Parent=MS.gene027213.t1 |
| chr3.4 | exon | 46214162 | 46214271 | 46214162 | ID=MS.gene027213.t1.exon6;Parent=MS.gene027213.t1 |
| chr3.4 | CDS | 46214162 | 46214271 | 46214162 | ID=cds.MS.gene027213.t1;Parent=MS.gene027213.t1 |
| chr3.4 | exon | 46214650 | 46214769 | 46214650 | ID=MS.gene027213.t1.exon7;Parent=MS.gene027213.t1 |
| chr3.4 | CDS | 46214650 | 46214769 | 46214650 | ID=cds.MS.gene027213.t1;Parent=MS.gene027213.t1 |
| chr3.4 | exon | 46214926 | 46215001 | 46214926 | ID=MS.gene027213.t1.exon8;Parent=MS.gene027213.t1 |
| chr3.4 | CDS | 46214926 | 46215001 | 46214926 | ID=cds.MS.gene027213.t1;Parent=MS.gene027213.t1 |
| chr3.4 | exon | 46215107 | 46215180 | 46215107 | ID=MS.gene027213.t1.exon9;Parent=MS.gene027213.t1 |
| chr3.4 | CDS | 46215107 | 46215180 | 46215107 | ID=cds.MS.gene027213.t1;Parent=MS.gene027213.t1 |
| chr3.4 | exon | 46215318 | 46215438 | 46215318 | ID=MS.gene027213.t1.exon10;Parent=MS.gene027213.t1 |
| chr3.4 | CDS | 46215318 | 46215438 | 46215318 | ID=cds.MS.gene027213.t1;Parent=MS.gene027213.t1 |
| chr3.4 | exon | 46215693 | 46215790 | 46215693 | ID=MS.gene027213.t1.exon11;Parent=MS.gene027213.t1 |
| chr3.4 | CDS | 46215693 | 46215790 | 46215693 | ID=cds.MS.gene027213.t1;Parent=MS.gene027213.t1 |
| chr3.4 | exon | 46215899 | 46216022 | 46215899 | ID=MS.gene027213.t1.exon12;Parent=MS.gene027213.t1 |
| chr3.4 | CDS | 46215899 | 46216022 | 46215899 | ID=cds.MS.gene027213.t1;Parent=MS.gene027213.t1 |
| chr3.4 | exon | 46216275 | 46216412 | 46216275 | ID=MS.gene027213.t1.exon13;Parent=MS.gene027213.t1 |
| chr3.4 | CDS | 46216275 | 46216412 | 46216275 | ID=cds.MS.gene027213.t1;Parent=MS.gene027213.t1 |
| Gene Sequence |
| Protein sequence |
