Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030781.t1 | XP_013446835.1 | 99.1 | 647 | 6 | 0 | 1 | 647 | 43 | 689 | 0.00E+00 | 1316.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030781.t1 | O65201 | 86.7 | 646 | 85 | 1 | 2 | 646 | 47 | 692 | 0.0e+00 | 1168.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030781.t1 | A0A072TTY6 | 99.1 | 647 | 6 | 0 | 1 | 647 | 43 | 689 | 0.0e+00 | 1316.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030781.t1 | MTR_8g090375 | 99.073 | 647 | 6 | 0 | 1 | 647 | 43 | 689 | 0.0 | 1343 |
| MS.gene030781.t1 | MTR_4g079290 | 37.815 | 595 | 331 | 12 | 49 | 631 | 97 | 664 | 1.91e-119 | 371 |
| MS.gene030781.t1 | MTR_5g012920 | 35.305 | 541 | 317 | 12 | 108 | 635 | 103 | 623 | 8.24e-88 | 288 |
| MS.gene030781.t1 | MTR_4g100640 | 35.250 | 539 | 320 | 13 | 108 | 635 | 103 | 623 | 6.76e-87 | 285 |
| MS.gene030781.t1 | MTR_4g100640 | 36.902 | 439 | 252 | 10 | 116 | 547 | 114 | 534 | 2.09e-74 | 248 |
| MS.gene030781.t1 | MTR_4g091440 | 83.529 | 85 | 9 | 1 | 555 | 639 | 11 | 90 | 4.92e-41 | 145 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030781.t1 | AT5G65110 | 86.687 | 646 | 85 | 1 | 2 | 646 | 47 | 692 | 0.0 | 1194 |
| MS.gene030781.t1 | AT5G65110 | 86.555 | 595 | 79 | 1 | 2 | 595 | 47 | 641 | 0.0 | 1100 |
| MS.gene030781.t1 | AT1G06290 | 37.099 | 593 | 334 | 12 | 51 | 631 | 98 | 663 | 1.32e-113 | 355 |
| MS.gene030781.t1 | AT1G06310 | 36.425 | 593 | 338 | 12 | 51 | 631 | 98 | 663 | 3.13e-111 | 349 |
| MS.gene030781.t1 | AT2G35690 | 34.280 | 528 | 321 | 10 | 116 | 635 | 114 | 623 | 8.86e-81 | 269 |
| MS.gene030781.t1 | AT4G16760 | 34.137 | 539 | 326 | 12 | 108 | 635 | 90 | 610 | 2.09e-80 | 268 |
| MS.gene030781.t1 | AT4G16760 | 34.137 | 539 | 326 | 12 | 108 | 635 | 103 | 623 | 2.84e-80 | 268 |
Find 169 sgRNAs with CRISPR-Local
Find 298 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGCATCCAATTGAAATTT+AGG | 0.172021 | 4.3:+9975981 | None:intergenic |
| TTTATGCTCTTGATCGAATA+TGG | 0.214273 | 4.3:-9975561 | MS.gene030781:CDS |
| GGGTGGTTCTGTAATCAATT+TGG | 0.224713 | 4.3:-9978520 | MS.gene030781:CDS |
| CAATTCTCGGTGATTATCTT+TGG | 0.226333 | 4.3:+9978789 | None:intergenic |
| ATGCTTTCATTGTTCCAATA+AGG | 0.244174 | 4.3:-9977409 | MS.gene030781:CDS |
| TCTCTACTTCGTCAGCAATT+TGG | 0.245338 | 4.3:-9977092 | MS.gene030781:CDS |
| GTTTATTCTATGCAGTCTTT+GGG | 0.259624 | 4.3:-9978541 | MS.gene030781:intron |
| CCTTCCCACCTAGCAGTAAC+TGG | 0.283092 | 4.3:+9976023 | None:intergenic |
| TGGGTCTTCATATCCCTTAT+TGG | 0.284324 | 4.3:+9977395 | None:intergenic |
| CATCTCCAAAACGGTTTAGA+AGG | 0.308919 | 4.3:+9977264 | None:intergenic |
| TGCTTTCATTGTTCCAATAA+GGG | 0.312257 | 4.3:-9977408 | MS.gene030781:CDS |
| CACCTAGCAGTAACTGGATT+TGG | 0.315018 | 4.3:+9976029 | None:intergenic |
| TTAGATATTCTGACAGTTTG+TGG | 0.323950 | 4.3:+9974933 | None:intergenic |
| CTATGATGGTATTGATAACT+TGG | 0.333947 | 4.3:-9978472 | MS.gene030781:CDS |
| GACAACCTTCTAAACCGTTT+TGG | 0.334424 | 4.3:-9977269 | MS.gene030781:CDS |
| TTTATGTACCTTGGCTTTGT+TGG | 0.336573 | 4.3:+9975498 | None:intergenic |
| TTATGTACCTTGGCTTTGTT+GGG | 0.344008 | 4.3:+9975499 | None:intergenic |
| TATCTTTGGAAATTTCAATA+GGG | 0.356130 | 4.3:+9978803 | None:intergenic |
| GGTGGTTCTGTAATCAATTT+GGG | 0.359274 | 4.3:-9978519 | MS.gene030781:CDS |
| TCAAAATGGGTGTTCAATAT+AGG | 0.359325 | 4.3:-9978639 | MS.gene030781:intron |
| TGTAAGCGTCCTCAAGGTTT+CGG | 0.365459 | 4.3:-9977135 | MS.gene030781:CDS |
| AAGACCCATCAAACACTTCC+TGG | 0.370749 | 4.3:-9977380 | MS.gene030781:CDS |
| ATTGTGTATGAATCAGCTTT+TGG | 0.372478 | 4.3:-9978770 | MS.gene030781:CDS |
| TTATCTTTGGAAATTTCAAT+AGG | 0.377781 | 4.3:+9978802 | None:intergenic |
| TTGGCTCTTGTTAGAGAAGC+TGG | 0.387447 | 4.3:-9978751 | MS.gene030781:CDS |
| CAACACAGTTCTTCTTCAAC+AGG | 0.389995 | 4.3:-9976745 | MS.gene030781:intron |
| AGCGGTTCGGTGCAACTCTC+GGG | 0.390305 | 4.3:-9977196 | MS.gene030781:CDS |
| TCCCTCCTTGGAACTTTCTC+TGG | 0.394208 | 4.3:+9976108 | None:intergenic |
| GCAGCTTGAGCGCTTGGATC+AGG | 0.395154 | 4.3:+9975604 | None:intergenic |
| GCTGATTCATACACAATTCT+CGG | 0.398942 | 4.3:+9978776 | None:intergenic |
| TTCAGAGCAGCTTGAGCGCT+TGG | 0.401209 | 4.3:+9975598 | None:intergenic |
| CATTTGATAGCACCATCATT+TGG | 0.402058 | 4.3:+9977533 | None:intergenic |
| ACGGGATCCTAAATTTCAAT+TGG | 0.403971 | 4.3:-9975988 | MS.gene030781:CDS |
| CTCTCAGTACACACAATTTG+TGG | 0.416549 | 4.3:-9974813 | MS.gene030781:CDS |
| TCAAAACCACTCGGGGACTT+TGG | 0.417831 | 4.3:-9975810 | MS.gene030781:CDS |
| CCTTTGCAATATTCCTCACT+TGG | 0.418205 | 4.3:+9974906 | None:intergenic |
| TGTTGTCTCCTTCAAATGTC+TGG | 0.418618 | 4.3:+9976763 | None:intergenic |
| GGCCTCAATGGTGTTGATAA+TGG | 0.420530 | 4.3:-9977326 | MS.gene030781:CDS |
| CAATTCCAGGAAGTGTTTGA+TGG | 0.423634 | 4.3:+9977375 | None:intergenic |
| CTGGTATTGTTTCAAAAGAT+CGG | 0.429824 | 4.3:+9976127 | None:intergenic |
| ATTATTGATACTCCAAATGA+TGG | 0.432472 | 4.3:-9977545 | MS.gene030781:CDS |
| CAATCATGTATCTCAATTCC+AGG | 0.438247 | 4.3:+9977362 | None:intergenic |
| GAAATTTAGGATCCCGTAGA+TGG | 0.439969 | 4.3:+9975994 | None:intergenic |
| GCTCCTGATTGCTTGGCAAT+AGG | 0.442770 | 4.3:+9974839 | None:intergenic |
| ATGGTTATGCTGCTGTAAAT+CGG | 0.444281 | 4.3:-9976818 | MS.gene030781:CDS |
| ACAGATGCTGAGTGACTTTG+CGG | 0.444457 | 4.3:+9976860 | None:intergenic |
| TTTGGAGATGTTTCTCGTGA+TGG | 0.445538 | 4.3:-9977251 | MS.gene030781:CDS |
| TATGTCGCTTGGAATCAAAA+TGG | 0.447452 | 4.3:-9978653 | MS.gene030781:CDS |
| GCACCTATTGCCAAGCAATC+AGG | 0.452909 | 4.3:-9974842 | MS.gene030781:CDS |
| AAGCGGTTCGGTGCAACTCT+CGG | 0.453349 | 4.3:-9977197 | MS.gene030781:CDS |
| TCTCAGTACACACAATTTGT+GGG | 0.455819 | 4.3:-9974812 | MS.gene030781:CDS |
| GGTGCCCTTGTTACATGATC+GGG | 0.458693 | 4.3:+9974860 | None:intergenic |
| CCTTCGGTTAATAAGCGGTT+CGG | 0.458831 | 4.3:-9977209 | MS.gene030781:CDS |
| TGCAAAAGGAGTTTCTGATA+TGG | 0.461080 | 4.3:-9977438 | MS.gene030781:CDS |
| GCAACTCTCGGGGAACTTGT+TGG | 0.464445 | 4.3:-9977185 | MS.gene030781:CDS |
| CGGGGAACTTGTTGGTGGTA+GGG | 0.466679 | 4.3:-9977177 | MS.gene030781:CDS |
| TAGTCGAGAATCGTTACTTC+GGG | 0.467616 | 4.3:+9977056 | None:intergenic |
| TGCTCTCTCGGCAGGTCTGA+AGG | 0.474202 | 4.3:-9976901 | MS.gene030781:CDS |
| TCCTCTCATGTAACCGGAGA+GGG | 0.480165 | 4.3:+9978888 | None:intergenic |
| ATAAACAGGTTCAAATGTGC+AGG | 0.483681 | 4.3:-9977612 | MS.gene030781:intron |
| GATGTCCATGCTCTCTCGGC+AGG | 0.488038 | 4.3:-9976909 | MS.gene030781:CDS |
| TATGCTGCTGTAAATCGGTT+TGG | 0.492200 | 4.3:-9976813 | MS.gene030781:CDS |
| TTACCTAATTATGATGCAAA+AGG | 0.492396 | 4.3:-9977452 | MS.gene030781:CDS |
| TTGGAGATGTTTCTCGTGAT+GGG | 0.492414 | 4.3:-9977250 | MS.gene030781:CDS |
| GTACACAAGTACGCTTCCTT+CGG | 0.492471 | 4.3:-9977225 | MS.gene030781:CDS |
| CATGATTGTGGTCATAAAGT+TGG | 0.493032 | 4.3:-9977347 | MS.gene030781:CDS |
| TCGGGGAACTTGTTGGTGGT+AGG | 0.493211 | 4.3:-9977178 | MS.gene030781:CDS |
| ATCTTTGGAAATTTCAATAG+GGG | 0.494569 | 4.3:+9978804 | None:intergenic |
| AAAATAGCAAAATACTTAGC+AGG | 0.495694 | 4.3:+9978697 | None:intergenic |
| GGTCATAAAGTTGGCCTCAA+TGG | 0.500739 | 4.3:-9977338 | MS.gene030781:CDS |
| GGGAAGGTGAAGACCATCTA+CGG | 0.502020 | 4.3:-9976007 | MS.gene030781:CDS |
| GTTACTTCGGGTTGGTCTCG+AGG | 0.502846 | 4.3:+9977068 | None:intergenic |
| TCAATAGGGGTTAGAAGATG+TGG | 0.503081 | 4.3:+9978817 | None:intergenic |
| TAAGCTTATGCTGATGAGAC+TGG | 0.505882 | 4.3:+9977033 | None:intergenic |
| CTACCGTAATGTTGATTATG+TGG | 0.509887 | 4.3:-9975524 | MS.gene030781:CDS |
| TGCAGATGTCCATGCTCTCT+CGG | 0.513801 | 4.3:-9976913 | MS.gene030781:CDS |
| AGAATATCTGATGGCAATAG+TGG | 0.520586 | 4.3:+9977112 | None:intergenic |
| AGAGTAAGCTCCTGATTGCT+TGG | 0.521456 | 4.3:+9974832 | None:intergenic |
| CATAAGGACAAGTACTATGA+TGG | 0.522129 | 4.3:-9978486 | MS.gene030781:CDS |
| GCATAAGCTTATGCCCATGC+TGG | 0.522352 | 4.3:-9977021 | MS.gene030781:CDS |
| GAACTTGTTGGTGGTAGGGT+AGG | 0.522927 | 4.3:-9977173 | MS.gene030781:CDS |
| CGAAAGCACTCAAAACCACT+CGG | 0.525809 | 4.3:-9975819 | MS.gene030781:CDS |
| TTTGGGAACACAGAAACATA+AGG | 0.529122 | 4.3:-9978502 | MS.gene030781:CDS |
| CACTCGGGGACTTTGGTGCA+TGG | 0.531305 | 4.3:-9975803 | MS.gene030781:CDS |
| TCAGACCTGCCGAGAGAGCA+TGG | 0.532410 | 4.3:+9976904 | None:intergenic |
| CAAAGTCACTCAGCATCTGT+AGG | 0.533032 | 4.3:-9976857 | MS.gene030781:CDS |
| TGCATAAGTTGAAGCCAGCA+TGG | 0.533986 | 4.3:+9977007 | None:intergenic |
| TTCTTCTGTAAGCGTCCTCA+AGG | 0.534074 | 4.3:-9977141 | MS.gene030781:CDS |
| AATTCCAGGAAGTGTTTGAT+GGG | 0.535427 | 4.3:+9977376 | None:intergenic |
| AGCATAACCATGGCCTCCAC+AGG | 0.535510 | 4.3:+9976830 | None:intergenic |
| AGGGAAGCCTGTGGAGGCCA+TGG | 0.536243 | 4.3:-9976837 | MS.gene030781:CDS |
| GAGCCACATAATCAACATTA+CGG | 0.536866 | 4.3:+9975521 | None:intergenic |
| AGGTGCCCTTGTTACATGAT+CGG | 0.538269 | 4.3:+9974859 | None:intergenic |
| CCAGTTACTGCTAGGTGGGA+AGG | 0.538816 | 4.3:-9976023 | MS.gene030781:CDS |
| CTGTGACAGATAAGTACTCA+TGG | 0.539434 | 4.3:+9976052 | None:intergenic |
| CAAAGGTGGCGAGAGTTTGA+AGG | 0.542136 | 4.3:+9977588 | None:intergenic |
| TCACTGCTAAAGTCCCTCCT+TGG | 0.543944 | 4.3:+9976096 | None:intergenic |
| GCAAAAGGAGTTTCTGATAT+GGG | 0.548158 | 4.3:-9977437 | MS.gene030781:CDS |
| CACGAGAAACATCTCCAAAA+CGG | 0.548477 | 4.3:+9977255 | None:intergenic |
| ATTCTATGCAGTCTTTGGGG+TGG | 0.550468 | 4.3:-9978537 | MS.gene030781:intron |
| ATAATAAATTCATCGGTGAT+CGG | 0.551438 | 4.3:+9977563 | None:intergenic |
| TATGAAGTAATCTAGACGTT+CGG | 0.553324 | 4.3:+9975859 | None:intergenic |
| ATGTCGCTTGGAATCAAAAT+GGG | 0.554551 | 4.3:-9978652 | MS.gene030781:CDS |
| TTTCTCCACTAAGTTTGTTG+TGG | 0.555388 | 4.3:+9976974 | None:intergenic |
| GTAGTCGAGAATCGTTACTT+CGG | 0.559361 | 4.3:+9977055 | None:intergenic |
| GGTAGTGTTGATATGTCGCT+TGG | 0.560567 | 4.3:-9978664 | MS.gene030781:CDS |
| TTCATCGGTGATCGGATCAA+AGG | 0.561998 | 4.3:+9977571 | None:intergenic |
| ATTGGCAATGCCGCCATGCA+TGG | 0.563361 | 4.3:-9977506 | MS.gene030781:CDS |
| GATCGAATATGGAATGACAT+TGG | 0.564847 | 4.3:-9975550 | MS.gene030781:CDS |
| CGAGAATCGTTACTTCGGGT+TGG | 0.565234 | 4.3:+9977060 | None:intergenic |
| GGTGCTATCAAATGGTGGAT+TGG | 0.567024 | 4.3:-9977524 | MS.gene030781:CDS |
| TTTATTCTATGCAGTCTTTG+GGG | 0.568032 | 4.3:-9978540 | MS.gene030781:intron |
| CGCTTCCTTCGGTTAATAAG+CGG | 0.569278 | 4.3:-9977214 | MS.gene030781:CDS |
| TCCCTCTCCGGTTACATGAG+AGG | 0.572675 | 4.3:-9978889 | MS.gene030781:CDS |
| ATCAAGAGCATAAAGATCGC+AGG | 0.572870 | 4.3:+9975570 | None:intergenic |
| AAATCCAGTTACTGCTAGGT+GGG | 0.573812 | 4.3:-9976027 | MS.gene030781:CDS |
| GTGGACACAAATTCCCTCTC+CGG | 0.574120 | 4.3:-9978901 | MS.gene030781:CDS |
| GAAAGCACTCAAAACCACTC+GGG | 0.574745 | 4.3:-9975818 | MS.gene030781:CDS |
| TCGGTCATAGCAAAACAACC+TGG | 0.575066 | 4.3:+9978444 | None:intergenic |
| AAAGTCACTCAGCATCTGTA+GGG | 0.575237 | 4.3:-9976856 | MS.gene030781:CDS |
| AGTATCAATAATAAATTCAT+CGG | 0.575429 | 4.3:+9977556 | None:intergenic |
| AGATGGAAAATTGCAGTCGC+GGG | 0.576755 | 4.3:-9978936 | MS.gene030781:CDS |
| CAAATGATGGTGCTATCAAA+TGG | 0.582753 | 4.3:-9977532 | MS.gene030781:CDS |
| GAAATTACCATGGTGAAGCT+CGG | 0.587206 | 4.3:+9978425 | None:intergenic |
| CAAATCCAGTTACTGCTAGG+TGG | 0.589069 | 4.3:-9976028 | MS.gene030781:CDS |
| CCAAGTGAGGAATATTGCAA+AGG | 0.590762 | 4.3:-9974906 | MS.gene030781:CDS |
| AATATCTAAGTTTCCAAGTG+AGG | 0.594631 | 4.3:-9974919 | MS.gene030781:CDS |
| GGAAGGTGAAGACCATCTAC+GGG | 0.594722 | 4.3:-9976006 | MS.gene030781:CDS |
| ATTGATAACTTGGATTACCC+AGG | 0.595258 | 4.3:-9978462 | MS.gene030781:CDS |
| ATCTTCCCGATCATGTAACA+AGG | 0.597775 | 4.3:-9974865 | MS.gene030781:CDS |
| CTCCATTATCAACACCATTG+AGG | 0.603969 | 4.3:+9977324 | None:intergenic |
| GCATAAGTTGAAGCCAGCAT+GGG | 0.604077 | 4.3:+9977008 | None:intergenic |
| CGCTTACAGAAGAATATGCA+AGG | 0.604155 | 4.3:+9977150 | None:intergenic |
| ACTCTCGGGGAACTTGTTGG+TGG | 0.607843 | 4.3:-9977182 | MS.gene030781:CDS |
| CACATAATCAACATTACGGT+AGG | 0.614344 | 4.3:+9975525 | None:intergenic |
| TAAATCGGTTTGGTTCCTTG+AGG | 0.616748 | 4.3:-9976803 | MS.gene030781:CDS |
| ATCGGTGATCGGATCAAAGG+TGG | 0.617655 | 4.3:+9977574 | None:intergenic |
| TGTGGCAAACTTGCCATGCA+TGG | 0.619619 | 4.3:+9977493 | None:intergenic |
| GAGATGGAAAATTGCAGTCG+CGG | 0.623955 | 4.3:-9978937 | MS.gene030781:CDS |
| AATGTCATGATCATTCCTCA+AGG | 0.624425 | 4.3:+9976788 | None:intergenic |
| TGGAGCTCTTAGATTCCGCT+CGG | 0.628031 | 4.3:-9977306 | MS.gene030781:CDS |
| CAATAGTGGCCGAAACCTTG+AGG | 0.628582 | 4.3:+9977126 | None:intergenic |
| AGCCAAATCCAGTTACTGCT+AGG | 0.628605 | 4.3:-9976031 | MS.gene030781:CDS |
| CGGTCATAGCAAAACAACCT+GGG | 0.629589 | 4.3:+9978445 | None:intergenic |
| ATCTGTAGGGAAGCCTGTGG+AGG | 0.630281 | 4.3:-9976843 | MS.gene030781:CDS |
| TCATTAACAACATAATGAAG+AGG | 0.630936 | 4.3:+9978721 | None:intergenic |
| GCGGTTCGGTGCAACTCTCG+GGG | 0.635090 | 4.3:-9977195 | MS.gene030781:CDS |
| ACCAGAGAAAGTTCCAAGGA+GGG | 0.638300 | 4.3:-9976109 | MS.gene030781:CDS |
| AAAGCACTCAAAACCACTCG+GGG | 0.639876 | 4.3:-9975817 | MS.gene030781:CDS |
| TAAACAGGTTCAAATGTGCA+GGG | 0.642404 | 4.3:-9977611 | MS.gene030781:intron |
| CGGTTTAGAAGGTTGTCTCG+AGG | 0.643754 | 4.3:+9977275 | None:intergenic |
| GCTATGACCGAGCTTCACCA+TGG | 0.647722 | 4.3:-9978432 | MS.gene030781:intron |
| GAGGGACTTTAGCAGTGACA+TGG | 0.650482 | 4.3:-9976091 | MS.gene030781:CDS |
| TTCCTCTCATGTAACCGGAG+AGG | 0.655151 | 4.3:+9978887 | None:intergenic |
| CCGAACCGCTTATTAACCGA+AGG | 0.655393 | 4.3:+9977209 | None:intergenic |
| CAATACCAGAGAAAGTTCCA+AGG | 0.658899 | 4.3:-9976113 | MS.gene030781:CDS |
| AATTCATTGAAGCTGTGCAG+AGG | 0.660461 | 4.3:-9975716 | MS.gene030781:intron |
| TGTGGCTCCCAACAAAGCCA+AGG | 0.662996 | 4.3:-9975506 | MS.gene030781:intron |
| ACGAAGTAGAGAATATCTGA+TGG | 0.663385 | 4.3:+9977103 | None:intergenic |
| GATTTACAGCAGCATAACCA+TGG | 0.669211 | 4.3:+9976820 | None:intergenic |
| TCGCGGGAAGAAATTAATCG+TGG | 0.674882 | 4.3:-9978920 | MS.gene030781:CDS |
| CTCGAGGAATTCTCACCGAG+CGG | 0.676358 | 4.3:+9977291 | None:intergenic |
| ATGATGGTGCTATCAAATGG+TGG | 0.677203 | 4.3:-9977529 | MS.gene030781:CDS |
| GGAATTGAGATACATGATTG+TGG | 0.680398 | 4.3:-9977359 | MS.gene030781:CDS |
| GGCAAACTTGCCATGCATGG+CGG | 0.690153 | 4.3:+9977496 | None:intergenic |
| AGCATCTGTAGGGAAGCCTG+TGG | 0.690374 | 4.3:-9976846 | MS.gene030781:CDS |
| TACCAGAGAAAGTTCCAAGG+AGG | 0.691237 | 4.3:-9976110 | MS.gene030781:CDS |
| CATGCACCAAAGTCCCCGAG+TGG | 0.710764 | 4.3:+9975804 | None:intergenic |
| TCTTCCCGATCATGTAACAA+GGG | 0.717458 | 4.3:-9974864 | MS.gene030781:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTAAATAATAGATAAATAA+AGG | - | chr4.3:9977244-9977263 | MS.gene030781:CDS | 10.0% |
| !!! | GTTTTTTTTTTTTTTCATTT+GGG | - | chr4.3:9975123-9975142 | MS.gene030781:intron | 10.0% |
| !!! | TATTTGTTTTTATCTTAATT+GGG | - | chr4.3:9976023-9976042 | MS.gene030781:CDS | 10.0% |
| !!! | TGTTTTTTTTTTTTTTCATT+TGG | - | chr4.3:9975122-9975141 | MS.gene030781:intron | 10.0% |
| !! | AGTATCAATAATAAATTCAT+CGG | + | chr4.3:9976183-9976202 | None:intergenic | 15.0% |
| !!! | ATGAAATCTTTTGAAAATTT+TGG | + | chr4.3:9977387-9977406 | None:intergenic | 15.0% |
| !!! | CTATTTGTTTTTATCTTAAT+TGG | - | chr4.3:9976022-9976041 | MS.gene030781:CDS | 15.0% |
| !!! | TATAATTTTTTTGTTTAGCA+AGG | + | chr4.3:9977150-9977169 | None:intergenic | 15.0% |
| !! | ATCAATTATATGTTAGAGAA+AGG | + | chr4.3:9978058-9978077 | None:intergenic | 20.0% |
| !! | TCGTGTTCATAAAAATATAA+AGG | - | chr4.3:9975801-9975820 | MS.gene030781:CDS | 20.0% |
| !! | TGTGAGATAAAATTCAAAAT+GGG | - | chr4.3:9975928-9975947 | MS.gene030781:intron | 20.0% |
| !! | TTGTGAGATAAAATTCAAAA+TGG | - | chr4.3:9975927-9975946 | MS.gene030781:intron | 20.0% |
| !!! | AAGAAATTTTTTATGTACCT+TGG | + | chr4.3:9978250-9978269 | None:intergenic | 20.0% |
| !!! | AATTTTTCCTTTACAAATGA+AGG | - | chr4.3:9977580-9977599 | MS.gene030781:CDS | 20.0% |
| !!! | ATAAAAATATAAAGGCATGT+GGG | - | chr4.3:9975809-9975828 | MS.gene030781:CDS | 20.0% |
| !!! | TATCTTTGGAAATTTCAATA+GGG | + | chr4.3:9974936-9974955 | None:intergenic | 20.0% |
| !!! | TCATTGATTTATGTATTCAT+TGG | + | chr4.3:9978318-9978337 | None:intergenic | 20.0% |
| !!! | TGAAAATTTTGGATTTCATT+TGG | + | chr4.3:9977376-9977395 | None:intergenic | 20.0% |
| !!! | TTATCTTTGGAAATTTCAAT+AGG | + | chr4.3:9974937-9974956 | None:intergenic | 20.0% |
| !!! | TTTTGTTTTGTTTTGATGAA+TGG | - | chr4.3:9975173-9975192 | MS.gene030781:intron | 20.0% |
| ! | AAAATAGCAAAATACTTAGC+AGG | + | chr4.3:9975042-9975061 | None:intergenic | 25.0% |
| ! | AAAGCTAATAACTTCTATGA+GGG | - | chr4.3:9978371-9978390 | MS.gene030781:intron | 25.0% |
| ! | AACTATTACTAAAGCTTCTT+TGG | - | chr4.3:9977331-9977350 | MS.gene030781:CDS | 25.0% |
| ! | ATAATAAATTCATCGGTGAT+CGG | + | chr4.3:9976176-9976195 | None:intergenic | 25.0% |
| ! | ATTATTGATACTCCAAATGA+TGG | - | chr4.3:9976191-9976210 | MS.gene030781:intron | 25.0% |
| ! | CAACTATTAATTTATGACTG+TGG | - | chr4.3:9977108-9977127 | MS.gene030781:CDS | 25.0% |
| ! | GCTTTAGTAATAGTTAATCT+TGG | + | chr4.3:9977326-9977345 | None:intergenic | 25.0% |
| ! | GTTAATCTTGGAATATATCA+AGG | + | chr4.3:9977314-9977333 | None:intergenic | 25.0% |
| ! | TATCTTAATTGGGTTTCTAT+TGG | - | chr4.3:9976033-9976052 | MS.gene030781:CDS | 25.0% |
| ! | TCATTAACAACATAATGAAG+AGG | + | chr4.3:9975018-9975037 | None:intergenic | 25.0% |
| ! | TTACCTAATTATGATGCAAA+AGG | - | chr4.3:9976284-9976303 | MS.gene030781:intron | 25.0% |
| ! | TTTGGTAGAGTAATTTAAAG+CGG | - | chr4.3:9975880-9975899 | MS.gene030781:intron | 25.0% |
| !! | AAAGCATCCAATTGAAATTT+AGG | + | chr4.3:9977758-9977777 | None:intergenic | 25.0% |
| !! | AATGGTATTTAGAATCAAAG+GGG | + | chr4.3:9977287-9977306 | None:intergenic | 25.0% |
| !! | AATTTTATCTCACAATCAGA+TGG | + | chr4.3:9975922-9975941 | None:intergenic | 25.0% |
| !! | AATTTTGTGAAGTGAAAAGT+GGG | - | chr4.3:9975778-9975797 | MS.gene030781:CDS | 25.0% |
| !! | AGAATGGTATTTAGAATCAA+AGG | + | chr4.3:9977289-9977308 | None:intergenic | 25.0% |
| !! | ATCTTTGGAAATTTCAATAG+GGG | + | chr4.3:9974935-9974954 | None:intergenic | 25.0% |
| !! | CATAAAAATATAAAGGCATG+TGG | - | chr4.3:9975808-9975827 | MS.gene030781:CDS | 25.0% |
| !! | GAATGGTATTTAGAATCAAA+GGG | + | chr4.3:9977288-9977307 | None:intergenic | 25.0% |
| !! | TAAAAATATAAAGGCATGTG+GGG | - | chr4.3:9975810-9975829 | MS.gene030781:CDS | 25.0% |
| !!! | CAATTTTCCCAATTTTAACA+CGG | - | chr4.3:9978089-9978108 | MS.gene030781:intron | 25.0% |
| !!! | TGCTAAGTATTTTGCTATTT+TGG | - | chr4.3:9975041-9975060 | MS.gene030781:intron | 25.0% |
| !!! | TTTCTTTTTTGTGCATAAAC+AGG | - | chr4.3:9976110-9976129 | MS.gene030781:CDS | 25.0% |
| AAATAGGCCGTGTTAAAATT+GGG | + | chr4.3:9978099-9978118 | None:intergenic | 30.0% | |
| AAGGTGTAGATTATAGAACA+AGG | + | chr4.3:9977179-9977198 | None:intergenic | 30.0% | |
| AATATCTAAGTTTCCAAGTG+AGG | - | chr4.3:9978817-9978836 | MS.gene030781:CDS | 30.0% | |
| ACAGACTTGTGAAACTATTT+GGG | - | chr4.3:9975382-9975401 | MS.gene030781:intron | 30.0% | |
| AGAATAGTGAACAAATCATC+AGG | - | chr4.3:9977213-9977232 | MS.gene030781:CDS | 30.0% | |
| AGGAATAACTAGTAAAAACC+AGG | - | chr4.3:9978409-9978428 | MS.gene030781:intron | 30.0% | |
| AGTGATTTAGAAATGTGTAC+CGG | + | chr4.3:9976083-9976102 | None:intergenic | 30.0% | |
| ATACATTCTTGGCAATTCTA+AGG | - | chr4.3:9975745-9975764 | MS.gene030781:CDS | 30.0% | |
| ATATGTTAGAGAAAGGAACT+AGG | + | chr4.3:9978051-9978070 | None:intergenic | 30.0% | |
| ATGCTTTCATTGTTCCAATA+AGG | - | chr4.3:9976327-9976346 | MS.gene030781:intron | 30.0% | |
| ATGTTGCAACTAACTCAAAA+TGG | + | chr4.3:9975850-9975869 | None:intergenic | 30.0% | |
| ATTTAACCATGTAGGATCAT+AGG | - | chr4.3:9977443-9977462 | MS.gene030781:CDS | 30.0% | |
| CTGGTATTGTTTCAAAAGAT+CGG | + | chr4.3:9977612-9977631 | None:intergenic | 30.0% | |
| GAAAGCTAATAACTTCTATG+AGG | - | chr4.3:9978370-9978389 | MS.gene030781:intron | 30.0% | |
| GAATAGTGAACAAATCATCA+GGG | - | chr4.3:9977214-9977233 | MS.gene030781:CDS | 30.0% | |
| GGAATAACTAGTAAAAACCA+GGG | - | chr4.3:9978410-9978429 | MS.gene030781:intron | 30.0% | |
| GGAATATATCAAGGTTAGAA+TGG | + | chr4.3:9977305-9977324 | None:intergenic | 30.0% | |
| GTTTATTCTATGCAGTCTTT+GGG | - | chr4.3:9975195-9975214 | MS.gene030781:intron | 30.0% | |
| TACAGACTTGTGAAACTATT+TGG | - | chr4.3:9975381-9975400 | MS.gene030781:intron | 30.0% | |
| TATGAAGTAATCTAGACGTT+CGG | + | chr4.3:9977880-9977899 | None:intergenic | 30.0% | |
| TCAAAATGGGTGTTCAATAT+AGG | - | chr4.3:9975097-9975116 | MS.gene030781:intron | 30.0% | |
| TCATTTGCATTTAACCATGT+AGG | - | chr4.3:9977435-9977454 | MS.gene030781:CDS | 30.0% | |
| TCTACACTCTTAACATCAAT+TGG | + | chr4.3:9975706-9975725 | None:intergenic | 30.0% | |
| TGCTTTCATTGTTCCAATAA+GGG | - | chr4.3:9976328-9976347 | MS.gene030781:intron | 30.0% | |
| TGTAGTTATCTATGATCTGA+TGG | - | chr4.3:9977070-9977089 | MS.gene030781:CDS | 30.0% | |
| TTAGATATTCTGACAGTTTG+TGG | + | chr4.3:9978806-9978825 | None:intergenic | 30.0% | |
| TTATAGGAGCAATACATTCT+TGG | - | chr4.3:9975734-9975753 | MS.gene030781:CDS | 30.0% | |
| TTATAGTGTTAAAGAGAGCA+AGG | + | chr4.3:9978737-9978756 | None:intergenic | 30.0% | |
| TTTATGCTCTTGATCGAATA+TGG | - | chr4.3:9978175-9978194 | MS.gene030781:intron | 30.0% | |
| TTTATTCTATGCAGTCTTTG+GGG | - | chr4.3:9975196-9975215 | MS.gene030781:intron | 30.0% | |
| ! | AAAAATATAAAGGCATGTGG+GGG | - | chr4.3:9975811-9975830 | MS.gene030781:CDS | 30.0% |
| ! | AAAGATTTTCACTAGCCAAA+TGG | + | chr4.3:9978638-9978657 | None:intergenic | 30.0% |
| ! | ACCTATGTTTTCCTTCTTTT+TGG | + | chr4.3:9978540-9978559 | None:intergenic | 30.0% |
| ! | ACTCCTTTTGCATCATAATT+AGG | + | chr4.3:9976290-9976309 | None:intergenic | 30.0% |
| ! | AGCTGCAATTTTACAACTTT+TGG | - | chr4.3:9977493-9977512 | MS.gene030781:CDS | 30.0% |
| ! | ATTGTGTATGAATCAGCTTT+TGG | - | chr4.3:9974966-9974985 | MS.gene030781:intron | 30.0% |
| ! | CAATTTTGTGAAGTGAAAAG+TGG | - | chr4.3:9975777-9975796 | MS.gene030781:CDS | 30.0% |
| ! | CCTATGTTTTCCTTCTTTTT+GGG | + | chr4.3:9978539-9978558 | None:intergenic | 30.0% |
| ! | CTGAGTTGAATTTGAGATTT+AGG | - | chr4.3:9978704-9978723 | MS.gene030781:CDS | 30.0% |
| ! | GCTGCAATTTTACAACTTTT+GGG | - | chr4.3:9977494-9977513 | MS.gene030781:CDS | 30.0% |
| ! | TATTGATTATGAGTGCCATT+TGG | - | chr4.3:9978620-9978639 | MS.gene030781:intron | 30.0% |
| ! | TGATGTTAAGAGTGTAGAAT+GGG | - | chr4.3:9975708-9975727 | MS.gene030781:intron | 30.0% |
| ! | TTGATGTTAAGAGTGTAGAA+TGG | - | chr4.3:9975707-9975726 | MS.gene030781:intron | 30.0% |
| !! | CTATGATGGTATTGATAACT+TGG | - | chr4.3:9975264-9975283 | MS.gene030781:intron | 30.0% |
| !! | GCTAGTGAAAATCTTTGTTT+TGG | - | chr4.3:9978642-9978661 | MS.gene030781:CDS | 30.0% |
| !! | GTTCTTAAAGTGTTGTCATT+AGG | - | chr4.3:9975663-9975682 | MS.gene030781:intron | 30.0% |
| AAATTTCCAACAGAGACACT+AGG | + | chr4.3:9975974-9975993 | None:intergenic | 35.0% | |
| AATGTCATGATCATTCCTCA+AGG | + | chr4.3:9976951-9976970 | None:intergenic | 35.0% | |
| ACGAAGTAGAGAATATCTGA+TGG | + | chr4.3:9976636-9976655 | None:intergenic | 35.0% | |
| ACGGGATCCTAAATTTCAAT+TGG | - | chr4.3:9977748-9977767 | MS.gene030781:intron | 35.0% | |
| AGAATATCTGATGGCAATAG+TGG | + | chr4.3:9976627-9976646 | None:intergenic | 35.0% | |
| AGCTTTCATTATGAGCTATC+AGG | + | chr4.3:9978357-9978376 | None:intergenic | 35.0% | |
| AGTGTCTCTGTTGGAAATTT+AGG | - | chr4.3:9975974-9975993 | MS.gene030781:intron | 35.0% | |
| ATAAACAGGTTCAAATGTGC+AGG | - | chr4.3:9976124-9976143 | MS.gene030781:CDS | 35.0% | |
| ATGATGTTTCTCCATTTCAC+AGG | - | chr4.3:9978776-9978795 | MS.gene030781:CDS | 35.0% | |
| ATGGTTATGCTGCTGTAAAT+CGG | - | chr4.3:9976918-9976937 | MS.gene030781:CDS | 35.0% | |
| ATTTCGAGCACGTAAGTAAT+AGG | - | chr4.3:9977553-9977572 | MS.gene030781:CDS | 35.0% | |
| CAATCATGTATCTCAATTCC+AGG | + | chr4.3:9976377-9976396 | None:intergenic | 35.0% | |
| CAATTCTCGGTGATTATCTT+TGG | + | chr4.3:9974950-9974969 | None:intergenic | 35.0% | |
| CACATAATCAACATTACGGT+AGG | + | chr4.3:9978214-9978233 | None:intergenic | 35.0% | |
| CATAAGGACAAGTACTATGA+TGG | - | chr4.3:9975250-9975269 | MS.gene030781:intron | 35.0% | |
| CATGATTGTGGTCATAAAGT+TGG | - | chr4.3:9976389-9976408 | MS.gene030781:intron | 35.0% | |
| CCCAAAAAGAAGGAAAACAT+AGG | - | chr4.3:9978536-9978555 | MS.gene030781:intron | 35.0% | |
| GAAATAGGCCGTGTTAAAAT+TGG | + | chr4.3:9978100-9978119 | None:intergenic | 35.0% | |
| GAGCCACATAATCAACATTA+CGG | + | chr4.3:9978218-9978237 | None:intergenic | 35.0% | |
| GATCATAGATAACTACAGTC+TGG | + | chr4.3:9977067-9977086 | None:intergenic | 35.0% | |
| GATCGAATATGGAATGACAT+TGG | - | chr4.3:9978186-9978205 | MS.gene030781:intron | 35.0% | |
| GCAAAAGGAGTTTCTGATAT+GGG | - | chr4.3:9976299-9976318 | MS.gene030781:intron | 35.0% | |
| GGAATTGAGATACATGATTG+TGG | - | chr4.3:9976377-9976396 | MS.gene030781:intron | 35.0% | |
| GGTTTATTCTATGCAGTCTT+TGG | - | chr4.3:9975194-9975213 | MS.gene030781:intron | 35.0% | |
| GTGATTTAGAAATGTGTACC+GGG | + | chr4.3:9976082-9976101 | None:intergenic | 35.0% | |
| TAAACAGGTTCAAATGTGCA+GGG | - | chr4.3:9976125-9976144 | MS.gene030781:CDS | 35.0% | |
| TAACTAGTAAAAACCAGGGT+AGG | - | chr4.3:9978414-9978433 | MS.gene030781:intron | 35.0% | |
| TATGTGAGGGACAACTATAA+TGG | - | chr4.3:9978444-9978463 | MS.gene030781:CDS | 35.0% | |
| TCGGTTTAGCAACTTCTATA+GGG | - | chr4.3:9975636-9975655 | MS.gene030781:intron | 35.0% | |
| TCTCAGTACACACAATTTGT+GGG | - | chr4.3:9978924-9978943 | MS.gene030781:CDS | 35.0% | |
| TGCAAAAGGAGTTTCTGATA+TGG | - | chr4.3:9976298-9976317 | MS.gene030781:intron | 35.0% | |
| TGCAACATCATTGTCGAATT+TGG | - | chr4.3:9975862-9975881 | MS.gene030781:CDS | 35.0% | |
| TGCTTTCTTACCCAAAAAGA+AGG | - | chr4.3:9978526-9978545 | MS.gene030781:CDS | 35.0% | |
| TTAGCAACTTCTATAGGGTT+GGG | - | chr4.3:9975641-9975660 | MS.gene030781:intron | 35.0% | |
| TTATTAAGTGCCTACAGCAT+AGG | + | chr4.3:9975557-9975576 | None:intergenic | 35.0% | |
| TTTAGCAACTTCTATAGGGT+TGG | - | chr4.3:9975640-9975659 | MS.gene030781:intron | 35.0% | |
| TTTCATTTGGAGAGTAGCAA+AGG | + | chr4.3:9977363-9977382 | None:intergenic | 35.0% | |
| TTTGGGAACACAGAAACATA+AGG | - | chr4.3:9975234-9975253 | MS.gene030781:intron | 35.0% | |
| ! | AAGTGTTGTCATTAGGTTCA+TGG | - | chr4.3:9975670-9975689 | MS.gene030781:intron | 35.0% |
| ! | AGTGTAGAATGGGTTCTTAT+AGG | - | chr4.3:9975718-9975737 | MS.gene030781:CDS | 35.0% |
| ! | ATGTCGCTTGGAATCAAAAT+GGG | - | chr4.3:9975084-9975103 | MS.gene030781:intron | 35.0% |
| ! | ATTGATAACTTGGATTACCC+AGG | - | chr4.3:9975274-9975293 | MS.gene030781:intron | 35.0% |
| ! | CATTTGATAGCACCATCATT+TGG | + | chr4.3:9976206-9976225 | None:intergenic | 35.0% |
| ! | CTACCGTAATGTTGATTATG+TGG | - | chr4.3:9978212-9978231 | MS.gene030781:intron | 35.0% |
| ! | GACATTTTCCAGACATTTGA+AGG | - | chr4.3:9976965-9976984 | MS.gene030781:CDS | 35.0% |
| ! | GCTGATTCATACACAATTCT+CGG | + | chr4.3:9974963-9974982 | None:intergenic | 35.0% |
| ! | GGTGGTTCTGTAATCAATTT+GGG | - | chr4.3:9975217-9975236 | MS.gene030781:intron | 35.0% |
| ! | GTGTACCTTTCCTTTGTTTA+TGG | - | chr4.3:9977469-9977488 | MS.gene030781:CDS | 35.0% |
| ! | TATGTCGCTTGGAATCAAAA+TGG | - | chr4.3:9975083-9975102 | MS.gene030781:intron | 35.0% |
| ! | TGAGCTTTGTCTTATTCTGT+CGG | - | chr4.3:9975617-9975636 | MS.gene030781:intron | 35.0% |
| ! | TTTTGCCACAACAAACTTAG+TGG | - | chr4.3:9976757-9976776 | MS.gene030781:CDS | 35.0% |
| !! | AATTCCAGGAAGTGTTTGAT+GGG | + | chr4.3:9976363-9976382 | None:intergenic | 35.0% |
| !! | CAAATGATGGTGCTATCAAA+TGG | - | chr4.3:9976204-9976223 | MS.gene030781:intron | 35.0% |
| !! | TTATGTACCTTGGCTTTGTT+GGG | + | chr4.3:9978240-9978259 | None:intergenic | 35.0% |
| !! | TTTATGTACCTTGGCTTTGT+TGG | + | chr4.3:9978241-9978260 | None:intergenic | 35.0% |
| !! | TTTCTCCACTAAGTTTGTTG+TGG | + | chr4.3:9976765-9976784 | None:intergenic | 35.0% |
| !! | TTTTACAACTTTTGGGTGTG+CGG | - | chr4.3:9977501-9977520 | MS.gene030781:CDS | 35.0% |
| !!! | GTTATTCCTGCTTTTTAGAG+TGG | + | chr4.3:9978398-9978417 | None:intergenic | 35.0% |
| !!! | TTTGCTATTTTGGAAGCTGT+TGG | - | chr4.3:9975051-9975070 | MS.gene030781:intron | 35.0% |
| AAAGTCACTCAGCATCTGTA+GGG | - | chr4.3:9976880-9976899 | MS.gene030781:CDS | 40.0% | |
| AAATCCAGTTACTGCTAGGT+GGG | - | chr4.3:9977709-9977728 | MS.gene030781:intron | 40.0% | |
| AATTCATTGAAGCTGTGCAG+AGG | - | chr4.3:9978020-9978039 | MS.gene030781:intron | 40.0% | |
| AGCTGCCATAAACAAAGGAA+AGG | + | chr4.3:9977477-9977496 | None:intergenic | 40.0% | |
| ATCTTCCCGATCATGTAACA+AGG | - | chr4.3:9978871-9978890 | MS.gene030781:CDS | 40.0% | |
| ATTCTCCACAGTCTACACTA+AGG | + | chr4.3:9977198-9977217 | None:intergenic | 40.0% | |
| ATTGCAGCTGCCATAAACAA+AGG | + | chr4.3:9977482-9977501 | None:intergenic | 40.0% | |
| CAAATTCAACTCAGTGCTTC+TGG | + | chr4.3:9978698-9978717 | None:intergenic | 40.0% | |
| CAACACAGTTCTTCTTCAAC+AGG | - | chr4.3:9976991-9977010 | MS.gene030781:CDS | 40.0% | |
| CAATACCAGAGAAAGTTCCA+AGG | - | chr4.3:9977623-9977642 | MS.gene030781:intron | 40.0% | |
| CAATTCAAACAAGCTCAGAG+AGG | + | chr4.3:9975336-9975355 | None:intergenic | 40.0% | |
| CACGAGAAACATCTCCAAAA+CGG | + | chr4.3:9976484-9976503 | None:intergenic | 40.0% | |
| CACTTTCCTATGATCCTACA+TGG | + | chr4.3:9977452-9977471 | None:intergenic | 40.0% | |
| CATCTCCAAAACGGTTTAGA+AGG | + | chr4.3:9976475-9976494 | None:intergenic | 40.0% | |
| CCAAGTGAGGAATATTGCAA+AGG | - | chr4.3:9978830-9978849 | MS.gene030781:CDS | 40.0% | |
| CCTTTGCAATATTCCTCACT+TGG | + | chr4.3:9978833-9978852 | None:intergenic | 40.0% | |
| CGCTTACAGAAGAATATGCA+AGG | + | chr4.3:9976589-9976608 | None:intergenic | 40.0% | |
| CTCCATTATCAACACCATTG+AGG | + | chr4.3:9976415-9976434 | None:intergenic | 40.0% | |
| CTCTCAGTACACACAATTTG+TGG | - | chr4.3:9978923-9978942 | MS.gene030781:CDS | 40.0% | |
| CTGTGACAGATAAGTACTCA+TGG | + | chr4.3:9977687-9977706 | None:intergenic | 40.0% | |
| CTTCAACCTAGCAAAAACTG+TGG | + | chr4.3:9976264-9976283 | None:intergenic | 40.0% | |
| GAAATTACCATGGTGAAGCT+CGG | + | chr4.3:9975314-9975333 | None:intergenic | 40.0% | |
| GATTTACAGCAGCATAACCA+TGG | + | chr4.3:9976919-9976938 | None:intergenic | 40.0% | |
| GCTGCAACCTTCATTTGTAA+AGG | + | chr4.3:9977590-9977609 | None:intergenic | 40.0% | |
| GTAGTCGAGAATCGTTACTT+CGG | + | chr4.3:9976684-9976703 | None:intergenic | 40.0% | |
| GTTGGAAATTTAGGTGCACT+GGG | - | chr4.3:9975983-9976002 | MS.gene030781:CDS | 40.0% | |
| TAAAAACCAGGGTAGGTAGT+GGG | - | chr4.3:9978421-9978440 | MS.gene030781:intron | 40.0% | |
| TAAGCTTATGCTGATGAGAC+TGG | + | chr4.3:9976706-9976725 | None:intergenic | 40.0% | |
| TAGTCGAGAATCGTTACTTC+GGG | + | chr4.3:9976683-9976702 | None:intergenic | 40.0% | |
| TATGCTGCTGTAAATCGGTT+TGG | - | chr4.3:9976923-9976942 | MS.gene030781:CDS | 40.0% | |
| TCAATAGGGGTTAGAAGATG+TGG | + | chr4.3:9974922-9974941 | None:intergenic | 40.0% | |
| TCTCTACTTCGTCAGCAATT+TGG | - | chr4.3:9976644-9976663 | MS.gene030781:intron | 40.0% | |
| TCTTCCCGATCATGTAACAA+GGG | - | chr4.3:9978872-9978891 | MS.gene030781:CDS | 40.0% | |
| TGGGTCTTCATATCCCTTAT+TGG | + | chr4.3:9976344-9976363 | None:intergenic | 40.0% | |
| TGTTGGAAATTTAGGTGCAC+TGG | - | chr4.3:9975982-9976001 | MS.gene030781:CDS | 40.0% | |
| TGTTGTCTCCTTCAAATGTC+TGG | + | chr4.3:9976976-9976995 | None:intergenic | 40.0% | |
| TTCATAAGCACCTATGCTGT+AGG | - | chr4.3:9975544-9975563 | MS.gene030781:CDS | 40.0% | |
| TTGGAGATGTTTCTCGTGAT+GGG | - | chr4.3:9976486-9976505 | MS.gene030781:intron | 40.0% | |
| TTTGGAGATGTTTCTCGTGA+TGG | - | chr4.3:9976485-9976504 | MS.gene030781:intron | 40.0% | |
| ! | AGTTTGCCACAGTTTTTGCT+AGG | - | chr4.3:9976255-9976274 | MS.gene030781:intron | 40.0% |
| ! | ATCAAGAGCATAAAGATCGC+AGG | + | chr4.3:9978169-9978188 | None:intergenic | 40.0% |
| ! | CTCTCTGAGCTTGTTTGAAT+TGG | - | chr4.3:9975334-9975353 | MS.gene030781:intron | 40.0% |
| ! | GAAATTTAGGATCCCGTAGA+TGG | + | chr4.3:9977745-9977764 | None:intergenic | 40.0% |
| ! | GACAACCTTCTAAACCGTTT+TGG | - | chr4.3:9976467-9976486 | MS.gene030781:intron | 40.0% |
| ! | GGGTGGTTCTGTAATCAATT+TGG | - | chr4.3:9975216-9975235 | MS.gene030781:intron | 40.0% |
| ! | GTCGGTTTAGCAACTTCTAT+AGG | - | chr4.3:9975635-9975654 | MS.gene030781:intron | 40.0% |
| ! | GTGTTTTCCTCTCATGTAAC+CGG | + | chr4.3:9974857-9974876 | None:intergenic | 40.0% |
| !! | ATGATGGTGCTATCAAATGG+TGG | - | chr4.3:9976207-9976226 | MS.gene030781:intron | 40.0% |
| !! | CAATTCCAGGAAGTGTTTGA+TGG | + | chr4.3:9976364-9976383 | None:intergenic | 40.0% |
| !! | CTTCTGGCGTTGTTTTCAAA+AGG | + | chr4.3:9978682-9978701 | None:intergenic | 40.0% |
| !! | TAAATCGGTTTGGTTCCTTG+AGG | - | chr4.3:9976933-9976952 | MS.gene030781:CDS | 40.0% |
| AAGACCCATCAAACACTTCC+TGG | - | chr4.3:9976356-9976375 | MS.gene030781:intron | 45.0% | |
| ACAGATGCTGAGTGACTTTG+CGG | + | chr4.3:9976879-9976898 | None:intergenic | 45.0% | |
| ACCAGAGAAAGTTCCAAGGA+GGG | - | chr4.3:9977627-9977646 | MS.gene030781:intron | 45.0% | |
| AGAGTAAGCTCCTGATTGCT+TGG | + | chr4.3:9978907-9978926 | None:intergenic | 45.0% | |
| AGCCAAATCCAGTTACTGCT+AGG | - | chr4.3:9977705-9977724 | MS.gene030781:intron | 45.0% | |
| AGGTGCCCTTGTTACATGAT+CGG | + | chr4.3:9978880-9978899 | None:intergenic | 45.0% | |
| CAAAGTCACTCAGCATCTGT+AGG | - | chr4.3:9976879-9976898 | MS.gene030781:CDS | 45.0% | |
| CAAATCCAGTTACTGCTAGG+TGG | - | chr4.3:9977708-9977727 | MS.gene030781:intron | 45.0% | |
| CACCTAGCAGTAACTGGATT+TGG | + | chr4.3:9977710-9977729 | None:intergenic | 45.0% | |
| CCTTCGGTTAATAAGCGGTT+CGG | - | chr4.3:9976527-9976546 | MS.gene030781:intron | 45.0% | |
| CGCTTCCTTCGGTTAATAAG+CGG | - | chr4.3:9976522-9976541 | MS.gene030781:intron | 45.0% | |
| CGGTCATAGCAAAACAACCT+GGG | + | chr4.3:9975294-9975313 | None:intergenic | 45.0% | |
| CTACACCTTAGTGTAGACTG+TGG | - | chr4.3:9977190-9977209 | MS.gene030781:CDS | 45.0% | |
| GCTCAGAGAGGAAATTACCA+TGG | + | chr4.3:9975324-9975343 | None:intergenic | 45.0% | |
| GTAAAAACCAGGGTAGGTAG+TGG | - | chr4.3:9978420-9978439 | MS.gene030781:intron | 45.0% | |
| GTACACAAGTACGCTTCCTT+CGG | - | chr4.3:9976511-9976530 | MS.gene030781:intron | 45.0% | |
| TACCAGAGAAAGTTCCAAGG+AGG | - | chr4.3:9977626-9977645 | MS.gene030781:intron | 45.0% | |
| TCGCGGGAAGAAATTAATCG+TGG | - | chr4.3:9974816-9974835 | MS.gene030781:CDS | 45.0% | |
| TCGGTCATAGCAAAACAACC+TGG | + | chr4.3:9975295-9975314 | None:intergenic | 45.0% | |
| TGTAAGCGTCCTCAAGGTTT+CGG | - | chr4.3:9976601-9976620 | MS.gene030781:intron | 45.0% | |
| TTCATCGGTGATCGGATCAA+AGG | + | chr4.3:9976168-9976187 | None:intergenic | 45.0% | |
| TTCTTCTGTAAGCGTCCTCA+AGG | - | chr4.3:9976595-9976614 | MS.gene030781:intron | 45.0% | |
| TTTCCAACAGAGACACTAGG+AGG | + | chr4.3:9975971-9975990 | None:intergenic | 45.0% | |
| ! | AAAGCACTCAAAACCACTCG+GGG | - | chr4.3:9977919-9977938 | MS.gene030781:intron | 45.0% |
| ! | ATTCTATGCAGTCTTTGGGG+TGG | - | chr4.3:9975199-9975218 | MS.gene030781:intron | 45.0% |
| ! | GCATAAGTTGAAGCCAGCAT+GGG | + | chr4.3:9976731-9976750 | None:intergenic | 45.0% |
| ! | GGTCATAAAGTTGGCCTCAA+TGG | - | chr4.3:9976398-9976417 | MS.gene030781:intron | 45.0% |
| ! | TGCATAAGTTGAAGCCAGCA+TGG | + | chr4.3:9976732-9976751 | None:intergenic | 45.0% |
| ! | TTGGCTCTTGTTAGAGAAGC+TGG | - | chr4.3:9974985-9975004 | MS.gene030781:intron | 45.0% |
| !! | CGAAAGCACTCAAAACCACT+CGG | - | chr4.3:9977917-9977936 | MS.gene030781:intron | 45.0% |
| !! | GAAAGCACTCAAAACCACTC+GGG | - | chr4.3:9977918-9977937 | MS.gene030781:intron | 45.0% |
| !! | GGCCTCAATGGTGTTGATAA+TGG | - | chr4.3:9976410-9976429 | MS.gene030781:intron | 45.0% |
| !! | GGTAGTGTTGATATGTCGCT+TGG | - | chr4.3:9975072-9975091 | MS.gene030781:intron | 45.0% |
| !! | GGTGCTATCAAATGGTGGAT+TGG | - | chr4.3:9976212-9976231 | MS.gene030781:intron | 45.0% |
| !! | TAAAGCGGTGTCGCATAGTA+TGG | - | chr4.3:9975895-9975914 | MS.gene030781:intron | 45.0% |
| !!! | TAAAATTATTATAATCTTTT+CGG | - | chr4.3:9978275-9978294 | MS.gene030781:intron | 5.0% |
| AACAGAGACACTAGGAGGCT+AGG | + | chr4.3:9975966-9975985 | None:intergenic | 50.0% | |
| AGGACAGCTGGTGCAGAAAT+AGG | + | chr4.3:9978115-9978134 | None:intergenic | 50.0% | |
| ATCGGTGATCGGATCAAAGG+TGG | + | chr4.3:9976165-9976184 | None:intergenic | 50.0% | |
| CAAAGGTGGCGAGAGTTTGA+AGG | + | chr4.3:9976151-9976170 | None:intergenic | 50.0% | |
| CAATAGTGGCCGAAACCTTG+AGG | + | chr4.3:9976613-9976632 | None:intergenic | 50.0% | |
| CCGAACCGCTTATTAACCGA+AGG | + | chr4.3:9976530-9976549 | None:intergenic | 50.0% | |
| CGAGAATCGTTACTTCGGGT+TGG | + | chr4.3:9976679-9976698 | None:intergenic | 50.0% | |
| CGGTTTAGAAGGTTGTCTCG+AGG | + | chr4.3:9976464-9976483 | None:intergenic | 50.0% | |
| GAGGGACTTTAGCAGTGACA+TGG | - | chr4.3:9977645-9977664 | MS.gene030781:intron | 50.0% | |
| GCACCTATTGCCAAGCAATC+AGG | - | chr4.3:9978894-9978913 | MS.gene030781:CDS | 50.0% | |
| GCATAAGCTTATGCCCATGC+TGG | - | chr4.3:9976715-9976734 | MS.gene030781:intron | 50.0% | |
| GCTACTGCATAGCACTTACC+CGG | - | chr4.3:9976061-9976080 | MS.gene030781:CDS | 50.0% | |
| GCTCCTGATTGCTTGGCAAT+AGG | + | chr4.3:9978900-9978919 | None:intergenic | 50.0% | |
| GGAAGGTGAAGACCATCTAC+GGG | - | chr4.3:9977730-9977749 | MS.gene030781:intron | 50.0% | |
| GGGAAGGTGAAGACCATCTA+CGG | - | chr4.3:9977729-9977748 | MS.gene030781:intron | 50.0% | |
| GGGTGTGCGGTGTGTTTATT+TGG | - | chr4.3:9977514-9977533 | MS.gene030781:CDS | 50.0% | |
| GGTGCCCTTGTTACATGATC+GGG | + | chr4.3:9978879-9978898 | None:intergenic | 50.0% | |
| GTGGACACAAATTCCCTCTC+CGG | - | chr4.3:9974835-9974854 | MS.gene030781:CDS | 50.0% | |
| TAGCCTCCTAGTGTCTCTGT+TGG | - | chr4.3:9975965-9975984 | MS.gene030781:intron | 50.0% | |
| TCAAAACCACTCGGGGACTT+TGG | - | chr4.3:9977926-9977945 | MS.gene030781:intron | 50.0% | |
| TCACTGCTAAAGTCCCTCCT+TGG | + | chr4.3:9977643-9977662 | None:intergenic | 50.0% | |
| TCCCTCCTTGGAACTTTCTC+TGG | + | chr4.3:9977631-9977650 | None:intergenic | 50.0% | |
| TCCTCTCATGTAACCGGAGA+GGG | + | chr4.3:9974851-9974870 | None:intergenic | 50.0% | |
| TGCAGATGTCCATGCTCTCT+CGG | - | chr4.3:9976823-9976842 | MS.gene030781:CDS | 50.0% | |
| TGGAGCTCTTAGATTCCGCT+CGG | - | chr4.3:9976430-9976449 | MS.gene030781:intron | 50.0% | |
| TGTGGCAAACTTGCCATGCA+TGG | + | chr4.3:9976246-9976265 | None:intergenic | 50.0% | |
| TTCCTCTCATGTAACCGGAG+AGG | + | chr4.3:9974852-9974871 | None:intergenic | 50.0% | |
| ! | GAGGGACCACTCTAAAAAGC+AGG | - | chr4.3:9978389-9978408 | MS.gene030781:intron | 50.0% |
| !! | GAACTTGTTGGTGGTAGGGT+AGG | - | chr4.3:9976563-9976582 | MS.gene030781:intron | 50.0% |
| !! | GGTAGGTAGTGGGTATGTGA+GGG | - | chr4.3:9978431-9978450 | MS.gene030781:intron | 50.0% |
| AGCATAACCATGGCCTCCAC+AGG | + | chr4.3:9976909-9976928 | None:intergenic | 55.0% | |
| AGCATCTGTAGGGAAGCCTG+TGG | - | chr4.3:9976890-9976909 | MS.gene030781:CDS | 55.0% | |
| ATCTGTAGGGAAGCCTGTGG+AGG | - | chr4.3:9976893-9976912 | MS.gene030781:CDS | 55.0% | |
| ATTGGCAATGCCGCCATGCA+TGG | - | chr4.3:9976230-9976249 | MS.gene030781:intron | 55.0% | |
| CACATACCCACTACCTACCC+TGG | + | chr4.3:9978430-9978449 | None:intergenic | 55.0% | |
| CCAGTTACTGCTAGGTGGGA+AGG | - | chr4.3:9977713-9977732 | MS.gene030781:intron | 55.0% | |
| CCTTCCCACCTAGCAGTAAC+TGG | + | chr4.3:9977716-9977735 | None:intergenic | 55.0% | |
| CTCGAGGAATTCTCACCGAG+CGG | + | chr4.3:9976448-9976467 | None:intergenic | 55.0% | |
| GCAACTCTCGGGGAACTTGT+TGG | - | chr4.3:9976551-9976570 | MS.gene030781:intron | 55.0% | |
| GCTATGACCGAGCTTCACCA+TGG | - | chr4.3:9975304-9975323 | MS.gene030781:intron | 55.0% | |
| GGCAAACTTGCCATGCATGG+CGG | + | chr4.3:9976243-9976262 | None:intergenic | 55.0% | |
| TCCCTCTCCGGTTACATGAG+AGG | - | chr4.3:9974847-9974866 | MS.gene030781:CDS | 55.0% | |
| TGTGGCTCCCAACAAAGCCA+AGG | - | chr4.3:9978230-9978249 | MS.gene030781:intron | 55.0% | |
| TTCAGAGCAGCTTGAGCGCT+TGG | + | chr4.3:9978141-9978160 | None:intergenic | 55.0% | |
| !! | AAGCGGTTCGGTGCAACTCT+CGG | - | chr4.3:9976539-9976558 | MS.gene030781:intron | 55.0% |
| !! | ACTCTCGGGGAACTTGTTGG+TGG | - | chr4.3:9976554-9976573 | MS.gene030781:intron | 55.0% |
| !! | CGGGGAACTTGTTGGTGGTA+GGG | - | chr4.3:9976559-9976578 | MS.gene030781:intron | 55.0% |
| !! | GGGTAGGTAGTGGGTATGTG+AGG | - | chr4.3:9978430-9978449 | MS.gene030781:intron | 55.0% |
| !! | GTTACTTCGGGTTGGTCTCG+AGG | + | chr4.3:9976671-9976690 | None:intergenic | 55.0% |
| !! | TCGGGGAACTTGTTGGTGGT+AGG | - | chr4.3:9976558-9976577 | MS.gene030781:intron | 55.0% |
| AGCGCTTGGATCAGGACAGC+TGG | + | chr4.3:9978127-9978146 | None:intergenic | 60.0% | |
| AGGCATGTGGGGGTAACGTG+TGG | - | chr4.3:9975821-9975840 | MS.gene030781:CDS | 60.0% | |
| CATGCACCAAAGTCCCCGAG+TGG | + | chr4.3:9977935-9977954 | None:intergenic | 60.0% | |
| GATGTCCATGCTCTCTCGGC+AGG | - | chr4.3:9976827-9976846 | MS.gene030781:CDS | 60.0% | |
| GCAGCTTGAGCGCTTGGATC+AGG | + | chr4.3:9978135-9978154 | None:intergenic | 60.0% | |
| GGCATGTGGGGGTAACGTGT+GGG | - | chr4.3:9975822-9975841 | MS.gene030781:CDS | 60.0% | |
| TCAGACCTGCCGAGAGAGCA+TGG | + | chr4.3:9976835-9976854 | None:intergenic | 60.0% | |
| TGCTCTCTCGGCAGGTCTGA+AGG | - | chr4.3:9976835-9976854 | MS.gene030781:CDS | 60.0% | |
| ! | CACTCGGGGACTTTGGTGCA+TGG | - | chr4.3:9977933-9977952 | MS.gene030781:intron | 60.0% |
| !! | AGCGGTTCGGTGCAACTCTC+GGG | - | chr4.3:9976540-9976559 | MS.gene030781:intron | 60.0% |
| AGGGAAGCCTGTGGAGGCCA+TGG | - | chr4.3:9976899-9976918 | MS.gene030781:CDS | 65.0% | |
| !! | GCGGTTCGGTGCAACTCTCG+GGG | - | chr4.3:9976541-9976560 | MS.gene030781:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 9974802 | 9978956 | 9974802 | ID=MS.gene030781 |
| chr4.3 | mRNA | 9974802 | 9978956 | 9974802 | ID=MS.gene030781.t1;Parent=MS.gene030781 |
| chr4.3 | exon | 9978640 | 9978956 | 9978640 | ID=MS.gene030781.t1.exon1;Parent=MS.gene030781.t1 |
| chr4.3 | CDS | 9978640 | 9978956 | 9978640 | ID=cds.MS.gene030781.t1;Parent=MS.gene030781.t1 |
| chr4.3 | exon | 9978433 | 9978548 | 9978433 | ID=MS.gene030781.t1.exon2;Parent=MS.gene030781.t1 |
| chr4.3 | CDS | 9978433 | 9978548 | 9978433 | ID=cds.MS.gene030781.t1;Parent=MS.gene030781.t1 |
| chr4.3 | exon | 9976746 | 9977626 | 9976746 | ID=MS.gene030781.t1.exon3;Parent=MS.gene030781.t1 |
| chr4.3 | CDS | 9976746 | 9977626 | 9976746 | ID=cds.MS.gene030781.t1;Parent=MS.gene030781.t1 |
| chr4.3 | exon | 9975977 | 9976156 | 9975977 | ID=MS.gene030781.t1.exon4;Parent=MS.gene030781.t1 |
| chr4.3 | CDS | 9975977 | 9976156 | 9975977 | ID=cds.MS.gene030781.t1;Parent=MS.gene030781.t1 |
| chr4.3 | exon | 9975717 | 9975883 | 9975717 | ID=MS.gene030781.t1.exon5;Parent=MS.gene030781.t1 |
| chr4.3 | CDS | 9975717 | 9975883 | 9975717 | ID=cds.MS.gene030781.t1;Parent=MS.gene030781.t1 |
| chr4.3 | exon | 9975507 | 9975630 | 9975507 | ID=MS.gene030781.t1.exon6;Parent=MS.gene030781.t1 |
| chr4.3 | CDS | 9975507 | 9975630 | 9975507 | ID=cds.MS.gene030781.t1;Parent=MS.gene030781.t1 |
| chr4.3 | exon | 9974802 | 9974960 | 9974802 | ID=MS.gene030781.t1.exon7;Parent=MS.gene030781.t1 |
| chr4.3 | CDS | 9974802 | 9974960 | 9974802 | ID=cds.MS.gene030781.t1;Parent=MS.gene030781.t1 |
| Gene Sequence |
| Protein sequence |
