AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene028274

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene028274.t1 MTR_4g094695 99.194 992 8 0 1 992 1 992 0.0 1998
MS.gene028274.t1 MTR_2g035840 81.300 1000 164 6 5 991 8 997 0.0 1613
MS.gene028274.t1 MTR_5g010420 48.686 951 459 9 45 989 52 979 0.0 878
MS.gene028274.t1 MTR_5g010420 37.500 96 50 1 12 107 107 192 4.67e-11 67.4
MS.gene028274.t1 MTR_5g010420 27.632 152 102 3 109 255 34 182 4.79e-11 67.4
MS.gene028274.t1 MTR_8g079250 47.208 949 478 8 45 989 59 988 0.0 851
MS.gene028274.t1 MTR_8g079250 30.675 163 96 4 108 255 30 190 1.03e-13 76.3
MS.gene028274.t1 MTR_8g012390 46.968 973 479 13 19 981 6 951 0.0 795
MS.gene028274.t1 MTR_8g079250 43.329 817 440 8 45 857 59 856 0.0 654
MS.gene028274.t1 MTR_8g079250 30.675 163 96 4 108 255 30 190 9.73e-14 76.3
MS.gene028274.t1 MTR_8g012390 42.925 848 449 12 19 857 6 827 0.0 627
MS.gene028274.t1 MTR_8g079250 43.711 636 349 5 45 676 59 689 8.50e-175 526
MS.gene028274.t1 MTR_8g079250 30.675 163 96 4 108 255 30 190 8.75e-14 76.3
MS.gene028274.t1 MTR_3g105190 35.634 710 393 14 302 981 210 885 4.22e-121 392
MS.gene028274.t1 MTR_4g094232 37.926 675 360 13 340 990 285 924 8.02e-121 392
MS.gene028274.t1 MTR_3g105190 33.727 593 331 13 302 866 210 768 1.03e-84 290
MS.gene028274.t1 MTR_2g036380 28.418 746 433 19 203 940 12 664 7.83e-76 266
MS.gene028274.t1 MTR_2g036380 30.660 636 362 17 320 940 3 574 1.58e-75 264
MS.gene028274.t1 MTR_2g036380 33.811 488 278 13 460 940 32 481 3.41e-72 252
MS.gene028274.t1 MTR_2g036380 33.811 488 278 13 460 940 63 512 7.30e-72 252
MS.gene028274.t1 MTR_4g127580 27.577 747 418 23 203 930 17 659 1.49e-68 249
MS.gene028274.t1 MTR_4g094985 25.743 707 406 21 296 956 125 758 7.89e-39 156
MS.gene028274.t1 MTR_8g045070 25.865 549 338 15 458 939 211 757 1.56e-26 117
MS.gene028274.t1 MTR_4g127710 22.801 614 362 20 429 973 135 705 6.71e-23 105
MS.gene028274.t1 MTR_7g117500 23.007 552 342 15 437 934 140 662 7.58e-23 105
MS.gene028274.t1 MTR_4g127710 22.801 614 362 20 429 973 135 705 1.10e-22 105
MS.gene028274.t1 MTR_3g108800 21.793 569 363 12 429 948 131 666 4.49e-22 103
MS.gene028274.t1 MTR_3g108800 21.793 569 363 12 429 948 132 667 4.85e-22 103
MS.gene028274.t1 MTR_2g036650 22.680 582 343 19 429 948 137 673 5.05e-22 103
MS.gene028274.t1 MTR_4g008650 24.343 571 338 18 458 937 255 822 5.79e-22 103
MS.gene028274.t1 MTR_1g009760 21.934 579 350 15 429 948 135 670 2.54e-21 100
MS.gene028274.t1 MTR_8g063880 22.262 557 334 16 439 934 138 656 3.98e-21 100
MS.gene028274.t1 MTR_6g016470 22.813 583 334 19 465 937 245 821 5.43e-21 99.8
MS.gene028274.t1 MTR_1g009760 21.762 579 351 15 429 948 132 667 6.71e-21 99.4
MS.gene028274.t1 MTR_7g117500 23.290 541 343 17 437 934 140 651 7.77e-21 99.4
MS.gene028274.t1 MTR_7g100110 31.282 195 100 4 788 950 636 828 1.79e-20 98.2
MS.gene028274.t1 MTR_6g011310 22.442 557 333 15 439 934 140 658 7.52e-20 96.3
MS.gene028274.t1 MTR_4g107500 22.442 606 358 18 439 973 142 706 7.73e-20 95.9
MS.gene028274.t1 MTR_7g095710 23.191 608 355 17 439 937 250 854 2.47e-19 94.4
MS.gene028274.t1 MTR_6g011310 22.383 554 332 14 439 934 140 653 3.90e-19 94.0
MS.gene028274.t1 MTR_8g006790 22.302 556 334 16 439 934 146 663 6.58e-19 93.2
MS.gene028274.t1 MTR_8g013780 30.198 202 107 5 772 939 174 375 1.68e-18 90.9
MS.gene028274.t1 MTR_8g027160 29.282 181 94 3 788 934 618 798 2.37e-18 91.3
MS.gene028274.t1 MTR_2g449840 21.731 566 342 17 429 934 133 657 3.44e-18 90.5
MS.gene028274.t1 MTR_8g027160 29.282 181 94 3 788 934 618 798 3.46e-18 90.9
MS.gene028274.t1 MTR_4g116950 21.326 558 354 19 429 934 133 657 8.21e-18 89.4
MS.gene028274.t1 MTR_2g104860 20.885 565 348 13 429 934 130 654 8.51e-18 89.4
MS.gene028274.t1 MTR_5g015590 32.402 179 92 3 790 939 649 827 1.32e-17 88.6
MS.gene028274.t1 MTR_5g015590 32.402 179 92 3 790 939 649 827 1.36e-17 89.0
MS.gene028274.t1 MTR_5g015590 32.402 179 92 3 790 939 649 827 1.48e-17 88.6
MS.gene028274.t1 MTR_2g038310 28.962 183 97 2 788 937 695 877 6.67e-17 86.7
MS.gene028274.t1 MTR_2g038310 28.962 183 97 2 788 937 695 877 6.79e-17 86.7
MS.gene028274.t1 MTR_0005s0140 30.508 177 95 3 789 937 568 744 7.41e-17 86.3
MS.gene028274.t1 MTR_8g090125 32.022 178 92 5 789 937 603 780 8.68e-17 86.3
MS.gene028274.t1 MTR_4g043690 31.073 177 94 4 789 937 653 829 9.55e-17 86.3
MS.gene028274.t1 MTR_4g096990 30.168 179 96 3 790 939 647 825 3.46e-16 84.3
MS.gene028274.t1 MTR_3g103070 28.283 198 113 4 771 939 456 653 7.03e-16 83.2
MS.gene028274.t1 MTR_3g103070 28.283 198 113 4 771 939 632 829 7.36e-16 83.2
MS.gene028274.t1 MTR_8g446010 32.044 181 92 5 789 939 601 780 1.68e-15 82.0
MS.gene028274.t1 MTR_4g008650 31.319 182 95 6 786 937 641 822 3.69e-15 80.9
MS.gene028274.t1 MTR_3g103270 27.119 177 98 1 789 934 614 790 1.39e-14 79.0
MS.gene028274.t1 MTR_4g008170 27.322 183 100 3 788 937 715 897 1.80e-14 78.6
MS.gene028274.t1 MTR_4g008170 27.322 183 100 3 788 937 708 890 2.62e-14 78.2
MS.gene028274.t1 MTR_1g009720 26.136 176 100 2 789 934 481 656 9.20e-13 73.2
MS.gene028274.t1 MTR_5g015590 34.328 134 59 3 790 894 649 782 2.76e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene028274.t1 AT5G44790 72.989 1007 245 6 1 989 1 998 0.0 1467
MS.gene028274.t1 AT1G63440 47.614 964 473 9 35 989 47 987 0.0 870
MS.gene028274.t1 AT1G63440 29.825 171 111 3 19 189 109 270 5.87e-12 70.5
MS.gene028274.t1 AT5G21930 36.919 688 378 15 323 979 213 875 3.39e-121 392
MS.gene028274.t1 AT5G21930 36.919 688 378 15 323 979 213 875 3.39e-121 392
MS.gene028274.t1 AT4G33520 36.351 696 380 13 300 979 270 918 1.33e-113 373
MS.gene028274.t1 AT4G33520 36.351 696 380 13 300 979 270 918 1.91e-113 372
MS.gene028274.t1 AT5G21930 35.610 688 364 16 323 979 213 852 4.65e-109 358
MS.gene028274.t1 AT5G21930 36.076 632 344 16 323 923 213 815 1.08e-98 329
MS.gene028274.t1 AT4G30110 28.070 741 422 20 203 930 13 655 3.55e-72 258
MS.gene028274.t1 AT4G30110 28.070 741 422 20 203 930 13 655 3.55e-72 258
MS.gene028274.t1 AT2G19110 26.382 796 457 24 203 980 23 707 5.54e-62 230
MS.gene028274.t1 AT2G19110 26.382 796 457 24 203 980 23 707 5.54e-62 230
MS.gene028274.t1 AT2G19110 26.382 796 457 24 203 980 23 707 5.54e-62 230
MS.gene028274.t1 AT4G30120 30.707 368 215 6 393 759 4 332 5.75e-44 164
MS.gene028274.t1 AT4G30120 27.240 558 320 15 203 759 19 491 4.22e-43 166
MS.gene028274.t1 AT4G37270 26.418 617 360 15 356 930 181 745 2.27e-34 142
MS.gene028274.t1 AT3G57330 25.214 583 347 17 439 937 184 761 3.13e-27 120
MS.gene028274.t1 AT2G41560 25.293 597 344 17 433 937 131 717 3.78e-27 119
MS.gene028274.t1 AT2G41560 25.293 597 344 17 433 937 131 717 3.78e-27 119
MS.gene028274.t1 AT2G41560 25.293 597 344 17 433 937 131 717 3.78e-27 119
MS.gene028274.t1 AT3G57330 25.214 583 347 17 439 937 239 816 4.30e-27 119
MS.gene028274.t1 AT2G41560 25.293 597 344 17 433 937 233 819 6.09e-27 119
MS.gene028274.t1 AT2G24520 24.691 567 340 15 437 948 113 647 4.72e-23 106
MS.gene028274.t1 AT2G24520 24.691 567 340 15 437 948 113 647 4.72e-23 106
MS.gene028274.t1 AT2G24520 24.691 567 340 15 437 948 176 710 5.65e-23 106
MS.gene028274.t1 AT1G80660 22.378 572 335 16 427 934 4 530 1.30e-21 101
MS.gene028274.t1 AT1G80660 22.281 570 334 16 429 934 135 659 4.29e-21 100
MS.gene028274.t1 AT1G80660 22.281 570 334 16 429 934 135 659 4.53e-21 100
MS.gene028274.t1 AT1G80660 22.281 570 334 16 429 934 135 659 4.81e-21 100
MS.gene028274.t1 AT3G60330 23.285 554 336 14 437 934 134 654 5.92e-21 99.8
MS.gene028274.t1 AT3G60330 23.285 554 336 14 437 934 134 654 5.92e-21 99.8
MS.gene028274.t1 AT3G60330 23.105 554 337 14 437 934 134 654 1.15e-20 99.0
MS.gene028274.t1 AT3G60330 23.105 554 337 14 437 934 134 654 1.15e-20 99.0
MS.gene028274.t1 AT1G17260 22.000 550 343 15 439 934 144 661 2.92e-20 97.4
MS.gene028274.t1 AT4G30190 22.261 566 339 16 429 934 130 654 2.93e-20 97.4
MS.gene028274.t1 AT5G57350 22.632 570 332 16 429 934 131 655 3.14e-20 97.4
MS.gene028274.t1 AT5G57350 22.632 570 332 16 429 934 131 655 3.14e-20 97.4
MS.gene028274.t1 AT5G57350 22.632 570 332 16 429 934 131 655 3.14e-20 97.4
MS.gene028274.t1 AT2G07560 22.301 565 339 17 429 934 133 656 6.22e-20 96.3
MS.gene028274.t1 AT1G07670 30.693 202 102 5 783 950 615 812 1.21e-19 95.5
MS.gene028274.t1 AT1G07670 30.693 202 102 5 783 950 615 812 1.21e-19 95.5
MS.gene028274.t1 AT1G07810 30.198 202 103 5 783 950 615 812 1.75e-19 95.1
MS.gene028274.t1 AT5G62670 21.818 605 363 18 439 973 140 704 4.31e-19 93.6
MS.gene028274.t1 AT3G47950 21.951 615 350 17 439 973 144 708 4.79e-19 93.6
MS.gene028274.t1 AT3G47950 21.951 615 350 17 439 973 144 708 4.79e-19 93.6
MS.gene028274.t1 AT2G18960 21.770 565 343 16 429 934 130 654 4.24e-18 90.5
MS.gene028274.t1 AT2G18960 21.770 565 343 16 429 934 66 590 4.32e-18 90.5
MS.gene028274.t1 AT2G18960 21.770 565 343 16 429 934 66 590 4.32e-18 90.5
MS.gene028274.t1 AT4G00900 29.032 186 98 4 783 934 609 794 6.09e-18 90.1
MS.gene028274.t1 AT4G00900 29.032 186 98 4 783 934 609 794 6.09e-18 90.1
MS.gene028274.t1 AT3G42640 22.144 569 336 16 429 934 133 657 1.32e-17 89.0
MS.gene028274.t1 AT4G29900 27.037 270 141 7 701 937 613 859 6.97e-17 86.7
MS.gene028274.t1 AT4G29900 27.037 270 141 7 701 937 613 859 6.97e-17 86.7
MS.gene028274.t1 AT4G37640 30.168 179 96 3 790 939 649 827 7.50e-17 86.7
MS.gene028274.t1 AT3G63380 29.670 182 95 2 789 937 640 821 2.89e-16 84.7
MS.gene028274.t1 AT2G22950 30.168 179 96 3 790 939 650 828 4.65e-16 84.0
MS.gene028274.t1 AT3G22910 30.435 184 95 4 789 939 636 819 5.43e-16 83.6
MS.gene028274.t1 AT5G57110 28.415 183 98 2 788 937 673 855 9.07e-16 83.2
MS.gene028274.t1 AT5G57110 28.415 183 98 2 788 937 673 855 9.07e-16 83.2
MS.gene028274.t1 AT5G57110 28.415 183 98 2 788 937 673 855 9.07e-16 83.2
MS.gene028274.t1 AT1G10130 27.684 177 97 1 789 934 582 758 1.19e-15 82.4
MS.gene028274.t1 AT2G24520 23.724 392 233 8 610 948 26 404 1.24e-15 82.0
MS.gene028274.t1 AT3G21180 23.154 596 327 21 458 937 292 872 1.27e-15 82.4
MS.gene028274.t1 AT5G57350 23.969 388 212 10 610 934 26 393 2.23e-14 78.2

Find 236 sgRNAs with CRISPR-Local

Find 460 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTCCTGCAACAGCTTTAT+TGG 0.127790 4.2:-17097928 MS.gene028274:CDS
CTTCTGTATGGCGCTCTTAC+TGG 0.137276 4.2:-17098074 MS.gene028274:CDS
TGTATTGTTGGGAAAGTATT+TGG 0.165698 4.2:-17098003 MS.gene028274:CDS
TTAATTCATTGGCATCATTT+TGG 0.206497 4.2:+17095460 None:intergenic
GGAGTATTGATTGGAGTCTT+AGG 0.229752 4.2:-17095067 MS.gene028274:CDS
TCAGATTCCCCTCTTCTTCA+TGG 0.235078 4.2:-17098324 MS.gene028274:intron
ATGGCGCTCTTACTGGATTT+TGG 0.241881 4.2:-17098067 MS.gene028274:CDS
GGTTGTAGGTGTTTGTTCTT+TGG 0.247236 4.2:-17099060 MS.gene028274:CDS
GAATGGGAGCTTTGGACATC+TGG 0.249424 4.2:+17097426 None:intergenic
GAGTTCTACTAGCTTCTTAA+TGG 0.251062 4.2:+17097950 None:intergenic
TATAGAGGGCCTCCAGAAAA+TGG 0.253304 4.2:-17095008 MS.gene028274:CDS
CTTGAGTCAGATAATTAATT+TGG 0.256617 4.2:-17097459 MS.gene028274:CDS
TTTGGTGGATGCAAGGGTTT+TGG 0.266860 4.2:-17099042 MS.gene028274:CDS
AACAATGGTGTGTTAATTAA+AGG 0.285608 4.2:-17095989 MS.gene028274:CDS
TCATGGTGGCAACAGGTGTT+GGG 0.293408 4.2:-17096015 MS.gene028274:CDS
TTGGTGAGTGTCATTCAATT+TGG 0.297350 4.2:-17098212 MS.gene028274:CDS
CACCATCTGAGCTCTTTCTA+AGG 0.299600 4.2:+17095958 None:intergenic
CCGCTGATGGTATTGTTACC+TGG 0.303580 4.2:-17097625 MS.gene028274:CDS
TGTGTTGATGAGAGATAATT+TGG 0.310034 4.2:-17094289 MS.gene028274:CDS
ATGCACTGCACACCCCTTCC+TGG 0.312304 4.2:+17095396 None:intergenic
GCTTATAACATTTGTATTGT+TGG 0.323122 4.2:-17098015 MS.gene028274:CDS
CGCTGATGGTATTGTTACCT+GGG 0.329723 4.2:-17097624 MS.gene028274:CDS
GGCCTTTCCTCATGGATGAT+TGG 0.331728 4.2:-17098247 MS.gene028274:CDS
TCTTCTTTGCTTATCACGTT+TGG 0.333112 4.2:+17099161 None:intergenic
TTATCTCCTGTAACCATTAC+AGG 0.336285 4.2:+17094977 None:intergenic
CATGGATGTCCTTGTTGCTT+TGG 0.338225 4.2:-17098132 MS.gene028274:CDS
AGGTATACTGCTGGGGCTCT+TGG 0.348034 4.2:-17096160 MS.gene028274:CDS
ACTCATCAAAGAAGTGAAAA+TGG 0.349385 4.2:+17095502 None:intergenic
CTTATAACATTTGTATTGTT+GGG 0.352878 4.2:-17098014 MS.gene028274:CDS
GTACTATCTCCAACCGGTTT+AGG 0.354063 4.2:+17099323 None:intergenic
TGGTGAGTGTCATTCAATTT+GGG 0.354358 4.2:-17098211 MS.gene028274:CDS
AGGTTGGCATTCAAGATGTT+AGG 0.358093 4.2:-17094482 MS.gene028274:CDS
TCTGTTGCCAAGGTGTTTGC+AGG 0.360309 4.2:-17095881 MS.gene028274:CDS
TTAGAAGCCATTCTCGCATA+AGG 0.362030 4.2:+17098858 None:intergenic
CAGAGAGTTCGTCTATGTTT+CGG 0.362552 4.2:-17098827 MS.gene028274:CDS
GTGGCTTTAGCTACTTCATT+AGG 0.364293 4.2:-17099200 MS.gene028274:CDS
CAGATTCCCCTCTTCTTCAT+GGG 0.370257 4.2:-17098323 MS.gene028274:CDS
GAGTATTGATTGGAGTCTTA+GGG 0.372614 4.2:-17095066 MS.gene028274:CDS
TCAGACTTCTCTGCTATTCC+AGG 0.372749 4.2:-17095414 MS.gene028274:CDS
ATCACGCCTGTAATGGTTAC+AGG 0.374551 4.2:-17094983 MS.gene028274:CDS
GATGCCAATGAATTAAAATC+AGG 0.379078 4.2:-17095453 MS.gene028274:CDS
CGACGGAATTAACCGGATTC+AGG 0.380567 4.2:-17099667 MS.gene028274:CDS
AAGCTTCCACCATGGGTTGC+TGG 0.384722 4.2:-17094132 MS.gene028274:CDS
TCATATACTCGTTATTACTT+TGG 0.386797 4.2:-17098277 MS.gene028274:CDS
AGCTGAGATCTTACATGAAC+CGG 0.387930 4.2:-17099357 MS.gene028274:CDS
AATGACAGAGCTACAATTGT+AGG 0.388212 4.2:+17096305 None:intergenic
GCTTTCAGAGCTCTTAGAAA+TGG 0.390325 4.2:-17098164 MS.gene028274:CDS
CCGTGGAGAATTTCTTAAAC+TGG 0.391473 4.2:-17095852 MS.gene028274:CDS
TCTGTTTGTGCTCTTCTGTA+TGG 0.392307 4.2:-17098086 MS.gene028274:CDS
TATAGACGGACAGCGTGTTT+TGG 0.392640 4.2:-17095373 MS.gene028274:intron
TGAAAGGGGTGAGGCAGTTT+CGG 0.402464 4.2:-17099001 MS.gene028274:CDS
ATGGATGTCCTTGTTGCTTT+GGG 0.403864 4.2:-17098131 MS.gene028274:CDS
GGTTTCAACCGGACCTAAAC+CGG 0.406822 4.2:-17099336 MS.gene028274:CDS
AAGTTATGTAAATGAGAGTA+TGG 0.407246 4.2:-17097597 MS.gene028274:CDS
CAACAGATATAGAAAACATA+AGG 0.407868 4.2:+17096086 None:intergenic
ACAACCAATAAAGCTGTTGC+AGG 0.410607 4.2:+17097924 None:intergenic
GTCATGGTGGCAACAGGTGT+TGG 0.416154 4.2:-17096016 MS.gene028274:CDS
AGTAATAACGAGTATATGAA+TGG 0.419114 4.2:+17098281 None:intergenic
TAATGGTTACAGGAGATAAC+TGG 0.422229 4.2:-17094973 MS.gene028274:CDS
GTTCTGATCAGGTTGGTAAC+AGG 0.435074 4.2:-17095192 MS.gene028274:intron
TAGAAGCCATTCTCGCATAA+GGG 0.435660 4.2:+17098859 None:intergenic
TTGCCGTACCAGTTGCTGCC+GGG 0.437758 4.2:-17094179 MS.gene028274:CDS
TCTATTTCTCTTTCTTCCAC+AGG 0.437986 4.2:+17097704 None:intergenic
AATAAAACCCCGGCAGCAAC+TGG 0.442685 4.2:+17094171 None:intergenic
ATCTCCAACCGGTTTAGGTC+CGG 0.444101 4.2:+17099328 None:intergenic
AGAAGCTTCTGTTGTTATAG+AGG 0.445207 4.2:-17095023 MS.gene028274:CDS
ATGCCCATGTGCACTTGGTT+TGG 0.446212 4.2:-17096053 MS.gene028274:CDS
GCATTGATCTCCTTCGAAAC+AGG 0.451969 4.2:+17097557 None:intergenic
TGCCAAGGTGTTTGCAGGAA+TGG 0.454986 4.2:-17095876 MS.gene028274:CDS
TCAAGTATTGTAGTAAGTCT+TGG 0.455124 4.2:+17094042 None:intergenic
GAGATCAATGCATCTGTCAT+TGG 0.457423 4.2:-17097545 MS.gene028274:CDS
AGTGTCATTCAATTTGGGAT+TGG 0.457590 4.2:-17098206 MS.gene028274:CDS
GCGAGAATGGCTTCTAAAGA+TGG 0.457955 4.2:-17098852 MS.gene028274:CDS
TTACATGAACCGGTTTCAAC+CGG 0.457960 4.2:-17099347 MS.gene028274:CDS
GTCATTTAAAATTCCTTCAA+CGG 0.461784 4.2:+17099247 None:intergenic
CTTGAAGAAAGTGCCAAGAC+TGG 0.462679 4.2:-17095109 MS.gene028274:CDS
TGGTACGGCAATAATATTGT+AGG 0.462863 4.2:+17094191 None:intergenic
GTTATTGCAATTGAAGATGC+AGG 0.464292 4.2:-17099134 MS.gene028274:CDS
TGTAGGTGTTTGTTCTTTGG+TGG 0.464503 4.2:-17099057 MS.gene028274:CDS
TCAACGACGACGGAATTAAC+CGG 0.465540 4.2:-17099674 MS.gene028274:CDS
TTTGTTCTTTGGTGGATGCA+AGG 0.466118 4.2:-17099049 MS.gene028274:CDS
GGTTTAGGTCCGGTTGAAAC+CGG 0.466163 4.2:+17099338 None:intergenic
GACTGTATCGGATCCTACTT+TGG 0.467006 4.2:+17097481 None:intergenic
AAGAATGCAATTGAAGATGC+AGG 0.469462 4.2:-17099386 MS.gene028274:CDS
GCAGATGTTGGTATGGCAAT+TGG 0.470750 4.2:-17094348 MS.gene028274:CDS
ATGGGTTGCTGGTGCATGCA+TGG 0.471253 4.2:-17094121 MS.gene028274:CDS
AGACATGAGAGCGGCTTCAA+CGG 0.471731 4.2:+17099605 None:intergenic
GCCGGAGTCATCGCCGGCGC+CGG 0.474208 4.2:+17099743 None:intergenic
TAGAAGCCCTTATGCGAGAA+TGG 0.476362 4.2:-17098865 MS.gene028274:CDS
CGGTGATTCTGACCTGAATC+CGG 0.483249 4.2:+17099655 None:intergenic
AGTTCTTAGTTCTAGATCGT+TGG 0.488758 4.2:-17098934 MS.gene028274:CDS
GAGATGTGGGCCTTTCCTCA+TGG 0.488956 4.2:-17098255 MS.gene028274:CDS
CGCTACAAGGATCCCAGTCT+TGG 0.489491 4.2:+17095096 None:intergenic
TCGTTATTACTTTGGAGATG+TGG 0.489608 4.2:-17098269 MS.gene028274:CDS
GTATGCTTAGTGGTATGAAA+GGG 0.490896 4.2:-17099016 MS.gene028274:CDS
ATTGCATGCCCATGTGCACT+TGG 0.493098 4.2:-17096058 MS.gene028274:CDS
AATGGGAATCACGCCTGTAA+TGG 0.494340 4.2:-17094990 MS.gene028274:CDS
CGGATTCAGGTCAGAATCAC+CGG 0.498291 4.2:-17099654 MS.gene028274:CDS
AGTATGCTTAGTGGTATGAA+AGG 0.501872 4.2:-17099017 MS.gene028274:CDS
ATTGCCGTACCAGTTGCTGC+CGG 0.503085 4.2:-17094180 MS.gene028274:CDS
CGTTATTACTTTGGAGATGT+GGG 0.506990 4.2:-17098268 MS.gene028274:CDS
TGCCGTACCAGTTGCTGCCG+GGG 0.507352 4.2:-17094178 MS.gene028274:CDS
GCATTAGCTGCTGCAGATGT+TGG 0.507757 4.2:-17094360 MS.gene028274:CDS
AATGGGAGCTTTGGACATCT+GGG 0.508519 4.2:+17097427 None:intergenic
GTCGCCAAACCAAGTGCACA+TGG 0.508959 4.2:+17096049 None:intergenic
ATAGAGGGCCTCCAGAAAAT+GGG 0.509737 4.2:-17095007 MS.gene028274:CDS
GGCAATAATATTGTAGGCCA+TGG 0.510022 4.2:+17094197 None:intergenic
TACGTTATATTTGATAAGAC+AGG 0.512329 4.2:-17095932 MS.gene028274:CDS
GGAGTCATCGCCGGCGCCGG+TGG 0.512775 4.2:+17099746 None:intergenic
GTTGGTATGGCAATTGGAGC+TGG 0.513083 4.2:-17094342 MS.gene028274:CDS
GGTTGGCATTCAAGATGTTA+GGG 0.513253 4.2:-17094481 MS.gene028274:CDS
CATTCAAGATGTTAGGGCAG+AGG 0.513441 4.2:-17094475 MS.gene028274:CDS
GAAATATATACAAACCTCCT+TGG 0.514370 4.2:+17094931 None:intergenic
CATAAGTATTTCTACTGAAG+TGG 0.514915 4.2:-17095149 MS.gene028274:CDS
ACTGCTGTCATGGTGGCAAC+AGG 0.515401 4.2:-17096022 MS.gene028274:CDS
TTGTTCTTTGGTGGATGCAA+GGG 0.516975 4.2:-17099048 MS.gene028274:CDS
GATGAGTCCTCTCTTACCAA+TGG 0.518678 4.2:-17095486 MS.gene028274:CDS
CACATTAAAGCTACCAAAGT+AGG 0.519785 4.2:-17097494 MS.gene028274:CDS
AGGGCAGAGGTTATGCCTGC+AGG 0.519939 4.2:-17094462 MS.gene028274:CDS
AGAGGTTATGCCTGCAGGAA+AGG 0.525897 4.2:-17094457 MS.gene028274:CDS
ATACTCCATTGCACGCTACA+AGG 0.526385 4.2:+17095083 None:intergenic
GGCGACACCAACTGCTGTCA+TGG 0.527208 4.2:-17096032 MS.gene028274:CDS
ACCACATCAGCCTTTCCTGC+AGG 0.530022 4.2:+17094447 None:intergenic
CATGGTGGCAACAGGTGTTG+GGG 0.530178 4.2:-17096014 MS.gene028274:CDS
TAAGACAGGAACTCTAACTC+AGG 0.530527 4.2:-17095918 MS.gene028274:CDS
GTAATAACGAGTATATGAAT+GGG 0.531622 4.2:+17098282 None:intergenic
TGATTGGTTGAAGTGGGCAT+TGG 0.532100 4.2:-17098231 MS.gene028274:CDS
ATCCTTAGAAAGAGCTCAGA+TGG 0.532974 4.2:-17095960 MS.gene028274:CDS
GCAAGCGGCGCATGTCATGC+CGG 0.533829 4.2:+17099635 None:intergenic
CTTTGGTAGCTTTAATGTGA+AGG 0.535532 4.2:+17097498 None:intergenic
GGCATCAGATGTCTTCCCCT+TGG 0.535998 4.2:+17097971 None:intergenic
GATAATTAATTTGGTCGAGA+CGG 0.537531 4.2:-17097450 MS.gene028274:CDS
AACAGATATAGAAAACATAA+GGG 0.538427 4.2:+17096087 None:intergenic
AGATTCCCCTCTTCTTCATG+GGG 0.539845 4.2:-17098322 MS.gene028274:CDS
ACCGGCGCCGGCGATGACTC+CGG 0.540319 4.2:-17099744 MS.gene028274:CDS
GAGTATATGAATGGGATATG+AGG 0.542597 4.2:+17098290 None:intergenic
GAAGCTTCTGTTGTTATAGA+GGG 0.546172 4.2:-17095022 MS.gene028274:CDS
GGGAATCAAGCTTCCACCAT+GGG 0.547653 4.2:-17094139 MS.gene028274:CDS
AGGAAGCTGCTGGTGGAAAG+TGG 0.550070 4.2:-17095172 MS.gene028274:CDS
AACTGCTCGAGCTGTTGCCA+AGG 0.550725 4.2:-17094948 MS.gene028274:CDS
ATTTACATAACTTGAGCCCC+AGG 0.551493 4.2:+17097607 None:intergenic
ATTGAATTATGTATTTGCCA+TGG 0.551910 4.2:-17094214 MS.gene028274:CDS
AAGGACACCATGCAAATTGA+TGG 0.553347 4.2:+17097517 None:intergenic
GTGGAAGTTAGTTGAATACT+CGG 0.553506 4.2:+17099765 None:intergenic
AGATGGTAGTATAGTTGCAA+TGG 0.554431 4.2:-17094409 MS.gene028274:CDS
AGCCACTGTCTCTGTTGCCA+AGG 0.554586 4.2:-17095891 MS.gene028274:CDS
TTGGGATCCATTGGTAAGAG+AGG 0.555619 4.2:+17095479 None:intergenic
CAACTAACTTCCACCGGCGC+CGG 0.556089 4.2:-17099756 MS.gene028274:CDS
TTCTCTGCTATTCCAGGAAG+GGG 0.557195 4.2:-17095408 MS.gene028274:CDS
TGGTAGTATAGTTGCAATGG+TGG 0.558345 4.2:-17094406 MS.gene028274:CDS
GGCTAGCAGTGAACACCCGC+TGG 0.559219 4.2:-17095550 MS.gene028274:CDS
GCGTGCAATGGAGTATTGAT+TGG 0.559641 4.2:-17095076 MS.gene028274:CDS
ACCACCGTACTATCTCCAAC+CGG 0.560837 4.2:+17099317 None:intergenic
GCGTGTGTGAATTCCGTTGA+AGG 0.561783 4.2:-17099260 MS.gene028274:CDS
ACATCTGCAGCAGCTAATGC+AGG 0.562486 4.2:+17094363 None:intergenic
TAAACTGGTGGCTTCTGCTG+AGG 0.563783 4.2:-17095837 MS.gene028274:intron
GGGATCCTTGTAGCGTGCAA+TGG 0.564317 4.2:-17095088 MS.gene028274:CDS
AATGGTGTGTTAATTAAAGG+AGG 0.566500 4.2:-17095986 MS.gene028274:CDS
GCGAACATCTTCGAGATCGC+CGG 0.566672 4.2:+17099725 None:intergenic
GGTTGGTAACAGGAAGCTGC+TGG 0.567598 4.2:-17095182 MS.gene028274:CDS
CTTCTCTGCTATTCCAGGAA+GGG 0.570582 4.2:-17095409 MS.gene028274:CDS
GTATTTGGAATGTCTTGCCA+AGG 0.571096 4.2:-17097988 MS.gene028274:CDS
TCATGGATGATTGGTTGAAG+TGG 0.573589 4.2:-17098238 MS.gene028274:CDS
TTGAAGAAAGTGCCAAGACT+GGG 0.574392 4.2:-17095108 MS.gene028274:CDS
GTCACTAGGTTGAATAAGCA+AGG 0.575805 4.2:+17097679 None:intergenic
CATTATTGACACTATTGTGT+TGG 0.576900 4.2:-17096286 MS.gene028274:intron
GCCGCTCTCATGTCTGTCGA+CGG 0.577918 4.2:-17099597 MS.gene028274:CDS
TTGGAGCATACCCAGATGAA+TGG 0.578362 4.2:-17096141 MS.gene028274:CDS
ACTTCTCTGCTATTCCAGGA+AGG 0.579821 4.2:-17095410 MS.gene028274:CDS
CAGGTAACAATACCATCAGC+GGG 0.580491 4.2:+17097626 None:intergenic
GGTACAAAGATTCCCGCTGA+TGG 0.580974 4.2:-17097638 MS.gene028274:CDS
GATCTAGAACTAAGAACTTG+AGG 0.581982 4.2:+17098939 None:intergenic
ATGCCAATGAATTAAAATCA+GGG 0.582049 4.2:-17095452 MS.gene028274:CDS
TAGAAATGGTTCAACAAACA+TGG 0.582828 4.2:-17098150 MS.gene028274:CDS
AGCTGCTGCAGATGTTGGTA+TGG 0.585708 4.2:-17094355 MS.gene028274:CDS
TGCTCGAGCTGTTGCCAAGG+AGG 0.585770 4.2:-17094945 MS.gene028274:intron
TCAGCGGGAATCTTTGTACC+AGG 0.585900 4.2:+17097641 None:intergenic
GTCCATTCCTGCAAACACCT+TGG 0.586968 4.2:+17095874 None:intergenic
GGAGGTACCATCAATTTGCA+TGG 0.587008 4.2:-17097524 MS.gene028274:CDS
GAGATCGCCGGAGTCATCGC+CGG 0.588833 4.2:+17099737 None:intergenic
TGGAGAATTTCTTAAACTGG+TGG 0.589048 4.2:-17095849 MS.gene028274:CDS
AGTATTCAACTAACTTCCAC+CGG 0.589297 4.2:-17099762 MS.gene028274:CDS
AACCCCGGCAGCAACTGGTA+CGG 0.593335 4.2:+17094176 None:intergenic
TTATTGGTTGTTAAAGACAA+AGG 0.593463 4.2:-17097912 MS.gene028274:intron
TATTTGGAATGTCTTGCCAA+GGG 0.598379 4.2:-17097987 MS.gene028274:CDS
GCCTGCAGGAAAGGCTGATG+TGG 0.598442 4.2:-17094448 MS.gene028274:CDS
AACCAATCATCCATGAGGAA+AGG 0.599373 4.2:+17098245 None:intergenic
TTCAACGGAATTAGAGCAAG+CGG 0.601444 4.2:+17099620 None:intergenic
ATGCATGCACCAGCAACCCA+TGG 0.601867 4.2:+17094123 None:intergenic
TATGCTTAGTGGTATGAAAG+GGG 0.608048 4.2:-17099015 MS.gene028274:CDS
GACACATTAAAAGTTCTGCC+TGG 0.608452 4.2:-17097659 MS.gene028274:CDS
TCAACCGGACCTAAACCGGT+TGG 0.610393 4.2:-17099332 MS.gene028274:CDS
ATAGTTGCAATGGTGGGTGA+CGG 0.612936 4.2:-17094399 MS.gene028274:CDS
AGTATTGATTGGAGTCTTAG+GGG 0.613540 4.2:-17095065 MS.gene028274:CDS
TTGGTATGGCAATTGGAGCT+GGG 0.615027 4.2:-17094341 MS.gene028274:CDS
TAAACCGGTTGGAGATAGTA+CGG 0.617219 4.2:-17099321 MS.gene028274:CDS
CGAGTCTATACCTGTTTCGA+AGG 0.617498 4.2:-17097567 MS.gene028274:CDS
ATCAATGCATCTGTCATTGG+AGG 0.619885 4.2:-17097542 MS.gene028274:CDS
CTGTAGTTCCCAAAGCAACA+AGG 0.623003 4.2:+17098123 None:intergenic
ACAGGTGTTGGGGCTAACAA+TGG 0.625686 4.2:-17096004 MS.gene028274:CDS
GGAAGCTTGATTCCCAGTGA+AGG 0.626009 4.2:+17094147 None:intergenic
CATGGATGATTGGTTGAAGT+GGG 0.626764 4.2:-17098237 MS.gene028274:CDS
TGGTAACAGGAAGCTGCTGG+TGG 0.634413 4.2:-17095179 MS.gene028274:CDS
CCAGGTAACAATACCATCAG+CGG 0.638825 4.2:+17097625 None:intergenic
GTTTCTATTGAAAACAACGT+CGG 0.639242 4.2:+17099536 None:intergenic
GTGGTTGGACAGTTCACGAT+CGG 0.640067 4.2:-17099299 MS.gene028274:CDS
TATCTGACTCAAGACTGTAT+CGG 0.640076 4.2:+17097469 None:intergenic
ACTCACACTAAGAAGCAAGC+TGG 0.641334 4.2:+17098794 None:intergenic
CACCTTGGCAACAGAGACAG+TGG 0.642911 4.2:+17095889 None:intergenic
TTTCAATAGAAACCTCGTCA+AGG 0.646421 4.2:-17099526 MS.gene028274:intron
AAGACAGGAACTCTAACTCA+GGG 0.647613 4.2:-17095917 MS.gene028274:CDS
GATTCCCCTCTTCTTCATGG+GGG 0.647766 4.2:-17098321 MS.gene028274:CDS
GTTGGAGATAGTACGGTGGT+TGG 0.649965 4.2:-17099314 MS.gene028274:CDS
CATGCACCAGCAACCCATGG+TGG 0.653724 4.2:+17094126 None:intergenic
GGTGTGCAGTGCATTATAGA+CGG 0.653890 4.2:-17095387 MS.gene028274:CDS
GTAAATGAGAGTATGGTGAC+TGG 0.657765 4.2:-17097590 MS.gene028274:CDS
ATTAGAGTTAAACCTTGACG+AGG 0.658358 4.2:+17099514 None:intergenic
TGGGAATCAAGCTTCCACCA+TGG 0.659512 4.2:-17094140 MS.gene028274:CDS
ATTTGGAATGTCTTGCCAAG+GGG 0.662416 4.2:-17097986 MS.gene028274:CDS
CCAGTTTAAGAAATTCTCCA+CGG 0.666614 4.2:+17095852 None:intergenic
ACATTAAGCTCACTCAACAA+AGG 0.672540 4.2:+17098972 None:intergenic
TTAGTGGTATGAAAGGGGTG+AGG 0.677514 4.2:-17099010 MS.gene028274:CDS
GTTGGACAGTTCACGATCGG+CGG 0.678514 4.2:-17099296 MS.gene028274:CDS
GGTAGTATAGTTGCAATGGT+GGG 0.680572 4.2:-17094405 MS.gene028274:CDS
TCGCCAAACCAAGTGCACAT+GGG 0.686508 4.2:+17096050 None:intergenic
GTGTTTGCAGGAATGGACCG+TGG 0.689642 4.2:-17095869 MS.gene028274:CDS
GATCGGCGGTATGACATGTG+CGG 0.691196 4.2:-17099282 MS.gene028274:CDS
GACACCAACTGCTGTCATGG+TGG 0.692490 4.2:-17096029 MS.gene028274:CDS
GTTGCCACCATGACAGCAGT+TGG 0.695583 4.2:+17096025 None:intergenic
CAGTGAAGGAAATAAAACCC+CGG 0.701022 4.2:+17094161 None:intergenic
GCTGATGGTATTGTTACCTG+GGG 0.702676 4.2:-17097623 MS.gene028274:CDS
TGGAATAGCAGAGAAGTCTG+AGG 0.707769 4.2:+17095416 None:intergenic
CCAATGAATTAAAATCAGGG+TGG 0.720072 4.2:-17095449 MS.gene028274:CDS
ACTTCAACCAATCATCCATG+AGG 0.728611 4.2:+17098240 None:intergenic
ACCGGTTGGAGATAGTACGG+TGG 0.764274 4.2:-17099318 MS.gene028274:CDS
ACCGTCGACAGACATGAGAG+CGG 0.766336 4.2:+17099596 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACATATTTTGTTTAAATTTT+AGG - chr4.2:17097617-17097636 MS.gene028274:CDS 10.0%
!!! TTTCTATAATATTTTCTTTT+TGG - chr4.2:17098885-17098904 MS.gene028274:CDS 10.0%
!! AAAAGAAAAGGAAAAAATAT+TGG + chr4.2:17096061-17096080 None:intergenic 15.0%
!! TTTATGAATAATTCTATGTA+AGG + chr4.2:17097267-17097286 None:intergenic 15.0%
!!! ATTGTTATTATCTTTAATGA+AGG - chr4.2:17098474-17098493 MS.gene028274:intron 15.0%
!!! TATAATATTTTCTTTTTGGT+TGG - chr4.2:17098889-17098908 MS.gene028274:CDS 15.0%
!! AAATATGGCTATAGATTAAA+GGG + chr4.2:17095031-17095050 None:intergenic 20.0%
!! AACAGATATAGAAAACATAA+GGG + chr4.2:17097713-17097732 None:intergenic 20.0%
!! ACAAGAAACTAAACAAAATA+AGG + chr4.2:17095406-17095425 None:intergenic 20.0%
!! ATAAACATGAGTTTGAATTA+TGG + chr4.2:17097334-17097353 None:intergenic 20.0%
!! CAAAATAACAAGAACAAATA+TGG + chr4.2:17095046-17095065 None:intergenic 20.0%
!! CAAGAAACTAAACAAAATAA+GGG + chr4.2:17095405-17095424 None:intergenic 20.0%
!! CTTATAACATTTGTATTGTT+GGG - chr4.2:17095783-17095802 MS.gene028274:intron 20.0%
!! TAAAATGCCAAAACATTATT+AGG + chr4.2:17098136-17098155 None:intergenic 20.0%
!! TACACTATCTATTGAAATTT+GGG + chr4.2:17096824-17096843 None:intergenic 20.0%
!! TTACACTATCTATTGAAATT+TGG + chr4.2:17096825-17096844 None:intergenic 20.0%
!!! ATGACAGTTATAACAAATTT+TGG - chr4.2:17099241-17099260 MS.gene028274:CDS 20.0%
!!! ATTCAACAGAGTTTTATATT+AGG + chr4.2:17096933-17096952 None:intergenic 20.0%
!!! CATATTTGTTCTTGTTATTT+TGG - chr4.2:17095044-17095063 MS.gene028274:CDS 20.0%
!!! GTGTTTTGGTAATTTTTTTT+TGG - chr4.2:17098438-17098457 MS.gene028274:intron 20.0%
!!! TGACAGTTATAACAAATTTT+GGG - chr4.2:17099242-17099261 MS.gene028274:CDS 20.0%
!!! TTATTGATTCCAATTATTTC+AGG - chr4.2:17097296-17097315 MS.gene028274:intron 20.0%
! AAAATATGTACACAGAAGTA+AGG + chr4.2:17097606-17097625 None:intergenic 25.0%
! AAAATATTGTTCTGACTCTA+CGG + chr4.2:17097215-17097234 None:intergenic 25.0%
! AACAATGGTGTGTTAATTAA+AGG - chr4.2:17097808-17097827 MS.gene028274:intron 25.0%
! AACCTAAATATAAGACAATC+AGG + chr4.2:17095975-17095994 None:intergenic 25.0%
! AAGTTATGTAAATGAGAGTA+TGG - chr4.2:17096200-17096219 MS.gene028274:intron 25.0%
! AATGTATCTTAAGTCATTTG+TGG + chr4.2:17097421-17097440 None:intergenic 25.0%
! ACACTATCTATTGAAATTTG+GGG + chr4.2:17096823-17096842 None:intergenic 25.0%
! ACTAAGTAAAAATGCATACA+TGG + chr4.2:17097035-17097054 None:intergenic 25.0%
! AGTAATAACGAGTATATGAA+TGG + chr4.2:17095519-17095538 None:intergenic 25.0%
! AGTATGATTAAAACCATAAC+TGG - chr4.2:17099072-17099091 MS.gene028274:CDS 25.0%
! ATGCCAATGAATTAAAATCA+GGG - chr4.2:17098345-17098364 MS.gene028274:intron 25.0%
! ATTCTTAATATCTTCATCCT+AGG + chr4.2:17094397-17094416 None:intergenic 25.0%
! ATTGAATTATGTATTTGCCA+TGG - chr4.2:17099583-17099602 MS.gene028274:CDS 25.0%
! CAAATATGGCTATAGATTAA+AGG + chr4.2:17095032-17095051 None:intergenic 25.0%
! CAACAGATATAGAAAACATA+AGG + chr4.2:17097714-17097733 None:intergenic 25.0%
! CATACAGAAATTTCATCTAA+CGG - chr4.2:17095280-17095299 MS.gene028274:intron 25.0%
! CTTGAGTCAGATAATTAATT+TGG - chr4.2:17096338-17096357 MS.gene028274:intron 25.0%
! GCTTATAACATTTGTATTGT+TGG - chr4.2:17095782-17095801 MS.gene028274:intron 25.0%
! GTAATAACGAGTATATGAAT+GGG + chr4.2:17095518-17095537 None:intergenic 25.0%
! TAAGATACATTAACTAACTC+AGG - chr4.2:17097430-17097449 MS.gene028274:CDS 25.0%
! TACGTTATATTTGATAAGAC+AGG - chr4.2:17097865-17097884 MS.gene028274:intron 25.0%
! TATTGAAATGTTTAAACCCT+AGG - chr4.2:17094377-17094396 MS.gene028274:CDS 25.0%
! TCATATACTCGTTATTACTT+TGG - chr4.2:17095520-17095539 MS.gene028274:CDS 25.0%
! TTCTTAATATCTTCATCCTA+GGG + chr4.2:17094396-17094415 None:intergenic 25.0%
!! ATAATCAGCAAACTTTTGAA+TGG + chr4.2:17096391-17096410 None:intergenic 25.0%
!! CAACTTTCCTAATAATGTTT+TGG - chr4.2:17098126-17098145 MS.gene028274:CDS 25.0%
!! GTATGCATTTTTACTTAGTT+TGG - chr4.2:17097036-17097055 MS.gene028274:intron 25.0%
!! GTCATTTAAAATTCCTTCAA+CGG + chr4.2:17094553-17094572 None:intergenic 25.0%
!! TAATCAGCAAACTTTTGAAT+GGG + chr4.2:17096390-17096409 None:intergenic 25.0%
!! TAATGAAGGAATATGTTTTG+TGG - chr4.2:17098488-17098507 MS.gene028274:intron 25.0%
!! TAATTCATTGGCATCATTTT+GGG + chr4.2:17098339-17098358 None:intergenic 25.0%
!! TATGTTTTCTATATCTGTTG+TGG - chr4.2:17097714-17097733 MS.gene028274:CDS 25.0%
!! TGTTTTATGTCTTTTATAGC+TGG + chr4.2:17098065-17098084 None:intergenic 25.0%
!! TGTTTTCTTAAGAAAATGGA+GGG - chr4.2:17095935-17095954 MS.gene028274:CDS 25.0%
!! TTAATTCATTGGCATCATTT+TGG + chr4.2:17098340-17098359 None:intergenic 25.0%
!! TTATTGGTTGTTAAAGACAA+AGG - chr4.2:17095885-17095904 MS.gene028274:CDS 25.0%
!! TTGATTTTCTTGTGCATAAA+AGG - chr4.2:17099115-17099134 MS.gene028274:CDS 25.0%
!! TTGTTTTCTTAAGAAAATGG+AGG - chr4.2:17095934-17095953 MS.gene028274:CDS 25.0%
!! TTTTCCTTTTCTTTTCTAGA+TGG - chr4.2:17096066-17096085 MS.gene028274:CDS 25.0%
!!! AAGAAAATGTGTTTTTTGAC+AGG - chr4.2:17099295-17099314 MS.gene028274:CDS 25.0%
!!! ATTCCAATTATTTCAGGTTT+AGG - chr4.2:17097302-17097321 MS.gene028274:intron 25.0%
!!! ATTTAGGTTGAAATTAGTGA+TGG - chr4.2:17095986-17096005 MS.gene028274:CDS 25.0%
!!! CTTTTCTTAAGAGTTGATAA+AGG - chr4.2:17098540-17098559 MS.gene028274:intron 25.0%
!!! GCTTTGTTTTCTTAAGAAAA+TGG - chr4.2:17095931-17095950 MS.gene028274:CDS 25.0%
!!! GTTTGTTTAGTTACTGATTT+TGG - chr4.2:17094350-17094369 MS.gene028274:CDS 25.0%
!!! TAAATTTTAGGTATACTGCT+GGG - chr4.2:17097629-17097648 MS.gene028274:CDS 25.0%
!!! TTAAATTTTAGGTATACTGC+TGG - chr4.2:17097628-17097647 MS.gene028274:CDS 25.0%
!!! TTTTGAGAGAGTATATAAAG+AGG - chr4.2:17096752-17096771 MS.gene028274:intron 25.0%
AAATATTGTTCTGACTCTAC+GGG + chr4.2:17097214-17097233 None:intergenic 30.0%
AAGCCTAAACCTGAAATAAT+TGG + chr4.2:17097308-17097327 None:intergenic 30.0%
AATGGTGTGTTAATTAAAGG+AGG - chr4.2:17097811-17097830 MS.gene028274:intron 30.0%
ACACCAGCAATAACTAAAAA+TGG + chr4.2:17097011-17097030 None:intergenic 30.0%
ACTCATCAAAGAAGTGAAAA+TGG + chr4.2:17098298-17098317 None:intergenic 30.0%
ACTTTCTTTACCACAAAGAA+TGG + chr4.2:17097065-17097084 None:intergenic 30.0%
ATTGATGTTATGGTCAAACT+TGG - chr4.2:17099270-17099289 MS.gene028274:CDS 30.0%
ATTTCTATGATGCCTATTAG+AGG - chr4.2:17098173-17098192 MS.gene028274:CDS 30.0%
CACAAATTAATGCAAAAGCA+TGG + chr4.2:17095438-17095457 None:intergenic 30.0%
CATTATTGACACTATTGTGT+TGG - chr4.2:17097511-17097530 MS.gene028274:CDS 30.0%
CGTTAGATGAAATTTCTGTA+TGG + chr4.2:17095282-17095301 None:intergenic 30.0%
CTAACTCATCCTTAAAAAAC+CGG + chr4.2:17096799-17096818 None:intergenic 30.0%
CTATAAAAAAAACGATGACG+CGG + chr4.2:17095314-17095333 None:intergenic 30.0%
CTGATACCGTGTTAAAATTT+GGG + chr4.2:17096618-17096637 None:intergenic 30.0%
GAAATATATACAAACCTCCT+TGG + chr4.2:17098869-17098888 None:intergenic 30.0%
GATGCCAATGAATTAAAATC+AGG - chr4.2:17098344-17098363 MS.gene028274:intron 30.0%
GTCCTGATTGTCTTATATTT+AGG - chr4.2:17095970-17095989 MS.gene028274:CDS 30.0%
GTTTCTATTGAAAACAACGT+CGG + chr4.2:17094264-17094283 None:intergenic 30.0%
TAGAAATGGTTCAACAAACA+TGG - chr4.2:17095647-17095666 MS.gene028274:intron 30.0%
TATAAAACTATCCCTATCCA+CGG + chr4.2:17099036-17099055 None:intergenic 30.0%
TCTGATACCGTGTTAAAATT+TGG + chr4.2:17096619-17096638 None:intergenic 30.0%
TGATACCGTGTTAAAATTTG+GGG + chr4.2:17096617-17096636 None:intergenic 30.0%
TTATGCACAAGAAAATCAAC+AGG + chr4.2:17099114-17099133 None:intergenic 30.0%
TTATGGAGCATAAAATTCAG+TGG + chr4.2:17095239-17095258 None:intergenic 30.0%
TTGGCTATATTATGCAATGT+AGG + chr4.2:17096865-17096884 None:intergenic 30.0%
TTTCCCAATACTATCAATGT+AGG + chr4.2:17096495-17096514 None:intergenic 30.0%
! ACTGAATTTTATGCTCCATA+AGG - chr4.2:17095238-17095257 MS.gene028274:intron 30.0%
! AGTCAAGATGAGATTGTTTT+AGG - chr4.2:17094714-17094733 MS.gene028274:intron 30.0%
! CAACTATACTACCATCTTTT+TGG + chr4.2:17099385-17099404 None:intergenic 30.0%
! CATAAGTATTTCTACTGAAG+TGG - chr4.2:17098648-17098667 MS.gene028274:intron 30.0%
! CTGAATTTTATGCTCCATAA+GGG - chr4.2:17095239-17095258 MS.gene028274:intron 30.0%
! GATAATTAATTTGGTCGAGA+CGG - chr4.2:17096347-17096366 MS.gene028274:intron 30.0%
! GGAATTTTAAATGACATCAC+CGG - chr4.2:17094558-17094577 MS.gene028274:intron 30.0%
! GTTTTCTTAAGAAAATGGAG+GGG - chr4.2:17095936-17095955 MS.gene028274:CDS 30.0%
! TCAAGTATTGTAGTAAGTCT+TGG + chr4.2:17099758-17099777 None:intergenic 30.0%
! TGCTGATTATGTAAGTATTG+TGG - chr4.2:17096401-17096420 MS.gene028274:intron 30.0%
! TGCTTTAAACTCAAACCTTA+GGG - chr4.2:17095164-17095183 MS.gene028274:CDS 30.0%
! TGTGTTGATGAGAGATAATT+TGG - chr4.2:17099508-17099527 MS.gene028274:intron 30.0%
! TTTTATCGTAGGAATCTAGT+AGG + chr4.2:17094097-17094116 None:intergenic 30.0%
!! AAATTTTAGGTATACTGCTG+GGG - chr4.2:17097630-17097649 MS.gene028274:CDS 30.0%
!! ACAAAGTGGTTTCCATTTTT+CGG + chr4.2:17097685-17097704 None:intergenic 30.0%
!! AGAACTTTTAATGTGTCACT+AGG + chr4.2:17096135-17096154 None:intergenic 30.0%
!! ATACTGTTGATTCCTCTAAT+AGG + chr4.2:17098188-17098207 None:intergenic 30.0%
!! GTCAAGATGAGATTGTTTTA+GGG - chr4.2:17094715-17094734 MS.gene028274:intron 30.0%
!! TAATTTTGAGTGCAGTTTCA+AGG - chr4.2:17098925-17098944 MS.gene028274:CDS 30.0%
!! TGTATTGTTGGGAAAGTATT+TGG - chr4.2:17095794-17095813 MS.gene028274:intron 30.0%
!!! AAATGTGTTTTTTGACAGGT+TGG - chr4.2:17099299-17099318 MS.gene028274:CDS 30.0%
!!! CTTCCATTTTTAGTTATTGC+TGG - chr4.2:17097005-17097024 MS.gene028274:intron 30.0%
!!! TCAAGATGAGATTGTTTTAG+GGG - chr4.2:17094716-17094735 MS.gene028274:intron 30.0%
!!! TTTGTTTTGAAGTAAAGCGA+CGG + chr4.2:17094240-17094259 None:intergenic 30.0%
AAGAATGCAATTGAAGATGC+AGG - chr4.2:17094411-17094430 MS.gene028274:CDS 35.0%
AATATAGCCAATCCAAAGCT+TGG - chr4.2:17096874-17096893 MS.gene028274:intron 35.0%
AATGACAGAGCTACAATTGT+AGG + chr4.2:17097495-17097514 None:intergenic 35.0%
ACATAAGGGCAAAAACAAAG+TGG + chr4.2:17097699-17097718 None:intergenic 35.0%
ACATTAAGCTCACTCAACAA+AGG + chr4.2:17094828-17094847 None:intergenic 35.0%
AGAAGCTTCTGTTGTTATAG+AGG - chr4.2:17098774-17098793 MS.gene028274:intron 35.0%
AGATGGTAGTATAGTTGCAA+TGG - chr4.2:17099388-17099407 MS.gene028274:CDS 35.0%
AGTATGCTTAGTGGTATGAA+AGG - chr4.2:17094780-17094799 MS.gene028274:intron 35.0%
AGTATTCAACTAACTTCCAC+CGG - chr4.2:17094035-17094054 MS.gene028274:CDS 35.0%
AGTTGAGCTCATTGTCAAAA+AGG + chr4.2:17098111-17098130 None:intergenic 35.0%
AGTTTGGATTCCATTCTTTG+TGG - chr4.2:17097052-17097071 MS.gene028274:intron 35.0%
ATAAAAACCATCCAAGAGCA+CGG + chr4.2:17096427-17096446 None:intergenic 35.0%
ATAGGCATCATAGAAATGCA+AGG + chr4.2:17098170-17098189 None:intergenic 35.0%
ATGAACTAATGCAACCCTTA+TGG + chr4.2:17095256-17095275 None:intergenic 35.0%
ATGTTCCATGCAAAAGATGT+TGG + chr4.2:17098974-17098993 None:intergenic 35.0%
ATTAGAGTTAAACCTTGACG+AGG + chr4.2:17094286-17094305 None:intergenic 35.0%
CAATACTATCAATGTAGGCA+GGG + chr4.2:17096490-17096509 None:intergenic 35.0%
CACATTAAAGCTACCAAAGT+AGG - chr4.2:17096303-17096322 MS.gene028274:CDS 35.0%
CCAATGAATTAAAATCAGGG+TGG - chr4.2:17098348-17098367 MS.gene028274:intron 35.0%
CCAGTTTAAGAAATTCTCCA+CGG + chr4.2:17097948-17097967 None:intergenic 35.0%
CTAACTCATCCTTACAAAAC+CGG + chr4.2:17096593-17096612 None:intergenic 35.0%
GAAGCTTCTGTTGTTATAGA+GGG - chr4.2:17098775-17098794 MS.gene028274:intron 35.0%
GAGTATATGAATGGGATATG+AGG + chr4.2:17095510-17095529 None:intergenic 35.0%
GTATGCTTAGTGGTATGAAA+GGG - chr4.2:17094781-17094800 MS.gene028274:intron 35.0%
GTGGAAGTTAGTTGAATACT+CGG + chr4.2:17094035-17094054 None:intergenic 35.0%
GTTATTGCAATTGAAGATGC+AGG - chr4.2:17094663-17094682 MS.gene028274:intron 35.0%
GTTCGTTCATTCCAAAAAGA+TGG - chr4.2:17099371-17099390 MS.gene028274:CDS 35.0%
TAATGGTTACAGGAGATAAC+TGG - chr4.2:17098824-17098843 MS.gene028274:CDS 35.0%
TATCTGACTCAAGACTGTAT+CGG + chr4.2:17096331-17096350 None:intergenic 35.0%
TATGCTTAGTGGTATGAAAG+GGG - chr4.2:17094782-17094801 MS.gene028274:intron 35.0%
TCCAAACGATTGCTTATTTG+AGG - chr4.2:17098576-17098595 MS.gene028274:intron 35.0%
TCCTCAAATAAGCAATCGTT+TGG + chr4.2:17098580-17098599 None:intergenic 35.0%
TCTGCCATCTAGAAAAGAAA+AGG + chr4.2:17096073-17096092 None:intergenic 35.0%
TCTTCTTTGCTTATCACGTT+TGG + chr4.2:17094639-17094658 None:intergenic 35.0%
TGAAAAACAAAATTGAGCCG+TGG - chr4.2:17099016-17099035 MS.gene028274:CDS 35.0%
TGGAGAATTTCTTAAACTGG+TGG - chr4.2:17097948-17097967 MS.gene028274:CDS 35.0%
TGGTACGGCAATAATATTGT+AGG + chr4.2:17099609-17099628 None:intergenic 35.0%
TTACATCAGCAGAATCAGAA+AGG + chr4.2:17095211-17095230 None:intergenic 35.0%
TTATCTCCTGTAACCATTAC+AGG + chr4.2:17098823-17098842 None:intergenic 35.0%
TTGGGCAGATATTGATGTTA+TGG - chr4.2:17099260-17099279 MS.gene028274:CDS 35.0%
TTTCAATAGAAACCTCGTCA+AGG - chr4.2:17094271-17094290 MS.gene028274:CDS 35.0%
! AAACTTTTGAATGGGAGCTT+TGG + chr4.2:17096382-17096401 None:intergenic 35.0%
! AACATCTTTTGCATGGAACA+TGG - chr4.2:17098973-17098992 MS.gene028274:CDS 35.0%
! AAGGAATATGTTTTGTGGAG+AGG - chr4.2:17098493-17098512 MS.gene028274:intron 35.0%
! AGGAATATGTTTTGTGGAGA+GGG - chr4.2:17098494-17098513 MS.gene028274:intron 35.0%
! AGTGTCATTCAATTTGGGAT+TGG - chr4.2:17095591-17095610 MS.gene028274:intron 35.0%
! CGTTATTACTTTGGAGATGT+GGG - chr4.2:17095529-17095548 MS.gene028274:CDS 35.0%
! CTGCCTACATTGATAGTATT+GGG - chr4.2:17096489-17096508 MS.gene028274:intron 35.0%
! CTGCTTTAAACTCAAACCTT+AGG - chr4.2:17095163-17095182 MS.gene028274:CDS 35.0%
! CTTGAGAAGAGTATAGAAAG+AGG - chr4.2:17096546-17096565 MS.gene028274:intron 35.0%
! GAAAACCAACATCTTTTGCA+TGG - chr4.2:17098966-17098985 MS.gene028274:CDS 35.0%
! GAGTTCTACTAGCTTCTTAA+TGG + chr4.2:17095850-17095869 None:intergenic 35.0%
! GATCTAGAACTAAGAACTTG+AGG + chr4.2:17094861-17094880 None:intergenic 35.0%
! TAACTCAGGTACCATTCTTT+TGG - chr4.2:17097444-17097463 MS.gene028274:CDS 35.0%
! TATTTGGAATGTCTTGCCAA+GGG - chr4.2:17095810-17095829 MS.gene028274:intron 35.0%
! TCGTTATTACTTTGGAGATG+TGG - chr4.2:17095528-17095547 MS.gene028274:CDS 35.0%
! TCTATTTCTCTTTCTTCCAC+AGG + chr4.2:17096096-17096115 None:intergenic 35.0%
! TGAGAGAGTATATAAAGAGG+AGG - chr4.2:17096755-17096774 MS.gene028274:intron 35.0%
! TGGTGAGTGTCATTCAATTT+GGG - chr4.2:17095586-17095605 MS.gene028274:intron 35.0%
! TTGACACTATTGTGTTGGTA+AGG - chr4.2:17097516-17097535 MS.gene028274:CDS 35.0%
! TTGGTGAGTGTCATTCAATT+TGG - chr4.2:17095585-17095604 MS.gene028274:intron 35.0%
!! AAATGGAAGTATTTCCCACT+AGG + chr4.2:17096994-17097013 None:intergenic 35.0%
!! AGTATTGATTGGAGTCTTAG+GGG - chr4.2:17098732-17098751 MS.gene028274:intron 35.0%
!! AGTTCTTAGTTCTAGATCGT+TGG - chr4.2:17094863-17094882 MS.gene028274:intron 35.0%
!! CTTTGGTAGCTTTAATGTGA+AGG + chr4.2:17096302-17096321 None:intergenic 35.0%
!! GAGTATTGATTGGAGTCTTA+GGG - chr4.2:17098731-17098750 MS.gene028274:intron 35.0%
!! TTAGGCCCCAAATTTTAACA+CGG - chr4.2:17096609-17096628 MS.gene028274:intron 35.0%
!!! CCACCCTGATTTTAATTCAT+TGG + chr4.2:17098351-17098370 None:intergenic 35.0%
!!! CGGTTTTTTAAGGATGAGTT+AGG - chr4.2:17096797-17096816 MS.gene028274:intron 35.0%
!!! GCAAAAGATGTTGGTTTTCT+AGG + chr4.2:17098965-17098984 None:intergenic 35.0%
!!! GTTTTGGAAAGTATGCTTAG+TGG - chr4.2:17094771-17094790 MS.gene028274:intron 35.0%
AAATTACCCCCATGAAGAAG+AGG + chr4.2:17095485-17095504 None:intergenic 40.0%
AACAAAATTGAGCCGTGGAT+AGG - chr4.2:17099021-17099040 MS.gene028274:CDS 40.0%
AACCAATCATCCATGAGGAA+AGG + chr4.2:17095555-17095574 None:intergenic 40.0%
AAGACAGGAACTCTAACTCA+GGG - chr4.2:17097880-17097899 MS.gene028274:intron 40.0%
AAGCAGAGAGTAACCATCAT+TGG + chr4.2:17097992-17098011 None:intergenic 40.0%
AAGGACACCATGCAAATTGA+TGG + chr4.2:17096283-17096302 None:intergenic 40.0%
AATCCAAAGCTTGGAGAAAG+AGG - chr4.2:17096883-17096902 MS.gene028274:intron 40.0%
AATTACCCCCATGAAGAAGA+GGG + chr4.2:17095484-17095503 None:intergenic 40.0%
ACAAAATTGAGCCGTGGATA+GGG - chr4.2:17099022-17099041 MS.gene028274:CDS 40.0%
ACAACCAATAAAGCTGTTGC+AGG + chr4.2:17095876-17095895 None:intergenic 40.0%
ACTTCAACCAATCATCCATG+AGG + chr4.2:17095560-17095579 None:intergenic 40.0%
AGCAGAGAGTAACCATCATT+GGG + chr4.2:17097991-17098010 None:intergenic 40.0%
AGCTGAGATCTTACATGAAC+CGG - chr4.2:17094440-17094459 MS.gene028274:CDS 40.0%
AGGTTGGCATTCAAGATGTT+AGG - chr4.2:17099315-17099334 MS.gene028274:CDS 40.0%
ATCAATGCATCTGTCATTGG+AGG - chr4.2:17096255-17096274 MS.gene028274:intron 40.0%
ATCAGAGCTTGTCGAATTCA+AGG - chr4.2:17096633-17096652 MS.gene028274:intron 40.0%
ATCAGCAGAATCAGAAAGGA+TGG + chr4.2:17095207-17095226 None:intergenic 40.0%
ATCCTTAGAAAGAGCTCAGA+TGG - chr4.2:17097837-17097856 MS.gene028274:intron 40.0%
ATTTACATAACTTGAGCCCC+AGG + chr4.2:17096193-17096212 None:intergenic 40.0%
CACAATGAGTTGCAAAGAGT+CGG - chr4.2:17097140-17097159 MS.gene028274:intron 40.0%
CAGAGAGTTCGTCTATGTTT+CGG - chr4.2:17094970-17094989 MS.gene028274:CDS 40.0%
CAGTGAAGGAAATAAAACCC+CGG + chr4.2:17099639-17099658 None:intergenic 40.0%
CATCACCGGAGTAAAAAAAG+CGG - chr4.2:17094572-17094591 MS.gene028274:intron 40.0%
CATTCTACACTAACACCCTA+AGG + chr4.2:17095182-17095201 None:intergenic 40.0%
CCAATACTATCAATGTAGGC+AGG + chr4.2:17096491-17096510 None:intergenic 40.0%
CCGTGGAGAATTTCTTAAAC+TGG - chr4.2:17097945-17097964 MS.gene028274:CDS 40.0%
CTCATTGTCAAAAAGGTGGA+AGG + chr4.2:17098104-17098123 None:intergenic 40.0%
CTTGAAAACGAGACCAGTTA+TGG + chr4.2:17099088-17099107 None:intergenic 40.0%
GAAGTATGTTCTGATCAGGT+TGG - chr4.2:17098598-17098617 MS.gene028274:intron 40.0%
GACACATTAAAAGTTCTGCC+TGG - chr4.2:17096138-17096157 MS.gene028274:CDS 40.0%
GAGATCAATGCATCTGTCAT+TGG - chr4.2:17096252-17096271 MS.gene028274:intron 40.0%
GCTTTCAGAGCTCTTAGAAA+TGG - chr4.2:17095633-17095652 MS.gene028274:intron 40.0%
GGCAATAATATTGTAGGCCA+TGG + chr4.2:17099603-17099622 None:intergenic 40.0%
GGTAGTATAGTTGCAATGGT+GGG - chr4.2:17099392-17099411 MS.gene028274:CDS 40.0%
GGTTGGCATTCAAGATGTTA+GGG - chr4.2:17099316-17099335 MS.gene028274:CDS 40.0%
GGTTGTAGGTGTTTGTTCTT+TGG - chr4.2:17094737-17094756 MS.gene028274:intron 40.0%
TAAACCGGTTGGAGATAGTA+CGG - chr4.2:17094476-17094495 MS.gene028274:CDS 40.0%
TAAGACAGGAACTCTAACTC+AGG - chr4.2:17097879-17097898 MS.gene028274:intron 40.0%
TAGAAGCCATTCTCGCATAA+GGG + chr4.2:17094941-17094960 None:intergenic 40.0%
TCAGAGCTTGTCGAATTCAA+GGG - chr4.2:17096634-17096653 MS.gene028274:intron 40.0%
TCTGTTGAATCCTTGTGACA+TGG - chr4.2:17096943-17096962 MS.gene028274:intron 40.0%
TCTGTTTGTGCTCTTCTGTA+TGG - chr4.2:17095711-17095730 MS.gene028274:intron 40.0%
TGAGCTCATTGTCAAAAAGG+TGG + chr4.2:17098108-17098127 None:intergenic 40.0%
TGGAGCATAAAATTCAGTGG+AGG + chr4.2:17095236-17095255 None:intergenic 40.0%
TGGTAGTATAGTTGCAATGG+TGG - chr4.2:17099391-17099410 MS.gene028274:CDS 40.0%
TGTAGGTGTTTGTTCTTTGG+TGG - chr4.2:17094740-17094759 MS.gene028274:intron 40.0%
TTAGAAGCCATTCTCGCATA+AGG + chr4.2:17094942-17094961 None:intergenic 40.0%
TTCAACGGAATTAGAGCAAG+CGG + chr4.2:17094180-17094199 None:intergenic 40.0%
! AAAGCCTTATCTATCCGATG+TGG + chr4.2:17096735-17096754 None:intergenic 40.0%
! AAGCCTTATCTATCCGATGT+GGG + chr4.2:17096734-17096753 None:intergenic 40.0%
! AGAGTCTTATCTATCCGATG+TGG + chr4.2:17096528-17096547 None:intergenic 40.0%
! ATTTGGAATGTCTTGCCAAG+GGG - chr4.2:17095811-17095830 MS.gene028274:intron 40.0%
! CATGGATGATTGGTTGAAGT+GGG - chr4.2:17095560-17095579 MS.gene028274:intron 40.0%
! CCTGCCTACATTGATAGTAT+TGG - chr4.2:17096488-17096507 MS.gene028274:intron 40.0%
! GAGAAGAGTATAGAAAGAGG+AGG - chr4.2:17096549-17096568 MS.gene028274:intron 40.0%
! GAGTCTTATCTATCCGATGT+GGG + chr4.2:17096527-17096546 None:intergenic 40.0%
! GTAAATGAGAGTATGGTGAC+TGG - chr4.2:17096207-17096226 MS.gene028274:intron 40.0%
! GTATTTGGAATGTCTTGCCA+AGG - chr4.2:17095809-17095828 MS.gene028274:intron 40.0%
! GTCACTAGGTTGAATAAGCA+AGG + chr4.2:17096121-17096140 None:intergenic 40.0%
! TCATGGATGATTGGTTGAAG+TGG - chr4.2:17095559-17095578 MS.gene028274:intron 40.0%
! TGAGGAAGTATGTTCTGATC+AGG - chr4.2:17098594-17098613 MS.gene028274:intron 40.0%
! TTACATGAACCGGTTTCAAC+CGG - chr4.2:17094450-17094469 MS.gene028274:CDS 40.0%
! TTGTTCTTTGGTGGATGCAA+GGG - chr4.2:17094749-17094768 MS.gene028274:intron 40.0%
! TTTGTTCTTTGGTGGATGCA+AGG - chr4.2:17094748-17094767 MS.gene028274:intron 40.0%
!! ATGGATGTCCTTGTTGCTTT+GGG - chr4.2:17095666-17095685 MS.gene028274:intron 40.0%
!! CCTTAAAAAACCGGCTTGTA+AGG + chr4.2:17096790-17096809 None:intergenic 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG - chr4.2:17096591-17096610 MS.gene028274:intron 40.0%
!! GGAGTATTGATTGGAGTCTT+AGG - chr4.2:17098730-17098749 MS.gene028274:intron 40.0%
!! GTGGCTTTAGCTACTTCATT+AGG - chr4.2:17094597-17094616 MS.gene028274:intron 40.0%
!! TCTTTCTCCAAGCTTTGGAT+TGG + chr4.2:17096884-17096903 None:intergenic 40.0%
!! TGTAATATCGCTTTTGCCAG+CGG + chr4.2:17098266-17098285 None:intergenic 40.0%
!! TTGAAGAAAGTGCCAAGACT+GGG - chr4.2:17098689-17098708 MS.gene028274:intron 40.0%
!!! AGTCGGCATTTAGTTTTCCT+GGG - chr4.2:17097157-17097176 MS.gene028274:intron 40.0%
!!! CCTTACAAGCCGGTTTTTTA+AGG - chr4.2:17096787-17096806 MS.gene028274:intron 40.0%
!!! GAGATTGTTTTAGGGGTTGT+AGG - chr4.2:17094723-17094742 MS.gene028274:intron 40.0%
!!! GGGGTTTTATTTCCTTCACT+GGG - chr4.2:17099638-17099657 MS.gene028274:CDS 40.0%
!!! GTTGACGTCGTTTTTATCGT+AGG + chr4.2:17094108-17094127 None:intergenic 40.0%
AAAAACGACGTCAACGACGA+CGG - chr4.2:17094113-17094132 MS.gene028274:CDS 45.0%
AATGGGAATCACGCCTGTAA+TGG - chr4.2:17098807-17098826 MS.gene028274:CDS 45.0%
ACTCACACTAAGAAGCAAGC+TGG + chr4.2:17095006-17095025 None:intergenic 45.0%
ACTTCTCTGCTATTCCAGGA+AGG - chr4.2:17098387-17098406 MS.gene028274:intron 45.0%
AGATTCCCCTCTTCTTCATG+GGG - chr4.2:17095475-17095494 MS.gene028274:CDS 45.0%
AGGGACACATGTCTCATTAG+AGG - chr4.2:17098513-17098532 MS.gene028274:intron 45.0%
AGTCCCACATCGGATAGATA+AGG - chr4.2:17096521-17096540 MS.gene028274:intron 45.0%
ATACTCCATTGCACGCTACA+AGG + chr4.2:17098717-17098736 None:intergenic 45.0%
ATAGAGGGCCTCCAGAAAAT+GGG - chr4.2:17098790-17098809 MS.gene028274:intron 45.0%
ATCACGCCTGTAATGGTTAC+AGG - chr4.2:17098814-17098833 MS.gene028274:CDS 45.0%
ATCTATCCGATGTGGGACTT+GGG + chr4.2:17096520-17096539 None:intergenic 45.0%
ATTACCCCCATGAAGAAGAG+GGG + chr4.2:17095483-17095502 None:intergenic 45.0%
CAAAGCTTGGAGAAAGAGGA+GGG - chr4.2:17096887-17096906 MS.gene028274:intron 45.0%
CACCATCTGAGCTCTTTCTA+AGG + chr4.2:17097842-17097861 None:intergenic 45.0%
CAGATTCCCCTCTTCTTCAT+GGG - chr4.2:17095474-17095493 MS.gene028274:CDS 45.0%
CAGGTAACAATACCATCAGC+GGG + chr4.2:17096174-17096193 None:intergenic 45.0%
CATTCAAGATGTTAGGGCAG+AGG - chr4.2:17099322-17099341 MS.gene028274:CDS 45.0%
CATTGCTAGTCCATGTCACA+AGG + chr4.2:17096956-17096975 None:intergenic 45.0%
CCAGGTAACAATACCATCAG+CGG + chr4.2:17096175-17096194 None:intergenic 45.0%
CGAGTCTATACCTGTTTCGA+AGG - chr4.2:17096230-17096249 MS.gene028274:intron 45.0%
CGCTGATGGTATTGTTACCT+GGG - chr4.2:17096173-17096192 MS.gene028274:intron 45.0%
CTACCTGCAAGCCAAAAGAA+TGG + chr4.2:17097458-17097477 None:intergenic 45.0%
CTGTAGTTCCCAAAGCAACA+AGG + chr4.2:17095677-17095696 None:intergenic 45.0%
CTTCTCTGCTATTCCAGGAA+GGG - chr4.2:17098388-17098407 MS.gene028274:intron 45.0%
GAAAAACCCAAGTCCCACAT+CGG - chr4.2:17096511-17096530 MS.gene028274:intron 45.0%
GACTGTATCGGATCCTACTT+TGG + chr4.2:17096319-17096338 None:intergenic 45.0%
GATGAATGGCTGCCGAAAAA+TGG - chr4.2:17097670-17097689 MS.gene028274:CDS 45.0%
GCAGATGTTGGTATGGCAAT+TGG - chr4.2:17099449-17099468 MS.gene028274:intron 45.0%
GCTGATGGTATTGTTACCTG+GGG - chr4.2:17096174-17096193 MS.gene028274:intron 45.0%
GGTGTGCAGTGCATTATAGA+CGG - chr4.2:17098410-17098429 MS.gene028274:intron 45.0%
TAGAAGCCCTTATGCGAGAA+TGG - chr4.2:17094932-17094951 MS.gene028274:intron 45.0%
TATAGAGGGCCTCCAGAAAA+TGG - chr4.2:17098789-17098808 MS.gene028274:intron 45.0%
TATCTATCCGATGTGGGACT+TGG + chr4.2:17096521-17096540 None:intergenic 45.0%
TCAACGACGACGGAATTAAC+CGG - chr4.2:17094123-17094142 MS.gene028274:CDS 45.0%
TCAGACTTCTCTGCTATTCC+AGG - chr4.2:17098383-17098402 MS.gene028274:intron 45.0%
TCAGATTCCCCTCTTCTTCA+TGG - chr4.2:17095473-17095492 MS.gene028274:CDS 45.0%
TGGAATAGCAGAGAAGTCTG+AGG + chr4.2:17098384-17098403 None:intergenic 45.0%
TTAGTGGTATGAAAGGGGTG+AGG - chr4.2:17094787-17094806 MS.gene028274:intron 45.0%
TTCTCTGCTATTCCAGGAAG+GGG - chr4.2:17098389-17098408 MS.gene028274:intron 45.0%
TTGGAGCATACCCAGATGAA+TGG - chr4.2:17097656-17097675 MS.gene028274:CDS 45.0%
TTGGTATGGCAATTGGAGCT+GGG - chr4.2:17099456-17099475 MS.gene028274:intron 45.0%
! ATGGCGCTCTTACTGGATTT+TGG - chr4.2:17095730-17095749 MS.gene028274:intron 45.0%
! CACTCCTGCAACAGCTTTAT+TGG - chr4.2:17095869-17095888 MS.gene028274:CDS 45.0%
! CATGGATGTCCTTGTTGCTT+TGG - chr4.2:17095665-17095684 MS.gene028274:intron 45.0%
! GCATTGATCTCCTTCGAAAC+AGG + chr4.2:17096243-17096262 None:intergenic 45.0%
! GCGAGAATGGCTTCTAAAGA+TGG - chr4.2:17094945-17094964 MS.gene028274:intron 45.0%
! GTACTATCTCCAACCGGTTT+AGG + chr4.2:17094477-17094496 None:intergenic 45.0%
! TATAGACGGACAGCGTGTTT+TGG - chr4.2:17098424-17098443 MS.gene028274:intron 45.0%
! TGATTGGTTGAAGTGGGCAT+TGG - chr4.2:17095566-17095585 MS.gene028274:intron 45.0%
! TTTTCGGCAGCCATTCATCT+GGG + chr4.2:17097669-17097688 None:intergenic 45.0%
! TTTTCTAGATGGCAGACCTG+TGG - chr4.2:17096077-17096096 MS.gene028274:CDS 45.0%
!! AAAAACCGGCTTGTAAGGTG+AGG + chr4.2:17096785-17096804 None:intergenic 45.0%
!! AATGGGAGCTTTGGACATCT+GGG + chr4.2:17096373-17096392 None:intergenic 45.0%
!! ATAGTTGCAATGGTGGGTGA+CGG - chr4.2:17099398-17099417 MS.gene028274:CDS 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG + chr4.2:17096584-17096603 None:intergenic 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG - chr4.2:17096581-17096600 MS.gene028274:intron 45.0%
!! CTTGAAGAAAGTGCCAAGAC+TGG - chr4.2:17098688-17098707 MS.gene028274:intron 45.0%
!! GCGTGCAATGGAGTATTGAT+TGG - chr4.2:17098721-17098740 MS.gene028274:intron 45.0%
!! GGAGGTACCATCAATTTGCA+TGG - chr4.2:17096273-17096292 MS.gene028274:intron 45.0%
!! GTAATATCGCTTTTGCCAGC+GGG + chr4.2:17098265-17098284 None:intergenic 45.0%
!! GTTCTGATCAGGTTGGTAAC+AGG - chr4.2:17098605-17098624 MS.gene028274:intron 45.0%
!! TGGAAGTATTTCCCACTAGG+CGG + chr4.2:17096991-17097010 None:intergenic 45.0%
!! TTTGGTGGATGCAAGGGTTT+TGG - chr4.2:17094755-17094774 MS.gene028274:intron 45.0%
!! TTTTTCGGCAGCCATTCATC+TGG + chr4.2:17097670-17097689 None:intergenic 45.0%
!!! CACCACCGCTTTTTTTACTC+CGG + chr4.2:17094580-17094599 None:intergenic 45.0%
!!! CGGGGTTTTATTTCCTTCAC+TGG - chr4.2:17099637-17099656 MS.gene028274:CDS 45.0%
!!! GAGTCGGCATTTAGTTTTCC+TGG - chr4.2:17097156-17097175 MS.gene028274:intron 45.0%
!!! GGCATCATTTTGGGATCCAT+TGG + chr4.2:17098330-17098349 None:intergenic 45.0%
!!! GTACCATTCTTTTGGCTTGC+AGG - chr4.2:17097452-17097471 MS.gene028274:CDS 45.0%
!!! GTTTTGAAGTAAAGCGACGG+AGG + chr4.2:17094237-17094256 None:intergenic 45.0%
!!! AATATATTTTATTTAAATTC+AGG - chr4.2:17098226-17098245 MS.gene028274:CDS 5.0%
AAGGAGCTCCAACGATCAGA+GGG + chr4.2:17097248-17097267 None:intergenic 50.0%
AATAAAACCCCGGCAGCAAC+TGG + chr4.2:17099629-17099648 None:intergenic 50.0%
ACATCTGCAGCAGCTAATGC+AGG + chr4.2:17099437-17099456 None:intergenic 50.0%
ACCACCGTACTATCTCCAAC+CGG + chr4.2:17094483-17094502 None:intergenic 50.0%
AGACATGAGAGCGGCTTCAA+CGG + chr4.2:17094195-17094214 None:intergenic 50.0%
AGAGGTTATGCCTGCAGGAA+AGG - chr4.2:17099340-17099359 MS.gene028274:CDS 50.0%
AGCTGCTGCAGATGTTGGTA+TGG - chr4.2:17099442-17099461 MS.gene028274:intron 50.0%
ATGCCCATGTGCACTTGGTT+TGG - chr4.2:17097744-17097763 MS.gene028274:intron 50.0%
ATTGCATGCCCATGTGCACT+TGG - chr4.2:17097739-17097758 MS.gene028274:intron 50.0%
CACCGGAGTAAAAAAAGCGG+TGG - chr4.2:17094575-17094594 MS.gene028274:intron 50.0%
CCAAAGCTTGGAGAAAGAGG+AGG - chr4.2:17096886-17096905 MS.gene028274:intron 50.0%
CCGCTGATGGTATTGTTACC+TGG - chr4.2:17096172-17096191 MS.gene028274:intron 50.0%
CCTCCTCTTTCTCCAAGCTT+TGG + chr4.2:17096889-17096908 None:intergenic 50.0%
CGACGGAATTAACCGGATTC+AGG - chr4.2:17094130-17094149 MS.gene028274:CDS 50.0%
CGGAGTAAAAAAAGCGGTGG+TGG - chr4.2:17094578-17094597 MS.gene028274:intron 50.0%
CGGATTCAGGTCAGAATCAC+CGG - chr4.2:17094143-17094162 MS.gene028274:CDS 50.0%
CGGTGATTCTGACCTGAATC+CGG + chr4.2:17094145-17094164 None:intergenic 50.0%
CTTCTGTATGGCGCTCTTAC+TGG - chr4.2:17095723-17095742 MS.gene028274:intron 50.0%
GATTCCCCTCTTCTTCATGG+GGG - chr4.2:17095476-17095495 MS.gene028274:CDS 50.0%
GCAATCCTCACCTTACAAGC+CGG - chr4.2:17096571-17096590 MS.gene028274:intron 50.0%
GCATTAGCTGCTGCAGATGT+TGG - chr4.2:17099437-17099456 MS.gene028274:intron 50.0%
GCGTGTGTGAATTCCGTTGA+AGG - chr4.2:17094537-17094556 MS.gene028274:intron 50.0%
GCTGAGGTAACTCCCAATGA+TGG - chr4.2:17097976-17097995 MS.gene028274:CDS 50.0%
GGAAGCTTGATTCCCAGTGA+AGG + chr4.2:17099653-17099672 None:intergenic 50.0%
GGCCTTTCCTCATGGATGAT+TGG - chr4.2:17095550-17095569 MS.gene028274:CDS 50.0%
GGGAATCAAGCTTCCACCAT+GGG - chr4.2:17099658-17099677 MS.gene028274:CDS 50.0%
GGTACAAAGATTCCCGCTGA+TGG - chr4.2:17096159-17096178 MS.gene028274:CDS 50.0%
GGTTTAGGTCCGGTTGAAAC+CGG + chr4.2:17094462-17094481 None:intergenic 50.0%
GGTTTCAACCGGACCTAAAC+CGG - chr4.2:17094461-17094480 MS.gene028274:CDS 50.0%
GTCCATTCCTGCAAACACCT+TGG + chr4.2:17097926-17097945 None:intergenic 50.0%
GTGGTTGGACAGTTCACGAT+CGG - chr4.2:17094498-17094517 MS.gene028274:intron 50.0%
GTTGGAGATAGTACGGTGGT+TGG - chr4.2:17094483-17094502 MS.gene028274:CDS 50.0%
GTTGGTATGGCAATTGGAGC+TGG - chr4.2:17099455-17099474 MS.gene028274:intron 50.0%
TAAACTGGTGGCTTCTGCTG+AGG - chr4.2:17097960-17097979 MS.gene028274:CDS 50.0%
TAAGGAGCTCCAACGATCAG+AGG + chr4.2:17097249-17097268 None:intergenic 50.0%
TCAGCGGGAATCTTTGTACC+AGG + chr4.2:17096159-17096178 None:intergenic 50.0%
TCATGGTGGCAACAGGTGTT+GGG - chr4.2:17097782-17097801 MS.gene028274:intron 50.0%
TCGCCAAACCAAGTGCACAT+GGG + chr4.2:17097750-17097769 None:intergenic 50.0%
TGAAAGGGGTGAGGCAGTTT+CGG - chr4.2:17094796-17094815 MS.gene028274:intron 50.0%
TGGGAATCAAGCTTCCACCA+TGG - chr4.2:17099657-17099676 MS.gene028274:CDS 50.0%
! AAGTATTGTGGCCGTGCTCT+TGG - chr4.2:17096413-17096432 MS.gene028274:intron 50.0%
! ATCTCCAACCGGTTTAGGTC+CGG + chr4.2:17094472-17094491 None:intergenic 50.0%
! ATTTTCCAGAACAGCAGCCC+AGG + chr4.2:17097177-17097196 None:intergenic 50.0%
! CAGGCGTGATTCCCATTTTC+TGG + chr4.2:17098804-17098823 None:intergenic 50.0%
! CTTGGTGCGTGAATGGGTTT+AGG + chr4.2:17096663-17096682 None:intergenic 50.0%
! GAAGTATTTCCCACTAGGCG+GGG + chr4.2:17096989-17097008 None:intergenic 50.0%
! GCGTGATTCCCATTTTCTGG+AGG + chr4.2:17098801-17098820 None:intergenic 50.0%
! TCTGTTGCCAAGGTGTTTGC+AGG - chr4.2:17097916-17097935 MS.gene028274:CDS 50.0%
! TGCCAAGGTGTTTGCAGGAA+TGG - chr4.2:17097921-17097940 MS.gene028274:CDS 50.0%
!! ACAGGTGTTGGGGCTAACAA+TGG - chr4.2:17097793-17097812 MS.gene028274:intron 50.0%
!! CAAAACCGGCTTGTAAGGTG+AGG + chr4.2:17096579-17096598 None:intergenic 50.0%
!! GAATGGGAGCTTTGGACATC+TGG + chr4.2:17096374-17096393 None:intergenic 50.0%
!! GGAAGTATTTCCCACTAGGC+GGG + chr4.2:17096990-17097009 None:intergenic 50.0%
!! TTTGGGCTTGGTGCGTGAAT+GGG + chr4.2:17096669-17096688 None:intergenic 50.0%
AACTGCTCGAGCTGTTGCCA+AGG - chr4.2:17098849-17098868 MS.gene028274:CDS 55.0%
ACCACATCAGCCTTTCCTGC+AGG + chr4.2:17099353-17099372 None:intergenic 55.0%
ACCGGTTGGAGATAGTACGG+TGG - chr4.2:17094479-17094498 MS.gene028274:CDS 55.0%
ACCGTCGACAGACATGAGAG+CGG + chr4.2:17094204-17094223 None:intergenic 55.0%
ACTGCTGTCATGGTGGCAAC+AGG - chr4.2:17097775-17097794 MS.gene028274:intron 55.0%
AGCCACTGTCTCTGTTGCCA+AGG - chr4.2:17097906-17097925 MS.gene028274:intron 55.0%
AGGAAGCTGCTGGTGGAAAG+TGG - chr4.2:17098625-17098644 MS.gene028274:intron 55.0%
AGGAGCTCCAACGATCAGAG+GGG + chr4.2:17097247-17097266 None:intergenic 55.0%
AGGTATACTGCTGGGGCTCT+TGG - chr4.2:17097637-17097656 MS.gene028274:CDS 55.0%
ATGCATGCACCAGCAACCCA+TGG + chr4.2:17099677-17099696 None:intergenic 55.0%
ATTGCCGTACCAGTTGCTGC+CGG - chr4.2:17099617-17099636 MS.gene028274:CDS 55.0%
ATTGTGGCCGTGCTCTTGGA+TGG - chr4.2:17096417-17096436 MS.gene028274:intron 55.0%
CACCTTGGCAACAGAGACAG+TGG + chr4.2:17097911-17097930 None:intergenic 55.0%
CGCTACAAGGATCCCAGTCT+TGG + chr4.2:17098704-17098723 None:intergenic 55.0%
CTCCAACGATCAGAGGGGTA+AGG + chr4.2:17097242-17097261 None:intergenic 55.0%
GACACCAACTGCTGTCATGG+TGG - chr4.2:17097768-17097787 MS.gene028274:intron 55.0%
GAGATGTGGGCCTTTCCTCA+TGG - chr4.2:17095542-17095561 MS.gene028274:CDS 55.0%
GATAGTGTTCCCCGCCTAGT+GGG - chr4.2:17096977-17096996 MS.gene028274:intron 55.0%
GATCGGCGGTATGACATGTG+CGG - chr4.2:17094515-17094534 MS.gene028274:intron 55.0%
GCGAACATCTTCGAGATCGC+CGG + chr4.2:17094075-17094094 None:intergenic 55.0%
GGCATCAGATGTCTTCCCCT+TGG + chr4.2:17095829-17095848 None:intergenic 55.0%
GGGATCCTTGTAGCGTGCAA+TGG - chr4.2:17098709-17098728 MS.gene028274:intron 55.0%
GTCATGGTGGCAACAGGTGT+TGG - chr4.2:17097781-17097800 MS.gene028274:intron 55.0%
GTCGCCAAACCAAGTGCACA+TGG + chr4.2:17097751-17097770 None:intergenic 55.0%
GTGTTTGCAGGAATGGACCG+TGG - chr4.2:17097928-17097947 MS.gene028274:CDS 55.0%
GTTGCCACCATGACAGCAGT+TGG + chr4.2:17097775-17097794 None:intergenic 55.0%
GTTGGACAGTTCACGATCGG+CGG - chr4.2:17094501-17094520 MS.gene028274:intron 55.0%
TCAACCGGACCTAAACCGGT+TGG - chr4.2:17094465-17094484 MS.gene028274:CDS 55.0%
TGCCTTACCCCTCTGATCGT+TGG - chr4.2:17097237-17097256 MS.gene028274:intron 55.0%
TGGTAACAGGAAGCTGCTGG+TGG - chr4.2:17098618-17098637 MS.gene028274:intron 55.0%
! AAGCTTCCACCATGGGTTGC+TGG - chr4.2:17099665-17099684 MS.gene028274:CDS 55.0%
! ATGGGTTGCTGGTGCATGCA+TGG - chr4.2:17099676-17099695 MS.gene028274:CDS 55.0%
! CATGGTGGCAACAGGTGTTG+GGG - chr4.2:17097783-17097802 MS.gene028274:intron 55.0%
! GGTGCGTGAATGGGTTTAGG+CGG + chr4.2:17096660-17096679 None:intergenic 55.0%
! GTTTTCCTGGGCTGCTGTTC+TGG - chr4.2:17097169-17097188 MS.gene028274:intron 55.0%
! TGATAGTGTTCCCCGCCTAG+TGG - chr4.2:17096976-17096995 MS.gene028274:intron 55.0%
!! CACCAAGCCCAAAGAGTGCT+GGG - chr4.2:17096676-17096695 MS.gene028274:intron 55.0%
!! CTTTGGGCTTGGTGCGTGAA+TGG + chr4.2:17096670-17096689 None:intergenic 55.0%
!! GGTTGGTAACAGGAAGCTGC+TGG - chr4.2:17098615-17098634 MS.gene028274:intron 55.0%
AACCCCGGCAGCAACTGGTA+CGG + chr4.2:17099624-17099643 None:intergenic 60.0%
AGGGCAGAGGTTATGCCTGC+AGG - chr4.2:17099335-17099354 MS.gene028274:CDS 60.0%
ATGCACTGCACACCCCTTCC+TGG + chr4.2:17098404-17098423 None:intergenic 60.0%
CAACTAACTTCCACCGGCGC+CGG - chr4.2:17094041-17094060 MS.gene028274:CDS 60.0%
CATGCACCAGCAACCCATGG+TGG + chr4.2:17099674-17099693 None:intergenic 60.0%
CCTCACGCCCAGCACTCTTT+GGG + chr4.2:17096686-17096705 None:intergenic 60.0%
GCCGCTCTCATGTCTGTCGA+CGG - chr4.2:17094200-17094219 MS.gene028274:CDS 60.0%
GCCTGCAGGAAAGGCTGATG+TGG - chr4.2:17099349-17099368 MS.gene028274:CDS 60.0%
GGCGACACCAACTGCTGTCA+TGG - chr4.2:17097765-17097784 MS.gene028274:intron 60.0%
TGCTCGAGCTGTTGCCAAGG+AGG - chr4.2:17098852-17098871 MS.gene028274:CDS 60.0%
TTGCCGTACCAGTTGCTGCC+GGG - chr4.2:17099618-17099637 MS.gene028274:CDS 60.0%
! GCACCAAGCCCAAAGAGTGC+TGG - chr4.2:17096675-17096694 MS.gene028274:intron 60.0%
!! AAAGAGTGCTGGGCGTGAGG+GGG - chr4.2:17096686-17096705 MS.gene028274:intron 60.0%
!! CAAAGAGTGCTGGGCGTGAG+GGG - chr4.2:17096685-17096704 MS.gene028274:intron 60.0%
!! CCAAAGAGTGCTGGGCGTGA+GGG - chr4.2:17096684-17096703 MS.gene028274:intron 60.0%
CCCTCACGCCCAGCACTCTT+TGG + chr4.2:17096687-17096706 None:intergenic 65.0%
CGCCCAGCACTCTTTGGGCT+TGG + chr4.2:17096681-17096700 None:intergenic 65.0%
GAGATCGCCGGAGTCATCGC+CGG + chr4.2:17094063-17094082 None:intergenic 65.0%
GCAAGCGGCGCATGTCATGC+CGG + chr4.2:17094165-17094184 None:intergenic 65.0%
GGCTAGCAGTGAACACCCGC+TGG - chr4.2:17098247-17098266 MS.gene028274:CDS 65.0%
TGCCGTACCAGTTGCTGCCG+GGG - chr4.2:17099619-17099638 MS.gene028274:CDS 65.0%
! GGGCGTGAGGGGGGTGTATT+GGG - chr4.2:17096696-17096715 MS.gene028274:intron 65.0%
! TGGGCGTGAGGGGGGTGTAT+TGG - chr4.2:17096695-17096714 MS.gene028274:intron 65.0%
!! AAGAGTGCTGGGCGTGAGGG+GGG - chr4.2:17096687-17096706 MS.gene028274:intron 65.0%
!! CCCAAAGAGTGCTGGGCGTG+AGG - chr4.2:17096683-17096702 MS.gene028274:intron 65.0%
!! ACCGGCGCCGGCGATGACTC+CGG - chr4.2:17094053-17094072 MS.gene028274:CDS 75.0%
! GCCGGAGTCATCGCCGGCGC+CGG + chr4.2:17094057-17094076 None:intergenic 80.0%
!! GGAGTCATCGCCGGCGCCGG+TGG + chr4.2:17094054-17094073 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 17094026 17099793 17094026 ID=MS.gene028274
chr4.2 mRNA 17094026 17099793 17094026 ID=MS.gene028274.t1;Parent=MS.gene028274
chr4.2 exon 17099527 17099793 17099527 ID=MS.gene028274.t1.exon1;Parent=MS.gene028274.t1
chr4.2 CDS 17099527 17099793 17099527 ID=cds.MS.gene028274.t1;Parent=MS.gene028274.t1
chr4.2 exon 17098800 17099420 17098800 ID=MS.gene028274.t1.exon2;Parent=MS.gene028274.t1
chr4.2 CDS 17098800 17099420 17098800 ID=cds.MS.gene028274.t1;Parent=MS.gene028274.t1
chr4.2 exon 17097913 17098342 17097913 ID=MS.gene028274.t1.exon3;Parent=MS.gene028274.t1
chr4.2 CDS 17097913 17098342 17097913 ID=cds.MS.gene028274.t1;Parent=MS.gene028274.t1
chr4.2 exon 17097409 17097734 17097409 ID=MS.gene028274.t1.exon4;Parent=MS.gene028274.t1
chr4.2 CDS 17097409 17097734 17097409 ID=cds.MS.gene028274.t1;Parent=MS.gene028274.t1
chr4.2 exon 17096287 17096345 17096287 ID=MS.gene028274.t1.exon5;Parent=MS.gene028274.t1
chr4.2 CDS 17096287 17096345 17096287 ID=cds.MS.gene028274.t1;Parent=MS.gene028274.t1
chr4.2 exon 17095838 17096180 17095838 ID=MS.gene028274.t1.exon6;Parent=MS.gene028274.t1
chr4.2 CDS 17095838 17096180 17095838 ID=cds.MS.gene028274.t1;Parent=MS.gene028274.t1
chr4.2 exon 17095374 17095571 17095374 ID=MS.gene028274.t1.exon7;Parent=MS.gene028274.t1
chr4.2 CDS 17095374 17095571 17095374 ID=cds.MS.gene028274.t1;Parent=MS.gene028274.t1
chr4.2 exon 17094946 17095203 17094946 ID=MS.gene028274.t1.exon8;Parent=MS.gene028274.t1
chr4.2 CDS 17094946 17095203 17094946 ID=cds.MS.gene028274.t1;Parent=MS.gene028274.t1
chr4.2 exon 17094026 17094502 17094026 ID=MS.gene028274.t1.exon9;Parent=MS.gene028274.t1
chr4.2 CDS 17094026 17094502 17094026 ID=cds.MS.gene028274.t1;Parent=MS.gene028274.t1
Gene Sequence

>MS.gene028274

ATGGCGCCGAGTATTCAACTAACTTCCACCGGCGCCGGCGATGACTCCGGCGATCTCGAAGATGTTCGCCTACTAGATTCCTACGATAAAAACGACGTCAACGACGACGGAATTAACCGGATTCAGGTCAGAATCACCGGCATGACATGCGCCGCTTGCTCTAATTCCGTTGAAGCCGCTCTCATGTCTGTCGACGGTGTAATTCAAGCCTCCGTCGCTTTACTTCAAAACAAAGCCGACGTTGTTTTCAATAGAAACCTCGTCAAGGTTTAACTCTAATTTTCACTTTTTTTTATTTTTTTTATTTTTTGAAATTGTGAAAGTGTTTGTTTAGTTACTGATTTTGGAAATTATTGAAATGTTTAAACCCTAGGATGAAGATATTAAGAATGCAATTGAAGATGCAGGTTTTGAAGCTGAGATCTTACATGAACCGGTTTCAACCGGACCTAAACCGGTTGGAGATAGTACGGTGGTTGGACAGTTCACGATCGGCGGTATGACATGTGCGGCGTGTGTGAATTCCGTTGAAGGAATTTTAAATGACATCACCGGAGTAAAAAAAGCGGTGGTGGCTTTAGCTACTTCATTAGGTGAAGTTGAGTATGATCCAAACGTGATAAGCAAAGAAGATATTGTTATTGCAATTGAAGATGCAGGTTTTGAAGCTTCTTTTGTTCAGAGTACTAGTCAAGATGAGATTGTTTTAGGGGTTGTAGGTGTTTGTTCTTTGGTGGATGCAAGGGTTTTGGAAAGTATGCTTAGTGGTATGAAAGGGGTGAGGCAGTTTCGGTTTGATCCTTTGTTGAGTGAGCTTAATGTTGTTTTTGATCCTCAAGTTCTTAGTTCTAGATCGTTGGTTGATGAGATTCGCGTAGTTATTAATGACAAATATACTTTGCATGTTAGAAGCCCTTATGCGAGAATGGCTTCTAAAGATGGTTCAGAGAGTTCGTCTATGTTTCGGCTTTTTATTACCAGCTTGCTTCTTAGTGTGAGTATCCCTTTAATCTATAGCCATATTTGTTCTTGTTATTTTGGTTTCATTGTGCTTTATTTGTTTGATCGCATTATTTTGCTTCTTATTGTAGATGTAGAGAGATAGTGAGTAGAGTTAAGAAATCATGTAGTTAGTAACTGCTTTAAACTCAAACCTTAGGGTGTTAGTGTAGAATGAGCCATCCTTTCTGATTCTGCTGATGTAAGACCTCCACTGAATTTTATGCTCCATAAGGGTTGCATTAGTTCATACTCCATACAGAAATTTCATCTAACGGAAGTAGTACCGCGTCATCGTTTTTTTTATAGAAACATGTAACTGAAGCTAAACAAGACTCTTCATTTTTAGAATTTGAGTGCATGTCGTATGTTATTGTCCCTTATTTTGTTTAGTTTCTTGTTTATTCTTTCCATGCTTTTGCATTAATTTGTGTTTGTTGCATTTGTCTCAGATTCCCCTCTTCTTCATGGGGGTAATTTGTCCTCATATCCCATTCATATACTCGTTATTACTTTGGAGATGTGGGCCTTTCCTCATGGATGATTGGTTGAAGTGGGCATTGGTGAGTGTCATTCAATTTGGGATTGGAAAGCGCTTCTACATAGCAGCTTTCAGAGCTCTTAGAAATGGTTCAACAAACATGGATGTCCTTGTTGCTTTGGGAACTACAGCTTCATATGTTTATTCTGTTTGTGCTCTTCTGTATGGCGCTCTTACTGGATTTTGGTCTACAACATACTTTGAAACAAGTGCTATGCTTATAACATTTGTATTGTTGGGAAAGTATTTGGAATGTCTTGCCAAGGGGAAGACATCTGATGCCATTAAGAAGCTAGTAGAACTCACTCCTGCAACAGCTTTATTGGTTGTTAAAGACAAAGGTGCTTGTCACTTTGATTTTATGTGCTTTGTTTTCTTAAGAAAATGGAGGGGAAACAGCTTATGTCCTGATTGTCTTATATTTAGGTTGAAATTAGTGATGGTTATTTAATTTATCATCTTGATTTCATCATAACATCAAATTATAACTTGCCAATATTTTTTCCTTTTCTTTTCTAGATGGCAGACCTGTGGAAGAAAGAGAAATAGATTCCTTGCTTATTCAACCTAGTGACACATTAAAAGTTCTGCCTGGTACAAAGATTCCCGCTGATGGTATTGTTACCTGGGGCTCAAGTTATGTAAATGAGAGTATGGTGACTGGCGAGTCTATACCTGTTTCGAAGGAGATCAATGCATCTGTCATTGGAGGTACCATCAATTTGCATGGTGTCCTTCACATTAAAGCTACCAAAGTAGGATCCGATACAGTCTTGAGTCAGATAATTAATTTGGTCGAGACGGCCCAGATGTCCAAAGCTCCCATTCAAAAGTTTGCTGATTATGTAAGTATTGTGGCCGTGCTCTTGGATGGTTTTTATGTTCTGTTATTGTTAAATGATAGTGTAAGCATTTTTTGTGCCCTGCCTACATTGATAGTATTGGGAAAAACCCAAGTCCCACATCGGATAGATAAGACTCTTGAGAAGAGTATAGAAAGAGGAGGCAATCCTCACCTTACAAGCCGGTTTTGTAAGGATGAGTTAGGCCCCAAATTTTAACACGGTATCAGAGCTTGTCGAATTCAAGGGCCGCCTAAACCCATTCACGCACCAAGCCCAAAGAGTGCTGGGCGTGAGGGGGGTGTATTGGGAAAAACCCAAGTCCCACATCGGATAGATAAGGCTTTTGAGAGAGTATATAAAGAGGAGGCAATCCTCACCTTACAAGCCGGTTTTTTAAGGATGAGTTAGGCCCCAAATTTCAATAGATAGTGTAAGCATTTTTTGTGCACTGCCTACATTGCATAATATAGCCAATCCAAAGCTTGGAGAAAGAGGAGGGTTGTGATTAAGAAGTCTGCACCTAATATAAAACTCTGTTGAATCCTTGTGACATGGACTAGCAATGTGATAGTGTTCCCCGCCTAGTGGGAAATACTTCCATTTTTAGTTATTGCTGGTGTACCATGTATGCATTTTTACTTAGTTTGGATTCCATTCTTTGTGGTAAAGAAAGTTTTAGCTTGTGAATCAGTTTTGAAACTAGTGAAATGTTTTCTTGTAACTAAAAGACACAATGAGTTGCAAAGAGTCGGCATTTAGTTTTCCTGGGCTGCTGTTCTGGAAAATGAAATCTGAGTAGTCCCGTAGAGTCAGAACAATATTTTGATGCCTTACCCCTCTGATCGTTGGAGCTCCTTACATAGAATTATTCATAAATTTTAATTTTTATTGATTCCAATTATTTCAGGTTTAGGCTTCAGCCATAATTCAAACTCATGTTTATTTGCTTGCACATAATATTCTAATAGTAGTCAGTATATTAACTTTATAAGCTTGCTAGTTGATTGCCACAAATGACTTAAGATACATTAACTAACTCAGGTACCATTCTTTTGGCTTGCAGGTAGCAAGCATATTTGTTCCTACAATTGTAGCTCTGTCATTATTGACACTATTGTGTTGGTAAGGTTTTTTTGACTAGTTTTTGCATATTGATAAAATTTGATTTCTAATGCGTGATTGAAATGCTTATCCTTACTTCTGTGTACATATTTTGTTTAAATTTTAGGTATACTGCTGGGGCTCTTGGAGCATACCCAGATGAATGGCTGCCGAAAAATGGAAACCACTTTGTTTTTGCCCTTATGTTTTCTATATCTGTTGTGGTGATTGCATGCCCATGTGCACTTGGTTTGGCGACACCAACTGCTGTCATGGTGGCAACAGGTGTTGGGGCTAACAATGGTGTGTTAATTAAAGGAGGAGAATCCTTAGAAAGAGCTCAGATGGTGAAGTACGTTATATTTGATAAGACAGGAACTCTAACTCAGGGTAAAGCCACTGTCTCTGTTGCCAAGGTGTTTGCAGGAATGGACCGTGGAGAATTTCTTAAACTGGTGGCTTCTGCTGAGGTAACTCCCAATGATGGTTACTCTCTGCTTCTCATTGTTTGTCTTTTGTATTGTCGCATACGCACAGTTTGAATCTAAATCCAGCTATAAAAGACATAAAACAATTTTTTTCTAAATTTCCTTCCACCTTTTTGACAATGAGCTCAACTTTCCTAATAATGTTTTGGCATTTTATTTTATTTTTACCTTGCATTTCTATGATGCCTATTAGAGGAATCAACAGTATTTTTGTCAATTATTTTTTAATATATTTTATTTAAATTCAGGCTAGCAGTGAACACCCGCTGGCAAAAGCGATATTACAATATGCACGCCATTTTCACTTCTTTGATGAGTCCTCTCTTACCAATGGATCCCAAAATGATGCCAATGAATTAAAATCAGGGTGGCTTTATGATGCCTCAGACTTCTCTGCTATTCCAGGAAGGGGTGTGCAGTGCATTATAGACGGACAGCGTGTTTTGGTAATTTTTTTTTGGCTATTCTTGTATGATTGTTATTATCTTTAATGAAGGAATATGTTTTGTGGAGAGGGACACATGTCTCATTAGAGGAAGACTTTTCTTAAGAGTTGATAAAGGTGTTTTTTATTTGTCCAAACGATTGCTTATTTGAGGAAGTATGTTCTGATCAGGTTGGTAACAGGAAGCTGCTGGTGGAAAGTGGCATAAGTATTTCTACTGAAGTGGAAAACTTTGTTGTAGAGCTTGAAGAAAGTGCCAAGACTGGGATCCTTGTAGCGTGCAATGGAGTATTGATTGGAGTCTTAGGGGTTGCAGACTCACTTAAGCGAGAAGCTTCTGTTGTTATAGAGGGCCTCCAGAAAATGGGAATCACGCCTGTAATGGTTACAGGAGATAACTGGAGAACTGCTCGAGCTGTTGCCAAGGAGGTTTGTATATATTTCTATAATATTTTCTTTTTGGTTGGAAGTAGCTCGTGATAATTTTGAGTGCAGTTTCAAGGCTCTTTTACTAGTACCTAGAAAACCAACATCTTTTGCATGGAACATGGTATTGTTATAGTGTGTAATATGAAAAACAAAATTGAGCCGTGGATAGGGATAGTTTTATACTATGAATGAAAGAAAAGTATGATTAAAACCATAACTGGTCTCGTTTTCAAGCTGCCTGTTGATTTTCTTGTGCATAAAAGGCAATAGCAATGTTTGAAGTCAATGCTAAGATTTTAAATTTATTACTACAAATATTTTAATCTTCTCTCTGTTATAAATCATATTGAATATCTGAGAATTCTTCATGACAGTTATAACAAATTTTGGGCAGATATTGATGTTATGGTCAAACTTGGCTAAGAAAATGTGTTTTTTGACAGGTTGGCATTCAAGATGTTAGGGCAGAGGTTATGCCTGCAGGAAAGGCTGATGTGGTTCGTTCATTCCAAAAAGATGGTAGTATAGTTGCAATGGTGGGTGACGGTATAAATGATTCTCCTGCATTAGCTGCTGCAGATGTTGGTATGGCAATTGGAGCTGGGACAGATATTGCAATAGAAGCTGCTAATTATGTGTTGATGAGAGATAATTTGGAAGATGTAATCACAGCTATTGATCTTTCTAAGAAGACATTTTCTCGTATTCGATTGAATTATGTATTTGCCATGGCCTACAATATTATTGCCGTACCAGTTGCTGCCGGGGTTTTATTTCCTTCACTGGGAATCAAGCTTCCACCATGGGTTGCTGGTGCATGCATGGCTCTCTCATCTGTTAGTGTTGTATGTTCTTCTTTGCTTCTTAGAAGATATAGAAAACCAAGACTTACTACAATACTTGAAATAATTGTAAATTAA
Protein sequence

>MS.gene028274.t1

MAPSIQLTSTGAGDDSGDLEDVRLLDSYDKNDVNDDGINRIQVRITGMTCAACSNSVEAALMSVDGVIQASVALLQNKADVVFNRNLVKDEDIKNAIEDAGFEAEILHEPVSTGPKPVGDSTVVGQFTIGGMTCAACVNSVEGILNDITGVKKAVVALATSLGEVEYDPNVISKEDIVIAIEDAGFEASFVQSTSQDEIVLGVVGVCSLVDARVLESMLSGMKGVRQFRFDPLLSELNVVFDPQVLSSRSLVDEIRVVINDKYTLHVRSPYARMASKDGSESSSMFRLFITSLLLSIPLFFMGVICPHIPFIYSLLLWRCGPFLMDDWLKWALVSVIQFGIGKRFYIAAFRALRNGSTNMDVLVALGTTASYVYSVCALLYGALTGFWSTTYFETSAMLITFVLLGKYLECLAKGKTSDAIKKLVELTPATALLVVKDKDGRPVEEREIDSLLIQPSDTLKVLPGTKIPADGIVTWGSSYVNESMVTGESIPVSKEINASVIGGTINLHGVLHIKATKVGSDTVLSQIINLVETAQMSKAPIQKFADYVASIFVPTIVALSLLTLLCWYTAGALGAYPDEWLPKNGNHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGESLERAQMVKYVIFDKTGTLTQGKATVSVAKVFAGMDRGEFLKLVASAEASSEHPLAKAILQYARHFHFFDESSLTNGSQNDANELKSGWLYDASDFSAIPGRGVQCIIDGQRVLVGNRKLLVESGISISTEVENFVVELEESAKTGILVACNGVLIGVLGVADSLKREASVVIEGLQKMGITPVMVTGDNWRTARAVAKEVGIQDVRAEVMPAGKADVVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIAIEAANYVLMRDNLEDVITAIDLSKKTFSRIRLNYVFAMAYNIIAVPVAAGVLFPSLGIKLPPWVAGACMALSSVSVVCSSLLLRRYRKPRLTTILEIIVN