Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02885.t1 | XP_003594335.1 | 94.7 | 584 | 20 | 1 | 1 | 584 | 1 | 573 | 0.00E+00 | 1095.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02885.t1 | Q9FIK1 | 55.5 | 569 | 217 | 6 | 1 | 552 | 1 | 550 | 5.4e-176 | 619.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02885.t1 | G7IQ44 | 94.7 | 584 | 20 | 1 | 1 | 584 | 1 | 573 | 0.0e+00 | 1095.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene02885 | MS.gene027737 | PPI |
| MS.gene02885 | MS.gene44279 | PPI |
| MS.gene02885 | MS.gene86230 | PPI |
| MS.gene02885 | MS.gene29159 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02885.t1 | MTR_2g027410 | 94.692 | 584 | 20 | 1 | 1 | 584 | 1 | 573 | 0.0 | 1140 |
| MS.gene02885.t1 | MTR_2g027410 | 93.945 | 512 | 20 | 1 | 73 | 584 | 1 | 501 | 0.0 | 972 |
| MS.gene02885.t1 | MTR_4g134210 | 67.987 | 606 | 164 | 7 | 1 | 582 | 1 | 600 | 0.0 | 835 |
| MS.gene02885.t1 | MTR_5g032780 | 44.796 | 538 | 242 | 8 | 1 | 483 | 1 | 538 | 1.71e-146 | 437 |
| MS.gene02885.t1 | MTR_8g069330 | 45.842 | 493 | 230 | 7 | 1 | 465 | 1 | 484 | 2.82e-135 | 407 |
| MS.gene02885.t1 | MTR_1g014070 | 38.540 | 493 | 266 | 7 | 1 | 463 | 1 | 486 | 1.31e-118 | 365 |
| MS.gene02885.t1 | MTR_5g015790 | 40.283 | 494 | 251 | 9 | 1 | 463 | 1 | 481 | 1.66e-116 | 360 |
| MS.gene02885.t1 | MTR_1g106430 | 36.417 | 508 | 276 | 7 | 1 | 473 | 1 | 496 | 4.19e-112 | 348 |
| MS.gene02885.t1 | MTR_4g093850 | 36.398 | 533 | 275 | 7 | 5 | 476 | 23 | 552 | 1.08e-105 | 333 |
| MS.gene02885.t1 | MTR_2g009340 | 35.185 | 540 | 279 | 7 | 5 | 476 | 23 | 559 | 2.42e-101 | 322 |
| MS.gene02885.t1 | MTR_2g018750 | 34.331 | 501 | 286 | 8 | 1 | 463 | 1 | 496 | 1.02e-88 | 286 |
| MS.gene02885.t1 | MTR_5g016060 | 34.783 | 460 | 276 | 7 | 25 | 465 | 39 | 493 | 2.29e-87 | 283 |
| MS.gene02885.t1 | MTR_4g093850 | 35.430 | 477 | 244 | 7 | 5 | 420 | 23 | 496 | 1.63e-86 | 278 |
| MS.gene02885.t1 | MTR_4g095430 | 34.716 | 458 | 278 | 9 | 25 | 465 | 12 | 465 | 1.52e-81 | 267 |
| MS.gene02885.t1 | MTR_8g090220 | 33.198 | 494 | 267 | 12 | 8 | 460 | 35 | 506 | 4.78e-81 | 264 |
| MS.gene02885.t1 | MTR_8g090220 | 33.469 | 493 | 265 | 12 | 8 | 459 | 35 | 505 | 3.56e-80 | 265 |
| MS.gene02885.t1 | MTR_1g094850 | 33.066 | 499 | 295 | 9 | 1 | 465 | 1 | 494 | 3.11e-78 | 259 |
| MS.gene02885.t1 | MTR_1g064360 | 30.957 | 491 | 297 | 9 | 1 | 463 | 1 | 477 | 8.86e-76 | 251 |
| MS.gene02885.t1 | MTR_2g084595 | 32.842 | 475 | 283 | 9 | 24 | 463 | 21 | 494 | 4.96e-75 | 251 |
| MS.gene02885.t1 | MTR_4g022330 | 32.128 | 470 | 295 | 6 | 25 | 473 | 33 | 499 | 2.11e-74 | 249 |
| MS.gene02885.t1 | MTR_8g078900 | 30.584 | 497 | 288 | 8 | 23 | 463 | 17 | 512 | 2.45e-73 | 247 |
| MS.gene02885.t1 | MTR_3g062540 | 30.853 | 457 | 281 | 6 | 25 | 465 | 23 | 460 | 1.18e-72 | 243 |
| MS.gene02885.t1 | MTR_2g048390 | 32.379 | 454 | 267 | 9 | 1 | 415 | 1 | 453 | 3.18e-70 | 234 |
| MS.gene02885.t1 | MTR_5g075640 | 30.538 | 465 | 281 | 6 | 25 | 465 | 24 | 470 | 1.77e-69 | 235 |
| MS.gene02885.t1 | MTR_7g108290 | 32.577 | 485 | 274 | 10 | 17 | 463 | 27 | 496 | 2.58e-69 | 237 |
| MS.gene02885.t1 | MTR_8g078900 | 30.705 | 482 | 277 | 8 | 38 | 463 | 2 | 482 | 5.05e-69 | 235 |
| MS.gene02885.t1 | MTR_7g073980 | 31.185 | 481 | 286 | 11 | 14 | 463 | 21 | 487 | 5.24e-68 | 233 |
| MS.gene02885.t1 | MTR_3g062540 | 31.651 | 436 | 263 | 7 | 46 | 465 | 2 | 418 | 7.83e-68 | 229 |
| MS.gene02885.t1 | MTR_8g078900 | 32.326 | 430 | 254 | 7 | 70 | 463 | 44 | 472 | 2.42e-67 | 230 |
| MS.gene02885.t1 | MTR_1g088885 | 30.247 | 486 | 280 | 10 | 17 | 463 | 27 | 492 | 1.68e-66 | 228 |
| MS.gene02885.t1 | MTR_5g075640 | 30.405 | 444 | 267 | 6 | 46 | 465 | 2 | 427 | 1.85e-63 | 218 |
| MS.gene02885.t1 | MTR_1g082690 | 29.844 | 449 | 271 | 8 | 29 | 463 | 61 | 479 | 1.98e-62 | 215 |
| MS.gene02885.t1 | MTR_2g084595 | 31.616 | 427 | 256 | 9 | 24 | 415 | 21 | 446 | 6.35e-60 | 206 |
| MS.gene02885.t1 | MTR_5g016060 | 32.283 | 381 | 234 | 7 | 104 | 465 | 4 | 379 | 3.48e-57 | 200 |
| MS.gene02885.t1 | MTR_8g078900 | 28.731 | 449 | 263 | 8 | 23 | 415 | 17 | 464 | 2.40e-54 | 191 |
| MS.gene02885.t1 | MTR_8g078900 | 30.366 | 382 | 229 | 7 | 70 | 415 | 44 | 424 | 1.01e-48 | 175 |
| MS.gene02885.t1 | MTR_2g102730 | 34.228 | 298 | 171 | 5 | 183 | 465 | 6 | 293 | 9.63e-41 | 153 |
| MS.gene02885.t1 | MTR_4g011530 | 34.982 | 283 | 151 | 6 | 201 | 465 | 46 | 313 | 3.17e-40 | 152 |
| MS.gene02885.t1 | MTR_4g074190 | 24.948 | 485 | 292 | 11 | 29 | 465 | 6 | 466 | 2.32e-33 | 134 |
| MS.gene02885.t1 | MTR_4g045767 | 27.685 | 419 | 254 | 12 | 70 | 465 | 50 | 442 | 4.44e-33 | 133 |
| MS.gene02885.t1 | MTR_4g074190 | 24.887 | 442 | 264 | 9 | 68 | 465 | 3 | 420 | 1.47e-30 | 125 |
| MS.gene02885.t1 | MTR_1g035720 | 24.950 | 505 | 298 | 14 | 29 | 480 | 6 | 482 | 4.55e-29 | 121 |
| MS.gene02885.t1 | MTR_4g074190 | 24.771 | 436 | 256 | 12 | 29 | 416 | 6 | 417 | 1.43e-27 | 116 |
| MS.gene02885.t1 | MTR_4g080720 | 70.312 | 64 | 19 | 0 | 1 | 64 | 1 | 64 | 4.54e-24 | 96.3 |
| MS.gene02885.t1 | MTR_1g105870 | 31.053 | 190 | 123 | 3 | 33 | 220 | 38 | 221 | 2.38e-23 | 100 |
| MS.gene02885.t1 | MTR_2g010890 | 23.451 | 452 | 284 | 15 | 100 | 527 | 8 | 421 | 2.57e-16 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02885.t1 | AT5G47800 | 55.536 | 569 | 217 | 6 | 1 | 552 | 1 | 550 | 0.0 | 637 |
| MS.gene02885.t1 | AT5G47800 | 55.536 | 569 | 217 | 6 | 1 | 552 | 1 | 550 | 0.0 | 637 |
| MS.gene02885.t1 | AT5G47800 | 55.536 | 569 | 217 | 6 | 1 | 552 | 1 | 550 | 0.0 | 637 |
| MS.gene02885.t1 | AT5G47800 | 55.536 | 569 | 217 | 6 | 1 | 552 | 114 | 663 | 0.0 | 636 |
| MS.gene02885.t1 | AT1G67900 | 43.970 | 539 | 243 | 8 | 1 | 485 | 1 | 534 | 3.97e-140 | 421 |
| MS.gene02885.t1 | AT1G67900 | 43.970 | 539 | 243 | 8 | 1 | 485 | 1 | 534 | 3.97e-140 | 421 |
| MS.gene02885.t1 | AT1G67900 | 43.970 | 539 | 243 | 8 | 1 | 485 | 1 | 534 | 3.97e-140 | 421 |
| MS.gene02885.t1 | AT1G67900 | 43.970 | 539 | 243 | 8 | 1 | 485 | 1 | 534 | 3.97e-140 | 421 |
| MS.gene02885.t1 | AT1G67900 | 43.970 | 539 | 243 | 8 | 1 | 485 | 1 | 534 | 3.97e-140 | 421 |
| MS.gene02885.t1 | AT1G67900 | 43.970 | 539 | 243 | 8 | 1 | 485 | 1 | 534 | 3.97e-140 | 421 |
| MS.gene02885.t1 | AT3G26490 | 39.147 | 539 | 258 | 12 | 1 | 483 | 1 | 525 | 2.86e-118 | 363 |
| MS.gene02885.t1 | AT3G26490 | 39.147 | 539 | 258 | 12 | 1 | 483 | 1 | 525 | 2.86e-118 | 363 |
| MS.gene02885.t1 | AT3G26490 | 39.147 | 539 | 258 | 12 | 1 | 483 | 1 | 525 | 2.86e-118 | 363 |
| MS.gene02885.t1 | AT4G31820 | 36.280 | 543 | 300 | 11 | 1 | 525 | 1 | 515 | 2.76e-117 | 360 |
| MS.gene02885.t1 | AT2G14820 | 37.302 | 504 | 277 | 7 | 1 | 473 | 1 | 496 | 1.10e-115 | 358 |
| MS.gene02885.t1 | AT2G14820 | 37.302 | 504 | 277 | 7 | 1 | 473 | 1 | 496 | 1.10e-115 | 358 |
| MS.gene02885.t1 | AT4G37590 | 39.264 | 489 | 265 | 8 | 1 | 473 | 1 | 473 | 2.17e-112 | 347 |
| MS.gene02885.t1 | AT2G23050 | 37.844 | 473 | 259 | 8 | 1 | 463 | 1 | 448 | 7.48e-110 | 338 |
| MS.gene02885.t1 | AT5G67440 | 38.821 | 492 | 270 | 10 | 1 | 471 | 1 | 482 | 3.71e-108 | 336 |
| MS.gene02885.t1 | AT5G67440 | 38.821 | 492 | 270 | 10 | 1 | 471 | 1 | 482 | 3.71e-108 | 336 |
| MS.gene02885.t1 | AT4G31820 | 35.714 | 490 | 270 | 10 | 53 | 525 | 1 | 462 | 3.89e-102 | 319 |
| MS.gene02885.t1 | AT3G26490 | 39.030 | 474 | 219 | 12 | 1 | 418 | 1 | 460 | 2.90e-98 | 308 |
| MS.gene02885.t1 | AT5G67440 | 38.803 | 451 | 246 | 9 | 41 | 471 | 5 | 445 | 1.05e-96 | 305 |
| MS.gene02885.t1 | AT5G64330 | 32.657 | 591 | 280 | 8 | 7 | 481 | 33 | 621 | 1.28e-90 | 295 |
| MS.gene02885.t1 | AT1G30440 | 34.185 | 509 | 286 | 11 | 1 | 463 | 1 | 506 | 3.31e-88 | 287 |
| MS.gene02885.t1 | AT5G03250 | 33.068 | 502 | 295 | 8 | 1 | 463 | 1 | 500 | 1.93e-82 | 270 |
| MS.gene02885.t1 | AT5G67385 | 32.969 | 458 | 283 | 8 | 25 | 465 | 24 | 474 | 2.01e-81 | 267 |
| MS.gene02885.t1 | AT5G13600 | 34.483 | 493 | 291 | 9 | 1 | 463 | 1 | 491 | 2.12e-81 | 267 |
| MS.gene02885.t1 | AT2G23050 | 38.655 | 357 | 190 | 6 | 111 | 463 | 1 | 332 | 9.30e-78 | 250 |
| MS.gene02885.t1 | AT5G67385 | 33.486 | 436 | 266 | 8 | 47 | 465 | 1 | 429 | 2.45e-76 | 253 |
| MS.gene02885.t1 | AT5G67385 | 33.486 | 436 | 266 | 8 | 47 | 465 | 1 | 429 | 2.45e-76 | 253 |
| MS.gene02885.t1 | AT5G67385 | 33.486 | 436 | 266 | 8 | 47 | 465 | 1 | 429 | 2.45e-76 | 253 |
| MS.gene02885.t1 | AT5G67385 | 33.486 | 436 | 266 | 8 | 47 | 465 | 1 | 429 | 2.45e-76 | 253 |
| MS.gene02885.t1 | AT2G30520 | 32.898 | 459 | 272 | 7 | 25 | 465 | 29 | 469 | 6.49e-75 | 250 |
| MS.gene02885.t1 | AT5G48800 | 31.398 | 465 | 275 | 6 | 25 | 465 | 40 | 484 | 4.61e-73 | 245 |
| MS.gene02885.t1 | AT5G10250 | 28.793 | 580 | 328 | 11 | 5 | 535 | 29 | 572 | 4.27e-72 | 243 |
| MS.gene02885.t1 | AT5G66560 | 31.091 | 550 | 286 | 12 | 23 | 494 | 16 | 550 | 4.38e-72 | 244 |
| MS.gene02885.t1 | AT5G10250 | 29.663 | 563 | 324 | 12 | 8 | 535 | 32 | 557 | 1.54e-71 | 241 |
| MS.gene02885.t1 | AT5G66560 | 33.189 | 461 | 259 | 10 | 68 | 494 | 66 | 511 | 8.59e-70 | 237 |
| MS.gene02885.t1 | AT5G66560 | 33.189 | 461 | 259 | 10 | 68 | 494 | 76 | 521 | 1.34e-69 | 237 |
| MS.gene02885.t1 | AT2G30520 | 32.877 | 438 | 258 | 7 | 46 | 465 | 2 | 421 | 4.38e-69 | 233 |
| MS.gene02885.t1 | AT2G30520 | 32.877 | 438 | 258 | 7 | 46 | 465 | 2 | 421 | 4.38e-69 | 233 |
| MS.gene02885.t1 | AT2G47860 | 31.590 | 478 | 275 | 10 | 23 | 465 | 34 | 494 | 7.40e-69 | 234 |
| MS.gene02885.t1 | AT1G03010 | 31.670 | 521 | 295 | 15 | 23 | 499 | 6 | 509 | 1.24e-68 | 233 |
| MS.gene02885.t1 | AT1G03010 | 31.520 | 533 | 302 | 16 | 11 | 499 | 22 | 535 | 1.36e-68 | 234 |
| MS.gene02885.t1 | AT3G49970 | 32.624 | 423 | 237 | 10 | 38 | 448 | 6 | 392 | 1.86e-68 | 231 |
| MS.gene02885.t1 | AT3G49970 | 32.624 | 423 | 237 | 10 | 38 | 448 | 6 | 392 | 1.86e-68 | 231 |
| MS.gene02885.t1 | AT1G03010 | 31.538 | 520 | 297 | 14 | 23 | 499 | 33 | 536 | 2.26e-68 | 233 |
| MS.gene02885.t1 | AT3G44820 | 31.687 | 486 | 277 | 10 | 29 | 463 | 26 | 507 | 1.19e-65 | 226 |
| MS.gene02885.t1 | AT2G47860 | 30.140 | 501 | 275 | 11 | 23 | 465 | 34 | 517 | 4.56e-64 | 222 |
| MS.gene02885.t1 | AT3G08660 | 28.872 | 523 | 322 | 13 | 19 | 520 | 27 | 520 | 4.01e-62 | 215 |
| MS.gene02885.t1 | AT3G50840 | 32.128 | 470 | 279 | 9 | 16 | 463 | 6 | 457 | 4.17e-61 | 212 |
| MS.gene02885.t1 | AT3G08570 | 30.271 | 479 | 294 | 12 | 13 | 463 | 22 | 488 | 1.36e-60 | 212 |
| MS.gene02885.t1 | AT5G64330 | 38.433 | 268 | 137 | 3 | 7 | 248 | 33 | 298 | 2.61e-54 | 196 |
| MS.gene02885.t1 | AT5G64330 | 37.154 | 253 | 126 | 2 | 262 | 481 | 369 | 621 | 7.32e-39 | 152 |
| MS.gene02885.t1 | AT5G66560 | 30.258 | 466 | 245 | 10 | 26 | 415 | 19 | 480 | 2.47e-53 | 189 |
| MS.gene02885.t1 | AT3G50840 | 31.891 | 439 | 259 | 9 | 47 | 463 | 1 | 421 | 3.79e-53 | 190 |
| MS.gene02885.t1 | AT3G50840 | 31.891 | 439 | 259 | 9 | 47 | 463 | 1 | 421 | 3.79e-53 | 190 |
| MS.gene02885.t1 | AT3G08660 | 28.630 | 489 | 299 | 13 | 53 | 520 | 1 | 460 | 9.03e-53 | 189 |
| MS.gene02885.t1 | AT2G47860 | 30.841 | 428 | 244 | 10 | 23 | 415 | 34 | 444 | 2.58e-52 | 186 |
| MS.gene02885.t1 | AT5G03250 | 30.256 | 390 | 233 | 7 | 111 | 463 | 1 | 388 | 2.01e-48 | 176 |
| MS.gene02885.t1 | AT2G47860 | 29.268 | 451 | 244 | 11 | 23 | 415 | 34 | 467 | 9.13e-48 | 174 |
| MS.gene02885.t1 | AT3G08660 | 28.571 | 420 | 253 | 11 | 19 | 418 | 27 | 419 | 1.93e-46 | 169 |
| MS.gene02885.t1 | AT5G64330 | 38.983 | 236 | 116 | 3 | 39 | 248 | 6 | 239 | 6.83e-46 | 171 |
| MS.gene02885.t1 | AT5G64330 | 37.154 | 253 | 126 | 2 | 262 | 481 | 310 | 562 | 3.29e-39 | 152 |
| MS.gene02885.t1 | AT1G52770 | 34.494 | 316 | 175 | 7 | 201 | 495 | 28 | 332 | 3.39e-44 | 163 |
| MS.gene02885.t1 | AT2G47860 | 28.974 | 390 | 228 | 9 | 111 | 465 | 1 | 376 | 1.32e-42 | 160 |
| MS.gene02885.t1 | AT2G47860 | 28.974 | 390 | 228 | 9 | 111 | 465 | 1 | 376 | 1.32e-42 | 160 |
| MS.gene02885.t1 | AT5G48130 | 27.097 | 465 | 280 | 14 | 24 | 463 | 37 | 467 | 6.09e-41 | 157 |
| MS.gene02885.t1 | AT3G03510 | 31.061 | 396 | 217 | 11 | 80 | 463 | 8 | 359 | 1.01e-39 | 151 |
| MS.gene02885.t1 | AT5G17580 | 26.526 | 475 | 305 | 9 | 10 | 463 | 4 | 455 | 5.83e-37 | 145 |
| MS.gene02885.t1 | AT5G17580 | 27.465 | 426 | 266 | 8 | 59 | 463 | 37 | 440 | 1.55e-36 | 144 |
| MS.gene02885.t1 | AT3G15570 | 30.945 | 307 | 175 | 7 | 189 | 468 | 15 | 311 | 4.80e-35 | 138 |
| MS.gene02885.t1 | AT3G19850 | 25.207 | 484 | 299 | 11 | 21 | 463 | 2 | 463 | 6.93e-35 | 139 |
| MS.gene02885.t1 | AT3G22104 | 26.770 | 452 | 259 | 17 | 29 | 448 | 7 | 418 | 4.48e-27 | 115 |
| MS.gene02885.t1 | AT1G50280 | 22.931 | 423 | 286 | 7 | 66 | 459 | 16 | 427 | 2.74e-26 | 113 |
| MS.gene02885.t1 | AT1G50280 | 22.931 | 423 | 286 | 7 | 66 | 459 | 49 | 460 | 3.27e-26 | 113 |
| MS.gene02885.t1 | AT3G22104 | 26.316 | 380 | 211 | 14 | 98 | 448 | 4 | 343 | 7.69e-17 | 83.6 |
| MS.gene02885.t1 | AT3G22104 | 26.316 | 380 | 211 | 14 | 98 | 448 | 4 | 343 | 7.69e-17 | 83.6 |
| MS.gene02885.t1 | AT3G22104 | 26.316 | 380 | 211 | 14 | 98 | 448 | 4 | 343 | 7.69e-17 | 83.6 |
Find 106 sgRNAs with CRISPR-Local
Find 159 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAGCATTTCAAGTCATTT+AGG | 0.230690 | 2.4:-61638836 | MS.gene02885:CDS |
| GTTCTTCCACCACAGCTAAT+TGG | 0.289528 | 2.4:-61639040 | MS.gene02885:CDS |
| GCACTTCAGGGGACAATCTT+TGG | 0.295952 | 2.4:+61638028 | None:intergenic |
| AAACAACATAAGCTACTTCT+AGG | 0.305988 | 2.4:-61637898 | MS.gene02885:CDS |
| GGCAATAAACATTTATCTTA+AGG | 0.309851 | 2.4:-61638492 | MS.gene02885:intron |
| ACAGCGTGCGCACGCACTTC+AGG | 0.311538 | 2.4:+61638015 | None:intergenic |
| CATTTGCGATGCTGAACTTC+CGG | 0.323956 | 2.4:+61638958 | None:intergenic |
| AGAAGTTATAAATCAGAATA+TGG | 0.331860 | 2.4:-61637613 | MS.gene02885:CDS |
| TCCAAGTTCACCATGCTTCC+TGG | 0.340331 | 2.4:+61637664 | None:intergenic |
| GTCAAGGAAGAAAGTATTCC+AGG | 0.354497 | 2.4:-61637682 | MS.gene02885:CDS |
| ACCCTGGTTCTGTGGACAAC+AGG | 0.367234 | 2.4:-61638670 | MS.gene02885:CDS |
| AGAGTTAGTTCAAGTTGTAT+TGG | 0.373725 | 2.4:-61638723 | MS.gene02885:CDS |
| ACTCTACATCATAAGAATTC+AGG | 0.379747 | 2.4:+61638741 | None:intergenic |
| ATCATAAAGGTTAAAAGTTC+CGG | 0.381413 | 2.4:-61638977 | MS.gene02885:CDS |
| TTTAGTTCATGCATTCTTGA+AGG | 0.388872 | 2.4:-61639437 | MS.gene02885:CDS |
| CTTTCTCTTGGTCATAGTAT+AGG | 0.394661 | 2.4:+61637953 | None:intergenic |
| GTGATTATGTGCAGGTTAAA+TGG | 0.396517 | 2.4:-61639198 | MS.gene02885:intron |
| AGCTGCACAACAGTTCTTAA+TGG | 0.398507 | 2.4:+61637976 | None:intergenic |
| GTTGAGAGGGGAAACTTTGT+AGG | 0.400848 | 2.4:-61639476 | MS.gene02885:CDS |
| TCCTCCGTCCACCAATCCTT+TGG | 0.409004 | 2.4:+61639124 | None:intergenic |
| TCCAGGAAGCATGGTGAACT+TGG | 0.413318 | 2.4:-61637665 | MS.gene02885:CDS |
| CAACGGACTCATTCATTTGA+AGG | 0.422727 | 2.4:+61639495 | None:intergenic |
| CCTTGCCACAACTTGAAGAT+AGG | 0.424728 | 2.4:+61638601 | None:intergenic |
| TTTCCTTTGAGTCTTTCTCT+TGG | 0.425900 | 2.4:+61637941 | None:intergenic |
| AGGGTCAACACAAAACTAAA+AGG | 0.432339 | 2.4:-61637756 | MS.gene02885:CDS |
| CAGAACAAAGTCTTTGTAGA+AGG | 0.439216 | 2.4:+61639666 | None:intergenic |
| GATCATAAGCAAATGCTCAT+AGG | 0.443050 | 2.4:-61637643 | MS.gene02885:CDS |
| GCTGAAAGTGTACCAGCTAT+TGG | 0.449675 | 2.4:-61638542 | MS.gene02885:CDS |
| GTTCATGCATTCTTGAAGGT+TGG | 0.453604 | 2.4:-61639433 | MS.gene02885:CDS |
| TAAGATAAATGTTTATTGCC+TGG | 0.454792 | 2.4:+61638495 | None:intergenic |
| TTAAGATCAATCAGAAAAGT+TGG | 0.457461 | 2.4:-61638638 | MS.gene02885:CDS |
| GAAAAGATCTATATTTAGAA+TGG | 0.463506 | 2.4:+61639096 | None:intergenic |
| ATCATTCTGTTCCAAAGGAT+TGG | 0.466212 | 2.4:-61639135 | MS.gene02885:CDS |
| CGGAAGTTCAGCATCGCAAA+TGG | 0.468266 | 2.4:-61638957 | MS.gene02885:CDS |
| CAGCGTGCGCACGCACTTCA+GGG | 0.472237 | 2.4:+61638016 | None:intergenic |
| GTTAGATGATAAATTAGCCT+TGG | 0.472933 | 2.4:-61637734 | MS.gene02885:CDS |
| AATGCATAAACAGGTGCATT+CGG | 0.477091 | 2.4:-61638097 | MS.gene02885:intron |
| CCATGGCTATCTCTTGTGGC+AGG | 0.481421 | 2.4:+61637862 | None:intergenic |
| TCTTGCTGAGAGTAGAGAAA+AGG | 0.481826 | 2.4:-61637776 | MS.gene02885:CDS |
| TTCCTGTTGTCCACAGAACC+AGG | 0.482017 | 2.4:+61638668 | None:intergenic |
| TCTTGAATTCTTCCTTGTCA+AGG | 0.482245 | 2.4:+61637824 | None:intergenic |
| CATCGCAAATGGAAGAATCC+AGG | 0.483080 | 2.4:-61638946 | MS.gene02885:CDS |
| GCTATGAAGTTCATGAAACT+TGG | 0.484891 | 2.4:-61640082 | MS.gene02885:CDS |
| TGCTCTAATCTGCCAATAGC+TGG | 0.487466 | 2.4:+61638530 | None:intergenic |
| CCAGAGTGGTCTGAGAATCT+TGG | 0.492441 | 2.4:-61639371 | MS.gene02885:CDS |
| GATGGTTATAAGAGGAGTCA+AGG | 0.495344 | 2.4:-61637698 | MS.gene02885:CDS |
| AGCCATGGTAAAGGATCTCT+TGG | 0.500525 | 2.4:-61637847 | MS.gene02885:CDS |
| GTGGTTACCTTGCATCATAA+AGG | 0.502589 | 2.4:-61638990 | MS.gene02885:CDS |
| TATAAGATAAGTTGTATCGT+TGG | 0.507629 | 2.4:+61639808 | None:intergenic |
| TCTCCACTTGTTTCAAAATG+TGG | 0.518950 | 2.4:-61639689 | MS.gene02885:CDS |
| TTTACCATGGCTATCTCTTG+TGG | 0.524518 | 2.4:+61637858 | None:intergenic |
| CTTGCTGAGAGTAGAGAAAA+GGG | 0.528622 | 2.4:-61637775 | MS.gene02885:CDS |
| TGATTCCTATCTTCAAGTTG+TGG | 0.532607 | 2.4:-61638606 | MS.gene02885:CDS |
| GCGGAAAAGAAGCGCTTGTG+TGG | 0.534519 | 2.4:-61638063 | MS.gene02885:CDS |
| ATTGTAACCGGGCCTAGTGT+AGG | 0.539100 | 2.4:+61639168 | None:intergenic |
| ATTCTGTTCCAAAGGATTGG+TGG | 0.543253 | 2.4:-61639132 | MS.gene02885:CDS |
| AGCATGATTCCTGCAGATAG+AGG | 0.543978 | 2.4:-61638890 | MS.gene02885:CDS |
| CTATCTTCAAGTTGTGGCAA+GGG | 0.544076 | 2.4:-61638600 | MS.gene02885:CDS |
| TGCATGTATATGCATGTAAG+TGG | 0.544550 | 2.4:-61639009 | MS.gene02885:CDS |
| GATAGAGGTTCAGTTTCAGT+TGG | 0.544692 | 2.4:-61638875 | MS.gene02885:CDS |
| GAAACTGAACCTCTATCTGC+AGG | 0.546404 | 2.4:+61638881 | None:intergenic |
| AATGAATGAGTCCGTTGAGA+GGG | 0.548065 | 2.4:-61639489 | MS.gene02885:CDS |
| GCTTCACCAATTAGCTGTGG+TGG | 0.553316 | 2.4:+61639034 | None:intergenic |
| CCTATCTTCAAGTTGTGGCA+AGG | 0.556195 | 2.4:-61638601 | MS.gene02885:CDS |
| TCCTACACCTACACTAGGCC+CGG | 0.558420 | 2.4:-61639175 | MS.gene02885:CDS |
| ACAAGAGATAGCCATGGTAA+AGG | 0.563901 | 2.4:-61637856 | MS.gene02885:CDS |
| AGTTCTTACACCCTTATCAC+AGG | 0.568010 | 2.4:-61639312 | MS.gene02885:intron |
| AGTGGCGTGCAACGTTGCAA+TGG | 0.572556 | 2.4:+61639403 | None:intergenic |
| CTAGAGCTTAATGATATGCC+TGG | 0.572616 | 2.4:-61639617 | MS.gene02885:CDS |
| AGAGCATCATTCTGTTCCAA+AGG | 0.584180 | 2.4:-61639140 | MS.gene02885:CDS |
| CCAAGATTCTCAGACCACTC+TGG | 0.584674 | 2.4:+61639371 | None:intergenic |
| GGCATATCATTAAGCTCTAG+AGG | 0.584689 | 2.4:+61639620 | None:intergenic |
| AAGAATCTACCCTGGTTCTG+TGG | 0.585804 | 2.4:-61638678 | MS.gene02885:CDS |
| TTCTCTACTCTCAGCAAGAG+AGG | 0.587532 | 2.4:+61637780 | None:intergenic |
| AGAGCATGATGATTTGTACC+AGG | 0.593159 | 2.4:-61638513 | MS.gene02885:CDS |
| AGAAAGTATTCCAGGAAGCA+TGG | 0.597512 | 2.4:-61637674 | MS.gene02885:CDS |
| AGAGCTACAAACTTTGACAC+TGG | 0.597683 | 2.4:+61638566 | None:intergenic |
| ATCGCAAATGGAAGAATCCA+GGG | 0.604485 | 2.4:-61638945 | MS.gene02885:CDS |
| ATAAGCAAATGCTCATAGGA+AGG | 0.605385 | 2.4:-61637639 | MS.gene02885:CDS |
| TCTACACGGAACAAGCTACC+AGG | 0.606588 | 2.4:-61640042 | MS.gene02885:intron |
| AGCTTAGCAGCACAAAGTGA+AGG | 0.608513 | 2.4:+61639518 | None:intergenic |
| TACAAAGTTTCCCCTCTCAA+CGG | 0.611119 | 2.4:+61639478 | None:intergenic |
| TGTTCCAAAGGATTGGTGGA+CGG | 0.611507 | 2.4:-61639128 | MS.gene02885:CDS |
| TGACCAAGAGAAAGACTCAA+AGG | 0.612388 | 2.4:-61637944 | MS.gene02885:CDS |
| AGCGTGCGCACGCACTTCAG+GGG | 0.616562 | 2.4:+61638017 | None:intergenic |
| CGGAAAAGAAGCGCTTGTGT+GGG | 0.622895 | 2.4:-61638062 | MS.gene02885:CDS |
| TCAAAAGCTTCTGATCCACC+AGG | 0.628037 | 2.4:+61639599 | None:intergenic |
| AAATGAATGAGTCCGTTGAG+AGG | 0.628513 | 2.4:-61639490 | MS.gene02885:CDS |
| AGGATCTCTTGGCCTTGACA+AGG | 0.630881 | 2.4:-61637836 | MS.gene02885:CDS |
| GGTGCATTCGGACTTGAGCA+AGG | 0.634297 | 2.4:-61638085 | MS.gene02885:CDS |
| TCCTGTTGTCCACAGAACCA+GGG | 0.640405 | 2.4:+61638669 | None:intergenic |
| AGTTCATGAAACTTGGAACA+AGG | 0.644491 | 2.4:-61640075 | MS.gene02885:CDS |
| ATGAATGAGTCCGTTGAGAG+GGG | 0.649978 | 2.4:-61639488 | MS.gene02885:CDS |
| TCCAAAGGATTGGTGGACGG+AGG | 0.657384 | 2.4:-61639125 | MS.gene02885:CDS |
| GAGCTTAATGATATGCCTGG+TGG | 0.663018 | 2.4:-61639614 | MS.gene02885:CDS |
| AATGGTCCTACACCTACACT+AGG | 0.678371 | 2.4:-61639180 | MS.gene02885:CDS |
| TACAACTTATCTTATACACA+AGG | 0.683273 | 2.4:-61639801 | MS.gene02885:intron |
| GGCCAAGAGATCCTTTACCA+TGG | 0.685445 | 2.4:+61637845 | None:intergenic |
| AAGGTCAGATACTTTCTACA+CGG | 0.691782 | 2.4:-61640056 | MS.gene02885:CDS |
| AAAGCTTCACCAATTAGCTG+TGG | 0.694004 | 2.4:+61639031 | None:intergenic |
| ACCGGGCCTAGTGTAGGTGT+AGG | 0.701731 | 2.4:+61639174 | None:intergenic |
| CCTGCCACAAGAGATAGCCA+TGG | 0.709754 | 2.4:-61637862 | MS.gene02885:CDS |
| AAGTAGCATACAGTTTCACG+AGG | 0.711955 | 2.4:-61638777 | MS.gene02885:CDS |
| CCACTCTGGTAACTTCTCAG+TGG | 0.722395 | 2.4:+61639385 | None:intergenic |
| GCATTCGGACTTGAGCAAGG+CGG | 0.760136 | 2.4:-61638082 | MS.gene02885:CDS |
| CCACTGAGAAGTTACCAGAG+TGG | 0.775962 | 2.4:-61639385 | MS.gene02885:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAAAAAAAAAAAAAAATGA+AGG | - | chr2.4:61638383-61638402 | MS.gene02885:intron | 10.0% |
| !!! | ATTTTCAATGTTTTAAAAAA+CGG | - | chr2.4:61639385-61639404 | MS.gene02885:CDS | 10.0% |
| !! | AGAAGTTATAAATCAGAATA+TGG | - | chr2.4:61640060-61640079 | MS.gene02885:CDS | 20.0% |
| !! | ATAAATCTTGGTTATATCTA+TGG | - | chr2.4:61639528-61639547 | MS.gene02885:CDS | 20.0% |
| !! | CATTCATGATTATGATAATA+AGG | + | chr2.4:61637801-61637820 | None:intergenic | 20.0% |
| !! | GAAAAGATCTATATTTAGAA+TGG | + | chr2.4:61638580-61638599 | None:intergenic | 20.0% |
| !! | TATAACCAAGATTTATAATG+TGG | + | chr2.4:61639524-61639543 | None:intergenic | 20.0% |
| !! | TTTGATATTGCAGAAATTTA+CGG | + | chr2.4:61639482-61639501 | None:intergenic | 20.0% |
| !!! | TAAACTGTCTTAAATTTTCA+TGG | - | chr2.4:61639253-61639272 | MS.gene02885:intron | 20.0% |
| !!! | TTCTAAATATAGATCTTTTC+AGG | - | chr2.4:61638580-61638599 | MS.gene02885:CDS | 20.0% |
| !!! | TTTTTTTTTACCTGTGATAA+GGG | + | chr2.4:61638374-61638393 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTACCTGTGATA+AGG | + | chr2.4:61638375-61638394 | None:intergenic | 20.0% |
| ! | ATCATAAAGGTTAAAAGTTC+CGG | - | chr2.4:61638696-61638715 | MS.gene02885:CDS | 25.0% |
| ! | ATTATCATAATCATGAATGC+AGG | - | chr2.4:61637802-61637821 | MS.gene02885:CDS | 25.0% |
| ! | GGCAATAAACATTTATCTTA+AGG | - | chr2.4:61639181-61639200 | MS.gene02885:CDS | 25.0% |
| ! | TAAGATAAATGTTTATTGCC+TGG | + | chr2.4:61639181-61639200 | None:intergenic | 25.0% |
| ! | TACAACTTATCTTATACACA+AGG | - | chr2.4:61637872-61637891 | MS.gene02885:CDS | 25.0% |
| ! | TATAAGATAAGTTGTATCGT+TGG | + | chr2.4:61637868-61637887 | None:intergenic | 25.0% |
| ! | TCTCAAATCAAATAATGATG+TGG | + | chr2.4:61637732-61637751 | None:intergenic | 25.0% |
| ! | TGTGAATGAAATAACATGAT+TGG | + | chr2.4:61639226-61639245 | None:intergenic | 25.0% |
| ! | TTAAGATCAATCAGAAAAGT+TGG | - | chr2.4:61639035-61639054 | MS.gene02885:CDS | 25.0% |
| ! | TTCATCTGTGGTTTATAATT+AGG | - | chr2.4:61637662-61637681 | MS.gene02885:CDS | 25.0% |
| !! | AGATTTTGTTGACAAGATAT+AGG | - | chr2.4:61637749-61637768 | MS.gene02885:CDS | 25.0% |
| !! | GAACATTTTATGTCTAACAA+TGG | - | chr2.4:61638453-61638472 | MS.gene02885:intron | 25.0% |
| !!! | AATTTTTCTGTTTTTTTCCC+TGG | + | chr2.4:61638748-61638767 | None:intergenic | 25.0% |
| !!! | TGGAAAGTTTTTTGAAGTTT+TGG | - | chr2.4:61638970-61638989 | MS.gene02885:CDS | 25.0% |
| AAACAACATAAGCTACTTCT+AGG | - | chr2.4:61639775-61639794 | MS.gene02885:intron | 30.0% | |
| ACTCTACATCATAAGAATTC+AGG | + | chr2.4:61638935-61638954 | None:intergenic | 30.0% | |
| CATAATAATTGAGAGACACA+TGG | - | chr2.4:61638422-61638441 | MS.gene02885:intron | 30.0% | |
| GAGAAAAAGATGGTTATAAG+AGG | - | chr2.4:61639967-61639986 | MS.gene02885:intron | 30.0% | |
| GTGTCTCTCAATTATTATGA+GGG | + | chr2.4:61638421-61638440 | None:intergenic | 30.0% | |
| TGTCTCTCAATTATTATGAG+GGG | + | chr2.4:61638420-61638439 | None:intergenic | 30.0% | |
| TGTGACCACATTATAAATCT+TGG | - | chr2.4:61639516-61639535 | MS.gene02885:CDS | 30.0% | |
| TGTGTCTCTCAATTATTATG+AGG | + | chr2.4:61638422-61638441 | None:intergenic | 30.0% | |
| TGTTGACAAGATATAGGTAT+AGG | - | chr2.4:61637755-61637774 | MS.gene02885:CDS | 30.0% | |
| TTATCTTATACACAAGGTAC+CGG | - | chr2.4:61637878-61637897 | MS.gene02885:CDS | 30.0% | |
| ! | ATGCTCTTTTCTATTGTAAC+CGG | + | chr2.4:61638520-61638539 | None:intergenic | 30.0% |
| ! | CTTTTAACCTTTATGATGCA+AGG | + | chr2.4:61638693-61638712 | None:intergenic | 30.0% |
| ! | GTCAAGTCAGCTTTTAATAT+AGG | - | chr2.4:61639359-61639378 | MS.gene02885:CDS | 30.0% |
| ! | GTTAGATGATAAATTAGCCT+TGG | - | chr2.4:61639939-61639958 | MS.gene02885:intron | 30.0% |
| ! | TATTATGAGGGGAAGTTTTA+TGG | + | chr2.4:61638409-61638428 | None:intergenic | 30.0% |
| ! | TTGAGCATTTCAAGTCATTT+AGG | - | chr2.4:61638837-61638856 | MS.gene02885:CDS | 30.0% |
| ! | TTTAGTTCATGCATTCTTGA+AGG | - | chr2.4:61638236-61638255 | MS.gene02885:intron | 30.0% |
| ! | TTTTTGCAACTTTGTACTAG+AGG | + | chr2.4:61639758-61639777 | None:intergenic | 30.0% |
| !! | AGAGTTAGTTCAAGTTGTAT+TGG | - | chr2.4:61638950-61638969 | MS.gene02885:CDS | 30.0% |
| !! | TTGGTTTTTATCACAAGATC+AGG | + | chr2.4:61637849-61637868 | None:intergenic | 30.0% |
| AAGGTCAGATACTTTCTACA+CGG | - | chr2.4:61637617-61637636 | MS.gene02885:CDS | 35.0% | |
| AATGCATAAACAGGTGCATT+CGG | - | chr2.4:61639576-61639595 | MS.gene02885:CDS | 35.0% | |
| AGGGTCAACACAAAACTAAA+AGG | - | chr2.4:61639917-61639936 | MS.gene02885:intron | 35.0% | |
| AGTTCATGAAACTTGGAACA+AGG | - | chr2.4:61637598-61637617 | MS.gene02885:CDS | 35.0% | |
| ATAAGCAAATGCTCATAGGA+AGG | - | chr2.4:61640034-61640053 | MS.gene02885:intron | 35.0% | |
| ATCATTCTGTTCCAAAGGAT+TGG | - | chr2.4:61638538-61638557 | MS.gene02885:CDS | 35.0% | |
| ATTAGACCCTTTACGACAAT+TGG | - | chr2.4:61639283-61639302 | MS.gene02885:intron | 35.0% | |
| CACAGATGAAAATGAATACC+TGG | + | chr2.4:61637652-61637671 | None:intergenic | 35.0% | |
| CACCACACTCAATTTAATTC+CGG | + | chr2.4:61637900-61637919 | None:intergenic | 35.0% | |
| CAGAAATTTACGGTCAAATG+AGG | + | chr2.4:61639472-61639491 | None:intergenic | 35.0% | |
| CAGAACAAAGTCTTTGTAGA+AGG | + | chr2.4:61638010-61638029 | None:intergenic | 35.0% | |
| CTTTCTCTTGGTCATAGTAT+AGG | + | chr2.4:61639723-61639742 | None:intergenic | 35.0% | |
| GATCATAAGCAAATGCTCAT+AGG | - | chr2.4:61640030-61640049 | MS.gene02885:intron | 35.0% | |
| GTGATTATGTGCAGGTTAAA+TGG | - | chr2.4:61638475-61638494 | MS.gene02885:intron | 35.0% | |
| TAACAATGGTGATTATGTGC+AGG | - | chr2.4:61638467-61638486 | MS.gene02885:intron | 35.0% | |
| TACCGGAATTAAATTGAGTG+TGG | - | chr2.4:61637895-61637914 | MS.gene02885:CDS | 35.0% | |
| TCTCCACTTGTTTCAAAATG+TGG | - | chr2.4:61637984-61638003 | MS.gene02885:CDS | 35.0% | |
| TCTTGAATTCTTCCTTGTCA+AGG | + | chr2.4:61639852-61639871 | None:intergenic | 35.0% | |
| TGCATGTATATGCATGTAAG+TGG | - | chr2.4:61638664-61638683 | MS.gene02885:CDS | 35.0% | |
| TGTGTGTTCAATGCATAAAC+AGG | - | chr2.4:61639567-61639586 | MS.gene02885:CDS | 35.0% | |
| TTAGACCCTTTACGACAATT+GGG | - | chr2.4:61639284-61639303 | MS.gene02885:intron | 35.0% | |
| TTTCCTTTGAGTCTTTCTCT+TGG | + | chr2.4:61639735-61639754 | None:intergenic | 35.0% | |
| ! | CAGGTATTCATTTTCATCTG+TGG | - | chr2.4:61637650-61637669 | MS.gene02885:CDS | 35.0% |
| ! | CATCTTTTTCTCAAAGTCCA+AGG | + | chr2.4:61639959-61639978 | None:intergenic | 35.0% |
| ! | CTTGGACTTTGAGAAAAAGA+TGG | - | chr2.4:61639957-61639976 | MS.gene02885:intron | 35.0% |
| ! | CTTTGTGCAAAGTTTTGCTA+TGG | - | chr2.4:61638098-61638117 | MS.gene02885:intron | 35.0% |
| ! | GTTTTTATCACAAGATCAGG+AGG | + | chr2.4:61637846-61637865 | None:intergenic | 35.0% |
| ! | TGCTCTTTTCTATTGTAACC+GGG | + | chr2.4:61638519-61638538 | None:intergenic | 35.0% |
| !! | TGATTCCTATCTTCAAGTTG+TGG | - | chr2.4:61639067-61639086 | MS.gene02885:CDS | 35.0% |
| !! | TTTTGGAAAAGAATCTACCC+TGG | - | chr2.4:61638987-61639006 | MS.gene02885:CDS | 35.0% |
| AAAGCTTCACCAATTAGCTG+TGG | + | chr2.4:61638645-61638664 | None:intergenic | 40.0% | |
| AAATGAATGAGTCCGTTGAG+AGG | - | chr2.4:61638183-61638202 | MS.gene02885:intron | 40.0% | |
| AAGTAGCATACAGTTTCACG+AGG | - | chr2.4:61638896-61638915 | MS.gene02885:CDS | 40.0% | |
| AATGAATGAGTCCGTTGAGA+GGG | - | chr2.4:61638184-61638203 | MS.gene02885:intron | 40.0% | |
| ACAAGAGATAGCCATGGTAA+AGG | - | chr2.4:61639817-61639836 | MS.gene02885:CDS | 40.0% | |
| ACTTAGCCCAATTGTCGTAA+AGG | + | chr2.4:61639293-61639312 | None:intergenic | 40.0% | |
| AGAGCTACAAACTTTGACAC+TGG | + | chr2.4:61639110-61639129 | None:intergenic | 40.0% | |
| AGCTGCACAACAGTTCTTAA+TGG | + | chr2.4:61639700-61639719 | None:intergenic | 40.0% | |
| AGTTCTTACACCCTTATCAC+AGG | - | chr2.4:61638361-61638380 | MS.gene02885:intron | 40.0% | |
| ATCGCAAATGGAAGAATCCA+GGG | - | chr2.4:61638728-61638747 | MS.gene02885:CDS | 40.0% | |
| ATTCTGTTCCAAAGGATTGG+TGG | - | chr2.4:61638541-61638560 | MS.gene02885:CDS | 40.0% | |
| CTAGAGCTTAATGATATGCC+TGG | - | chr2.4:61638056-61638075 | MS.gene02885:CDS | 40.0% | |
| CTTAGCCCAATTGTCGTAAA+GGG | + | chr2.4:61639292-61639311 | None:intergenic | 40.0% | |
| CTTGCTGAGAGTAGAGAAAA+GGG | - | chr2.4:61639898-61639917 | MS.gene02885:intron | 40.0% | |
| GATAGAGGTTCAGTTTCAGT+TGG | - | chr2.4:61638798-61638817 | MS.gene02885:CDS | 40.0% | |
| GATGGTTATAAGAGGAGTCA+AGG | - | chr2.4:61639975-61639994 | MS.gene02885:intron | 40.0% | |
| GTGGTTACCTTGCATCATAA+AGG | - | chr2.4:61638683-61638702 | MS.gene02885:CDS | 40.0% | |
| GTTCATGCATTCTTGAAGGT+TGG | - | chr2.4:61638240-61638259 | MS.gene02885:intron | 40.0% | |
| TACAAAGTTTCCCCTCTCAA+CGG | + | chr2.4:61638198-61638217 | None:intergenic | 40.0% | |
| TCTTGCTGAGAGTAGAGAAA+AGG | - | chr2.4:61639897-61639916 | MS.gene02885:intron | 40.0% | |
| TGACCAAGAGAAAGACTCAA+AGG | - | chr2.4:61639729-61639748 | MS.gene02885:intron | 40.0% | |
| TTTACCATGGCTATCTCTTG+TGG | + | chr2.4:61639818-61639837 | None:intergenic | 40.0% | |
| ! | AGAGCATCATTCTGTTCCAA+AGG | - | chr2.4:61638533-61638552 | MS.gene02885:CDS | 40.0% |
| ! | AGAGCATGATGATTTGTACC+AGG | - | chr2.4:61639160-61639179 | MS.gene02885:CDS | 40.0% |
| ! | CAACGGACTCATTCATTTGA+AGG | + | chr2.4:61638181-61638200 | None:intergenic | 40.0% |
| ! | CTGTATTGTCAGGGTTTTTG+AGG | - | chr2.4:61639427-61639446 | MS.gene02885:CDS | 40.0% |
| ! | GGCATATCATTAAGCTCTAG+AGG | + | chr2.4:61638056-61638075 | None:intergenic | 40.0% |
| !! | AGAAAGTATTCCAGGAAGCA+TGG | - | chr2.4:61639999-61640018 | MS.gene02885:intron | 40.0% |
| !! | CTATCTTCAAGTTGTGGCAA+GGG | - | chr2.4:61639073-61639092 | MS.gene02885:CDS | 40.0% |
| !! | GTCAAGGAAGAAAGTATTCC+AGG | - | chr2.4:61639991-61640010 | MS.gene02885:intron | 40.0% |
| !!! | AGGCCACATTTTGAAACAAG+TGG | + | chr2.4:61637990-61638009 | None:intergenic | 40.0% |
| AATGGTCCTACACCTACACT+AGG | - | chr2.4:61638493-61638512 | MS.gene02885:CDS | 45.0% | |
| AGCATGATTCCTGCAGATAG+AGG | - | chr2.4:61638783-61638802 | MS.gene02885:CDS | 45.0% | |
| AGCCATGGTAAAGGATCTCT+TGG | - | chr2.4:61639826-61639845 | MS.gene02885:CDS | 45.0% | |
| AGCTTAGCAGCACAAAGTGA+AGG | + | chr2.4:61638158-61638177 | None:intergenic | 45.0% | |
| ATGAATGAGTCCGTTGAGAG+GGG | - | chr2.4:61638185-61638204 | MS.gene02885:intron | 45.0% | |
| CAGTTGTGGCTGTATTGTCA+GGG | - | chr2.4:61639418-61639437 | MS.gene02885:CDS | 45.0% | |
| CATCGCAAATGGAAGAATCC+AGG | - | chr2.4:61638727-61638746 | MS.gene02885:CDS | 45.0% | |
| CATTTGCGATGCTGAACTTC+CGG | + | chr2.4:61638718-61638737 | None:intergenic | 45.0% | |
| CCTTGCCACAACTTGAAGAT+AGG | + | chr2.4:61639075-61639094 | None:intergenic | 45.0% | |
| GAAACTGAACCTCTATCTGC+AGG | + | chr2.4:61638795-61638814 | None:intergenic | 45.0% | |
| GAGCTTAATGATATGCCTGG+TGG | - | chr2.4:61638059-61638078 | MS.gene02885:CDS | 45.0% | |
| GTTCTTCCACCACAGCTAAT+TGG | - | chr2.4:61638633-61638652 | MS.gene02885:CDS | 45.0% | |
| GTTGAGAGGGGAAACTTTGT+AGG | - | chr2.4:61638197-61638216 | MS.gene02885:intron | 45.0% | |
| TCAAAAGCTTCTGATCCACC+AGG | + | chr2.4:61638077-61638096 | None:intergenic | 45.0% | |
| TGCTCTAATCTGCCAATAGC+TGG | + | chr2.4:61639146-61639165 | None:intergenic | 45.0% | |
| TTCTCTACTCTCAGCAAGAG+AGG | + | chr2.4:61639896-61639915 | None:intergenic | 45.0% | |
| ! | GCTGAAAGTGTACCAGCTAT+TGG | - | chr2.4:61639131-61639150 | MS.gene02885:CDS | 45.0% |
| ! | TGTTCCAAAGGATTGGTGGA+CGG | - | chr2.4:61638545-61638564 | MS.gene02885:CDS | 45.0% |
| !! | AAGAATCTACCCTGGTTCTG+TGG | - | chr2.4:61638995-61639014 | MS.gene02885:CDS | 45.0% |
| !! | CCTATCTTCAAGTTGTGGCA+AGG | - | chr2.4:61639072-61639091 | MS.gene02885:CDS | 45.0% |
| ATTGTAACCGGGCCTAGTGT+AGG | + | chr2.4:61638508-61638527 | None:intergenic | 50.0% | |
| CCAAGATTCTCAGACCACTC+TGG | + | chr2.4:61638305-61638324 | None:intergenic | 50.0% | |
| CCACTCTGGTAACTTCTCAG+TGG | + | chr2.4:61638291-61638310 | None:intergenic | 50.0% | |
| CCACTGAGAAGTTACCAGAG+TGG | - | chr2.4:61638288-61638307 | MS.gene02885:intron | 50.0% | |
| CCAGAGTGGTCTGAGAATCT+TGG | - | chr2.4:61638302-61638321 | MS.gene02885:intron | 50.0% | |
| CGGAAGTTCAGCATCGCAAA+TGG | - | chr2.4:61638716-61638735 | MS.gene02885:CDS | 50.0% | |
| GCACTTCAGGGGACAATCTT+TGG | + | chr2.4:61639648-61639667 | None:intergenic | 50.0% | |
| GCAGTTGTGGCTGTATTGTC+AGG | - | chr2.4:61639417-61639436 | MS.gene02885:CDS | 50.0% | |
| GCTTCACCAATTAGCTGTGG+TGG | + | chr2.4:61638642-61638661 | None:intergenic | 50.0% | |
| GGCCAAGAGATCCTTTACCA+TGG | + | chr2.4:61639831-61639850 | None:intergenic | 50.0% | |
| TCCAAGTTCACCATGCTTCC+TGG | + | chr2.4:61640012-61640031 | None:intergenic | 50.0% | |
| TCCTGTTGTCCACAGAACCA+GGG | + | chr2.4:61639007-61639026 | None:intergenic | 50.0% | |
| TCTACACGGAACAAGCTACC+AGG | - | chr2.4:61637631-61637650 | MS.gene02885:CDS | 50.0% | |
| TTCCTGTTGTCCACAGAACC+AGG | + | chr2.4:61639008-61639027 | None:intergenic | 50.0% | |
| ! | TCCAGGAAGCATGGTGAACT+TGG | - | chr2.4:61640008-61640027 | MS.gene02885:intron | 50.0% |
| !! | AGGATCTCTTGGCCTTGACA+AGG | - | chr2.4:61639837-61639856 | MS.gene02885:CDS | 50.0% |
| !! | CGGAAAAGAAGCGCTTGTGT+GGG | - | chr2.4:61639611-61639630 | MS.gene02885:CDS | 50.0% |
| AGTGGCGTGCAACGTTGCAA+TGG | + | chr2.4:61638273-61638292 | None:intergenic | 55.0% | |
| CCATGGCTATCTCTTGTGGC+AGG | + | chr2.4:61639814-61639833 | None:intergenic | 55.0% | |
| CCTGCCACAAGAGATAGCCA+TGG | - | chr2.4:61639811-61639830 | MS.gene02885:CDS | 55.0% | |
| GCATTCGGACTTGAGCAAGG+CGG | - | chr2.4:61639591-61639610 | MS.gene02885:CDS | 55.0% | |
| GGTGCATTCGGACTTGAGCA+AGG | - | chr2.4:61639588-61639607 | MS.gene02885:CDS | 55.0% | |
| TCCTACACCTACACTAGGCC+CGG | - | chr2.4:61638498-61638517 | MS.gene02885:CDS | 55.0% | |
| TCCTCCGTCCACCAATCCTT+TGG | + | chr2.4:61638552-61638571 | None:intergenic | 55.0% | |
| ! | TCCAAAGGATTGGTGGACGG+AGG | - | chr2.4:61638548-61638567 | MS.gene02885:CDS | 55.0% |
| !! | ACCCTGGTTCTGTGGACAAC+AGG | - | chr2.4:61639003-61639022 | MS.gene02885:CDS | 55.0% |
| !! | GCGGAAAAGAAGCGCTTGTG+TGG | - | chr2.4:61639610-61639629 | MS.gene02885:CDS | 55.0% |
| ACCGGGCCTAGTGTAGGTGT+AGG | + | chr2.4:61638502-61638521 | None:intergenic | 60.0% | |
| ACGGTCTGCGACTGCAGTTG+TGG | - | chr2.4:61639404-61639423 | MS.gene02885:CDS | 60.0% | |
| ACAGCGTGCGCACGCACTTC+AGG | + | chr2.4:61639661-61639680 | None:intergenic | 65.0% | |
| AGCGTGCGCACGCACTTCAG+GGG | + | chr2.4:61639659-61639678 | None:intergenic | 65.0% | |
| CAGCGTGCGCACGCACTTCA+GGG | + | chr2.4:61639660-61639679 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 61637594 | 61640101 | 61637594 | ID=MS.gene02885 |
| chr2.4 | mRNA | 61637594 | 61640101 | 61637594 | ID=MS.gene02885.t1;Parent=MS.gene02885 |
| chr2.4 | exon | 61640043 | 61640101 | 61640043 | ID=MS.gene02885.t1.exon1;Parent=MS.gene02885.t1 |
| chr2.4 | CDS | 61640043 | 61640101 | 61640043 | ID=cds.MS.gene02885.t1;Parent=MS.gene02885.t1 |
| chr2.4 | exon | 61639802 | 61639871 | 61639802 | ID=MS.gene02885.t1.exon2;Parent=MS.gene02885.t1 |
| chr2.4 | CDS | 61639802 | 61639871 | 61639802 | ID=cds.MS.gene02885.t1;Parent=MS.gene02885.t1 |
| chr2.4 | exon | 61639313 | 61639711 | 61639313 | ID=MS.gene02885.t1.exon3;Parent=MS.gene02885.t1 |
| chr2.4 | CDS | 61639313 | 61639711 | 61639313 | ID=cds.MS.gene02885.t1;Parent=MS.gene02885.t1 |
| chr2.4 | exon | 61638493 | 61639206 | 61638493 | ID=MS.gene02885.t1.exon4;Parent=MS.gene02885.t1 |
| chr2.4 | CDS | 61638493 | 61639206 | 61638493 | ID=cds.MS.gene02885.t1;Parent=MS.gene02885.t1 |
| chr2.4 | exon | 61637594 | 61638106 | 61637594 | ID=MS.gene02885.t1.exon5;Parent=MS.gene02885.t1 |
| chr2.4 | CDS | 61637594 | 61638106 | 61637594 | ID=cds.MS.gene02885.t1;Parent=MS.gene02885.t1 |
| Gene Sequence |
| Protein sequence |
