Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02897.t1 | XP_003594309.1 | 97.6 | 166 | 4 | 0 | 1 | 166 | 1 | 166 | 1.80E-83 | 318.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02897.t1 | Q9FIK8 | 69.3 | 166 | 51 | 0 | 1 | 166 | 1 | 166 | 1.1e-62 | 240.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02897.t1 | B7FKB0 | 97.6 | 166 | 4 | 0 | 1 | 166 | 1 | 166 | 1.3e-83 | 318.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene026566 | MS.gene02897 | PPI |
| MS.gene83105 | MS.gene02897 | PPI |
| MS.gene62964 | MS.gene02897 | PPI |
| MS.gene59112 | MS.gene02897 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02897.t1 | MTR_2g027100 | 97.590 | 166 | 4 | 0 | 1 | 166 | 1 | 166 | 4.65e-116 | 325 |
| MS.gene02897.t1 | MTR_8g088320 | 46.012 | 163 | 75 | 2 | 1 | 157 | 161 | 316 | 7.02e-40 | 137 |
| MS.gene02897.t1 | MTR_2g011590 | 43.791 | 153 | 84 | 1 | 5 | 157 | 4 | 154 | 8.29e-40 | 132 |
| MS.gene02897.t1 | MTR_3g067585 | 43.312 | 157 | 87 | 1 | 1 | 157 | 1 | 155 | 1.68e-39 | 132 |
| MS.gene02897.t1 | MTR_6g069470 | 40.127 | 157 | 92 | 2 | 1 | 157 | 13 | 167 | 5.77e-37 | 125 |
| MS.gene02897.t1 | MTR_2g030230 | 44.586 | 157 | 86 | 1 | 1 | 157 | 168 | 323 | 1.31e-36 | 129 |
| MS.gene02897.t1 | MTR_8g107340 | 42.675 | 157 | 88 | 1 | 1 | 157 | 17 | 171 | 2.44e-36 | 124 |
| MS.gene02897.t1 | MTR_3g017500 | 45.223 | 157 | 85 | 1 | 1 | 157 | 209 | 364 | 1.58e-33 | 122 |
| MS.gene02897.t1 | MTR_3g017500 | 45.223 | 157 | 85 | 1 | 1 | 157 | 239 | 394 | 3.36e-33 | 121 |
| MS.gene02897.t1 | MTR_8g038400 | 42.675 | 157 | 89 | 1 | 1 | 157 | 206 | 361 | 5.01e-31 | 115 |
| MS.gene02897.t1 | MTR_4g084280 | 39.474 | 152 | 90 | 1 | 1 | 152 | 1 | 150 | 6.92e-31 | 110 |
| MS.gene02897.t1 | MTR_1g031650 | 42.282 | 149 | 83 | 2 | 5 | 152 | 6 | 152 | 5.51e-30 | 107 |
| MS.gene02897.t1 | MTR_1g031650 | 40.517 | 116 | 67 | 1 | 37 | 152 | 2 | 115 | 2.15e-20 | 82.0 |
| MS.gene02897.t1 | MTR_1g008950 | 35.417 | 96 | 60 | 2 | 6 | 99 | 4 | 99 | 9.60e-13 | 62.0 |
| MS.gene02897.t1 | MTR_8g032320 | 37.500 | 96 | 58 | 2 | 6 | 99 | 4 | 99 | 1.40e-12 | 62.0 |
| MS.gene02897.t1 | MTR_8g032300 | 37.363 | 91 | 55 | 2 | 6 | 94 | 4 | 94 | 1.10e-11 | 59.7 |
| MS.gene02897.t1 | MTR_6g084400 | 38.053 | 113 | 61 | 5 | 7 | 113 | 484 | 593 | 1.27e-11 | 62.4 |
| MS.gene02897.t1 | MTR_5g079880 | 36.364 | 99 | 57 | 4 | 5 | 97 | 3 | 101 | 2.76e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02897.t1 | AT5G47710 | 69.277 | 166 | 51 | 0 | 1 | 166 | 1 | 166 | 1.55e-84 | 246 |
| MS.gene02897.t1 | AT5G47710 | 69.277 | 166 | 51 | 0 | 1 | 166 | 1 | 166 | 1.55e-84 | 246 |
| MS.gene02897.t1 | AT5G47710 | 69.277 | 166 | 51 | 0 | 1 | 166 | 1 | 166 | 1.55e-84 | 246 |
| MS.gene02897.t1 | AT5G47710 | 69.277 | 166 | 51 | 0 | 1 | 166 | 1 | 166 | 1.55e-84 | 246 |
| MS.gene02897.t1 | AT1G73580 | 45.223 | 157 | 84 | 1 | 1 | 157 | 4 | 158 | 4.00e-40 | 133 |
| MS.gene02897.t1 | AT1G70790 | 45.342 | 161 | 85 | 3 | 1 | 159 | 1 | 160 | 4.88e-40 | 134 |
| MS.gene02897.t1 | AT1G70790 | 45.342 | 161 | 85 | 3 | 1 | 159 | 1 | 160 | 4.88e-40 | 134 |
| MS.gene02897.t1 | AT1G70790 | 45.342 | 161 | 85 | 3 | 1 | 159 | 1 | 160 | 4.88e-40 | 134 |
| MS.gene02897.t1 | AT2G01540 | 44.156 | 154 | 84 | 2 | 5 | 157 | 6 | 158 | 4.87e-38 | 128 |
| MS.gene02897.t1 | AT3G17980 | 42.038 | 157 | 89 | 2 | 1 | 157 | 13 | 167 | 1.03e-37 | 127 |
| MS.gene02897.t1 | AT5G37740 | 40.506 | 158 | 93 | 1 | 1 | 157 | 1 | 158 | 2.36e-37 | 126 |
| MS.gene02897.t1 | AT1G66360 | 38.854 | 157 | 96 | 0 | 1 | 157 | 1 | 157 | 1.57e-36 | 124 |
| MS.gene02897.t1 | AT4G05330 | 43.949 | 157 | 87 | 1 | 1 | 157 | 140 | 295 | 2.21e-36 | 127 |
| MS.gene02897.t1 | AT4G05330 | 43.949 | 157 | 87 | 1 | 1 | 157 | 175 | 330 | 7.21e-36 | 127 |
| MS.gene02897.t1 | AT4G05330 | 43.949 | 157 | 87 | 1 | 1 | 157 | 175 | 330 | 7.21e-36 | 127 |
| MS.gene02897.t1 | AT4G21160 | 42.675 | 157 | 89 | 1 | 1 | 157 | 176 | 331 | 1.01e-35 | 127 |
| MS.gene02897.t1 | AT4G21160 | 42.675 | 157 | 89 | 1 | 1 | 157 | 176 | 331 | 1.01e-35 | 127 |
| MS.gene02897.t1 | AT4G21160 | 42.675 | 157 | 89 | 1 | 1 | 157 | 176 | 331 | 1.01e-35 | 127 |
| MS.gene02897.t1 | AT4G21160 | 42.675 | 157 | 89 | 1 | 1 | 157 | 176 | 331 | 1.01e-35 | 127 |
| MS.gene02897.t1 | AT1G70810 | 40.764 | 157 | 91 | 2 | 1 | 157 | 1 | 155 | 1.19e-35 | 122 |
| MS.gene02897.t1 | AT1G23140 | 37.576 | 165 | 101 | 2 | 1 | 165 | 1 | 163 | 1.54e-34 | 119 |
| MS.gene02897.t1 | AT1G48590 | 39.490 | 157 | 93 | 2 | 1 | 157 | 6 | 160 | 2.72e-34 | 119 |
| MS.gene02897.t1 | AT1G48590 | 39.490 | 157 | 93 | 2 | 1 | 157 | 6 | 160 | 2.72e-34 | 119 |
| MS.gene02897.t1 | AT1G48590 | 39.490 | 157 | 93 | 2 | 1 | 157 | 37 | 191 | 4.93e-34 | 119 |
| MS.gene02897.t1 | AT5G37740 | 38.095 | 168 | 93 | 2 | 1 | 157 | 1 | 168 | 6.98e-34 | 118 |
| MS.gene02897.t1 | AT3G07940 | 44.586 | 157 | 86 | 1 | 1 | 157 | 224 | 379 | 1.50e-33 | 122 |
| MS.gene02897.t1 | AT1G70800 | 36.306 | 157 | 98 | 1 | 1 | 157 | 10 | 164 | 2.92e-31 | 111 |
| MS.gene02897.t1 | AT1G70790 | 42.149 | 121 | 68 | 2 | 40 | 159 | 4 | 123 | 7.03e-27 | 99.4 |
| MS.gene02897.t1 | AT1G48590 | 32.484 | 157 | 72 | 3 | 1 | 157 | 37 | 159 | 1.58e-19 | 80.9 |
| MS.gene02897.t1 | AT1G63220 | 38.889 | 90 | 53 | 2 | 6 | 93 | 4 | 93 | 8.31e-11 | 57.4 |
Find 35 sgRNAs with CRISPR-Local
Find 75 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACCTTTAGTTGCCCTAAT+TGG | 0.297676 | 2.4:+61830518 | None:intergenic |
| CTTCATTCCAAACAGGATTC+AGG | 0.299774 | 2.4:+61829896 | None:intergenic |
| ACCCTCGGGAATTCTCAATT+TGG | 0.308994 | 2.4:-61829851 | MS.gene02897:intron |
| CCTTATGTTGTTCTCAAACT+AGG | 0.330352 | 2.4:-61830445 | MS.gene02897:CDS |
| AGCATAATGAGTGACCAATT+AGG | 0.335455 | 2.4:-61830532 | None:intergenic |
| GCATAATGAGTGACCAATTA+GGG | 0.366299 | 2.4:-61830531 | None:intergenic |
| CTTCCGGTGAGCAAACATTA+AGG | 0.379148 | 2.4:-61829367 | MS.gene02897:CDS |
| TGTTCTCAAACTAGGGAATC+AGG | 0.396033 | 2.4:-61830437 | MS.gene02897:intron |
| ATAGCTGCCTGAATCCTGTT+TGG | 0.398410 | 2.4:-61829903 | MS.gene02897:CDS |
| GCACGGTTGTGCAGAATGTT+TGG | 0.399741 | 2.4:-61829283 | MS.gene02897:CDS |
| AGCAGTATCAATTGTGTTAA+CGG | 0.411045 | 2.4:-61829305 | MS.gene02897:CDS |
| TTCAGCTCTTCATTCCAAAC+AGG | 0.413548 | 2.4:+61829889 | None:intergenic |
| TTGTGCAGAATGTTTGGTTA+AGG | 0.441247 | 2.4:-61829277 | MS.gene02897:CDS |
| AATCTAGCTGCAGAGACTAA+TGG | 0.452322 | 2.4:+61829410 | None:intergenic |
| CTTATGTTGTTCTCAAACTA+GGG | 0.459241 | 2.4:-61830444 | MS.gene02897:CDS |
| CCTAGTTTGAGAACAACATA+AGG | 0.471060 | 2.4:+61830445 | None:intergenic |
| CTGCAGAGACTAATGGTTGA+AGG | 0.477932 | 2.4:+61829417 | None:intergenic |
| GAGTGTCAATTCTATCTCTC+CGG | 0.491542 | 2.4:+61829238 | None:intergenic |
| TTTGAAAGCTGATGACAAGA+TGG | 0.495191 | 2.4:-61829456 | MS.gene02897:CDS |
| GATCGCTGGTCTTGAAATCT+CGG | 0.506401 | 2.4:+61830467 | None:intergenic |
| TTGAAAGCTGATGACAAGAT+GGG | 0.520635 | 2.4:-61829455 | MS.gene02897:CDS |
| TCATAGTTGTGCAAGGGAAA+AGG | 0.522477 | 2.4:-61830498 | MS.gene02897:CDS |
| CTTCCTTAATGTTTGCTCAC+CGG | 0.528914 | 2.4:+61829364 | None:intergenic |
| TTTCACTTTGACAGAACCCT+CGG | 0.539049 | 2.4:-61829866 | MS.gene02897:CDS |
| AGGCTTCGCGAAGTAGAATC+CGG | 0.566418 | 2.4:-61829257 | MS.gene02897:CDS |
| GAGAACAACATAAGGATCGC+TGG | 0.570782 | 2.4:+61830453 | None:intergenic |
| TGACCAATTAGGGCAACTAA+AGG | 0.571901 | 2.4:-61830521 | MS.gene02897:CDS |
| CTAAAGGTCATAGTTGTGCA+AGG | 0.584222 | 2.4:-61830505 | MS.gene02897:CDS |
| CGGTGAGCAAACATTAAGGA+AGG | 0.588349 | 2.4:-61829363 | MS.gene02897:CDS |
| TTCACTTTGACAGAACCCTC+GGG | 0.609431 | 2.4:-61829865 | MS.gene02897:CDS |
| TAAAGGTCATAGTTGTGCAA+GGG | 0.611606 | 2.4:-61830504 | MS.gene02897:CDS |
| CACCAAATTGAGAATTCCCG+AGG | 0.612418 | 2.4:+61829849 | None:intergenic |
| TATCAATTGTGTTAACGGCA+CGG | 0.623235 | 2.4:-61829300 | MS.gene02897:CDS |
| AGTTGTGCAAGGGAAAAGGT+TGG | 0.639430 | 2.4:-61830494 | MS.gene02897:CDS |
| ACCAAATTGAGAATTCCCGA+GGG | 0.673124 | 2.4:+61829850 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATACTACTAAATAATGTTAA+GGG | + | chr2.4:61829739-61829758 | None:intergenic | 15.0% |
| !! | TATACTACTAAATAATGTTA+AGG | + | chr2.4:61829740-61829759 | None:intergenic | 15.0% |
| ! | ATGCATCTTCAAAGTTTATT+TGG | + | chr2.4:61829702-61829721 | None:intergenic | 25.0% |
| ! | CTTATTTGAGCTTATCTAAT+AGG | - | chr2.4:61830030-61830049 | MS.gene02897:intron | 25.0% |
| ! | GTTTCATATTCATCTTTAGT+TGG | - | chr2.4:61829332-61829351 | MS.gene02897:CDS | 25.0% |
| ! | TATGTTATATGCGCTTAATT+AGG | - | chr2.4:61830179-61830198 | MS.gene02897:intron | 25.0% |
| ! | TTTGACATTAAGGACATATT+TGG | - | chr2.4:61829504-61829523 | MS.gene02897:intron | 25.0% |
| !! | AATTTCTGAAAAACACTTGT+GGG | - | chr2.4:61829610-61829629 | MS.gene02897:intron | 25.0% |
| !! | CTATTTTCTTAAGCTATTAC+CGG | + | chr2.4:61829405-61829424 | None:intergenic | 25.0% |
| !! | TAATTTCTGAAAAACACTTG+TGG | - | chr2.4:61829609-61829628 | MS.gene02897:intron | 25.0% |
| !!! | ATTAGGTTTTTTATCTGAAG+AGG | - | chr2.4:61830196-61830215 | MS.gene02897:intron | 25.0% |
| !!! | CTAAACTGTTTTTGACATTA+AGG | - | chr2.4:61829494-61829513 | MS.gene02897:intron | 25.0% |
| !!! | TTAGGTTTTTTATCTGAAGA+GGG | - | chr2.4:61830197-61830216 | MS.gene02897:intron | 25.0% |
| AAAATCAGACATATAGACAC+CGG | - | chr2.4:61829383-61829402 | MS.gene02897:CDS | 30.0% | |
| AGCAGTATCAATTGTGTTAA+CGG | - | chr2.4:61830426-61830445 | MS.gene02897:intron | 30.0% | |
| CTTATGTTGTTCTCAAACTA+GGG | - | chr2.4:61829287-61829306 | MS.gene02897:CDS | 30.0% | |
| GTATATAGGACTGTTTAGAA+TGG | - | chr2.4:61830007-61830026 | MS.gene02897:intron | 30.0% | |
| TGCAACTCAGTTATAAATGA+AGG | + | chr2.4:61830223-61830242 | None:intergenic | 30.0% | |
| TTCTATAGCAAAAGCTATCA+TGG | + | chr2.4:61830124-61830143 | None:intergenic | 30.0% | |
| ! | ATTTTGCGTTAGTGTTTCAT+AGG | + | chr2.4:61829368-61829387 | None:intergenic | 30.0% |
| ! | CTGAGTTGCATTTTGAATAT+AGG | - | chr2.4:61830233-61830252 | MS.gene02897:intron | 30.0% |
| ! | GAGTTTACTCATATTTTGCT+TGG | - | chr2.4:61829904-61829923 | MS.gene02897:CDS | 30.0% |
| ! | GATTATCGAATGAGCTATTT+TGG | - | chr2.4:61829546-61829565 | MS.gene02897:intron | 30.0% |
| ! | TACAAGACAATTTTCAGAGT+CGG | + | chr2.4:61830400-61830419 | None:intergenic | 30.0% |
| ! | TTACTCATATTTTGCTTGGA+AGG | - | chr2.4:61829908-61829927 | MS.gene02897:CDS | 30.0% |
| !! | TTATGATCAGAAGCTGTTTT+TGG | - | chr2.4:61829582-61829601 | MS.gene02897:intron | 30.0% |
| AAGATGCATGCTCTTTCTAA+TGG | - | chr2.4:61829713-61829732 | MS.gene02897:intron | 35.0% | |
| CCTAGTTTGAGAACAACATA+AGG | + | chr2.4:61829289-61829308 | None:intergenic | 35.0% | |
| CCTTATGTTGTTCTCAAACT+AGG | - | chr2.4:61829286-61829305 | MS.gene02897:CDS | 35.0% | |
| GTACTCTACATGCTGTATAT+AGG | - | chr2.4:61829993-61830012 | MS.gene02897:intron | 35.0% | |
| TAAAGGTCATAGTTGTGCAA+GGG | - | chr2.4:61829227-61829246 | MS.gene02897:CDS | 35.0% | |
| TATCAATTGTGTTAACGGCA+CGG | - | chr2.4:61830431-61830450 | MS.gene02897:intron | 35.0% | |
| TTGAAAGCTGATGACAAGAT+GGG | - | chr2.4:61830276-61830295 | MS.gene02897:intron | 35.0% | |
| TTGAATGTAACCACATGTGT+CGG | - | chr2.4:61829431-61829450 | MS.gene02897:CDS | 35.0% | |
| TTGAGCTTATCTAATAGGCT+TGG | - | chr2.4:61830035-61830054 | MS.gene02897:intron | 35.0% | |
| TTGTGCAGAATGTTTGGTTA+AGG | - | chr2.4:61830454-61830473 | MS.gene02897:CDS | 35.0% | |
| TTTGAAAGCTGATGACAAGA+TGG | - | chr2.4:61830275-61830294 | MS.gene02897:intron | 35.0% | |
| ! | ACAAGACAATTTTCAGAGTC+GGG | + | chr2.4:61830399-61830418 | None:intergenic | 35.0% |
| ! | CTAGGTGATGTATTTTACTG+TGG | - | chr2.4:61829935-61829954 | MS.gene02897:intron | 35.0% |
| !! | GACATTTTAAGAGTCTCTTC+CGG | - | chr2.4:61830348-61830367 | MS.gene02897:intron | 35.0% |
| AATCTAGCTGCAGAGACTAA+TGG | + | chr2.4:61830324-61830343 | None:intergenic | 40.0% | |
| ACCAAATTGAGAATTCCCGA+GGG | + | chr2.4:61829884-61829903 | None:intergenic | 40.0% | |
| ACGCCTTCAATATGAAGTGT+CGG | - | chr2.4:61829469-61829488 | MS.gene02897:CDS | 40.0% | |
| CAATGCGCTATATATTAGCC+TGG | - | chr2.4:61829967-61829986 | MS.gene02897:intron | 40.0% | |
| CTAAAGGTCATAGTTGTGCA+AGG | - | chr2.4:61829226-61829245 | MS.gene02897:CDS | 40.0% | |
| CTTCATTCCAAACAGGATTC+AGG | + | chr2.4:61829838-61829857 | None:intergenic | 40.0% | |
| CTTCCTTAATGTTTGCTCAC+CGG | + | chr2.4:61830370-61830389 | None:intergenic | 40.0% | |
| GAGTGTCAATTCTATCTCTC+CGG | + | chr2.4:61830496-61830515 | None:intergenic | 40.0% | |
| TCATAGTTGTGCAAGGGAAA+AGG | - | chr2.4:61829233-61829252 | MS.gene02897:CDS | 40.0% | |
| TGACCAATTAGGGCAACTAA+AGG | - | chr2.4:61829210-61829229 | MS.gene02897:CDS | 40.0% | |
| TGACCTTTAGTTGCCCTAAT+TGG | + | chr2.4:61829216-61829235 | None:intergenic | 40.0% | |
| TGTTCTCAAACTAGGGAATC+AGG | - | chr2.4:61829294-61829313 | MS.gene02897:CDS | 40.0% | |
| TTCAGCTCTTCATTCCAAAC+AGG | + | chr2.4:61829845-61829864 | None:intergenic | 40.0% | |
| TTTCACTTTGACAGAACCCT+CGG | - | chr2.4:61829865-61829884 | MS.gene02897:CDS | 40.0% | |
| ! | GTACCGACACTTCATATTGA+AGG | + | chr2.4:61829475-61829494 | None:intergenic | 40.0% |
| !! | TCGAATGAGCTATTTTGGAG+AGG | - | chr2.4:61829551-61829570 | MS.gene02897:intron | 40.0% |
| !!! | TTTTGAAGTAGCAACAGGTG+TGG | + | chr2.4:61830526-61830545 | None:intergenic | 40.0% |
| !!! | TTTTGCTTGGAAGGTACTCT+AGG | - | chr2.4:61829917-61829936 | MS.gene02897:CDS | 40.0% |
| ACCCTCGGGAATTCTCAATT+TGG | - | chr2.4:61829880-61829899 | MS.gene02897:CDS | 45.0% | |
| AGTTGTGCAAGGGAAAAGGT+TGG | - | chr2.4:61829237-61829256 | MS.gene02897:CDS | 45.0% | |
| ATAGCTGCCTGAATCCTGTT+TGG | - | chr2.4:61829828-61829847 | MS.gene02897:intron | 45.0% | |
| CACCAAATTGAGAATTCCCG+AGG | + | chr2.4:61829885-61829904 | None:intergenic | 45.0% | |
| CGGTGAGCAAACATTAAGGA+AGG | - | chr2.4:61830368-61830387 | MS.gene02897:intron | 45.0% | |
| CTGCAGAGACTAATGGTTGA+AGG | + | chr2.4:61830317-61830336 | None:intergenic | 45.0% | |
| CTTCCGGTGAGCAAACATTA+AGG | - | chr2.4:61830364-61830383 | MS.gene02897:intron | 45.0% | |
| GAGAACAACATAAGGATCGC+TGG | + | chr2.4:61829281-61829300 | None:intergenic | 45.0% | |
| TTCACTTTGACAGAACCCTC+GGG | - | chr2.4:61829866-61829885 | MS.gene02897:CDS | 45.0% | |
| ! | CTTCATATTGAAGGCGTGTC+TGG | + | chr2.4:61829466-61829485 | None:intergenic | 45.0% |
| ! | GCGCTATATATTAGCCTGGA+AGG | - | chr2.4:61829971-61829990 | MS.gene02897:intron | 45.0% |
| ! | GTTTTCAACACCGACACATG+TGG | + | chr2.4:61829444-61829463 | None:intergenic | 45.0% |
| !! | GATCGCTGGTCTTGAAATCT+CGG | + | chr2.4:61829267-61829286 | None:intergenic | 45.0% |
| AGGCTTCGCGAAGTAGAATC+CGG | - | chr2.4:61830474-61830493 | MS.gene02897:CDS | 50.0% | |
| GCACGGTTGTGCAGAATGTT+TGG | - | chr2.4:61830448-61830467 | MS.gene02897:CDS | 50.0% | |
| TGACTTTCGTCTTCGCAGTC+TGG | + | chr2.4:61829805-61829824 | None:intergenic | 50.0% | |
| ! | CAGCATGTAGAGTACCTTCC+AGG | + | chr2.4:61829988-61830007 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 61829205 | 61830548 | 61829205 | ID=MS.gene02897 |
| chr2.4 | mRNA | 61829205 | 61830548 | 61829205 | ID=MS.gene02897.t1;Parent=MS.gene02897 |
| chr2.4 | exon | 61830438 | 61830548 | 61830438 | ID=MS.gene02897.t1.exon1;Parent=MS.gene02897.t1 |
| chr2.4 | CDS | 61830438 | 61830548 | 61830438 | ID=cds.MS.gene02897.t1;Parent=MS.gene02897.t1 |
| chr2.4 | exon | 61829852 | 61829947 | 61829852 | ID=MS.gene02897.t1.exon2;Parent=MS.gene02897.t1 |
| chr2.4 | CDS | 61829852 | 61829947 | 61829852 | ID=cds.MS.gene02897.t1;Parent=MS.gene02897.t1 |
| chr2.4 | exon | 61829205 | 61829498 | 61829205 | ID=MS.gene02897.t1.exon3;Parent=MS.gene02897.t1 |
| chr2.4 | CDS | 61829205 | 61829498 | 61829205 | ID=cds.MS.gene02897.t1;Parent=MS.gene02897.t1 |
| Gene Sequence |
| Protein sequence |
