Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene029318.t1 | XP_013470285.1 | 95 | 382 | 15 | 1 | 1 | 378 | 1 | 382 | 8.40E-222 | 779.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene029318.t1 | Q940H3 | 64.9 | 348 | 114 | 4 | 33 | 376 | 29 | 372 | 2.8e-141 | 503.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene029318.t1 | A0A072VSC4 | 95.0 | 382 | 15 | 1 | 1 | 378 | 1 | 382 | 6.1e-222 | 779.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene029318 | MS.gene82618 | PPI |
MS.gene027587 | MS.gene029318 | PPI |
MS.gene027586 | MS.gene029318 | PPI |
MS.gene22010 | MS.gene029318 | PPI |
MS.gene070181 | MS.gene029318 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene029318.t1 | MTR_1g112210 | 95.026 | 382 | 15 | 1 | 1 | 378 | 1 | 382 | 0.0 | 764 |
MS.gene029318.t1 | MTR_1g112210 | 92.778 | 360 | 13 | 1 | 19 | 378 | 23 | 369 | 0.0 | 701 |
MS.gene029318.t1 | MTR_1g050448 | 73.351 | 379 | 96 | 3 | 1 | 378 | 1 | 375 | 0.0 | 602 |
MS.gene029318.t1 | MTR_3g464570 | 42.216 | 334 | 175 | 5 | 55 | 374 | 43 | 372 | 6.99e-99 | 298 |
MS.gene029318.t1 | MTR_5g071350 | 40.233 | 343 | 181 | 5 | 53 | 374 | 56 | 395 | 1.56e-98 | 298 |
MS.gene029318.t1 | MTR_2g015720 | 42.296 | 331 | 170 | 6 | 55 | 378 | 42 | 358 | 1.81e-95 | 289 |
MS.gene029318.t1 | MTR_4g016940 | 42.075 | 347 | 177 | 8 | 53 | 378 | 84 | 427 | 1.76e-92 | 284 |
MS.gene029318.t1 | MTR_3g049330 | 42.216 | 334 | 169 | 7 | 55 | 378 | 31 | 350 | 4.33e-92 | 280 |
MS.gene029318.t1 | MTR_2g091175 | 39.458 | 332 | 180 | 6 | 54 | 378 | 49 | 366 | 1.49e-91 | 280 |
MS.gene029318.t1 | MTR_7g093450 | 38.947 | 380 | 208 | 8 | 19 | 378 | 212 | 587 | 1.39e-89 | 281 |
MS.gene029318.t1 | MTR_2g073500 | 42.687 | 335 | 167 | 8 | 53 | 378 | 27 | 345 | 3.05e-89 | 273 |
MS.gene029318.t1 | MTR_0136s0010 | 41.210 | 347 | 184 | 7 | 50 | 378 | 165 | 509 | 4.87e-88 | 275 |
MS.gene029318.t1 | MTR_2g073510 | 39.339 | 333 | 181 | 6 | 51 | 374 | 29 | 349 | 2.53e-87 | 268 |
MS.gene029318.t1 | MTR_5g034810 | 40.719 | 334 | 176 | 7 | 53 | 378 | 33 | 352 | 1.21e-86 | 266 |
MS.gene029318.t1 | MTR_5g033800 | 36.842 | 380 | 216 | 10 | 15 | 378 | 112 | 483 | 4.55e-85 | 267 |
MS.gene029318.t1 | MTR_7g109550 | 37.015 | 335 | 188 | 5 | 55 | 374 | 137 | 463 | 7.96e-85 | 265 |
MS.gene029318.t1 | MTR_4g079700 | 37.725 | 334 | 181 | 8 | 55 | 378 | 47 | 363 | 9.07e-85 | 262 |
MS.gene029318.t1 | MTR_7g068920 | 40.058 | 347 | 184 | 8 | 53 | 378 | 78 | 421 | 1.25e-84 | 263 |
MS.gene029318.t1 | MTR_5g059400 | 37.662 | 385 | 215 | 8 | 17 | 378 | 133 | 515 | 2.83e-84 | 266 |
MS.gene029318.t1 | MTR_1g116130 | 37.662 | 385 | 215 | 8 | 17 | 378 | 133 | 515 | 2.83e-84 | 266 |
MS.gene029318.t1 | MTR_3g070900 | 40.517 | 348 | 171 | 10 | 55 | 374 | 106 | 445 | 8.12e-83 | 259 |
MS.gene029318.t1 | MTR_8g463790 | 39.595 | 346 | 180 | 10 | 55 | 378 | 71 | 409 | 2.12e-82 | 258 |
MS.gene029318.t1 | MTR_4g087730 | 37.234 | 376 | 206 | 10 | 12 | 378 | 8 | 362 | 2.47e-82 | 256 |
MS.gene029318.t1 | MTR_4g088030 | 35.756 | 344 | 201 | 6 | 42 | 378 | 20 | 350 | 6.36e-82 | 254 |
MS.gene029318.t1 | MTR_4g014440 | 35.294 | 391 | 223 | 11 | 10 | 378 | 25 | 407 | 1.68e-81 | 255 |
MS.gene029318.t1 | MTR_4g126950 | 34.896 | 384 | 220 | 8 | 21 | 378 | 67 | 446 | 5.42e-81 | 255 |
MS.gene029318.t1 | MTR_5g082880 | 40.227 | 353 | 172 | 11 | 53 | 374 | 163 | 507 | 8.50e-80 | 254 |
MS.gene029318.t1 | MTR_3g021090 | 35.127 | 353 | 206 | 7 | 30 | 374 | 7 | 344 | 9.70e-79 | 248 |
MS.gene029318.t1 | MTR_3g035830 | 35.211 | 355 | 207 | 7 | 30 | 376 | 7 | 346 | 1.48e-78 | 245 |
MS.gene029318.t1 | MTR_3g071650 | 35.969 | 392 | 222 | 10 | 14 | 378 | 41 | 430 | 4.26e-78 | 247 |
MS.gene029318.t1 | MTR_1g111010 | 40.361 | 332 | 172 | 12 | 53 | 378 | 30 | 341 | 5.71e-78 | 244 |
MS.gene029318.t1 | MTR_4g121560 | 36.413 | 368 | 209 | 8 | 31 | 378 | 91 | 453 | 9.70e-78 | 247 |
MS.gene029318.t1 | MTR_3g021060 | 34.473 | 351 | 197 | 7 | 34 | 376 | 36 | 361 | 4.84e-76 | 239 |
MS.gene029318.t1 | MTR_5g083260 | 37.971 | 345 | 190 | 9 | 55 | 378 | 83 | 424 | 7.17e-76 | 241 |
MS.gene029318.t1 | MTR_8g069790 | 35.988 | 339 | 200 | 7 | 52 | 374 | 175 | 512 | 3.44e-75 | 242 |
MS.gene029318.t1 | MTR_3g464570 | 41.111 | 270 | 142 | 4 | 118 | 374 | 3 | 268 | 6.89e-74 | 231 |
MS.gene029318.t1 | MTR_7g070060 | 34.870 | 347 | 204 | 9 | 54 | 378 | 63 | 409 | 9.53e-74 | 235 |
MS.gene029318.t1 | MTR_4g014430 | 35.244 | 349 | 207 | 7 | 47 | 378 | 100 | 446 | 8.83e-73 | 234 |
MS.gene029318.t1 | MTR_1g058380 | 34.243 | 403 | 231 | 10 | 1 | 378 | 1 | 394 | 2.25e-71 | 229 |
MS.gene029318.t1 | MTR_7g094750 | 35.260 | 346 | 198 | 8 | 55 | 378 | 91 | 432 | 4.77e-67 | 219 |
MS.gene029318.t1 | MTR_2g022560 | 34.232 | 371 | 206 | 9 | 32 | 376 | 77 | 435 | 9.39e-67 | 218 |
MS.gene029318.t1 | MTR_3g090120 | 35.638 | 376 | 204 | 9 | 25 | 378 | 100 | 459 | 2.18e-63 | 210 |
MS.gene029318.t1 | MTR_8g093530 | 33.724 | 341 | 199 | 6 | 53 | 378 | 88 | 416 | 1.23e-61 | 204 |
MS.gene029318.t1 | MTR_5g033800 | 37.262 | 263 | 148 | 6 | 28 | 279 | 124 | 380 | 8.82e-58 | 192 |
MS.gene029318.t1 | MTR_7g070060 | 37.021 | 235 | 139 | 5 | 54 | 279 | 63 | 297 | 6.02e-54 | 181 |
MS.gene029318.t1 | MTR_7g070060 | 31.741 | 293 | 180 | 7 | 106 | 378 | 15 | 307 | 6.59e-51 | 172 |
MS.gene029318.t1 | MTR_7g094750 | 34.454 | 238 | 143 | 3 | 55 | 279 | 91 | 328 | 3.44e-48 | 166 |
MS.gene029318.t1 | MTR_6g061710 | 29.459 | 370 | 215 | 12 | 40 | 374 | 152 | 510 | 2.64e-44 | 160 |
MS.gene029318.t1 | MTR_1g076690 | 30.110 | 362 | 193 | 15 | 55 | 374 | 223 | 566 | 2.46e-40 | 150 |
MS.gene029318.t1 | MTR_5g069320 | 30.466 | 279 | 152 | 6 | 98 | 371 | 145 | 386 | 1.88e-39 | 144 |
MS.gene029318.t1 | MTR_8g027900 | 27.596 | 366 | 224 | 13 | 40 | 374 | 196 | 551 | 6.87e-36 | 138 |
MS.gene029318.t1 | MTR_8g093870 | 28.451 | 355 | 208 | 15 | 53 | 376 | 131 | 470 | 8.00e-36 | 136 |
MS.gene029318.t1 | MTR_7g019120 | 29.745 | 353 | 208 | 12 | 51 | 374 | 75 | 416 | 3.04e-35 | 134 |
MS.gene029318.t1 | MTR_5g035090 | 27.596 | 366 | 212 | 13 | 46 | 374 | 74 | 423 | 4.49e-35 | 134 |
MS.gene029318.t1 | MTR_7g033230 | 28.611 | 360 | 203 | 13 | 53 | 374 | 262 | 605 | 8.98e-35 | 135 |
MS.gene029318.t1 | MTR_8g099300 | 27.020 | 396 | 246 | 14 | 11 | 374 | 31 | 415 | 9.16e-35 | 132 |
MS.gene029318.t1 | MTR_7g033230 | 28.611 | 360 | 203 | 13 | 53 | 374 | 332 | 675 | 2.24e-34 | 134 |
MS.gene029318.t1 | MTR_3g109840 | 28.169 | 355 | 204 | 13 | 55 | 374 | 73 | 411 | 1.50e-33 | 129 |
MS.gene029318.t1 | MTR_8g104970 | 27.869 | 366 | 212 | 15 | 46 | 374 | 111 | 461 | 1.84e-33 | 130 |
MS.gene029318.t1 | MTR_4g092830 | 27.920 | 351 | 214 | 11 | 55 | 375 | 48 | 389 | 5.91e-33 | 128 |
MS.gene029318.t1 | MTR_6g007777 | 27.901 | 362 | 207 | 15 | 53 | 378 | 114 | 457 | 7.29e-33 | 128 |
MS.gene029318.t1 | MTR_6g016880 | 25.735 | 408 | 254 | 12 | 7 | 374 | 17 | 415 | 7.82e-33 | 127 |
MS.gene029318.t1 | MTR_5g035150 | 26.776 | 366 | 209 | 13 | 50 | 374 | 80 | 427 | 3.72e-32 | 125 |
MS.gene029318.t1 | MTR_2g016060 | 28.652 | 356 | 196 | 13 | 59 | 374 | 59 | 396 | 1.22e-31 | 124 |
MS.gene029318.t1 | MTR_5g035080 | 27.451 | 357 | 207 | 13 | 55 | 374 | 75 | 416 | 7.64e-31 | 122 |
MS.gene029318.t1 | MTR_4g125060 | 27.933 | 358 | 212 | 15 | 52 | 378 | 168 | 510 | 9.29e-31 | 123 |
MS.gene029318.t1 | MTR_4g125060 | 27.642 | 369 | 215 | 16 | 45 | 376 | 116 | 469 | 9.33e-31 | 122 |
MS.gene029318.t1 | MTR_4g125060 | 27.933 | 358 | 212 | 15 | 52 | 378 | 197 | 539 | 1.18e-30 | 123 |
MS.gene029318.t1 | MTR_5g035070 | 29.944 | 354 | 203 | 13 | 55 | 374 | 87 | 429 | 1.59e-30 | 121 |
MS.gene029318.t1 | MTR_6g016875 | 27.042 | 355 | 214 | 10 | 53 | 374 | 62 | 404 | 2.60e-29 | 117 |
MS.gene029318.t1 | MTR_6g016240 | 26.764 | 411 | 237 | 16 | 8 | 374 | 22 | 412 | 1.38e-25 | 107 |
MS.gene029318.t1 | MTR_7g019140 | 46.875 | 96 | 50 | 1 | 51 | 145 | 75 | 170 | 1.43e-23 | 96.7 |
MS.gene029318.t1 | MTR_5g035120 | 39.216 | 102 | 61 | 1 | 44 | 144 | 64 | 165 | 8.82e-20 | 86.3 |
MS.gene029318.t1 | MTR_3g021150 | 33.645 | 107 | 64 | 2 | 240 | 339 | 1 | 107 | 2.34e-16 | 75.1 |
MS.gene029318.t1 | MTR_2g022580 | 35.593 | 118 | 64 | 3 | 115 | 220 | 3 | 120 | 1.47e-15 | 73.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene029318.t1 | AT3G54260 | 61.478 | 379 | 132 | 6 | 2 | 376 | 4 | 372 | 1.30e-172 | 486 |
MS.gene029318.t1 | AT5G58600 | 40.237 | 338 | 185 | 6 | 55 | 378 | 66 | 400 | 1.11e-92 | 283 |
MS.gene029318.t1 | AT2G31110 | 38.462 | 364 | 198 | 7 | 21 | 374 | 11 | 358 | 6.88e-92 | 280 |
MS.gene029318.t1 | AT1G29050 | 41.088 | 331 | 175 | 5 | 55 | 378 | 61 | 378 | 1.59e-91 | 280 |
MS.gene029318.t1 | AT2G30900 | 40.841 | 333 | 174 | 8 | 53 | 374 | 41 | 361 | 1.45e-89 | 274 |
MS.gene029318.t1 | AT2G34070 | 39.823 | 339 | 181 | 7 | 49 | 378 | 59 | 383 | 1.47e-89 | 275 |
MS.gene029318.t1 | AT5G01360 | 38.329 | 347 | 191 | 8 | 53 | 378 | 34 | 378 | 5.04e-86 | 266 |
MS.gene029318.t1 | AT3G62390 | 38.576 | 337 | 187 | 6 | 53 | 374 | 136 | 467 | 2.08e-85 | 267 |
MS.gene029318.t1 | AT5G01360 | 38.329 | 347 | 191 | 8 | 53 | 378 | 90 | 434 | 2.25e-85 | 266 |
MS.gene029318.t1 | AT2G30010 | 40.058 | 347 | 179 | 8 | 55 | 378 | 56 | 396 | 3.30e-85 | 264 |
MS.gene029318.t1 | AT5G06700 | 37.978 | 366 | 202 | 7 | 37 | 378 | 230 | 594 | 4.62e-85 | 270 |
MS.gene029318.t1 | AT2G30010 | 40.058 | 347 | 179 | 8 | 55 | 378 | 99 | 439 | 5.90e-85 | 265 |
MS.gene029318.t1 | AT2G42570 | 38.507 | 335 | 180 | 7 | 54 | 378 | 46 | 364 | 1.53e-83 | 259 |
MS.gene029318.t1 | AT1G78710 | 38.298 | 329 | 182 | 7 | 54 | 374 | 37 | 352 | 1.82e-83 | 258 |
MS.gene029318.t1 | AT1G73140 | 38.728 | 346 | 187 | 8 | 53 | 378 | 65 | 405 | 3.77e-83 | 259 |
MS.gene029318.t1 | AT3G12060 | 39.080 | 348 | 190 | 8 | 50 | 378 | 191 | 535 | 8.30e-83 | 263 |
MS.gene029318.t1 | AT3G55990 | 37.669 | 369 | 200 | 9 | 28 | 374 | 119 | 479 | 5.72e-82 | 259 |
MS.gene029318.t1 | AT2G40150 | 38.636 | 352 | 180 | 9 | 54 | 374 | 70 | 416 | 2.57e-81 | 255 |
MS.gene029318.t1 | AT5G20590 | 38.663 | 344 | 190 | 8 | 53 | 378 | 139 | 479 | 5.43e-81 | 256 |
MS.gene029318.t1 | AT5G49340 | 37.571 | 354 | 199 | 8 | 45 | 378 | 90 | 441 | 3.96e-80 | 253 |
MS.gene029318.t1 | AT1G60790 | 36.416 | 346 | 199 | 9 | 49 | 374 | 184 | 528 | 2.99e-79 | 253 |
MS.gene029318.t1 | AT3G14850 | 37.273 | 330 | 184 | 7 | 55 | 374 | 34 | 350 | 4.87e-79 | 247 |
MS.gene029318.t1 | AT5G01620 | 37.101 | 345 | 195 | 8 | 53 | 378 | 108 | 449 | 1.07e-78 | 249 |
MS.gene029318.t1 | AT5G01620 | 37.101 | 345 | 195 | 8 | 53 | 378 | 108 | 449 | 1.07e-78 | 249 |
MS.gene029318.t1 | AT5G01620 | 37.101 | 345 | 195 | 8 | 53 | 378 | 116 | 457 | 1.09e-78 | 249 |
MS.gene029318.t1 | AT2G40160 | 37.176 | 347 | 195 | 9 | 55 | 378 | 77 | 423 | 3.65e-78 | 247 |
MS.gene029318.t1 | AT2G40160 | 36.888 | 347 | 196 | 9 | 55 | 378 | 77 | 423 | 4.59e-78 | 247 |
MS.gene029318.t1 | AT3G11030 | 37.609 | 343 | 195 | 7 | 55 | 378 | 106 | 448 | 1.45e-76 | 244 |
MS.gene029318.t1 | AT2G38320 | 32.161 | 398 | 243 | 10 | 3 | 378 | 12 | 404 | 1.43e-74 | 237 |
MS.gene029318.t1 | AT2G40320 | 34.343 | 396 | 235 | 9 | 8 | 378 | 27 | 422 | 9.25e-74 | 236 |
MS.gene029318.t1 | AT1G48880 | 35.345 | 348 | 180 | 8 | 54 | 378 | 114 | 439 | 1.29e-67 | 220 |
MS.gene029318.t1 | AT5G19160 | 34.133 | 375 | 209 | 9 | 33 | 376 | 75 | 442 | 1.75e-66 | 218 |
MS.gene029318.t1 | AT2G31110 | 38.583 | 254 | 153 | 3 | 20 | 272 | 10 | 261 | 1.80e-66 | 212 |
MS.gene029318.t1 | AT5G58600 | 41.410 | 227 | 130 | 3 | 55 | 279 | 66 | 291 | 3.54e-65 | 209 |
MS.gene029318.t1 | AT3G62390 | 41.176 | 238 | 129 | 3 | 53 | 279 | 136 | 373 | 4.25e-65 | 213 |
MS.gene029318.t1 | AT3G06080 | 35.028 | 354 | 195 | 9 | 50 | 376 | 98 | 443 | 8.76e-65 | 213 |
MS.gene029318.t1 | AT2G38320 | 33.645 | 321 | 193 | 7 | 78 | 378 | 1 | 321 | 1.12e-64 | 209 |
MS.gene029318.t1 | AT2G30900 | 42.609 | 230 | 127 | 5 | 53 | 279 | 41 | 268 | 1.55e-64 | 207 |
MS.gene029318.t1 | AT5G06230 | 34.561 | 353 | 197 | 8 | 53 | 378 | 19 | 364 | 1.24e-62 | 205 |
MS.gene029318.t1 | AT2G34070 | 38.783 | 263 | 139 | 6 | 124 | 378 | 1 | 249 | 2.86e-62 | 200 |
MS.gene029318.t1 | AT5G06230 | 34.561 | 353 | 197 | 8 | 53 | 378 | 60 | 405 | 3.16e-62 | 205 |
MS.gene029318.t1 | AT3G11570 | 32.071 | 396 | 230 | 11 | 8 | 378 | 38 | 419 | 5.10e-61 | 202 |
MS.gene029318.t1 | AT2G40160 | 39.407 | 236 | 132 | 6 | 55 | 279 | 77 | 312 | 1.24e-56 | 188 |
MS.gene029318.t1 | AT1G78710 | 31.549 | 355 | 176 | 10 | 30 | 378 | 3 | 296 | 9.18e-56 | 185 |
MS.gene029318.t1 | AT5G20590 | 38.750 | 240 | 134 | 5 | 53 | 279 | 139 | 378 | 6.84e-54 | 182 |
MS.gene029318.t1 | AT5G19160 | 37.037 | 243 | 140 | 4 | 50 | 279 | 94 | 336 | 1.83e-50 | 173 |
MS.gene029318.t1 | AT3G14850 | 35.000 | 260 | 147 | 6 | 124 | 374 | 1 | 247 | 8.61e-50 | 168 |
MS.gene029318.t1 | AT3G06080 | 35.802 | 243 | 143 | 4 | 50 | 279 | 98 | 340 | 1.21e-48 | 168 |
MS.gene029318.t1 | AT2G31110 | 39.908 | 218 | 106 | 6 | 166 | 374 | 9 | 210 | 2.35e-48 | 163 |
MS.gene029318.t1 | AT5G06230 | 34.959 | 246 | 141 | 4 | 53 | 279 | 60 | 305 | 1.38e-45 | 159 |
MS.gene029318.t1 | AT1G70230 | 30.447 | 358 | 190 | 14 | 55 | 378 | 79 | 411 | 1.36e-40 | 148 |
MS.gene029318.t1 | AT4G25360 | 29.096 | 354 | 211 | 12 | 54 | 374 | 174 | 520 | 2.88e-39 | 147 |
MS.gene029318.t1 | AT4G25360 | 29.096 | 354 | 211 | 12 | 54 | 374 | 174 | 520 | 2.88e-39 | 147 |
MS.gene029318.t1 | AT5G51640 | 28.912 | 377 | 223 | 13 | 31 | 374 | 120 | 484 | 1.54e-38 | 144 |
MS.gene029318.t1 | AT1G01430 | 26.216 | 370 | 237 | 12 | 35 | 374 | 80 | 443 | 3.23e-38 | 142 |
MS.gene029318.t1 | AT5G64020 | 27.606 | 355 | 219 | 15 | 55 | 376 | 57 | 406 | 4.30e-37 | 139 |
MS.gene029318.t1 | AT4G01080 | 28.693 | 352 | 211 | 12 | 51 | 374 | 87 | 426 | 5.78e-37 | 139 |
MS.gene029318.t1 | AT3G28150 | 28.713 | 404 | 215 | 18 | 12 | 376 | 39 | 408 | 1.87e-34 | 132 |
MS.gene029318.t1 | AT5G20680 | 28.205 | 390 | 221 | 16 | 26 | 378 | 90 | 457 | 2.03e-34 | 132 |
MS.gene029318.t1 | AT5G20680 | 28.205 | 390 | 221 | 16 | 26 | 378 | 184 | 551 | 4.52e-34 | 132 |
MS.gene029318.t1 | AT5G20680 | 28.205 | 390 | 221 | 16 | 26 | 378 | 184 | 551 | 4.52e-34 | 132 |
MS.gene029318.t1 | AT5G20680 | 28.205 | 390 | 221 | 16 | 26 | 378 | 184 | 551 | 4.52e-34 | 132 |
MS.gene029318.t1 | AT5G20680 | 28.205 | 390 | 221 | 16 | 26 | 378 | 184 | 551 | 4.52e-34 | 132 |
MS.gene029318.t1 | AT5G20680 | 28.205 | 390 | 221 | 16 | 26 | 378 | 166 | 533 | 5.06e-34 | 132 |
MS.gene029318.t1 | AT2G37720 | 28.125 | 352 | 217 | 15 | 53 | 378 | 141 | 482 | 9.30e-34 | 131 |
MS.gene029318.t1 | AT5G15890 | 27.841 | 352 | 214 | 10 | 49 | 374 | 181 | 518 | 2.17e-33 | 130 |
MS.gene029318.t1 | AT5G15900 | 31.378 | 392 | 202 | 16 | 26 | 378 | 46 | 409 | 2.49e-33 | 129 |
MS.gene029318.t1 | AT5G15900 | 30.280 | 393 | 205 | 17 | 26 | 378 | 65 | 428 | 3.49e-33 | 129 |
MS.gene029318.t1 | AT4G11090 | 28.261 | 414 | 244 | 18 | 1 | 374 | 21 | 421 | 2.43e-32 | 126 |
MS.gene029318.t1 | AT5G64470 | 26.377 | 345 | 222 | 10 | 55 | 375 | 55 | 391 | 2.14e-31 | 123 |
MS.gene029318.t1 | AT5G64470 | 26.211 | 351 | 221 | 11 | 55 | 375 | 55 | 397 | 5.50e-31 | 122 |
MS.gene029318.t1 | AT2G14530 | 26.741 | 359 | 214 | 10 | 55 | 378 | 62 | 406 | 6.67e-31 | 122 |
MS.gene029318.t1 | AT4G23790 | 27.424 | 361 | 209 | 14 | 53 | 374 | 77 | 423 | 1.82e-30 | 121 |
MS.gene029318.t1 | AT3G02440 | 28.286 | 350 | 209 | 11 | 55 | 374 | 127 | 464 | 2.62e-29 | 118 |
MS.gene029318.t1 | AT3G02440 | 28.286 | 350 | 209 | 11 | 55 | 374 | 135 | 472 | 2.72e-29 | 118 |
MS.gene029318.t1 | AT5G64470 | 26.423 | 246 | 162 | 7 | 55 | 283 | 55 | 298 | 3.25e-21 | 93.6 |
MS.gene029318.t1 | AT5G64470 | 26.423 | 246 | 162 | 7 | 55 | 283 | 55 | 298 | 3.79e-21 | 93.6 |
Find 94 sgRNAs with CRISPR-Local
Find 125 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCCTGGTGTGCCTGATATT+TGG | 0.189016 | 1.4:-86197050 | MS.gene029318:CDS |
GTGATTTCTCAGTTGGAAAA+TGG | 0.208372 | 1.4:-86198470 | MS.gene029318:CDS |
AGACATCAATTGAGTTCTTC+TGG | 0.226253 | 1.4:-86197830 | MS.gene029318:CDS |
ATTTCTTCCATGAATCTCTT+TGG | 0.226552 | 1.4:+86198493 | None:intergenic |
GCTCATTGGTGGACTCATTC+TGG | 0.278727 | 1.4:-86197690 | MS.gene029318:CDS |
TGATTAAATTGTAGGCAAAA+TGG | 0.281278 | 1.4:-86197315 | MS.gene029318:intron |
AAAGTGGGTGGATTTGAATT+TGG | 0.291594 | 1.4:-86197467 | MS.gene029318:CDS |
TTTCTTCCATGAATCTCTTT+GGG | 0.298282 | 1.4:+86198494 | None:intergenic |
AGCATTTCGTTCCAAATATC+AGG | 0.327867 | 1.4:+86197039 | None:intergenic |
TTCAGCCACATGCATGTTCC+AGG | 0.356693 | 1.4:-86197255 | MS.gene029318:CDS |
GTAATATCCTGTAGATATAC+TGG | 0.367331 | 1.4:+86197189 | None:intergenic |
GGACCAGTAGTAGTGCTAAA+AGG | 0.371991 | 1.4:-86197234 | MS.gene029318:CDS |
TAATAAGAGAATTCTACATT+TGG | 0.381121 | 1.4:-86197772 | MS.gene029318:CDS |
TTGAAGAGAATGCAAGGTAT+TGG | 0.381566 | 1.4:-86197743 | MS.gene029318:CDS |
ATAGCATGGAAAGACATTAA+AGG | 0.392314 | 1.4:+86197938 | None:intergenic |
TTCTTCCAATGCAAGCCAAC+TGG | 0.394214 | 1.4:+86198542 | None:intergenic |
TGCAGCCATTGGTGCCTCCC+TGG | 0.399442 | 1.4:-86197066 | MS.gene029318:CDS |
TTTAATGTCTTTCCATGCTA+TGG | 0.404785 | 1.4:-86197936 | MS.gene029318:intron |
TTGCATTTGATTCAGCTCAT+TGG | 0.406976 | 1.4:-86197704 | MS.gene029318:CDS |
TATTCCAACTGACAGGAAAA+AGG | 0.407152 | 1.4:-86197975 | MS.gene029318:CDS |
TTCTTCAGTTCTACCAATAG+TGG | 0.407885 | 1.4:+86197804 | None:intergenic |
TGTATTGAGTCCTTTCTCAT+AGG | 0.414458 | 1.4:+86197495 | None:intergenic |
GTTCTTCTGGGCACCACTAT+TGG | 0.416633 | 1.4:-86197817 | MS.gene029318:CDS |
CATTTGATTCAGCTCATTGG+TGG | 0.419213 | 1.4:-86197701 | MS.gene029318:CDS |
GACATCAATTGAGTTCTTCT+GGG | 0.424420 | 1.4:-86197829 | MS.gene029318:CDS |
AGCCAACTGGACACTTCCTC+TGG | 0.424797 | 1.4:+86198555 | None:intergenic |
AAGAAATGTGATTTCTCAGT+TGG | 0.430768 | 1.4:-86198477 | MS.gene029318:CDS |
TTTGATGCACTGAAGTATCT+TGG | 0.440296 | 1.4:-86198085 | MS.gene029318:CDS |
AAATGGAAGTGGAAGCCATT+AGG | 0.444002 | 1.4:-86198348 | MS.gene029318:CDS |
AGACATTAAAGGACCATCAT+AGG | 0.444756 | 1.4:+86197949 | None:intergenic |
CATTTCTCATAATCTGAATC+CGG | 0.445205 | 1.4:+86198366 | None:intergenic |
CTTGGGATGGAACAACCTAA+TGG | 0.446475 | 1.4:+86198333 | None:intergenic |
AGTCCTCTGATTGCAGCCAT+TGG | 0.458504 | 1.4:-86197077 | MS.gene029318:CDS |
CGGATTCAGATTATGAGAAA+TGG | 0.459664 | 1.4:-86198365 | MS.gene029318:CDS |
TTCTATAATGAGAAACCAAT+GGG | 0.459846 | 1.4:-86198026 | MS.gene029318:CDS |
GTATGGCACCTAGACATAAC+AGG | 0.470822 | 1.4:-86197414 | MS.gene029318:intron |
AGTGTCCAGTTGGCTTGCAT+TGG | 0.472840 | 1.4:-86198547 | MS.gene029318:CDS |
TTCCAAATATCAGGCACACC+AGG | 0.474779 | 1.4:+86197048 | None:intergenic |
TGCAAACCCAAAGAGATTCA+TGG | 0.480389 | 1.4:-86198500 | MS.gene029318:CDS |
TCTCTTGTATGCTTAGTTCA+AGG | 0.493508 | 1.4:-86198001 | MS.gene029318:CDS |
CATCACAAACATGAATCAAA+TGG | 0.494804 | 1.4:-86197521 | MS.gene029318:CDS |
CAAATGGTTGCCTATGAGAA+AGG | 0.503172 | 1.4:-86197505 | MS.gene029318:CDS |
GAGATTTCCAGTATATCTAC+AGG | 0.504762 | 1.4:-86197196 | MS.gene029318:CDS |
GCAGTAACTTGTCAAAAGAA+TGG | 0.505516 | 1.4:-86198393 | MS.gene029318:CDS |
GTTGGAAATGTTACAATCAA+AGG | 0.507595 | 1.4:-86197293 | MS.gene029318:CDS |
TAAATTGTAGGCAAAATGGT+TGG | 0.508760 | 1.4:-86197311 | MS.gene029318:intron |
ATGAGAAAGGACTCAATACA+TGG | 0.509591 | 1.4:-86197492 | MS.gene029318:CDS |
TTTAGCACTACTACTGGTCC+TGG | 0.509768 | 1.4:+86197237 | None:intergenic |
TATTGGTAGAACTGAAGAAA+GGG | 0.514662 | 1.4:-86197800 | MS.gene029318:CDS |
AAGGAGTTATTCCAACTGAC+AGG | 0.516555 | 1.4:-86197982 | MS.gene029318:CDS |
TACCAGGTGGGATTATTACA+TGG | 0.524110 | 1.4:-86197557 | MS.gene029318:intron |
GCACACCAGGGAGGCACCAA+TGG | 0.532334 | 1.4:+86197061 | None:intergenic |
GTTACTGCAGTGGCGAGATA+AGG | 0.535012 | 1.4:+86198408 | None:intergenic |
CAGATTATGAGAAATGGAAG+TGG | 0.537613 | 1.4:-86198359 | MS.gene029318:CDS |
CTATTGGTAGAACTGAAGAA+AGG | 0.537856 | 1.4:-86197801 | MS.gene029318:CDS |
ACATCCTTCAGTGTATAGTA+AGG | 0.542161 | 1.4:-86197139 | MS.gene029318:CDS |
AGCATACAAGAGATTCCCAT+TGG | 0.544133 | 1.4:+86198011 | None:intergenic |
GACTCAATACATGGGCAAAG+TGG | 0.544827 | 1.4:-86197483 | MS.gene029318:CDS |
ATGACTGCATTTAGAAGAGA+TGG | 0.549263 | 1.4:-86197162 | MS.gene029318:CDS |
GAGAGGCAGAAACAAGGTAA+TGG | 0.549704 | 1.4:-86197102 | MS.gene029318:CDS |
ATTCTATAATGAGAAACCAA+TGG | 0.552968 | 1.4:-86198027 | MS.gene029318:CDS |
ATTAATATCCTACCATAGCA+TGG | 0.553143 | 1.4:+86197924 | None:intergenic |
CATTAGGTTGTTCCATCCCA+AGG | 0.558505 | 1.4:-86198332 | MS.gene029318:intron |
AGGTAATAAGTGAAGAAGAG+AGG | 0.559968 | 1.4:-86197119 | MS.gene029318:CDS |
GACAGTTGGAATCATAGAGA+GGG | 0.562013 | 1.4:+86198430 | None:intergenic |
AGTACGTACCTGTTATGTCT+AGG | 0.567486 | 1.4:+86197406 | None:intergenic |
GCACCAATGGCTGCAATCAG+AGG | 0.571338 | 1.4:+86197074 | None:intergenic |
GTTTCATCATCACCTTGGGA+TGG | 0.572029 | 1.4:+86198320 | None:intergenic |
TTGTCAAAAGAATGGACGGC+CGG | 0.574038 | 1.4:-86198385 | MS.gene029318:CDS |
GGAAAGAGAATGATGTTGGT+GGG | 0.575995 | 1.4:-86198052 | MS.gene029318:CDS |
ACTCAATACATGGGCAAAGT+GGG | 0.582566 | 1.4:-86197482 | MS.gene029318:CDS |
GAGAGGAAAGAGAATGATGT+TGG | 0.587409 | 1.4:-86198056 | MS.gene029318:CDS |
AATGGCTGCAATCAGAGGAC+TGG | 0.587580 | 1.4:+86197079 | None:intergenic |
GAGAATGCAAGGTATTGGAA+AGG | 0.589108 | 1.4:-86197738 | MS.gene029318:CDS |
ATCCAGAGGAAGTGTCCAGT+TGG | 0.594248 | 1.4:-86198557 | MS.gene029318:CDS |
ATTTGATTGAAGAGAATGCA+AGG | 0.595081 | 1.4:-86197749 | MS.gene029318:CDS |
AAGTATCTTGGTAAAATGAG+AGG | 0.596417 | 1.4:-86198073 | MS.gene029318:CDS |
AGGTGGGATTATTACATGGA+AGG | 0.598017 | 1.4:-86197553 | MS.gene029318:CDS |
CAATACATGGGCAAAGTGGG+TGG | 0.598037 | 1.4:-86197479 | MS.gene029318:CDS |
ATTACCTTACTATACACTGA+AGG | 0.598619 | 1.4:+86197135 | None:intergenic |
GTTGGAATCATAGAGAGGGT+AGG | 0.612157 | 1.4:+86198434 | None:intergenic |
TAACTTGTCAAAAGAATGGA+CGG | 0.614689 | 1.4:-86198389 | MS.gene029318:CDS |
GGAACGAAATGCTGAGTGCA+TGG | 0.615044 | 1.4:-86197029 | MS.gene029318:CDS |
GAAGAAGAGAGGCAGAAACA+AGG | 0.633633 | 1.4:-86197108 | MS.gene029318:CDS |
GGACAGTTGGAATCATAGAG+AGG | 0.634353 | 1.4:+86198429 | None:intergenic |
TCCAAATATCAGGCACACCA+GGG | 0.635948 | 1.4:+86197049 | None:intergenic |
AGTGGCGAGATAAGGACAGT+TGG | 0.638580 | 1.4:+86198416 | None:intergenic |
AGGAAAGAGAATGATGTTGG+TGG | 0.644337 | 1.4:-86198053 | MS.gene029318:CDS |
AGTAGTAGTGCTAAAAGGAG+TGG | 0.649261 | 1.4:-86197229 | MS.gene029318:CDS |
TGAGAAAGGACTCAATACAT+GGG | 0.677756 | 1.4:-86197491 | MS.gene029318:CDS |
CTGGTCCTGGAACATGCATG+TGG | 0.678164 | 1.4:+86197250 | None:intergenic |
ATTATCACTGATCAATCCAG+AGG | 0.696073 | 1.4:-86198571 | MS.gene029318:CDS |
AAATATCAGGCACACCAGGG+AGG | 0.749580 | 1.4:+86197052 | None:intergenic |
AGAAACTGAAGATGTCAACA+TGG | 0.749769 | 1.4:-86198523 | MS.gene029318:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CAAAAATAAAATATTGATGA+AGG | + | chr1.4:86198290-86198309 | None:intergenic | 15.0% |
!! | AGAACATTTGATTAAATTGT+AGG | - | chr1.4:86198333-86198352 | MS.gene029318:CDS | 20.0% |
!! | ATAAAAATGACAGTAAATGA+AGG | + | chr1.4:86197040-86197059 | None:intergenic | 20.0% |
!! | TAATAAGAGAATTCTACATT+TGG | - | chr1.4:86197884-86197903 | MS.gene029318:intron | 20.0% |
!!! | CATTTTTAGAAGGAAAATTA+AGG | + | chr1.4:86197769-86197788 | None:intergenic | 20.0% |
!!! | GTAAGTAAATCATTTTTAGA+AGG | + | chr1.4:86197779-86197798 | None:intergenic | 20.0% |
!!! | TAATCATTTTTACATCCAAA+TGG | - | chr1.4:86198060-86198079 | MS.gene029318:CDS | 20.0% |
! | AAGCATGTAAGAAAACAAAA+AGG | + | chr1.4:86197386-86197405 | None:intergenic | 25.0% |
! | AATCAATCTTGATTAATACC+AGG | - | chr1.4:86198083-86198102 | MS.gene029318:CDS | 25.0% |
! | ATTCTATAATGAGAAACCAA+TGG | - | chr1.4:86197629-86197648 | MS.gene029318:intron | 25.0% |
! | TGATTAAATTGTAGGCAAAA+TGG | - | chr1.4:86198341-86198360 | MS.gene029318:CDS | 25.0% |
! | TTCTATAATGAGAAACCAAT+GGG | - | chr1.4:86197630-86197649 | MS.gene029318:intron | 25.0% |
!! | TAATCAAGATTGATTCCATT+TGG | + | chr1.4:86198078-86198097 | None:intergenic | 25.0% |
!!! | CTGTCATTTTTATTCTTCTT+AGG | - | chr1.4:86197047-86197066 | MS.gene029318:CDS | 25.0% |
AAGAAATGTGATTTCTCAGT+TGG | - | chr1.4:86197179-86197198 | MS.gene029318:CDS | 30.0% | |
AAGTATCTTGGTAAAATGAG+AGG | - | chr1.4:86197583-86197602 | MS.gene029318:intron | 30.0% | |
AATCTTGATTAATACCAGGT+GGG | - | chr1.4:86198087-86198106 | MS.gene029318:CDS | 30.0% | |
ACATGTTGTTCACTTATTAC+AGG | - | chr1.4:86197797-86197816 | MS.gene029318:CDS | 30.0% | |
AGAAGCTAAATTTATCAGCA+TGG | + | chr1.4:86197535-86197554 | None:intergenic | 30.0% | |
ATAGCATGGAAAGACATTAA+AGG | + | chr1.4:86197721-86197740 | None:intergenic | 30.0% | |
ATTAATATCCTACCATAGCA+TGG | + | chr1.4:86197735-86197754 | None:intergenic | 30.0% | |
ATTACCTTACTATACACTGA+AGG | + | chr1.4:86198524-86198543 | None:intergenic | 30.0% | |
ATTTCTTCCATGAATCTCTT+TGG | + | chr1.4:86197166-86197185 | None:intergenic | 30.0% | |
ATTTGATTGAAGAGAATGCA+AGG | - | chr1.4:86197907-86197926 | MS.gene029318:intron | 30.0% | |
CATCACAAACATGAATCAAA+TGG | - | chr1.4:86198135-86198154 | MS.gene029318:intron | 30.0% | |
CATTTCTCATAATCTGAATC+CGG | + | chr1.4:86197293-86197312 | None:intergenic | 30.0% | |
GTAATATCCTGTAGATATAC+TGG | + | chr1.4:86198470-86198489 | None:intergenic | 30.0% | |
GTTGGAAATGTTACAATCAA+AGG | - | chr1.4:86198363-86198382 | MS.gene029318:CDS | 30.0% | |
TAAATTGTAGGCAAAATGGT+TGG | - | chr1.4:86198345-86198364 | MS.gene029318:CDS | 30.0% | |
TAATGTTTCATCATCACCTT+GGG | + | chr1.4:86197343-86197362 | None:intergenic | 30.0% | |
TATTGGTAGAACTGAAGAAA+GGG | - | chr1.4:86197856-86197875 | MS.gene029318:intron | 30.0% | |
TTAATGTTTCATCATCACCT+TGG | + | chr1.4:86197344-86197363 | None:intergenic | 30.0% | |
TTTAATGTCTTTCCATGCTA+TGG | - | chr1.4:86197720-86197739 | MS.gene029318:CDS | 30.0% | |
TTTCTTCCATGAATCTCTTT+GGG | + | chr1.4:86197165-86197184 | None:intergenic | 30.0% | |
! | ATGTGGCTGAAATATTTTAC+AGG | + | chr1.4:86198392-86198411 | None:intergenic | 30.0% |
! | TAACTTGTCAAAAGAATGGA+CGG | - | chr1.4:86197267-86197286 | MS.gene029318:CDS | 30.0% |
! | TGCAACATTTTTGACATGTA+TGG | - | chr1.4:86197410-86197429 | MS.gene029318:intron | 30.0% |
ACATCCTTCAGTGTATAGTA+AGG | - | chr1.4:86198517-86198536 | MS.gene029318:CDS | 35.0% | |
AGAAACTGAAGATGTCAACA+TGG | - | chr1.4:86197133-86197152 | MS.gene029318:CDS | 35.0% | |
AGACATCAATTGAGTTCTTC+TGG | - | chr1.4:86197826-86197845 | MS.gene029318:CDS | 35.0% | |
AGACATTAAAGGACCATCAT+AGG | + | chr1.4:86197710-86197729 | None:intergenic | 35.0% | |
AGCATTTCGTTCCAAATATC+AGG | + | chr1.4:86198620-86198639 | None:intergenic | 35.0% | |
AGGTAATAAGTGAAGAAGAG+AGG | - | chr1.4:86198537-86198556 | MS.gene029318:CDS | 35.0% | |
ATGACTGCATTTAGAAGAGA+TGG | - | chr1.4:86198494-86198513 | MS.gene029318:CDS | 35.0% | |
ATGAGAAAGGACTCAATACA+TGG | - | chr1.4:86198164-86198183 | MS.gene029318:intron | 35.0% | |
ATTATCACTGATCAATCCAG+AGG | - | chr1.4:86197085-86197104 | MS.gene029318:CDS | 35.0% | |
CAATCTTGATTAATACCAGG+TGG | - | chr1.4:86198086-86198105 | MS.gene029318:CDS | 35.0% | |
CAGATTATGAGAAATGGAAG+TGG | - | chr1.4:86197297-86197316 | MS.gene029318:CDS | 35.0% | |
CGGATTCAGATTATGAGAAA+TGG | - | chr1.4:86197291-86197310 | MS.gene029318:CDS | 35.0% | |
CTATTGGTAGAACTGAAGAA+AGG | - | chr1.4:86197855-86197874 | MS.gene029318:intron | 35.0% | |
GACATCAATTGAGTTCTTCT+GGG | - | chr1.4:86197827-86197846 | MS.gene029318:CDS | 35.0% | |
GAGATTTCCAGTATATCTAC+AGG | - | chr1.4:86198460-86198479 | MS.gene029318:CDS | 35.0% | |
GTGATTTCTCAGTTGGAAAA+TGG | - | chr1.4:86197186-86197205 | MS.gene029318:CDS | 35.0% | |
TATTCCAACTGACAGGAAAA+AGG | - | chr1.4:86197681-86197700 | MS.gene029318:CDS | 35.0% | |
TCTCTTGTATGCTTAGTTCA+AGG | - | chr1.4:86197655-86197674 | MS.gene029318:intron | 35.0% | |
TGAGAAAGGACTCAATACAT+GGG | - | chr1.4:86198165-86198184 | MS.gene029318:intron | 35.0% | |
TGTATTGAGTCCTTTCTCAT+AGG | + | chr1.4:86198164-86198183 | None:intergenic | 35.0% | |
TTCTTCAGTTCTACCAATAG+TGG | + | chr1.4:86197855-86197874 | None:intergenic | 35.0% | |
TTGAAGAGAATGCAAGGTAT+TGG | - | chr1.4:86197913-86197932 | MS.gene029318:intron | 35.0% | |
TTGCATTTGATTCAGCTCAT+TGG | - | chr1.4:86197952-86197971 | MS.gene029318:CDS | 35.0% | |
! | AAAGTGGGTGGATTTGAATT+TGG | - | chr1.4:86198189-86198208 | MS.gene029318:intron | 35.0% |
! | CATACTTCTAAAAACGACTC+GGG | + | chr1.4:86198227-86198246 | None:intergenic | 35.0% |
! | CCATACTTCTAAAAACGACT+CGG | + | chr1.4:86198228-86198247 | None:intergenic | 35.0% |
! | GCAGTAACTTGTCAAAAGAA+TGG | - | chr1.4:86197263-86197282 | MS.gene029318:CDS | 35.0% |
! | TTTGATGCACTGAAGTATCT+TGG | - | chr1.4:86197571-86197590 | MS.gene029318:intron | 35.0% |
AAATGGAAGTGGAAGCCATT+AGG | - | chr1.4:86197308-86197327 | MS.gene029318:intron | 40.0% | |
AAGGAGTTATTCCAACTGAC+AGG | - | chr1.4:86197674-86197693 | MS.gene029318:intron | 40.0% | |
ACTCAATACATGGGCAAAGT+GGG | - | chr1.4:86198174-86198193 | MS.gene029318:intron | 40.0% | |
AGCATACAAGAGATTCCCAT+TGG | + | chr1.4:86197648-86197667 | None:intergenic | 40.0% | |
AGCATGGTTTACGTGTGTTT+GGG | + | chr1.4:86197519-86197538 | None:intergenic | 40.0% | |
AGGAAAAAGGTCACCTATGA+TGG | - | chr1.4:86197694-86197713 | MS.gene029318:CDS | 40.0% | |
AGGAAAGAGAATGATGTTGG+TGG | - | chr1.4:86197603-86197622 | MS.gene029318:intron | 40.0% | |
AGGTGGGATTATTACATGGA+AGG | - | chr1.4:86198103-86198122 | MS.gene029318:intron | 40.0% | |
AGTACGTACCTGTTATGTCT+AGG | + | chr1.4:86198253-86198272 | None:intergenic | 40.0% | |
AGTAGTAGTGCTAAAAGGAG+TGG | - | chr1.4:86198427-86198446 | MS.gene029318:CDS | 40.0% | |
ATGTCTTTCCATGCTATGGT+AGG | - | chr1.4:86197724-86197743 | MS.gene029318:CDS | 40.0% | |
CAAATGGTTGCCTATGAGAA+AGG | - | chr1.4:86198151-86198170 | MS.gene029318:intron | 40.0% | |
CATTTGATTCAGCTCATTGG+TGG | - | chr1.4:86197955-86197974 | MS.gene029318:CDS | 40.0% | |
GACAGTTGGAATCATAGAGA+GGG | + | chr1.4:86197229-86197248 | None:intergenic | 40.0% | |
GAGAGGAAAGAGAATGATGT+TGG | - | chr1.4:86197600-86197619 | MS.gene029318:intron | 40.0% | |
GGAAAGAGAATGATGTTGGT+GGG | - | chr1.4:86197604-86197623 | MS.gene029318:intron | 40.0% | |
TACCAGGTGGGATTATTACA+TGG | - | chr1.4:86198099-86198118 | MS.gene029318:intron | 40.0% | |
TGCAAACCCAAAGAGATTCA+TGG | - | chr1.4:86197156-86197175 | MS.gene029318:CDS | 40.0% | |
TTCCATGTAATAATCCCACC+TGG | + | chr1.4:86198104-86198123 | None:intergenic | 40.0% | |
! | ACTCCTTTTAGCACTACTAC+TGG | + | chr1.4:86198428-86198447 | None:intergenic | 40.0% |
! | AGCTTCTCGATGACATTTTC+AGG | - | chr1.4:86197548-86197567 | MS.gene029318:CDS | 40.0% |
! | CTTTTGACAAGTTACTGCAG+TGG | + | chr1.4:86197261-86197280 | None:intergenic | 40.0% |
!! | GAGAATGCAAGGTATTGGAA+AGG | - | chr1.4:86197918-86197937 | MS.gene029318:intron | 40.0% |
!!! | CCGAGTCGTTTTTAGAAGTA+TGG | - | chr1.4:86198225-86198244 | MS.gene029318:intron | 40.0% |
CAGCATGGTTTACGTGTGTT+TGG | + | chr1.4:86197520-86197539 | None:intergenic | 45.0% | |
CTTGGGATGGAACAACCTAA+TGG | + | chr1.4:86197326-86197345 | None:intergenic | 45.0% | |
GAAGAAGAGAGGCAGAAACA+AGG | - | chr1.4:86198548-86198567 | MS.gene029318:CDS | 45.0% | |
GACTCAATACATGGGCAAAG+TGG | - | chr1.4:86198173-86198192 | MS.gene029318:intron | 45.0% | |
GAGAGGCAGAAACAAGGTAA+TGG | - | chr1.4:86198554-86198573 | MS.gene029318:CDS | 45.0% | |
GGACAGTTGGAATCATAGAG+AGG | + | chr1.4:86197230-86197249 | None:intergenic | 45.0% | |
GGACCAGTAGTAGTGCTAAA+AGG | - | chr1.4:86198422-86198441 | MS.gene029318:CDS | 45.0% | |
GTATGGCACCTAGACATAAC+AGG | - | chr1.4:86198242-86198261 | MS.gene029318:intron | 45.0% | |
GTTGGAATCATAGAGAGGGT+AGG | + | chr1.4:86197225-86197244 | None:intergenic | 45.0% | |
GTTTCATCATCACCTTGGGA+TGG | + | chr1.4:86197339-86197358 | None:intergenic | 45.0% | |
TCCAAATATCAGGCACACCA+GGG | + | chr1.4:86198610-86198629 | None:intergenic | 45.0% | |
TTCCAAATATCAGGCACACC+AGG | + | chr1.4:86198611-86198630 | None:intergenic | 45.0% | |
TTCTTCCAATGCAAGCCAAC+TGG | + | chr1.4:86197117-86197136 | None:intergenic | 45.0% | |
TTGTCAAAAGAATGGACGGC+CGG | - | chr1.4:86197271-86197290 | MS.gene029318:CDS | 45.0% | |
TTTAGCACTACTACTGGTCC+TGG | + | chr1.4:86198422-86198441 | None:intergenic | 45.0% | |
! | CATTAGGTTGTTCCATCCCA+AGG | - | chr1.4:86197324-86197343 | MS.gene029318:intron | 45.0% |
! | GTGACCTTTTTCCTGTCAGT+TGG | + | chr1.4:86197688-86197707 | None:intergenic | 45.0% |
!! | AAAACGACTCGGGTTTTTCG+AGG | + | chr1.4:86198217-86198236 | None:intergenic | 45.0% |
AAATATCAGGCACACCAGGG+AGG | + | chr1.4:86198607-86198626 | None:intergenic | 50.0% | |
AATGGCTGCAATCAGAGGAC+TGG | + | chr1.4:86198580-86198599 | None:intergenic | 50.0% | |
AGTCCTCTGATTGCAGCCAT+TGG | - | chr1.4:86198579-86198598 | MS.gene029318:CDS | 50.0% | |
AGTGGCGAGATAAGGACAGT+TGG | + | chr1.4:86197243-86197262 | None:intergenic | 50.0% | |
CAATACATGGGCAAAGTGGG+TGG | - | chr1.4:86198177-86198196 | MS.gene029318:intron | 50.0% | |
GGAACGAAATGCTGAGTGCA+TGG | - | chr1.4:86198627-86198646 | MS.gene029318:CDS | 50.0% | |
GTTACTGCAGTGGCGAGATA+AGG | + | chr1.4:86197251-86197270 | None:intergenic | 50.0% | |
GTTCTTCTGGGCACCACTAT+TGG | - | chr1.4:86197839-86197858 | MS.gene029318:CDS | 50.0% | |
TCCCTGGTGTGCCTGATATT+TGG | - | chr1.4:86198606-86198625 | MS.gene029318:CDS | 50.0% | |
TTCAGCCACATGCATGTTCC+AGG | - | chr1.4:86198401-86198420 | MS.gene029318:CDS | 50.0% | |
!! | AGTGTCCAGTTGGCTTGCAT+TGG | - | chr1.4:86197109-86197128 | MS.gene029318:CDS | 50.0% |
!! | ATCCAGAGGAAGTGTCCAGT+TGG | - | chr1.4:86197099-86197118 | MS.gene029318:CDS | 50.0% |
!! | GCTCATTGGTGGACTCATTC+TGG | - | chr1.4:86197966-86197985 | MS.gene029318:CDS | 50.0% |
AGCCAACTGGACACTTCCTC+TGG | + | chr1.4:86197104-86197123 | None:intergenic | 55.0% | |
CTGGTCCTGGAACATGCATG+TGG | + | chr1.4:86198409-86198428 | None:intergenic | 55.0% | |
GCACCAATGGCTGCAATCAG+AGG | + | chr1.4:86198585-86198604 | None:intergenic | 55.0% | |
! | TGCAGCCATTGGTGCCTCCC+TGG | - | chr1.4:86198590-86198609 | MS.gene029318:CDS | 65.0% |
!! | GCACACCAGGGAGGCACCAA+TGG | + | chr1.4:86198598-86198617 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 86197023 | 86198655 | 86197023 | ID=MS.gene029318 |
chr1.4 | mRNA | 86197023 | 86198655 | 86197023 | ID=MS.gene029318.t1;Parent=MS.gene029318 |
chr1.4 | exon | 86198333 | 86198655 | 86198333 | ID=MS.gene029318.t1.exon1;Parent=MS.gene029318.t1 |
chr1.4 | CDS | 86198333 | 86198655 | 86198333 | ID=cds.MS.gene029318.t1;Parent=MS.gene029318.t1 |
chr1.4 | exon | 86197937 | 86198108 | 86197937 | ID=MS.gene029318.t1.exon2;Parent=MS.gene029318.t1 |
chr1.4 | CDS | 86197937 | 86198108 | 86197937 | ID=cds.MS.gene029318.t1;Parent=MS.gene029318.t1 |
chr1.4 | exon | 86197678 | 86197859 | 86197678 | ID=MS.gene029318.t1.exon3;Parent=MS.gene029318.t1 |
chr1.4 | CDS | 86197678 | 86197859 | 86197678 | ID=cds.MS.gene029318.t1;Parent=MS.gene029318.t1 |
chr1.4 | exon | 86197415 | 86197573 | 86197415 | ID=MS.gene029318.t1.exon4;Parent=MS.gene029318.t1 |
chr1.4 | CDS | 86197415 | 86197573 | 86197415 | ID=cds.MS.gene029318.t1;Parent=MS.gene029318.t1 |
chr1.4 | exon | 86197023 | 86197323 | 86197023 | ID=MS.gene029318.t1.exon5;Parent=MS.gene029318.t1 |
chr1.4 | CDS | 86197023 | 86197323 | 86197023 | ID=cds.MS.gene029318.t1;Parent=MS.gene029318.t1 |
Gene Sequence |
Protein sequence |