Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070181.t1 | XP_003599941.1 | 96.1 | 257 | 10 | 0 | 2 | 258 | 95 | 351 | 9.30E-148 | 532.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070181.t1 | Q6DR10 | 61.5 | 257 | 97 | 2 | 3 | 257 | 109 | 365 | 2.3e-94 | 346.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070181.t1 | G7J195 | 96.1 | 257 | 10 | 0 | 2 | 258 | 95 | 351 | 6.7e-148 | 532.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049217 | MS.gene070181 | 0.812197 | 4.79E-51 | -1.69E-46 |
| MS.gene049222 | MS.gene070181 | 0.813545 | 2.42E-51 | -1.69E-46 |
| MS.gene049356 | MS.gene070181 | 0.813988 | 1.94E-51 | -1.69E-46 |
| MS.gene049369 | MS.gene070181 | 0.81055 | 1.09E-50 | -1.69E-46 |
| MS.gene049396 | MS.gene070181 | 0.800559 | 1.36E-48 | -1.69E-46 |
| MS.gene049488 | MS.gene070181 | 0.828434 | 9.01E-55 | -1.69E-46 |
| MS.gene049609 | MS.gene070181 | 0.809885 | 1.52E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene070181 | 0.837845 | 4.09E-57 | -1.69E-46 |
| MS.gene050593 | MS.gene070181 | 0.81704 | 4.05E-52 | -1.69E-46 |
| MS.gene050670 | MS.gene070181 | 0.81003 | 1.41E-50 | -1.69E-46 |
| MS.gene050747 | MS.gene070181 | 0.811027 | 8.60E-51 | -1.69E-46 |
| MS.gene050772 | MS.gene070181 | 0.814559 | 1.45E-51 | -1.69E-46 |
| MS.gene05080 | MS.gene070181 | 0.800338 | 1.51E-48 | -1.69E-46 |
| MS.gene051167 | MS.gene070181 | -0.818355 | 2.05E-52 | -1.69E-46 |
| MS.gene051387 | MS.gene070181 | 0.806793 | 6.92E-50 | -1.69E-46 |
| MS.gene051666 | MS.gene070181 | 0.806185 | 9.30E-50 | -1.69E-46 |
| MS.gene051692 | MS.gene070181 | 0.812604 | 3.90E-51 | -1.69E-46 |
| MS.gene051838 | MS.gene070181 | 0.810957 | 8.90E-51 | -1.69E-46 |
| MS.gene052484 | MS.gene070181 | 0.804544 | 2.05E-49 | -1.69E-46 |
| MS.gene052506 | MS.gene070181 | 0.800675 | 1.29E-48 | -1.69E-46 |
| MS.gene052615 | MS.gene070181 | 0.803642 | 3.16E-49 | -1.69E-46 |
| MS.gene053103 | MS.gene070181 | 0.802286 | 6.03E-49 | -1.69E-46 |
| MS.gene053104 | MS.gene070181 | 0.805065 | 1.60E-49 | -1.69E-46 |
| MS.gene053449 | MS.gene070181 | 0.823008 | 1.75E-53 | -1.69E-46 |
| MS.gene053574 | MS.gene070181 | 0.810262 | 1.26E-50 | -1.69E-46 |
| MS.gene053632 | MS.gene070181 | 0.846688 | 1.86E-59 | -1.69E-46 |
| MS.gene053912 | MS.gene070181 | 0.849856 | 2.47E-60 | -1.69E-46 |
| MS.gene053916 | MS.gene070181 | 0.825358 | 4.90E-54 | -1.69E-46 |
| MS.gene054003 | MS.gene070181 | 0.803828 | 2.89E-49 | -1.69E-46 |
| MS.gene054595 | MS.gene070181 | 0.800034 | 1.74E-48 | -1.69E-46 |
| MS.gene05505 | MS.gene070181 | 0.819824 | 9.48E-53 | -1.69E-46 |
| MS.gene055206 | MS.gene070181 | 0.825439 | 4.68E-54 | -1.69E-46 |
| MS.gene055486 | MS.gene070181 | 0.834924 | 2.26E-56 | -1.69E-46 |
| MS.gene055722 | MS.gene070181 | 0.80638 | 8.46E-50 | -1.69E-46 |
| MS.gene05592 | MS.gene070181 | 0.822737 | 2.02E-53 | -1.69E-46 |
| MS.gene055941 | MS.gene070181 | 0.838612 | 2.59E-57 | -1.69E-46 |
| MS.gene056422 | MS.gene070181 | 0.805129 | 1.55E-49 | -1.69E-46 |
| MS.gene056448 | MS.gene070181 | 0.813561 | 2.41E-51 | -1.69E-46 |
| MS.gene056511 | MS.gene070181 | 0.859645 | 3.58E-63 | -1.69E-46 |
| MS.gene05664 | MS.gene070181 | 0.81894 | 1.51E-52 | -1.69E-46 |
| MS.gene057076 | MS.gene070181 | 0.833381 | 5.51E-56 | -1.69E-46 |
| MS.gene057086 | MS.gene070181 | 0.8074 | 5.15E-50 | -1.69E-46 |
| MS.gene057146 | MS.gene070181 | 0.827792 | 1.29E-54 | -1.69E-46 |
| MS.gene05735 | MS.gene070181 | 0.800013 | 1.76E-48 | -1.69E-46 |
| MS.gene057416 | MS.gene070181 | 0.824702 | 7.00E-54 | -1.69E-46 |
| MS.gene057734 | MS.gene070181 | 0.859739 | 3.36E-63 | -1.69E-46 |
| MS.gene057856 | MS.gene070181 | 0.824633 | 7.26E-54 | -1.69E-46 |
| MS.gene057926 | MS.gene070181 | 0.802879 | 4.55E-49 | -1.69E-46 |
| MS.gene058006 | MS.gene070181 | 0.803715 | 3.05E-49 | -1.69E-46 |
| MS.gene058928 | MS.gene070181 | 0.803836 | 2.88E-49 | -1.69E-46 |
| MS.gene059368 | MS.gene070181 | 0.815368 | 9.58E-52 | -1.69E-46 |
| MS.gene059455 | MS.gene070181 | 0.835057 | 2.09E-56 | -1.69E-46 |
| MS.gene059711 | MS.gene070181 | 0.817841 | 2.68E-52 | -1.69E-46 |
| MS.gene060804 | MS.gene070181 | 0.823515 | 1.33E-53 | -1.69E-46 |
| MS.gene060818 | MS.gene070181 | 0.830437 | 2.94E-55 | -1.69E-46 |
| MS.gene060835 | MS.gene070181 | 0.815743 | 7.91E-52 | -1.69E-46 |
| MS.gene060837 | MS.gene070181 | 0.837345 | 5.49E-57 | -1.69E-46 |
| MS.gene061041 | MS.gene070181 | 0.808884 | 2.49E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene070181 | MS.gene31379 | PPI |
| MS.gene070181 | MS.gene065049 | PPI |
| MS.gene070181 | MS.gene028817 | PPI |
| MS.gene070181 | MS.gene029318 | PPI |
| MS.gene070181 | MS.gene040643 | PPI |
| MS.gene070181 | MS.gene043504 | PPI |
| MS.gene070181 | MS.gene068190 | PPI |
| MS.gene070181 | MS.gene006674 | PPI |
| MS.gene070181 | MS.gene76221 | PPI |
| MS.gene070181 | MS.gene045508 | PPI |
| MS.gene070181 | MS.gene073606 | PPI |
| MS.gene070181 | MS.gene73821 | PPI |
| MS.gene070181 | MS.gene031625 | PPI |
| MS.gene070181 | MS.gene84006 | PPI |
| MS.gene070181 | MS.gene74966 | PPI |
| MS.gene070181 | MS.gene54859 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070181.t1 | MTR_3g049330 | 96.109 | 257 | 10 | 0 | 2 | 258 | 95 | 351 | 0.0 | 519 |
| MS.gene070181.t1 | MTR_5g034810 | 68.482 | 257 | 79 | 2 | 3 | 258 | 98 | 353 | 4.65e-128 | 367 |
| MS.gene070181.t1 | MTR_2g073510 | 65.873 | 252 | 86 | 0 | 3 | 254 | 99 | 350 | 1.22e-124 | 358 |
| MS.gene070181.t1 | MTR_2g015720 | 59.608 | 255 | 101 | 2 | 3 | 257 | 106 | 358 | 3.24e-109 | 319 |
| MS.gene070181.t1 | MTR_4g079700 | 54.297 | 256 | 114 | 2 | 2 | 257 | 111 | 363 | 2.85e-100 | 297 |
| MS.gene070181.t1 | MTR_4g087730 | 55.469 | 256 | 112 | 2 | 3 | 258 | 110 | 363 | 2.72e-99 | 294 |
| MS.gene070181.t1 | MTR_2g091175 | 53.696 | 257 | 116 | 2 | 2 | 258 | 114 | 367 | 4.47e-99 | 294 |
| MS.gene070181.t1 | MTR_4g088030 | 54.688 | 256 | 114 | 2 | 3 | 258 | 98 | 351 | 3.48e-98 | 291 |
| MS.gene070181.t1 | MTR_3g021060 | 52.941 | 255 | 118 | 1 | 3 | 257 | 111 | 363 | 1.53e-96 | 287 |
| MS.gene070181.t1 | MTR_2g073500 | 50.193 | 259 | 116 | 4 | 2 | 258 | 99 | 346 | 2.08e-91 | 274 |
| MS.gene070181.t1 | MTR_3g035830 | 51.751 | 257 | 118 | 3 | 3 | 257 | 96 | 348 | 6.44e-91 | 273 |
| MS.gene070181.t1 | MTR_3g021090 | 52.549 | 255 | 111 | 4 | 3 | 253 | 96 | 344 | 9.05e-90 | 271 |
| MS.gene070181.t1 | MTR_3g464570 | 49.815 | 271 | 120 | 7 | 3 | 258 | 4 | 273 | 8.80e-84 | 252 |
| MS.gene070181.t1 | MTR_3g464570 | 49.815 | 271 | 120 | 7 | 3 | 258 | 108 | 377 | 3.39e-82 | 251 |
| MS.gene070181.t1 | MTR_5g071350 | 45.324 | 278 | 130 | 5 | 3 | 258 | 123 | 400 | 3.50e-80 | 247 |
| MS.gene070181.t1 | MTR_1g111010 | 49.035 | 259 | 116 | 7 | 2 | 258 | 98 | 342 | 8.80e-77 | 236 |
| MS.gene070181.t1 | MTR_1g112210 | 40.824 | 267 | 139 | 5 | 3 | 257 | 123 | 382 | 7.95e-65 | 207 |
| MS.gene070181.t1 | MTR_1g050448 | 40.977 | 266 | 139 | 6 | 3 | 257 | 117 | 375 | 4.89e-64 | 204 |
| MS.gene070181.t1 | MTR_1g112210 | 40.075 | 267 | 128 | 6 | 3 | 257 | 123 | 369 | 5.23e-61 | 196 |
| MS.gene070181.t1 | MTR_4g121560 | 38.790 | 281 | 145 | 7 | 1 | 258 | 178 | 454 | 8.30e-61 | 199 |
| MS.gene070181.t1 | MTR_5g082880 | 37.943 | 282 | 149 | 6 | 3 | 258 | 231 | 512 | 4.70e-57 | 190 |
| MS.gene070181.t1 | MTR_4g016940 | 35.145 | 276 | 158 | 5 | 3 | 257 | 152 | 427 | 6.69e-57 | 187 |
| MS.gene070181.t1 | MTR_3g070900 | 35.484 | 279 | 157 | 5 | 3 | 258 | 172 | 450 | 4.87e-55 | 183 |
| MS.gene070181.t1 | MTR_0136s0010 | 36.331 | 278 | 153 | 7 | 3 | 258 | 235 | 510 | 1.32e-54 | 184 |
| MS.gene070181.t1 | MTR_4g126950 | 36.101 | 277 | 153 | 9 | 3 | 258 | 174 | 447 | 4.52e-54 | 181 |
| MS.gene070181.t1 | MTR_7g093450 | 36.691 | 278 | 152 | 7 | 3 | 258 | 313 | 588 | 9.90e-54 | 183 |
| MS.gene070181.t1 | MTR_7g109550 | 37.132 | 272 | 148 | 8 | 3 | 257 | 202 | 467 | 3.91e-53 | 179 |
| MS.gene070181.t1 | MTR_5g059400 | 35.587 | 281 | 156 | 6 | 1 | 258 | 238 | 516 | 3.48e-51 | 175 |
| MS.gene070181.t1 | MTR_1g116130 | 35.587 | 281 | 156 | 6 | 1 | 258 | 238 | 516 | 3.48e-51 | 175 |
| MS.gene070181.t1 | MTR_7g068920 | 35.145 | 276 | 158 | 5 | 3 | 257 | 146 | 421 | 9.64e-51 | 171 |
| MS.gene070181.t1 | MTR_5g033800 | 34.164 | 281 | 154 | 8 | 3 | 258 | 210 | 484 | 1.42e-50 | 172 |
| MS.gene070181.t1 | MTR_8g463790 | 34.629 | 283 | 153 | 6 | 1 | 258 | 135 | 410 | 2.61e-50 | 170 |
| MS.gene070181.t1 | MTR_4g014430 | 34.909 | 275 | 157 | 5 | 3 | 257 | 174 | 446 | 4.19e-49 | 167 |
| MS.gene070181.t1 | MTR_8g069790 | 34.657 | 277 | 158 | 5 | 3 | 258 | 243 | 517 | 8.08e-49 | 169 |
| MS.gene070181.t1 | MTR_4g014440 | 32.384 | 281 | 165 | 7 | 3 | 258 | 128 | 408 | 6.61e-47 | 161 |
| MS.gene070181.t1 | MTR_7g070060 | 31.673 | 281 | 167 | 7 | 3 | 258 | 28 | 308 | 4.71e-44 | 151 |
| MS.gene070181.t1 | MTR_3g071650 | 32.852 | 277 | 165 | 5 | 3 | 258 | 155 | 431 | 1.75e-43 | 152 |
| MS.gene070181.t1 | MTR_7g070060 | 31.673 | 281 | 167 | 7 | 3 | 258 | 130 | 410 | 4.67e-43 | 151 |
| MS.gene070181.t1 | MTR_5g069320 | 34.444 | 270 | 106 | 10 | 3 | 250 | 166 | 386 | 1.17e-41 | 147 |
| MS.gene070181.t1 | MTR_5g083260 | 33.216 | 283 | 156 | 8 | 3 | 258 | 149 | 425 | 1.39e-41 | 147 |
| MS.gene070181.t1 | MTR_3g090120 | 33.948 | 271 | 156 | 7 | 3 | 258 | 198 | 460 | 1.00e-40 | 146 |
| MS.gene070181.t1 | MTR_1g058380 | 32.609 | 276 | 164 | 6 | 3 | 258 | 122 | 395 | 1.94e-40 | 144 |
| MS.gene070181.t1 | MTR_2g022560 | 30.466 | 279 | 169 | 7 | 3 | 258 | 162 | 438 | 4.48e-36 | 133 |
| MS.gene070181.t1 | MTR_8g093530 | 30.769 | 273 | 166 | 7 | 1 | 258 | 153 | 417 | 2.01e-35 | 131 |
| MS.gene070181.t1 | MTR_7g094750 | 30.986 | 284 | 162 | 8 | 3 | 258 | 156 | 433 | 3.94e-34 | 128 |
| MS.gene070181.t1 | MTR_3g021150 | 49.138 | 116 | 57 | 1 | 122 | 237 | 1 | 114 | 3.49e-33 | 117 |
| MS.gene070181.t1 | MTR_5g033800 | 31.765 | 170 | 104 | 3 | 3 | 160 | 210 | 379 | 5.47e-25 | 102 |
| MS.gene070181.t1 | MTR_6g016240 | 29.720 | 286 | 165 | 11 | 2 | 257 | 137 | 416 | 1.24e-23 | 99.0 |
| MS.gene070181.t1 | MTR_8g093870 | 31.579 | 285 | 154 | 13 | 3 | 257 | 199 | 472 | 3.38e-22 | 95.5 |
| MS.gene070181.t1 | MTR_7g070060 | 29.518 | 166 | 108 | 3 | 3 | 159 | 130 | 295 | 7.60e-20 | 87.0 |
| MS.gene070181.t1 | MTR_3g021080 | 37.755 | 98 | 40 | 1 | 161 | 258 | 104 | 180 | 1.34e-17 | 78.6 |
| MS.gene070181.t1 | MTR_4g125060 | 29.577 | 284 | 161 | 16 | 3 | 257 | 266 | 539 | 4.27e-17 | 80.9 |
| MS.gene070181.t1 | MTR_4g125060 | 29.577 | 284 | 161 | 16 | 3 | 257 | 237 | 510 | 4.66e-17 | 80.5 |
| MS.gene070181.t1 | MTR_4g125060 | 29.577 | 284 | 161 | 16 | 3 | 257 | 198 | 471 | 4.74e-17 | 80.5 |
| MS.gene070181.t1 | MTR_1g076690 | 26.370 | 292 | 165 | 11 | 1 | 253 | 286 | 566 | 1.10e-16 | 79.7 |
| MS.gene070181.t1 | MTR_4g092830 | 26.990 | 289 | 169 | 11 | 3 | 258 | 114 | 393 | 1.33e-15 | 76.3 |
| MS.gene070181.t1 | MTR_2g016060 | 27.241 | 290 | 160 | 14 | 3 | 253 | 119 | 396 | 2.79e-15 | 75.1 |
| MS.gene070181.t1 | MTR_5g035150 | 26.148 | 283 | 172 | 11 | 3 | 253 | 150 | 427 | 1.27e-14 | 73.2 |
| MS.gene070181.t1 | MTR_6g016880 | 25.965 | 285 | 173 | 10 | 3 | 257 | 143 | 419 | 2.79e-14 | 72.4 |
| MS.gene070181.t1 | MTR_7g094750 | 26.744 | 172 | 112 | 3 | 3 | 160 | 156 | 327 | 1.23e-13 | 69.7 |
| MS.gene070181.t1 | MTR_6g016875 | 26.316 | 285 | 167 | 11 | 3 | 253 | 129 | 404 | 2.07e-12 | 66.6 |
| MS.gene070181.t1 | MTR_3g109840 | 27.076 | 277 | 166 | 10 | 7 | 253 | 141 | 411 | 2.52e-12 | 66.6 |
| MS.gene070181.t1 | MTR_8g027900 | 25.850 | 294 | 171 | 12 | 1 | 258 | 274 | 556 | 4.55e-12 | 65.9 |
| MS.gene070181.t1 | MTR_8g099300 | 25.606 | 289 | 179 | 11 | 1 | 258 | 137 | 420 | 1.85e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070181.t1 | AT2G30900 | 61.240 | 258 | 98 | 2 | 3 | 258 | 109 | 366 | 2.71e-116 | 338 |
| MS.gene070181.t1 | AT3G14850 | 58.301 | 259 | 105 | 3 | 2 | 258 | 98 | 355 | 6.39e-108 | 316 |
| MS.gene070181.t1 | AT3G14850 | 58.498 | 253 | 102 | 3 | 8 | 258 | 1 | 252 | 6.09e-107 | 310 |
| MS.gene070181.t1 | AT1G29050 | 56.809 | 257 | 107 | 3 | 2 | 257 | 125 | 378 | 1.72e-104 | 308 |
| MS.gene070181.t1 | AT2G34070 | 56.809 | 257 | 106 | 4 | 3 | 257 | 130 | 383 | 1.88e-103 | 306 |
| MS.gene070181.t1 | AT2G34070 | 56.746 | 252 | 104 | 4 | 8 | 257 | 1 | 249 | 1.02e-102 | 299 |
| MS.gene070181.t1 | AT2G42570 | 54.297 | 256 | 115 | 2 | 3 | 258 | 112 | 365 | 4.08e-102 | 301 |
| MS.gene070181.t1 | AT2G31110 | 53.725 | 255 | 116 | 2 | 3 | 257 | 110 | 362 | 3.35e-101 | 299 |
| MS.gene070181.t1 | AT1G78710 | 52.529 | 257 | 120 | 2 | 3 | 258 | 102 | 357 | 2.07e-97 | 289 |
| MS.gene070181.t1 | AT2G31110 | 54.106 | 207 | 93 | 2 | 51 | 257 | 10 | 214 | 2.54e-83 | 248 |
| MS.gene070181.t1 | AT5G58600 | 47.407 | 270 | 128 | 5 | 3 | 258 | 132 | 401 | 1.04e-79 | 246 |
| MS.gene070181.t1 | AT2G30010 | 42.545 | 275 | 139 | 4 | 3 | 258 | 123 | 397 | 9.94e-70 | 220 |
| MS.gene070181.t1 | AT2G30010 | 42.545 | 275 | 139 | 4 | 3 | 258 | 166 | 440 | 1.94e-69 | 220 |
| MS.gene070181.t1 | AT2G30900 | 64.516 | 155 | 54 | 1 | 1 | 154 | 107 | 261 | 2.94e-68 | 212 |
| MS.gene070181.t1 | AT3G54260 | 42.066 | 271 | 132 | 6 | 3 | 258 | 115 | 375 | 1.95e-66 | 211 |
| MS.gene070181.t1 | AT1G78710 | 42.802 | 257 | 92 | 4 | 3 | 258 | 95 | 297 | 1.45e-62 | 198 |
| MS.gene070181.t1 | AT5G06700 | 39.146 | 281 | 145 | 8 | 1 | 258 | 318 | 595 | 9.05e-59 | 196 |
| MS.gene070181.t1 | AT2G31110 | 53.947 | 152 | 70 | 0 | 3 | 154 | 110 | 261 | 2.50e-57 | 184 |
| MS.gene070181.t1 | AT3G62390 | 38.768 | 276 | 147 | 9 | 1 | 258 | 201 | 472 | 3.23e-56 | 187 |
| MS.gene070181.t1 | AT3G12060 | 38.214 | 280 | 149 | 6 | 1 | 258 | 259 | 536 | 3.45e-56 | 189 |
| MS.gene070181.t1 | AT5G49340 | 37.943 | 282 | 149 | 7 | 1 | 258 | 163 | 442 | 2.48e-55 | 184 |
| MS.gene070181.t1 | AT5G20590 | 35.740 | 277 | 154 | 7 | 3 | 258 | 207 | 480 | 2.40e-54 | 182 |
| MS.gene070181.t1 | AT5G01360 | 34.657 | 277 | 159 | 5 | 3 | 257 | 102 | 378 | 5.54e-54 | 179 |
| MS.gene070181.t1 | AT5G01360 | 34.657 | 277 | 159 | 5 | 3 | 257 | 158 | 434 | 2.27e-53 | 179 |
| MS.gene070181.t1 | AT3G55990 | 34.050 | 279 | 161 | 5 | 3 | 258 | 206 | 484 | 9.81e-53 | 178 |
| MS.gene070181.t1 | AT2G40150 | 34.828 | 290 | 150 | 7 | 3 | 258 | 137 | 421 | 7.43e-52 | 174 |
| MS.gene070181.t1 | AT5G01620 | 34.909 | 275 | 157 | 5 | 3 | 257 | 177 | 449 | 4.33e-50 | 170 |
| MS.gene070181.t1 | AT5G01620 | 34.909 | 275 | 157 | 5 | 3 | 257 | 177 | 449 | 4.33e-50 | 170 |
| MS.gene070181.t1 | AT5G01620 | 34.909 | 275 | 157 | 5 | 3 | 257 | 185 | 457 | 5.82e-50 | 170 |
| MS.gene070181.t1 | AT1G60790 | 36.201 | 279 | 153 | 7 | 3 | 258 | 257 | 533 | 3.28e-49 | 170 |
| MS.gene070181.t1 | AT1G73140 | 33.453 | 278 | 159 | 6 | 3 | 258 | 133 | 406 | 7.95e-49 | 166 |
| MS.gene070181.t1 | AT2G40160 | 32.979 | 282 | 163 | 6 | 3 | 258 | 143 | 424 | 1.15e-48 | 166 |
| MS.gene070181.t1 | AT2G40160 | 32.979 | 282 | 163 | 6 | 3 | 258 | 143 | 424 | 1.62e-48 | 166 |
| MS.gene070181.t1 | AT5G58600 | 48.101 | 158 | 81 | 1 | 3 | 159 | 132 | 289 | 2.54e-46 | 156 |
| MS.gene070181.t1 | AT2G38320 | 32.028 | 281 | 166 | 7 | 3 | 258 | 42 | 322 | 2.50e-44 | 152 |
| MS.gene070181.t1 | AT3G06080 | 34.532 | 278 | 155 | 6 | 3 | 255 | 168 | 443 | 7.54e-44 | 154 |
| MS.gene070181.t1 | AT5G06230 | 34.296 | 277 | 158 | 7 | 3 | 258 | 92 | 365 | 1.45e-43 | 151 |
| MS.gene070181.t1 | AT2G38320 | 32.028 | 281 | 166 | 7 | 3 | 258 | 125 | 405 | 2.07e-43 | 152 |
| MS.gene070181.t1 | AT3G11030 | 33.451 | 284 | 155 | 9 | 3 | 258 | 172 | 449 | 3.17e-43 | 152 |
| MS.gene070181.t1 | AT5G06230 | 34.296 | 277 | 158 | 7 | 3 | 258 | 133 | 406 | 3.75e-43 | 151 |
| MS.gene070181.t1 | AT5G19160 | 33.451 | 284 | 159 | 8 | 3 | 258 | 164 | 445 | 1.52e-42 | 150 |
| MS.gene070181.t1 | AT2G40320 | 32.509 | 283 | 158 | 8 | 3 | 258 | 147 | 423 | 5.40e-42 | 149 |
| MS.gene070181.t1 | AT3G11570 | 34.173 | 278 | 157 | 10 | 3 | 258 | 147 | 420 | 6.34e-41 | 145 |
| MS.gene070181.t1 | AT1G48880 | 33.829 | 269 | 147 | 7 | 3 | 253 | 180 | 435 | 5.22e-39 | 141 |
| MS.gene070181.t1 | AT3G62390 | 38.857 | 175 | 93 | 6 | 1 | 162 | 201 | 374 | 8.23e-30 | 115 |
| MS.gene070181.t1 | AT5G20590 | 32.749 | 171 | 102 | 3 | 3 | 160 | 207 | 377 | 1.90e-25 | 103 |
| MS.gene070181.t1 | AT2G40160 | 31.361 | 169 | 105 | 4 | 3 | 160 | 143 | 311 | 9.77e-25 | 100 |
| MS.gene070181.t1 | AT5G19160 | 32.558 | 172 | 102 | 3 | 3 | 160 | 164 | 335 | 4.89e-24 | 99.4 |
| MS.gene070181.t1 | AT5G64470 | 28.622 | 283 | 169 | 11 | 1 | 258 | 120 | 394 | 9.51e-22 | 93.6 |
| MS.gene070181.t1 | AT2G14530 | 27.241 | 290 | 166 | 10 | 2 | 257 | 128 | 406 | 1.96e-21 | 92.8 |
| MS.gene070181.t1 | AT5G64470 | 28.374 | 289 | 168 | 10 | 1 | 258 | 120 | 400 | 2.47e-21 | 92.4 |
| MS.gene070181.t1 | AT5G06230 | 33.721 | 172 | 98 | 4 | 3 | 159 | 133 | 303 | 3.13e-21 | 90.9 |
| MS.gene070181.t1 | AT3G06080 | 31.977 | 172 | 103 | 3 | 3 | 160 | 168 | 339 | 4.63e-21 | 90.9 |
| MS.gene070181.t1 | AT5G20680 | 26.978 | 278 | 172 | 11 | 3 | 255 | 260 | 531 | 1.33e-18 | 85.1 |
| MS.gene070181.t1 | AT5G64020 | 27.491 | 291 | 170 | 11 | 3 | 257 | 123 | 408 | 1.42e-18 | 84.7 |
| MS.gene070181.t1 | AT5G20680 | 26.978 | 278 | 172 | 11 | 3 | 255 | 278 | 549 | 1.47e-18 | 85.1 |
| MS.gene070181.t1 | AT5G20680 | 26.978 | 278 | 172 | 11 | 3 | 255 | 278 | 549 | 1.47e-18 | 85.1 |
| MS.gene070181.t1 | AT5G20680 | 26.978 | 278 | 172 | 11 | 3 | 255 | 278 | 549 | 1.47e-18 | 85.1 |
| MS.gene070181.t1 | AT5G20680 | 26.978 | 278 | 172 | 11 | 3 | 255 | 278 | 549 | 1.47e-18 | 85.1 |
| MS.gene070181.t1 | AT5G20680 | 26.978 | 278 | 172 | 11 | 3 | 255 | 184 | 455 | 1.52e-18 | 84.7 |
| MS.gene070181.t1 | AT5G15890 | 27.143 | 280 | 166 | 10 | 1 | 253 | 250 | 518 | 1.36e-15 | 76.3 |
| MS.gene070181.t1 | AT5G15900 | 26.335 | 281 | 176 | 9 | 3 | 257 | 134 | 409 | 1.97e-14 | 72.8 |
| MS.gene070181.t1 | AT5G15900 | 26.335 | 281 | 176 | 9 | 3 | 257 | 153 | 428 | 2.34e-14 | 72.4 |
| MS.gene070181.t1 | AT2G37720 | 28.179 | 291 | 156 | 15 | 3 | 257 | 209 | 482 | 9.40e-14 | 70.9 |
| MS.gene070181.t1 | AT4G01080 | 25.899 | 278 | 170 | 10 | 9 | 258 | 162 | 431 | 8.00e-13 | 68.2 |
| MS.gene070181.t1 | AT4G25360 | 26.087 | 299 | 159 | 15 | 1 | 253 | 238 | 520 | 1.47e-12 | 67.4 |
| MS.gene070181.t1 | AT4G25360 | 26.087 | 299 | 159 | 15 | 1 | 253 | 238 | 520 | 1.47e-12 | 67.4 |
| MS.gene070181.t1 | AT5G51640 | 25.338 | 296 | 166 | 12 | 1 | 253 | 201 | 484 | 4.88e-12 | 65.9 |
Find 63 sgRNAs with CRISPR-Local
Find 152 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAATTCCTTTCCAATTTC+TGG | 0.179085 | 3.2:+41850326 | None:intergenic |
| CTATTCAATCTGCCAGAAAT+TGG | 0.256808 | 3.2:-41850338 | MS.gene070181:CDS |
| GATGGTCACCCATCAGTTTA+TGG | 0.263279 | 3.2:-41849159 | MS.gene070181:CDS |
| GTTCTCACGCAATGCGCTTC+TGG | 0.267121 | 3.2:-41850406 | MS.gene070181:CDS |
| ATGTGTTGATATTTGATTCT+TGG | 0.304240 | 3.2:-41850305 | MS.gene070181:CDS |
| TCTAACAGTGAATGTGAAAA+TGG | 0.332160 | 3.2:+41851507 | None:intergenic |
| ATTGAATAGAGTCTAATTTC+AGG | 0.342278 | 3.2:+41850352 | None:intergenic |
| AAAAGCTGATTCCAAGTATC+AGG | 0.342301 | 3.2:+41849084 | None:intergenic |
| TGACATGATTTGCAGACTTA+TGG | 0.362689 | 3.2:-41850441 | MS.gene070181:intron |
| GACATTGTTAGTGAAAATAT+TGG | 0.378386 | 3.2:-41850381 | MS.gene070181:CDS |
| CATTGAAAACATGGGCCAAA+TGG | 0.378510 | 3.2:-41849960 | MS.gene070181:CDS |
| CTTCACAAAAGTTTGCTGTT+GGG | 0.379102 | 3.2:+41849319 | None:intergenic |
| GGATACATGGATCCTGATAA+TGG | 0.391224 | 3.2:+41849285 | None:intergenic |
| ACTCTTTGAGTTTGAATCAA+TGG | 0.394001 | 3.2:-41851603 | MS.gene070181:CDS |
| CCTTCACAAAAGTTTGCTGT+TGG | 0.406070 | 3.2:+41849318 | None:intergenic |
| GATGATCTGGAGAGATTCCT+TGG | 0.413038 | 3.2:+41849896 | None:intergenic |
| AACATTGTCATCAACCCATT+TGG | 0.413736 | 3.2:+41849945 | None:intergenic |
| AATACTTACTTAAGATGATC+TGG | 0.424664 | 3.2:+41849883 | None:intergenic |
| AAAGCCAACTGTGCTGGAAC+TGG | 0.426171 | 3.2:+41849255 | None:intergenic |
| TATTTCCAGCTCAAGGCAAT+GGG | 0.432847 | 3.2:-41849346 | MS.gene070181:intron |
| GAATAACACATTCAGAGATA+TGG | 0.437278 | 3.2:-41850007 | MS.gene070181:CDS |
| CTCTCTAAAGCCAACTGTGC+TGG | 0.439711 | 3.2:+41849249 | None:intergenic |
| TGCAGCCATTGGTGTCTAGC+TGG | 0.453171 | 3.2:-41849111 | MS.gene070181:CDS |
| AACTGGACCTCCTGGATACA+TGG | 0.456004 | 3.2:+41849272 | None:intergenic |
| TGATATTTGATTCTTGGCAT+TGG | 0.464845 | 3.2:-41850299 | MS.gene070181:CDS |
| TAGCTGGTGTTCCTGATACT+TGG | 0.468340 | 3.2:-41849095 | MS.gene070181:CDS |
| TTTGCAGACTTATGGTGTTA+AGG | 0.471271 | 3.2:-41850433 | MS.gene070181:intron |
| ATTGAAAACATGGGCCAAAT+GGG | 0.475975 | 3.2:-41849959 | MS.gene070181:CDS |
| TGTGCTGGAACTGGACCTCC+TGG | 0.478514 | 3.2:+41849264 | None:intergenic |
| CACCCATCAGTTTATGGACA+TGG | 0.508815 | 3.2:-41849153 | MS.gene070181:CDS |
| AACTACACCTTAGTGAGGAT+TGG | 0.516648 | 3.2:-41851538 | MS.gene070181:CDS |
| TTATCACAGCTGAGAAAAGA+TGG | 0.516839 | 3.2:-41849177 | MS.gene070181:CDS |
| TTGTTAGTGAAAATATTGGT+AGG | 0.519394 | 3.2:-41850377 | MS.gene070181:CDS |
| GTAATGTCAAGCAAGTATAC+AGG | 0.523286 | 3.2:+41849204 | None:intergenic |
| ATATTTCCAGCTCAAGGCAA+TGG | 0.526486 | 3.2:-41849347 | MS.gene070181:intron |
| TATTTGATTCTTGGCATTGG+TGG | 0.527974 | 3.2:-41850296 | MS.gene070181:CDS |
| AGATGGGATTTCATTCAAGA+AGG | 0.534284 | 3.2:-41850030 | MS.gene070181:CDS |
| ATGAGAAAGCATTGAAAACA+TGG | 0.535255 | 3.2:-41849969 | MS.gene070181:CDS |
| GGGACATGGATTGCAGCCAT+TGG | 0.548321 | 3.2:-41849122 | MS.gene070181:CDS |
| CTCACGCAATGCGCTTCTGG+TGG | 0.553358 | 3.2:-41850403 | MS.gene070181:CDS |
| TTATCAGGATCCATGTATCC+AGG | 0.553563 | 3.2:-41849282 | MS.gene070181:CDS |
| AGGTCCAGTTCCAGCACAGT+TGG | 0.553722 | 3.2:-41849259 | MS.gene070181:CDS |
| CCTCCATGTCCATAAACTGA+TGG | 0.556684 | 3.2:+41849150 | None:intergenic |
| TTATGGACATGGAGGACATA+GGG | 0.558140 | 3.2:-41849142 | MS.gene070181:CDS |
| GATGGGATTTCATTCAAGAA+GGG | 0.559009 | 3.2:-41850029 | MS.gene070181:CDS |
| GAGATCACCAATCCTCACTA+AGG | 0.570198 | 3.2:+41851531 | None:intergenic |
| ATTTCTTGAGAATGCATAGA+GGG | 0.571736 | 3.2:-41851648 | None:intergenic |
| GATTTCTTGAGAATGCATAG+AGG | 0.574058 | 3.2:-41851649 | None:intergenic |
| TTTATGGACATGGAGGACAT+AGG | 0.578389 | 3.2:-41849143 | MS.gene070181:CDS |
| TGTTAGTGAAAATATTGGTA+GGG | 0.582185 | 3.2:-41850376 | MS.gene070181:CDS |
| TAGCTTGTGGTACAGCTATG+TGG | 0.590974 | 3.2:+41851560 | None:intergenic |
| TGAGAAAGCATTGAAAACAT+GGG | 0.607788 | 3.2:-41849968 | MS.gene070181:CDS |
| CTCCATGTCCATAAACTGAT+GGG | 0.611052 | 3.2:+41849151 | None:intergenic |
| ACTAAGGTGTAGTTAGCTTG+TGG | 0.614706 | 3.2:+41851547 | None:intergenic |
| CAATCTGCCAGAAATTGGAA+AGG | 0.615695 | 3.2:-41850333 | MS.gene070181:CDS |
| TGGCATTGGTGGCTTCACAC+AGG | 0.631401 | 3.2:-41850285 | MS.gene070181:CDS |
| TGTTGATATTACCAAAACAA+AGG | 0.642467 | 3.2:-41849926 | MS.gene070181:CDS |
| GAACACCAGCTAGACACCAA+TGG | 0.667103 | 3.2:+41849106 | None:intergenic |
| ACATGGAGGACATAGGGACA+TGG | 0.684758 | 3.2:-41849136 | MS.gene070181:CDS |
| CCATCAGTTTATGGACATGG+AGG | 0.696347 | 3.2:-41849150 | MS.gene070181:CDS |
| AAGCTAACTACACCTTAGTG+AGG | 0.700717 | 3.2:-41851543 | MS.gene070181:CDS |
| ATTTCCAGCTCAAGGCAATG+GGG | 0.709934 | 3.2:-41849345 | MS.gene070181:intron |
| TCAGGATCCATGTATCCAGG+AGG | 0.744104 | 3.2:-41849279 | MS.gene070181:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAACTTCAAATT+AGG | + | chr3.2:41851030-41851049 | None:intergenic | 10.0% |
| !! | AAATGAAAAAAAAAAAAGTT+AGG | + | chr3.2:41849230-41849249 | None:intergenic | 10.0% |
| !! | TAACTTATTTAATAATAACT+TGG | + | chr3.2:41849716-41849735 | None:intergenic | 10.0% |
| !!! | AACAAATTTTTTTTTTTTGA+AGG | + | chr3.2:41851261-41851280 | None:intergenic | 10.0% |
| !!! | ATTCACTATATATATTTTTA+AGG | - | chr3.2:41850092-41850111 | MS.gene070181:intron | 10.0% |
| !!! | CCAAAAAATTTAAAATAAAT+AGG | + | chr3.2:41851066-41851085 | None:intergenic | 10.0% |
| !!! | CCTATTTATTTTAAATTTTT+TGG | - | chr3.2:41851063-41851082 | MS.gene070181:intron | 10.0% |
| !!! | TCTTTTTTATAAAACATAAT+TGG | - | chr3.2:41849604-41849623 | MS.gene070181:intron | 10.0% |
| !!! | TTATGTTTCTTTTTTTTTTT+TGG | + | chr3.2:41849988-41850007 | None:intergenic | 10.0% |
| !! | AAAGAAACAATTAAATACAT+TGG | + | chr3.2:41849589-41849608 | None:intergenic | 15.0% |
| !! | ATGTTAAAATTATGTTCAAT+AGG | + | chr3.2:41849838-41849857 | None:intergenic | 15.0% |
| !! | GAAATCATTATTAATTAAGA+CGG | - | chr3.2:41849634-41849653 | MS.gene070181:intron | 15.0% |
| !! | TCATTAAATTACTTTCAAAA+TGG | + | chr3.2:41850915-41850934 | None:intergenic | 15.0% |
| !! | TCTTGAACATAATAATAATA+TGG | - | chr3.2:41849860-41849879 | MS.gene070181:intron | 15.0% |
| !! | TTTCAAATAAAATCTTAACT+TGG | - | chr3.2:41850161-41850180 | MS.gene070181:intron | 15.0% |
| !!! | TAAAACTACTTGTTATTTAA+CGG | - | chr3.2:41849421-41849440 | MS.gene070181:intron | 15.0% |
| !! | ATAAAATGAAAAATAGATGG+AGG | - | chr3.2:41849450-41849469 | MS.gene070181:intron | 20.0% |
| !! | ATTAGGATGTAAATTTCTTT+AGG | - | chr3.2:41850883-41850902 | MS.gene070181:intron | 20.0% |
| !! | CACATAAAATGAAAAATAGA+TGG | - | chr3.2:41849447-41849466 | MS.gene070181:intron | 20.0% |
| !! | TTAGGATGTAAATTTCTTTA+GGG | - | chr3.2:41850884-41850903 | MS.gene070181:intron | 20.0% |
| !! | TTATAAAACATAATTGGAGA+AGG | - | chr3.2:41849610-41849629 | MS.gene070181:intron | 20.0% |
| !! | TTCTTTGGATTATCTTATAA+TGG | - | chr3.2:41850475-41850494 | MS.gene070181:intron | 20.0% |
| !!! | AAAATGTTATCTCCTTTTAA+TGG | + | chr3.2:41851226-41851245 | None:intergenic | 20.0% |
| !!! | AACCTCTCATTTTTATTTTT+AGG | - | chr3.2:41850056-41850075 | MS.gene070181:intron | 20.0% |
| !!! | ACCTCTCATTTTTATTTTTA+GGG | - | chr3.2:41850057-41850076 | MS.gene070181:intron | 20.0% |
| !!! | ATCAACATCACTTTTTTTTT+TGG | - | chr3.2:41849370-41849389 | MS.gene070181:intron | 20.0% |
| !!! | ATGTCTATGGATTTTAATTA+CGG | + | chr3.2:41850453-41850472 | None:intergenic | 20.0% |
| !!! | ATTTTATTTGAAAAAGTCTC+TGG | + | chr3.2:41850154-41850173 | None:intergenic | 20.0% |
| !!! | CACTATATATATTTTTAAGG+AGG | - | chr3.2:41850095-41850114 | MS.gene070181:intron | 20.0% |
| !!! | TTATGTTTCTATTTATGTCA+AGG | + | chr3.2:41849955-41849974 | None:intergenic | 20.0% |
| !!! | TTTAAATTTTTTGGGACAAA+AGG | - | chr3.2:41851072-41851091 | MS.gene070181:intron | 20.0% |
| !!! | TTTAGTCTCTAAGAATAAAA+AGG | - | chr3.2:41849768-41849787 | MS.gene070181:intron | 20.0% |
| ! | AAATGTGGATCAAATGAATA+TGG | - | chr3.2:41849533-41849552 | MS.gene070181:intron | 25.0% |
| ! | AATACTTACTTAAGATGATC+TGG | + | chr3.2:41850822-41850841 | None:intergenic | 25.0% |
| ! | ATTGAATAGAGTCTAATTTC+AGG | + | chr3.2:41850353-41850372 | None:intergenic | 25.0% |
| ! | GACATTGTTAGTGAAAATAT+TGG | - | chr3.2:41850321-41850340 | MS.gene070181:CDS | 25.0% |
| ! | GAGATGAAAATTGCATAATT+AGG | - | chr3.2:41850866-41850885 | MS.gene070181:intron | 25.0% |
| ! | GCATGTACAAAATTTAAAAG+TGG | + | chr3.2:41851003-41851022 | None:intergenic | 25.0% |
| ! | TCATTTGATCCACATTTATT+AGG | + | chr3.2:41849530-41849549 | None:intergenic | 25.0% |
| ! | TCCCTAAAAATAAAAATGAG+AGG | + | chr3.2:41850061-41850080 | None:intergenic | 25.0% |
| ! | TGTTAGTGAAAATATTGGTA+GGG | - | chr3.2:41850326-41850345 | MS.gene070181:CDS | 25.0% |
| ! | TGTTGATATTACCAAAACAA+AGG | - | chr3.2:41850776-41850795 | MS.gene070181:intron | 25.0% |
| ! | TTGTCCATTTGTAATAATGT+GGG | + | chr3.2:41850548-41850567 | None:intergenic | 25.0% |
| ! | TTGTTAGTGAAAATATTGGT+AGG | - | chr3.2:41850325-41850344 | MS.gene070181:CDS | 25.0% |
| ! | TTTGTCCATTTGTAATAATG+TGG | + | chr3.2:41850549-41850568 | None:intergenic | 25.0% |
| !! | AATGGTAAAAGTACAACAAT+GGG | + | chr3.2:41851208-41851227 | None:intergenic | 25.0% |
| !! | ATGTGTTGATATTTGATTCT+TGG | - | chr3.2:41850397-41850416 | MS.gene070181:CDS | 25.0% |
| !! | GTTGTACTTTTACCATTAAA+AGG | - | chr3.2:41851211-41851230 | MS.gene070181:intron | 25.0% |
| !! | TAATGGTAAAAGTACAACAA+TGG | + | chr3.2:41851209-41851228 | None:intergenic | 25.0% |
| !! | TTAACTTGGAGTTCATTTAT+TGG | - | chr3.2:41850175-41850194 | MS.gene070181:intron | 25.0% |
| !! | TTATGATAATGAGACAGAAT+TGG | + | chr3.2:41849264-41849283 | None:intergenic | 25.0% |
| !!! | ACTTGTTATCCTAATAAATG+TGG | - | chr3.2:41849518-41849537 | MS.gene070181:intron | 25.0% |
| !!! | CTGGTTGAAGTTTTAATTTA+GGG | + | chr3.2:41850135-41850154 | None:intergenic | 25.0% |
| !!! | GAAAAGTATTTTGTTTGTTG+GGG | - | chr3.2:41849076-41849095 | MS.gene070181:CDS | 25.0% |
| !!! | GGAAAAGTATTTTGTTTGTT+GGG | - | chr3.2:41849075-41849094 | MS.gene070181:CDS | 25.0% |
| !!! | TCTGGTTGAAGTTTTAATTT+AGG | + | chr3.2:41850136-41850155 | None:intergenic | 25.0% |
| AACTCCCACATTATTACAAA+TGG | - | chr3.2:41850541-41850560 | MS.gene070181:intron | 30.0% | |
| AATCCAAAGAAGAATGTCTA+TGG | + | chr3.2:41850466-41850485 | None:intergenic | 30.0% | |
| AATCCATAGACATTCTTCTT+TGG | - | chr3.2:41850460-41850479 | MS.gene070181:intron | 30.0% | |
| ACAAAAGGATCCTTTCAATA+TGG | - | chr3.2:41851087-41851106 | MS.gene070181:intron | 30.0% | |
| AGAAACATAAATTCGACATC+AGG | - | chr3.2:41849998-41850017 | MS.gene070181:CDS | 30.0% | |
| ATCAATATTGTGTATGCAGA+TGG | - | chr3.2:41850655-41850674 | MS.gene070181:intron | 30.0% | |
| ATCAATTCCTTTCCAATTTC+TGG | + | chr3.2:41850379-41850398 | None:intergenic | 30.0% | |
| CAAAAGGATCCTTTCAATAT+GGG | - | chr3.2:41851088-41851107 | MS.gene070181:intron | 30.0% | |
| GAAACATAAATTCGACATCA+GGG | - | chr3.2:41849999-41850018 | MS.gene070181:CDS | 30.0% | |
| GAATAACACATTCAGAGATA+TGG | - | chr3.2:41850695-41850714 | MS.gene070181:intron | 30.0% | |
| TAATATGGACATACATGAGT+CGG | - | chr3.2:41849875-41849894 | MS.gene070181:intron | 30.0% | |
| TCAATATTGTGTATGCAGAT+GGG | - | chr3.2:41850656-41850675 | MS.gene070181:intron | 30.0% | |
| TCTAACAGTGAATGTGAAAA+TGG | + | chr3.2:41849198-41849217 | None:intergenic | 30.0% | |
| TCTTATTATACCCTCACATT+TGG | - | chr3.2:41850512-41850531 | MS.gene070181:intron | 30.0% | |
| TGATATTTGATTCTTGGCAT+TGG | - | chr3.2:41850403-41850422 | MS.gene070181:CDS | 30.0% | |
| TGTTATTGGACAAATCTTCT+CGG | + | chr3.2:41849685-41849704 | None:intergenic | 30.0% | |
| TTCAAAATATTTCCAGCTCA+AGG | - | chr3.2:41851349-41851368 | MS.gene070181:intron | 30.0% | |
| TTGTAATAATGTGGGAGTTA+GGG | + | chr3.2:41850540-41850559 | None:intergenic | 30.0% | |
| TTTGTAATAATGTGGGAGTT+AGG | + | chr3.2:41850541-41850560 | None:intergenic | 30.0% | |
| ! | AAAACAAAGGTCTTTTTCCA+AGG | - | chr3.2:41850789-41850808 | MS.gene070181:intron | 30.0% |
| ! | ACTCTTTGAGTTTGAATCAA+TGG | - | chr3.2:41849099-41849118 | MS.gene070181:CDS | 30.0% |
| ! | TGAATATGGTCTCTTTTACA+TGG | - | chr3.2:41849547-41849566 | MS.gene070181:intron | 30.0% |
| !! | ATGAGAAAGCATTGAAAACA+TGG | - | chr3.2:41850733-41850752 | MS.gene070181:intron | 30.0% |
| !! | TGAGAAAGCATTGAAAACAT+GGG | - | chr3.2:41850734-41850753 | MS.gene070181:intron | 30.0% |
| !! | TTGGAAAAAGACCTTTGTTT+TGG | + | chr3.2:41850790-41850809 | None:intergenic | 30.0% |
| !!! | GGGAAAAGTATTTTGTTTGT+TGG | - | chr3.2:41849074-41849093 | MS.gene070181:CDS | 30.0% |
| AAAGTAGAGCCCATATTGAA+AGG | + | chr3.2:41851100-41851119 | None:intergenic | 35.0% | |
| AACATTGTCATCAACCCATT+TGG | + | chr3.2:41850760-41850779 | None:intergenic | 35.0% | |
| ACTTGGCACTACAATGTTAT+TGG | + | chr3.2:41849699-41849718 | None:intergenic | 35.0% | |
| AGATGGGATTTCATTCAAGA+AGG | - | chr3.2:41850672-41850691 | MS.gene070181:intron | 35.0% | |
| ATTGAAAACATGGGCCAAAT+GGG | - | chr3.2:41850743-41850762 | MS.gene070181:intron | 35.0% | |
| CAATTATTTGAGCTAGCTCA+TGG | - | chr3.2:41849330-41849349 | MS.gene070181:CDS | 35.0% | |
| CTATTCAATCTGCCAGAAAT+TGG | - | chr3.2:41850364-41850383 | MS.gene070181:CDS | 35.0% | |
| CTGCAAATCATGTCATAGAA+AGG | + | chr3.2:41850256-41850275 | None:intergenic | 35.0% | |
| GAGCTAGCTCAAATAATTGA+GGG | + | chr3.2:41849329-41849348 | None:intergenic | 35.0% | |
| GATAATGAGACAGAATTGGA+AGG | + | chr3.2:41849260-41849279 | None:intergenic | 35.0% | |
| GATGGGATTTCATTCAAGAA+GGG | - | chr3.2:41850673-41850692 | MS.gene070181:intron | 35.0% | |
| GGAAAAAATGTTGATGTGAG+AGG | - | chr3.2:41850587-41850606 | MS.gene070181:intron | 35.0% | |
| GGACAAGAAAAACCATTATC+AGG | - | chr3.2:41851405-41851424 | MS.gene070181:intron | 35.0% | |
| GTAATGTCAAGCAAGTATAC+AGG | + | chr3.2:41851501-41851520 | None:intergenic | 35.0% | |
| GTTATTGGACAAATCTTCTC+GGG | + | chr3.2:41849684-41849703 | None:intergenic | 35.0% | |
| TAGGATAACAAGTTGTCTCA+TGG | + | chr3.2:41849511-41849530 | None:intergenic | 35.0% | |
| TGAGCTAGCTCAAATAATTG+AGG | + | chr3.2:41849330-41849349 | None:intergenic | 35.0% | |
| TGTAATAATGTGGGAGTTAG+GGG | + | chr3.2:41850539-41850558 | None:intergenic | 35.0% | |
| TTATCACAGCTGAGAAAAGA+TGG | - | chr3.2:41851525-41851544 | MS.gene070181:CDS | 35.0% | |
| ! | AAAAGCTGATTCCAAGTATC+AGG | + | chr3.2:41851621-41851640 | None:intergenic | 35.0% |
| ! | TATTTGATTCTTGGCATTGG+TGG | - | chr3.2:41850406-41850425 | MS.gene070181:CDS | 35.0% |
| ! | TGACATGATTTGCAGACTTA+TGG | - | chr3.2:41850261-41850280 | MS.gene070181:intron | 35.0% |
| ! | TGTTTTCCATATTCTGCAAC+TGG | + | chr3.2:41850614-41850633 | None:intergenic | 35.0% |
| ! | TTTGCAGACTTATGGTGTTA+AGG | - | chr3.2:41850269-41850288 | MS.gene070181:intron | 35.0% |
| ! | TTTTCTCAGCTGTGATAAAG+TGG | + | chr3.2:41851523-41851542 | None:intergenic | 35.0% |
| !! | CTTCACAAAAGTTTGCTGTT+GGG | + | chr3.2:41851386-41851405 | None:intergenic | 35.0% |
| !!! | CAAGTATACAGGCTTTTTCA+TGG | + | chr3.2:41851490-41851509 | None:intergenic | 35.0% |
| AACTACACCTTAGTGAGGAT+TGG | - | chr3.2:41849164-41849183 | MS.gene070181:CDS | 40.0% | |
| AAGCTAACTACACCTTAGTG+AGG | - | chr3.2:41849159-41849178 | MS.gene070181:CDS | 40.0% | |
| ATATTTCCAGCTCAAGGCAA+TGG | - | chr3.2:41851355-41851374 | MS.gene070181:intron | 40.0% | |
| CAATCTGCCAGAAATTGGAA+AGG | - | chr3.2:41850369-41850388 | MS.gene070181:CDS | 40.0% | |
| CATTGAAAACATGGGCCAAA+TGG | - | chr3.2:41850742-41850761 | MS.gene070181:intron | 40.0% | |
| CTCCATGTCCATAAACTGAT+GGG | + | chr3.2:41851554-41851573 | None:intergenic | 40.0% | |
| GGATACATGGATCCTGATAA+TGG | + | chr3.2:41851420-41851439 | None:intergenic | 40.0% | |
| TATTTCCAGCTCAAGGCAAT+GGG | - | chr3.2:41851356-41851375 | MS.gene070181:intron | 40.0% | |
| TTATCAGGATCCATGTATCC+AGG | - | chr3.2:41851420-41851439 | MS.gene070181:intron | 40.0% | |
| TTATGGACATGGAGGACATA+GGG | - | chr3.2:41851560-41851579 | MS.gene070181:CDS | 40.0% | |
| TTGTCTCATGGTTTGATGTG+TGG | + | chr3.2:41849499-41849518 | None:intergenic | 40.0% | |
| TTTATGGACATGGAGGACAT+AGG | - | chr3.2:41851559-41851578 | MS.gene070181:CDS | 40.0% | |
| ! | ACTAAGGTGTAGTTAGCTTG+TGG | + | chr3.2:41849158-41849177 | None:intergenic | 40.0% |
| ! | CCAACAGCAAACTTTTGTGA+AGG | - | chr3.2:41851384-41851403 | MS.gene070181:intron | 40.0% |
| !! | CCTTCACAAAAGTTTGCTGT+TGG | + | chr3.2:41851387-41851406 | None:intergenic | 40.0% |
| AGAGGACCAGTTGCAGAATA+TGG | - | chr3.2:41850605-41850624 | MS.gene070181:intron | 45.0% | |
| AGTTAGGGGACCAAATGTGA+GGG | + | chr3.2:41850525-41850544 | None:intergenic | 45.0% | |
| ATTTCCAGCTCAAGGCAATG+GGG | - | chr3.2:41851357-41851376 | MS.gene070181:intron | 45.0% | |
| CACCCATCAGTTTATGGACA+TGG | - | chr3.2:41851549-41851568 | MS.gene070181:CDS | 45.0% | |
| CCATCAGTTTATGGACATGG+AGG | - | chr3.2:41851552-41851571 | MS.gene070181:CDS | 45.0% | |
| CCTCCATGTCCATAAACTGA+TGG | + | chr3.2:41851555-41851574 | None:intergenic | 45.0% | |
| GAGATCACCAATCCTCACTA+AGG | + | chr3.2:41849174-41849193 | None:intergenic | 45.0% | |
| GATGATCTGGAGAGATTCCT+TGG | + | chr3.2:41850809-41850828 | None:intergenic | 45.0% | |
| GATGGTCACCCATCAGTTTA+TGG | - | chr3.2:41851543-41851562 | MS.gene070181:CDS | 45.0% | |
| TAGCTGGTGTTCCTGATACT+TGG | - | chr3.2:41851607-41851626 | MS.gene070181:CDS | 45.0% | |
| ! | TAGCTTGTGGTACAGCTATG+TGG | + | chr3.2:41849145-41849164 | None:intergenic | 45.0% |
| !!! | AAAAATACTTATATATTTTT+TGG | - | chr3.2:41850566-41850585 | MS.gene070181:intron | 5.0% |
| !!! | CTATTTATTTTAAATTTTTT+GGG | - | chr3.2:41851064-41851083 | MS.gene070181:intron | 5.0% |
| AAAGCCAACTGTGCTGGAAC+TGG | + | chr3.2:41851450-41851469 | None:intergenic | 50.0% | |
| AACTGGACCTCCTGGATACA+TGG | + | chr3.2:41851433-41851452 | None:intergenic | 50.0% | |
| ACATGGAGGACATAGGGACA+TGG | - | chr3.2:41851566-41851585 | MS.gene070181:CDS | 50.0% | |
| GAACACCAGCTAGACACCAA+TGG | + | chr3.2:41851599-41851618 | None:intergenic | 50.0% | |
| GAGTTAGGGGACCAAATGTG+AGG | + | chr3.2:41850526-41850545 | None:intergenic | 50.0% | |
| TCAGGATCCATGTATCCAGG+AGG | - | chr3.2:41851423-41851442 | MS.gene070181:intron | 50.0% | |
| !! | CTCTCTAAAGCCAACTGTGC+TGG | + | chr3.2:41851456-41851475 | None:intergenic | 50.0% |
| AGGTCCAGTTCCAGCACAGT+TGG | - | chr3.2:41851443-41851462 | MS.gene070181:intron | 55.0% | |
| GTTCTCACGCAATGCGCTTC+TGG | - | chr3.2:41850296-41850315 | MS.gene070181:CDS | 55.0% | |
| ! | GGGACATGGATTGCAGCCAT+TGG | - | chr3.2:41851580-41851599 | MS.gene070181:CDS | 55.0% |
| ! | TGCAGCCATTGGTGTCTAGC+TGG | - | chr3.2:41851591-41851610 | MS.gene070181:CDS | 55.0% |
| !! | TGGCATTGGTGGCTTCACAC+AGG | - | chr3.2:41850417-41850436 | MS.gene070181:CDS | 55.0% |
| CTCACGCAATGCGCTTCTGG+TGG | - | chr3.2:41850299-41850318 | MS.gene070181:CDS | 60.0% | |
| GTCTCCCCATTGCCTTGAGC+TGG | + | chr3.2:41851364-41851383 | None:intergenic | 60.0% | |
| TGTGCTGGAACTGGACCTCC+TGG | + | chr3.2:41851441-41851460 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 41849065 | 41851659 | 41849065 | ID=MS.gene070181 |
| chr3.2 | mRNA | 41849065 | 41851659 | 41849065 | ID=MS.gene070181.t1;Parent=MS.gene070181 |
| chr3.2 | exon | 41851513 | 41851659 | 41851513 | ID=MS.gene070181.t1.exon1;Parent=MS.gene070181.t1 |
| chr3.2 | CDS | 41851513 | 41851659 | 41851513 | ID=cds.MS.gene070181.t1;Parent=MS.gene070181.t1 |
| chr3.2 | exon | 41850273 | 41850448 | 41850273 | ID=MS.gene070181.t1.exon2;Parent=MS.gene070181.t1 |
| chr3.2 | CDS | 41850273 | 41850448 | 41850273 | ID=cds.MS.gene070181.t1;Parent=MS.gene070181.t1 |
| chr3.2 | exon | 41849892 | 41850050 | 41849892 | ID=MS.gene070181.t1.exon3;Parent=MS.gene070181.t1 |
| chr3.2 | CDS | 41849892 | 41850050 | 41849892 | ID=cds.MS.gene070181.t1;Parent=MS.gene070181.t1 |
| chr3.2 | exon | 41849065 | 41849359 | 41849065 | ID=MS.gene070181.t1.exon4;Parent=MS.gene070181.t1 |
| chr3.2 | CDS | 41849065 | 41849359 | 41849065 | ID=cds.MS.gene070181.t1;Parent=MS.gene070181.t1 |
| Gene Sequence |
| Protein sequence |
