Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030076.t1 | XP_003617470.1 | 96.1 | 511 | 19 | 1 | 1 | 511 | 1 | 510 | 5.40E-280 | 973 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030076.t1 | P49299 | 79.0 | 514 | 103 | 3 | 1 | 509 | 1 | 514 | 2.2e-234 | 812.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030076.t1 | G7K3F1 | 96.1 | 511 | 19 | 1 | 1 | 511 | 1 | 510 | 3.9e-280 | 973.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene030076 | MS.gene030781 | PPI |
| MS.gene030076 | MS.gene52387 | PPI |
| MS.gene004536 | MS.gene030076 | PPI |
| MS.gene030076 | MS.gene84175 | PPI |
| MS.gene030076 | MS.gene94677 | PPI |
| MS.gene030076 | MS.gene00278 | PPI |
| MS.gene030076 | MS.gene68895 | PPI |
| MS.gene28100 | MS.gene030076 | PPI |
| MS.gene030076 | MS.gene57427 | PPI |
| MS.gene030076 | MS.gene95617 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030076.t1 | MTR_5g091930 | 96.086 | 511 | 19 | 1 | 1 | 511 | 1 | 510 | 0.0 | 1010 |
| MS.gene030076.t1 | MTR_3g048920 | 84.462 | 502 | 68 | 3 | 15 | 509 | 18 | 516 | 0.0 | 881 |
| MS.gene030076.t1 | MTR_2g061630 | 27.132 | 387 | 238 | 16 | 110 | 469 | 90 | 459 | 4.15e-27 | 114 |
| MS.gene030076.t1 | MTR_2g061630 | 28.099 | 242 | 151 | 9 | 110 | 338 | 90 | 321 | 3.77e-16 | 80.1 |
| MS.gene030076.t1 | MTR_3g051920 | 52.113 | 71 | 32 | 1 | 15 | 83 | 20 | 90 | 1.17e-13 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030076.t1 | AT2G42790 | 79.960 | 499 | 97 | 1 | 14 | 509 | 9 | 507 | 0.0 | 836 |
| MS.gene030076.t1 | AT3G58750 | 78.728 | 503 | 100 | 2 | 14 | 509 | 9 | 511 | 0.0 | 830 |
| MS.gene030076.t1 | AT3G58740 | 69.345 | 473 | 139 | 2 | 14 | 484 | 9 | 477 | 0.0 | 691 |
| MS.gene030076.t1 | AT3G60100 | 27.820 | 399 | 247 | 14 | 110 | 483 | 87 | 469 | 2.59e-31 | 126 |
| MS.gene030076.t1 | AT3G60100 | 27.820 | 399 | 242 | 15 | 110 | 483 | 87 | 464 | 9.70e-30 | 122 |
| MS.gene030076.t1 | AT2G44350 | 26.718 | 393 | 250 | 13 | 110 | 479 | 91 | 468 | 3.67e-27 | 114 |
| MS.gene030076.t1 | AT2G44350 | 26.718 | 393 | 250 | 13 | 110 | 479 | 91 | 468 | 3.67e-27 | 114 |
| MS.gene030076.t1 | AT2G44350 | 26.718 | 393 | 250 | 13 | 110 | 479 | 90 | 467 | 3.96e-27 | 114 |
| MS.gene030076.t1 | AT2G44350 | 26.718 | 393 | 250 | 13 | 110 | 479 | 90 | 467 | 3.96e-27 | 114 |
| MS.gene030076.t1 | AT3G60100 | 26.744 | 344 | 218 | 10 | 110 | 431 | 87 | 418 | 2.13e-24 | 105 |
Find 136 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTACTCTGGATTAATTTAT+AGG | 0.168114 | 5.2:+77770962 | MS.gene030076:CDS |
| AAACGAAAGCTCTCTGGTTT+TGG | 0.240351 | 5.2:+77770666 | MS.gene030076:CDS |
| TTCTCTGCCAACTCCTCAAT+TGG | 0.255628 | 5.2:-77768406 | None:intergenic |
| AAACAAATAGCTCGGATTAT+TGG | 0.264632 | 5.2:+77769635 | MS.gene030076:CDS |
| TTGACACCTTCAATGAATTC+TGG | 0.265146 | 5.2:-77770484 | None:intergenic |
| GCCTCAAAACGGCGACTTGC+TGG | 0.279073 | 5.2:+77771408 | MS.gene030076:CDS |
| CCAAATGTTGACTTCTACTC+TGG | 0.293911 | 5.2:+77770949 | MS.gene030076:CDS |
| AGCTGTTCCACAAGGAGTTT+TGG | 0.322976 | 5.2:+77768875 | MS.gene030076:CDS |
| GGTCTCATAATCTTTGTATC+AGG | 0.327095 | 5.2:-77771181 | None:intergenic |
| TTGAACTTGGTATTTCTTGC+CGG | 0.342857 | 5.2:-77767393 | None:intergenic |
| ATCGGTGGATTGCTCGTTGC+CGG | 0.352833 | 5.2:-77767288 | None:intergenic |
| GGGGCTGTTGGAGCTCTATA+TGG | 0.363641 | 5.2:+77770255 | MS.gene030076:CDS |
| TAACTAATTGTTGATCTAAC+AGG | 0.366204 | 5.2:-77768343 | None:intergenic |
| TATTCAGGTTGCAGTTGCTT+TGG | 0.367490 | 5.2:+77770879 | MS.gene030076:intron |
| CCATTCAGCTAACTGACTTT+CGG | 0.378642 | 5.2:-77768829 | None:intergenic |
| GAGACTATCCTTTGCTTGAT+TGG | 0.381252 | 5.2:-77771345 | None:intergenic |
| TTTGCTATCCCTCGAATGGC+TGG | 0.387625 | 5.2:+77771124 | MS.gene030076:CDS |
| GCTCTATATGGACCTCTTCA+TGG | 0.390267 | 5.2:+77770267 | MS.gene030076:CDS |
| GGGGAGAAGGTGAGCTGAGA+GGG | 0.395974 | 5.2:-77767264 | None:intergenic |
| AAAGACAGAAAGAGCACTTA+TGG | 0.402020 | 5.2:-77769417 | None:intergenic |
| GCCTCATGATGCACATCCTA+TGG | 0.402913 | 5.2:+77769379 | MS.gene030076:CDS |
| CCAGAGTAGAAGTCAACATT+TGG | 0.408985 | 5.2:-77770949 | None:intergenic |
| GATGTATATACTGCTATTGC+CGG | 0.422835 | 5.2:+77770234 | MS.gene030076:CDS |
| GCACGAGTTAGCTGAGGATT+GGG | 0.430827 | 5.2:-77770052 | None:intergenic |
| GTCACATTGGAGAGAGTCCT+TGG | 0.441196 | 5.2:+77771153 | MS.gene030076:CDS |
| AGTTCTCTGTGTAAGATAGT+TGG | 0.443154 | 5.2:-77769885 | None:intergenic |
| TCCAGGAAACGAAAGCTCTC+TGG | 0.445819 | 5.2:+77770660 | MS.gene030076:intron |
| TCATTTCATGTTCTGCGTGC+AGG | 0.447909 | 5.2:-77770093 | None:intergenic |
| ACCATTGTTGATGAGAGAAC+CGG | 0.450167 | 5.2:+77767374 | MS.gene030076:CDS |
| ACTGCTATTGCCGGGGCTGT+TGG | 0.450453 | 5.2:+77770243 | MS.gene030076:CDS |
| TGCACGAGTTAGCTGAGGAT+TGG | 0.451312 | 5.2:-77770053 | None:intergenic |
| AGTTATATTGACGGTGATGA+AGG | 0.455264 | 5.2:+77768361 | MS.gene030076:CDS |
| TCACCGCTGGCCAACTTCAA+TGG | 0.456895 | 5.2:+77767344 | MS.gene030076:CDS |
| TCTCTGCCAACTCCTCAATT+GGG | 0.457866 | 5.2:-77768405 | None:intergenic |
| TCTCTCATCAACAATGGTTA+AGG | 0.458283 | 5.2:-77767369 | None:intergenic |
| GTGGCTTTGACAGTGCCATC+TGG | 0.460578 | 5.2:-77767422 | None:intergenic |
| TGGATAAACACCTCAATAAG+AGG | 0.464282 | 5.2:-77770774 | None:intergenic |
| AAAGATTATGAGACCTCAAC+AGG | 0.469186 | 5.2:+77771189 | MS.gene030076:CDS |
| GTTCTCTGTGTAAGATAGTT+GGG | 0.469788 | 5.2:-77769884 | None:intergenic |
| AACATTCCAGAATTCATTGA+AGG | 0.471243 | 5.2:+77770478 | MS.gene030076:CDS |
| TGCTGCAGTTTATCTTAGAA+TGG | 0.476134 | 5.2:+77769834 | MS.gene030076:CDS |
| TTTATATCGGAGAATGGTTA+CGG | 0.476536 | 5.2:+77771313 | MS.gene030076:CDS |
| TCTTTACTTACTTGGAGAGC+AGG | 0.477199 | 5.2:-77769455 | None:intergenic |
| TTTAGGTTTATATCGGAGAA+TGG | 0.479397 | 5.2:+77771307 | MS.gene030076:intron |
| AGGCTACCCAATTGAGGAGT+TGG | 0.480404 | 5.2:+77768399 | MS.gene030076:CDS |
| TGGCCGGGATCCTCTTATTG+AGG | 0.483981 | 5.2:+77770764 | MS.gene030076:CDS |
| TCAACAATTAGTTATATTGA+CGG | 0.485200 | 5.2:+77768352 | MS.gene030076:CDS |
| GCAGTTTATCTTAGAATGGC+AGG | 0.489562 | 5.2:+77769838 | MS.gene030076:CDS |
| GTCTATCTGCAGATATCGAC+TGG | 0.491411 | 5.2:+77768268 | MS.gene030076:intron |
| ATGTATATACTGCTATTGCC+GGG | 0.492787 | 5.2:+77770235 | MS.gene030076:CDS |
| GTTATCTTGTTTCAGTGGTG+TGG | 0.492804 | 5.2:+77770212 | MS.gene030076:intron |
| GGTTAAGGTGCCATTGAAGT+TGG | 0.493529 | 5.2:-77767354 | None:intergenic |
| TGGAGAGCAGGATTTGCATC+GGG | 0.502431 | 5.2:-77769443 | None:intergenic |
| CCGAAAGTCAGTTAGCTGAA+TGG | 0.505009 | 5.2:+77768829 | MS.gene030076:CDS |
| TTTATTTGCTATCCCTCGAA+TGG | 0.506179 | 5.2:+77771120 | MS.gene030076:CDS |
| GGACTCAAGTTATATGATCC+TGG | 0.509144 | 5.2:+77768304 | MS.gene030076:CDS |
| GAGGATTGGGTTTATATGAC+CGG | 0.510515 | 5.2:-77770039 | None:intergenic |
| CTAAGACAGGGTGAAGGATG+AGG | 0.511504 | 5.2:-77767316 | None:intergenic |
| TGCGTGCTTTCAGAGGCAAC+CGG | 0.518554 | 5.2:+77770020 | MS.gene030076:intron |
| GCTCGTTGCCGGAGGGGAGA+AGG | 0.519774 | 5.2:-77767277 | None:intergenic |
| AGCGGTGATTGAGCTAAGAC+AGG | 0.520836 | 5.2:-77767329 | None:intergenic |
| GGTTGCAGTTGCTTTGGAGA+AGG | 0.523130 | 5.2:+77770885 | MS.gene030076:intron |
| TCAAGTGATGCTGACAAGCT+TGG | 0.523901 | 5.2:+77771366 | MS.gene030076:CDS |
| AAATAAAACTGTGAAATACT+CGG | 0.523937 | 5.2:-77771104 | None:intergenic |
| AATTTATGCAATCAGCGCCA+TGG | 0.526733 | 5.2:+77771072 | MS.gene030076:intron |
| CTGTCCGACACCTTGCATCA+AGG | 0.529086 | 5.2:+77770131 | MS.gene030076:CDS |
| AACGGCGACTTGCTGGATCT+AGG | 0.529882 | 5.2:+77771415 | MS.gene030076:CDS |
| GACAAGTACCCAGCCATTCG+AGG | 0.530448 | 5.2:-77771133 | None:intergenic |
| AGTTGGGTGGATGGAAGCAC+AGG | 0.531460 | 5.2:-77769868 | None:intergenic |
| TTGCTATCCCTCGAATGGCT+GGG | 0.532404 | 5.2:+77771125 | MS.gene030076:CDS |
| GTGTAAGATAGTTGGGTGGA+TGG | 0.535241 | 5.2:-77769877 | None:intergenic |
| ATTTATGCAATCAGCGCCAT+GGG | 0.536822 | 5.2:+77771073 | MS.gene030076:intron |
| AAGAGGATCCCGGCCAACAA+TGG | 0.538019 | 5.2:-77770757 | None:intergenic |
| TCTTCATGGTGGAGCTAATG+AGG | 0.538932 | 5.2:+77770281 | MS.gene030076:CDS |
| TCAGCTCACCTTCTCCCCTC+CGG | 0.539100 | 5.2:+77767269 | MS.gene030076:CDS |
| CGAGCAAGGGAGAGTACCGC+TGG | 0.539940 | 5.2:-77767233 | None:intergenic |
| CATCTGGAGAAACTTGAACT+TGG | 0.541125 | 5.2:-77767406 | None:intergenic |
| GTGGATTGCTCGTTGCCGGA+GGG | 0.544049 | 5.2:-77767284 | None:intergenic |
| TTCAGCTAACTGACTTTCGG+TGG | 0.548613 | 5.2:-77768826 | None:intergenic |
| GGAGCTGTGTTTAAATAGCC+AGG | 0.548764 | 5.2:-77768322 | None:intergenic |
| TTGGAGAGCAGGATTTGCAT+CGG | 0.551066 | 5.2:-77769444 | None:intergenic |
| AGAAAGGAAATTACCTGTTG+AGG | 0.556422 | 5.2:-77771202 | None:intergenic |
| CAAGTTCAAGTTTCTCCAGA+TGG | 0.556908 | 5.2:+77767407 | MS.gene030076:CDS |
| CTGATGAATATTTCATCAAG+AGG | 0.557760 | 5.2:+77770917 | MS.gene030076:CDS |
| GAGAAGGTGAGCTGAGAGGG+TGG | 0.559936 | 5.2:-77767261 | None:intergenic |
| AAACTCACCAAAACTCCTTG+TGG | 0.560805 | 5.2:-77768882 | None:intergenic |
| GTGAAGGATGAGGAGGTGAT+CGG | 0.562348 | 5.2:-77767306 | None:intergenic |
| CCATATCAAATGCCTCAAAA+CGG | 0.562358 | 5.2:+77771397 | MS.gene030076:CDS |
| AATAAAACTGTGAAATACTC+GGG | 0.568227 | 5.2:-77771103 | None:intergenic |
| GGTGGATTGCTCGTTGCCGG+AGG | 0.568739 | 5.2:-77767285 | None:intergenic |
| GTTATATTGACGGTGATGAA+GGG | 0.570128 | 5.2:+77768362 | MS.gene030076:CDS |
| AATAGCTCGGATTATTGGAA+AGG | 0.575815 | 5.2:+77769640 | MS.gene030076:CDS |
| TCTTGATATTTACAACTCAA+AGG | 0.578497 | 5.2:+77769601 | MS.gene030076:CDS |
| ATATAGAGCTCCAACAGCCC+CGG | 0.578865 | 5.2:-77770253 | None:intergenic |
| AGAGGGTGGCTAAACGAGCA+AGG | 0.581190 | 5.2:-77767247 | None:intergenic |
| AAACTATGATCCCAGGGCAA+AGG | 0.582529 | 5.2:+77770704 | MS.gene030076:CDS |
| TGAGAGACAAACAAATAGCT+CGG | 0.583417 | 5.2:+77769627 | MS.gene030076:CDS |
| TGTCTTAGCTCAATCACCGC+TGG | 0.583685 | 5.2:+77767331 | MS.gene030076:CDS |
| AAGGATGAGGAGGTGATCGG+TGG | 0.587249 | 5.2:-77767303 | None:intergenic |
| ATACAGAGGCTACCCAATTG+AGG | 0.592671 | 5.2:+77768393 | MS.gene030076:CDS |
| AAAATGAATACCTTGATGCA+AGG | 0.592875 | 5.2:-77770141 | None:intergenic |
| TGGCTGGGTACTTGTCACAT+TGG | 0.599008 | 5.2:+77771140 | MS.gene030076:CDS |
| CAAAGCCACTGATCTCAAGA+AGG | 0.599526 | 5.2:+77767436 | MS.gene030076:CDS |
| AGGGGAGAAGGTGAGCTGAG+AGG | 0.600766 | 5.2:-77767265 | None:intergenic |
| CAGCATTCAGCTGTTCCACA+AGG | 0.604429 | 5.2:+77768867 | MS.gene030076:CDS |
| ACACCTCAATAAGAGGATCC+CGG | 0.606800 | 5.2:-77770767 | None:intergenic |
| GCCGGTTCTCTCATCAACAA+TGG | 0.606987 | 5.2:-77767375 | None:intergenic |
| TCATTGAAGGTGTCAAAACC+AGG | 0.607983 | 5.2:+77770491 | MS.gene030076:CDS |
| TCATTAGCTCCACCATGAAG+AGG | 0.611745 | 5.2:-77770279 | None:intergenic |
| TCAGCTAACTGACTTTCGGT+GGG | 0.613735 | 5.2:-77768825 | None:intergenic |
| ATTATACGCCAATCAAGCAA+AGG | 0.618602 | 5.2:+77771337 | MS.gene030076:CDS |
| GCATTCACAAGGACACCCAT+AGG | 0.619076 | 5.2:-77769395 | None:intergenic |
| AACTACCTTCTTGAGATCAG+TGG | 0.619966 | 5.2:-77767441 | None:intergenic |
| ACAAGTACCCAGCCATTCGA+GGG | 0.620344 | 5.2:-77771132 | None:intergenic |
| CCTCATGATGCACATCCTAT+GGG | 0.621507 | 5.2:+77769380 | MS.gene030076:CDS |
| TGGGTGGATGGAAGCACAGG+AGG | 0.622383 | 5.2:-77769865 | None:intergenic |
| AATACCTTGATGCAAGGTGT+CGG | 0.625696 | 5.2:-77770135 | None:intergenic |
| CTTTGTATCAGGATCATCCA+AGG | 0.628215 | 5.2:-77771170 | None:intergenic |
| TTTATCTTAGAATGGCAGGA+AGG | 0.631134 | 5.2:+77769842 | MS.gene030076:CDS |
| TGGATTGCTCGTTGCCGGAG+GGG | 0.631504 | 5.2:-77767283 | None:intergenic |
| GAGGGTGGCTAAACGAGCAA+GGG | 0.631629 | 5.2:-77767246 | None:intergenic |
| CCCATAGGATGTGCATCATG+AGG | 0.645354 | 5.2:-77769380 | None:intergenic |
| AGACAGGGTGAAGGATGAGG+AGG | 0.646402 | 5.2:-77767313 | None:intergenic |
| TGTATATACTGCTATTGCCG+GGG | 0.653482 | 5.2:+77770236 | MS.gene030076:CDS |
| AAAACTGTGAAATACTCGGG+TGG | 0.654400 | 5.2:-77771100 | None:intergenic |
| AACAGATTCACAACCACCAG+CGG | 0.655832 | 5.2:+77767217 | MS.gene030076:CDS |
| GAAGGGATTCTTAGATACAG+AGG | 0.673586 | 5.2:+77768379 | MS.gene030076:CDS |
| ATACTCGGGTGGAAAACCCA+TGG | 0.675324 | 5.2:-77771089 | None:intergenic |
| ATTGAGCTAAGACAGGGTGA+AGG | 0.675884 | 5.2:-77767322 | None:intergenic |
| GCGGTGATTGAGCTAAGACA+GGG | 0.681312 | 5.2:-77767328 | None:intergenic |
| GAGCACTTATGGCATTCACA+AGG | 0.685545 | 5.2:-77769406 | None:intergenic |
| TCTAGTGCACGAGTTAGCTG+AGG | 0.687187 | 5.2:-77770058 | None:intergenic |
| CTATATGGACCTCTTCATGG+TGG | 0.692671 | 5.2:+77770270 | MS.gene030076:CDS |
| GCAAGGGAGAGTACCGCTGG+TGG | 0.701177 | 5.2:-77767230 | None:intergenic |
| GTGCCATTGAAGTTGGCCAG+CGG | 0.708821 | 5.2:-77767347 | None:intergenic |
| CTCTGTGTAAGATAGTTGGG+TGG | 0.716703 | 5.2:-77769881 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTCTTATAATTTATTGC+AGG | + | chr5.2:77769577-77769596 | MS.gene030076:intron | 15.0% |
| !!! | CAAATAAAACTATCATTTTT+GGG | - | chr5.2:77770618-77770637 | None:intergenic | 15.0% |
| !!! | GATTTTTTTATTGAATTGTT+TGG | + | chr5.2:77767518-77767537 | MS.gene030076:intron | 15.0% |
| !!! | TCAAATAAAACTATCATTTT+TGG | - | chr5.2:77770619-77770638 | None:intergenic | 15.0% |
| !!! | TCATCTTAATTTTATTTTGT+AGG | + | chr5.2:77769340-77769359 | MS.gene030076:intron | 15.0% |
| !!! | TTACTTTCTTTTTGTTTTTT+GGG | + | chr5.2:77770520-77770539 | MS.gene030076:intron | 15.0% |
| !!! | TTTTCTTATAATTTATTGCA+GGG | + | chr5.2:77769578-77769597 | MS.gene030076:intron | 15.0% |
| !! | AAATAAAACTGTGAAATACT+CGG | - | chr5.2:77771107-77771126 | None:intergenic | 20.0% |
| !! | ATGCAATTATTTGATTATTC+AGG | + | chr5.2:77770864-77770883 | MS.gene030076:intron | 20.0% |
| !! | CAGAGAAATTATTTAAAGAA+AGG | - | chr5.2:77771221-77771240 | None:intergenic | 20.0% |
| !! | CTTTCTTTAAATAATTTCTC+TGG | + | chr5.2:77771219-77771238 | MS.gene030076:intron | 20.0% |
| !! | TCAACAATTAGTTATATTGA+CGG | + | chr5.2:77768352-77768371 | MS.gene030076:CDS | 20.0% |
| !! | TGAATAATCAAATAATTGCA+TGG | - | chr5.2:77770865-77770884 | None:intergenic | 20.0% |
| !! | TTATTATATAAGTGGTTGTT+TGG | + | chr5.2:77767665-77767684 | MS.gene030076:intron | 20.0% |
| !!! | AAAAATCTATAAGCTTTGTA+AGG | - | chr5.2:77768593-77768612 | None:intergenic | 20.0% |
| !!! | AAAATCTATAAGCTTTGTAA+GGG | - | chr5.2:77768592-77768611 | None:intergenic | 20.0% |
| !!! | AGGTGTAATAATTTTTCTTA+TGG | + | chr5.2:77769111-77769130 | MS.gene030076:intron | 20.0% |
| !!! | ATAATGTTTCTTTTTTCCTT+AGG | + | chr5.2:77769960-77769979 | MS.gene030076:intron | 20.0% |
| !!! | ATTCTGTTTTAGGTTTATAT+CGG | + | chr5.2:77771300-77771319 | MS.gene030076:intron | 20.0% |
| !!! | ATTTTTATAGATGTATGCTT+AGG | + | chr5.2:77769280-77769299 | MS.gene030076:intron | 20.0% |
| !!! | GGTGTAATAATTTTTCTTAT+GGG | + | chr5.2:77769112-77769131 | MS.gene030076:intron | 20.0% |
| !!! | GTGTAATAATTTTTCTTATG+GGG | + | chr5.2:77769113-77769132 | MS.gene030076:intron | 20.0% |
| !!! | GTTACTTTCTTTTTGTTTTT+TGG | + | chr5.2:77770519-77770538 | MS.gene030076:intron | 20.0% |
| !!! | TTCAAATCGACTTAATAAAT+TGG | - | chr5.2:77771275-77771294 | None:intergenic | 20.0% |
| !!! | TTGATAGCAATATTTTTATG+AGG | + | chr5.2:77769091-77769110 | MS.gene030076:intron | 20.0% |
| !!! | TTGATTCTTTGTATGTTTTA+TGG | + | chr5.2:77769920-77769939 | MS.gene030076:intron | 20.0% |
| !!! | TTTTACAGCTTGTATATTTT+GGG | + | chr5.2:77769743-77769762 | MS.gene030076:intron | 20.0% |
| !!! | TTTTCATAAGTTATCCTAAA+TGG | - | chr5.2:77767734-77767753 | None:intergenic | 20.0% |
| ! | AAGAATAAAATAGGGATGTT+TGG | - | chr5.2:77768194-77768213 | None:intergenic | 25.0% |
| ! | AATAAAACTGTGAAATACTC+GGG | - | chr5.2:77771106-77771125 | None:intergenic | 25.0% |
| ! | AATAAGTTGTTTATCAGAAC+AGG | + | chr5.2:77767928-77767947 | MS.gene030076:intron | 25.0% |
| ! | ACTACTCAACATAAAGTAAT+CGG | + | chr5.2:77770172-77770191 | MS.gene030076:intron | 25.0% |
| ! | AGATCAAATTATAGTTCCTA+AGG | - | chr5.2:77769979-77769998 | None:intergenic | 25.0% |
| ! | ATAAGCGCTTATTATATAAG+TGG | + | chr5.2:77767657-77767676 | MS.gene030076:intron | 25.0% |
| ! | ATAAGTTGTTTATCAGAACA+GGG | + | chr5.2:77767929-77767948 | MS.gene030076:intron | 25.0% |
| ! | ATAATAACTACTATGACTCT+GGG | - | chr5.2:77768699-77768718 | None:intergenic | 25.0% |
| ! | TAACTAATTGTTGATCTAAC+AGG | - | chr5.2:77768346-77768365 | None:intergenic | 25.0% |
| ! | TATAATAACTACTATGACTC+TGG | - | chr5.2:77768700-77768719 | None:intergenic | 25.0% |
| ! | TCTACTCTGGATTAATTTAT+AGG | + | chr5.2:77770962-77770981 | MS.gene030076:CDS | 25.0% |
| ! | TCTTGATATTTACAACTCAA+AGG | + | chr5.2:77769601-77769620 | MS.gene030076:CDS | 25.0% |
| ! | TGTAATCTGCAGTAAAAAAT+AGG | - | chr5.2:77769806-77769825 | None:intergenic | 25.0% |
| ! | TTCAAAGATTAGTAACTTGA+TGG | - | chr5.2:77769488-77769507 | None:intergenic | 25.0% |
| ! | TTCATTATACTGAACCATAT+CGG | - | chr5.2:77770815-77770834 | None:intergenic | 25.0% |
| ! | TTGAAATTTCATATTGTCGT+AGG | + | chr5.2:77769054-77769073 | MS.gene030076:intron | 25.0% |
| ! | TTGCATAAATTTATTACCTC+AGG | - | chr5.2:77771063-77771082 | None:intergenic | 25.0% |
| ! | TTGTATATAAAAGAGACAGA+GGG | - | chr5.2:77769697-77769716 | None:intergenic | 25.0% |
| !! | GATCATAGTTTTTGTAAACT+CGG | - | chr5.2:77770695-77770714 | None:intergenic | 25.0% |
| !! | GTATGTTTTATGGTTCTTTT+AGG | + | chr5.2:77769930-77769949 | MS.gene030076:intron | 25.0% |
| !! | GTTTTACAGCTTGTATATTT+TGG | + | chr5.2:77769742-77769761 | MS.gene030076:intron | 25.0% |
| !! | TCACTTACTAATTTTCTAAC+TGG | + | chr5.2:77769252-77769271 | MS.gene030076:intron | 25.0% |
| !! | TTGAATGTACATTCTGTTTT+AGG | + | chr5.2:77771290-77771309 | MS.gene030076:intron | 25.0% |
| !!! | AAAGAAGAGCATTCAATAAT+AGG | - | chr5.2:77767557-77767576 | None:intergenic | 25.0% |
| !!! | TACTTTTTCTCGATTTGTTA+TGG | + | chr5.2:77770548-77770567 | MS.gene030076:intron | 25.0% |
| !!! | TCGAGAGAGTTTTTAAAAAA+CGG | + | chr5.2:77768626-77768645 | MS.gene030076:intron | 25.0% |
| !!! | TTTATATATTAGTGCCGATA+TGG | + | chr5.2:77770798-77770817 | MS.gene030076:intron | 25.0% |
| AAAATGAATACCTTGATGCA+AGG | - | chr5.2:77770144-77770163 | None:intergenic | 30.0% | |
| AAACAAATAGCTCGGATTAT+TGG | + | chr5.2:77769635-77769654 | MS.gene030076:CDS | 30.0% | |
| AACAGTTGTTTATCCAAACA+AGG | - | chr5.2:77767637-77767656 | None:intergenic | 30.0% | |
| AACATTCCAGAATTCATTGA+AGG | + | chr5.2:77770478-77770497 | MS.gene030076:CDS | 30.0% | |
| AAGCAAGTTTGAAAAGCTTA+TGG | + | chr5.2:77768030-77768049 | MS.gene030076:intron | 30.0% | |
| AATTAATTGTGTTGTACCTG+TGG | + | chr5.2:77768219-77768238 | MS.gene030076:intron | 30.0% | |
| ATACAAAAGAACCCTGTAAA+TGG | - | chr5.2:77769320-77769339 | None:intergenic | 30.0% | |
| ATCGGCACTAATATATAAAC+TGG | - | chr5.2:77770797-77770816 | None:intergenic | 30.0% | |
| CAGTAACTAGATGAAATCAT+AGG | - | chr5.2:77770991-77771010 | None:intergenic | 30.0% | |
| CTGATGAATATTTCATCAAG+AGG | + | chr5.2:77770917-77770936 | MS.gene030076:CDS | 30.0% | |
| CTGCATATCATGCAATTATA+TGG | + | chr5.2:77769514-77769533 | MS.gene030076:intron | 30.0% | |
| CTGTATAGTAATACAATCAG+TGG | - | chr5.2:77769033-77769052 | None:intergenic | 30.0% | |
| CTTGACAGAGTTTATGAATA+TGG | - | chr5.2:77768092-77768111 | None:intergenic | 30.0% | |
| CTTGTATATAAAAGAGACAG+AGG | - | chr5.2:77769698-77769717 | None:intergenic | 30.0% | |
| GAAGCAAAAATGCTATGATT+TGG | - | chr5.2:77768976-77768995 | None:intergenic | 30.0% | |
| TATACAAGCTGTAAAACAAG+TGG | - | chr5.2:77769739-77769758 | None:intergenic | 30.0% | |
| TTACAAAAACTATGATCCCA+GGG | + | chr5.2:77770698-77770717 | MS.gene030076:CDS | 30.0% | |
| TTCATTTGCAACCATTTACA+GGG | + | chr5.2:77769306-77769325 | MS.gene030076:intron | 30.0% | |
| TTTACAAAAACTATGATCCC+AGG | + | chr5.2:77770697-77770716 | MS.gene030076:CDS | 30.0% | |
| TTTATATCGGAGAATGGTTA+CGG | + | chr5.2:77771313-77771332 | MS.gene030076:CDS | 30.0% | |
| TTTCATTTGCAACCATTTAC+AGG | + | chr5.2:77769305-77769324 | MS.gene030076:intron | 30.0% | |
| ! | AATCATAGCATTTTTGCTTC+AGG | + | chr5.2:77768976-77768995 | MS.gene030076:intron | 30.0% |
| ! | AGGCATTGTATGATATTCTT+GGG | - | chr5.2:77771043-77771062 | None:intergenic | 30.0% |
| ! | GAAGCTTTTCTTTACTTACT+TGG | - | chr5.2:77769466-77769485 | None:intergenic | 30.0% |
| ! | GACATTTTAAATAAGCTGCT+TGG | - | chr5.2:77768763-77768782 | None:intergenic | 30.0% |
| ! | GCTCTTCTTTTTGTTCATTA+TGG | + | chr5.2:77767567-77767586 | MS.gene030076:intron | 30.0% |
| ! | TAACTGTTATCTTGTTTCAG+TGG | + | chr5.2:77770207-77770226 | MS.gene030076:intron | 30.0% |
| ! | TGATTTCACTTAGCATTTTG+AGG | - | chr5.2:77770447-77770466 | None:intergenic | 30.0% |
| ! | TTTAGGTTTATATCGGAGAA+TGG | + | chr5.2:77771307-77771326 | MS.gene030076:intron | 30.0% |
| ! | TTTTCTCTCTCTTTTTCTTC+TGG | + | chr5.2:77769169-77769188 | MS.gene030076:intron | 30.0% |
| !! | TAAGTTTTGTGAGACCATTT+AGG | + | chr5.2:77767717-77767736 | MS.gene030076:intron | 30.0% |
| !!! | TTCTCTTTTTTCCAAGTGTA+TGG | + | chr5.2:77768795-77768814 | MS.gene030076:intron | 30.0% |
| AAAAGAAAGTAACAGCTACC+TGG | - | chr5.2:77770512-77770531 | None:intergenic | 35.0% | |
| AAAATCTTATACACGCACAC+TGG | - | chr5.2:77768484-77768503 | None:intergenic | 35.0% | |
| AATAGCTCGGATTATTGGAA+AGG | + | chr5.2:77769640-77769659 | MS.gene030076:CDS | 35.0% | |
| AGAATATCATACAATGCCTG+AGG | + | chr5.2:77771044-77771063 | MS.gene030076:intron | 35.0% | |
| AGGATGTTACAATAAAGCAG+TGG | - | chr5.2:77769786-77769805 | None:intergenic | 35.0% | |
| AGTTATATTGACGGTGATGA+AGG | + | chr5.2:77768361-77768380 | MS.gene030076:CDS | 35.0% | |
| AGTTCTCTGTGTAAGATAGT+TGG | - | chr5.2:77769888-77769907 | None:intergenic | 35.0% | |
| ATATTGTCGTAGGAATGTAG+TGG | + | chr5.2:77769064-77769083 | MS.gene030076:intron | 35.0% | |
| ATCGACTGGTAAAAATGACA+AGG | + | chr5.2:77768282-77768301 | MS.gene030076:CDS | 35.0% | |
| ATGTATATACTGCTATTGCC+GGG | + | chr5.2:77770235-77770254 | MS.gene030076:CDS | 35.0% | |
| ATTATACGCCAATCAAGCAA+AGG | + | chr5.2:77771337-77771356 | MS.gene030076:CDS | 35.0% | |
| ATTGCGTTCATGTAAGCTAT+AGG | + | chr5.2:77767997-77768016 | MS.gene030076:intron | 35.0% | |
| CCATATCAAATGCCTCAAAA+CGG | + | chr5.2:77771397-77771416 | MS.gene030076:CDS | 35.0% | |
| GATATGACCTTTGATTCTGT+AGG | + | chr5.2:77770417-77770436 | MS.gene030076:intron | 35.0% | |
| GATGTATATACTGCTATTGC+CGG | + | chr5.2:77770234-77770253 | MS.gene030076:CDS | 35.0% | |
| GGCATTGTATGATATTCTTG+GGG | - | chr5.2:77771042-77771061 | None:intergenic | 35.0% | |
| GGTCTCATAATCTTTGTATC+AGG | - | chr5.2:77771184-77771203 | None:intergenic | 35.0% | |
| GGTCTTAAAAAAACTGACAG+AGG | + | chr5.2:77770725-77770744 | MS.gene030076:CDS | 35.0% | |
| GTTATATTGACGGTGATGAA+GGG | + | chr5.2:77768362-77768381 | MS.gene030076:CDS | 35.0% | |
| GTTCTCTGTGTAAGATAGTT+GGG | - | chr5.2:77769887-77769906 | None:intergenic | 35.0% | |
| TCGACTGGTAAAAATGACAA+GGG | + | chr5.2:77768283-77768302 | MS.gene030076:CDS | 35.0% | |
| TCTCTCATCAACAATGGTTA+AGG | - | chr5.2:77767372-77767391 | None:intergenic | 35.0% | |
| TGAGAGACAAACAAATAGCT+CGG | + | chr5.2:77769627-77769646 | MS.gene030076:CDS | 35.0% | |
| TGCTGCAGTTTATCTTAGAA+TGG | + | chr5.2:77769834-77769853 | MS.gene030076:CDS | 35.0% | |
| TGGATAAACACCTCAATAAG+AGG | - | chr5.2:77770777-77770796 | None:intergenic | 35.0% | |
| TTCATCTAGTTACTGTGTCT+AGG | + | chr5.2:77770996-77771015 | MS.gene030076:intron | 35.0% | |
| TTGAACTTGGTATTTCTTGC+CGG | - | chr5.2:77767396-77767415 | None:intergenic | 35.0% | |
| TTGACACCTTCAATGAATTC+TGG | - | chr5.2:77770487-77770506 | None:intergenic | 35.0% | |
| TTTATCTTAGAATGGCAGGA+AGG | + | chr5.2:77769842-77769861 | MS.gene030076:CDS | 35.0% | |
| ! | AATGCTATGATTTGGCAGAT+AGG | - | chr5.2:77768968-77768987 | None:intergenic | 35.0% |
| ! | ATTGGAAAGGTGTGATTACT+CGG | + | chr5.2:77769653-77769672 | MS.gene030076:intron | 35.0% |
| ! | CAGGCATTGTATGATATTCT+TGG | - | chr5.2:77771044-77771063 | None:intergenic | 35.0% |
| ! | CTTCTGGTTGAAGCAAAATT+TGG | + | chr5.2:77769185-77769204 | MS.gene030076:intron | 35.0% |
| ! | CTTGTTGATTATGCCTTGTT+TGG | + | chr5.2:77767621-77767640 | MS.gene030076:intron | 35.0% |
| !! | AAAGACAGAAAGAGCACTTA+TGG | - | chr5.2:77769420-77769439 | None:intergenic | 35.0% |
| !! | TTTATTTGCTATCCCTCGAA+TGG | + | chr5.2:77771120-77771139 | MS.gene030076:CDS | 35.0% |
| !!! | TTTTTTAAGACCTTTGCCCT+GGG | - | chr5.2:77770717-77770736 | None:intergenic | 35.0% |
| !!! | TTTTTTTAAGACCTTTGCCC+TGG | - | chr5.2:77770718-77770737 | None:intergenic | 35.0% |
| AAAACTGTGAAATACTCGGG+TGG | - | chr5.2:77771103-77771122 | None:intergenic | 40.0% | |
| AAAAGAGACAGAGGGATGAA+AGG | - | chr5.2:77769689-77769708 | None:intergenic | 40.0% | |
| AAACTCACCAAAACTCCTTG+TGG | - | chr5.2:77768885-77768904 | None:intergenic | 40.0% | |
| AACTACCTTCTTGAGATCAG+TGG | - | chr5.2:77767444-77767463 | None:intergenic | 40.0% | |
| AAGTTAGAGAACACCACACA+AGG | - | chr5.2:77768245-77768264 | None:intergenic | 40.0% | |
| AATACCTTGATGCAAGGTGT+CGG | - | chr5.2:77770138-77770157 | None:intergenic | 40.0% | |
| AATTTATGCAATCAGCGCCA+TGG | + | chr5.2:77771072-77771091 | MS.gene030076:intron | 40.0% | |
| ACTGTATGTGCTTGTGCTAT+AGG | + | chr5.2:77767900-77767919 | MS.gene030076:intron | 40.0% | |
| ATTTATGCAATCAGCGCCAT+GGG | + | chr5.2:77771073-77771092 | MS.gene030076:intron | 40.0% | |
| CATCTGGAGAAACTTGAACT+TGG | - | chr5.2:77767409-77767428 | None:intergenic | 40.0% | |
| CCAGAGTAGAAGTCAACATT+TGG | - | chr5.2:77770952-77770971 | None:intergenic | 40.0% | |
| CGTTTCCTGGAGAAAAATAC+AGG | - | chr5.2:77770651-77770670 | None:intergenic | 40.0% | |
| CTTTGTATCAGGATCATCCA+AGG | - | chr5.2:77771173-77771192 | None:intergenic | 40.0% | |
| GAAGGGATTCTTAGATACAG+AGG | + | chr5.2:77768379-77768398 | MS.gene030076:CDS | 40.0% | |
| GAGACTATCCTTTGCTTGAT+TGG | - | chr5.2:77771348-77771367 | None:intergenic | 40.0% | |
| GAGGATTGGGTTTATATGAC+CGG | - | chr5.2:77770042-77770061 | None:intergenic | 40.0% | |
| GCAGTTTATCTTAGAATGGC+AGG | + | chr5.2:77769838-77769857 | MS.gene030076:CDS | 40.0% | |
| GGACTCAAGTTATATGATCC+TGG | + | chr5.2:77768304-77768323 | MS.gene030076:CDS | 40.0% | |
| TCTTTACTTACTTGGAGAGC+AGG | - | chr5.2:77769458-77769477 | None:intergenic | 40.0% | |
| TGGGTAAACTTCCATACACT+TGG | - | chr5.2:77768809-77768828 | None:intergenic | 40.0% | |
| TGTATATACTGCTATTGCCG+GGG | + | chr5.2:77770236-77770255 | MS.gene030076:CDS | 40.0% | |
| TTTATTGTGCGTGCTTTCAG+AGG | + | chr5.2:77770013-77770032 | MS.gene030076:intron | 40.0% | |
| ! | AAGTGTTTTCCATTGTTGGC+CGG | + | chr5.2:77770748-77770767 | MS.gene030076:CDS | 40.0% |
| ! | ACCATTGTTGATGAGAGAAC+CGG | + | chr5.2:77767374-77767393 | MS.gene030076:CDS | 40.0% |
| ! | CAAGTTCAAGTTTCTCCAGA+TGG | + | chr5.2:77767407-77767426 | MS.gene030076:CDS | 40.0% |
| ! | CCATTCAGCTAACTGACTTT+CGG | - | chr5.2:77768832-77768851 | None:intergenic | 40.0% |
| ! | CTTGTCCTGTATTTTTCTCC+AGG | + | chr5.2:77770643-77770662 | MS.gene030076:intron | 40.0% |
| ! | GTTATCTTGTTTCAGTGGTG+TGG | + | chr5.2:77770212-77770231 | MS.gene030076:intron | 40.0% |
| ! | TTGCTCTTGTTGCCTCTTTT+GGG | + | chr5.2:77770584-77770603 | MS.gene030076:intron | 40.0% |
| !! | AAACGAAAGCTCTCTGGTTT+TGG | + | chr5.2:77770666-77770685 | MS.gene030076:CDS | 40.0% |
| !! | CCAAATGTTGACTTCTACTC+TGG | + | chr5.2:77770949-77770968 | MS.gene030076:CDS | 40.0% |
| !! | TATTCAGGTTGCAGTTGCTT+TGG | + | chr5.2:77770879-77770898 | MS.gene030076:intron | 40.0% |
| !! | TCATTGAAGGTGTCAAAACC+AGG | + | chr5.2:77770491-77770510 | MS.gene030076:CDS | 40.0% |
| !!! | CCGTTTTGAGGCATTTGATA+TGG | - | chr5.2:77771400-77771419 | None:intergenic | 40.0% |
| !!! | GAGGAAGTGTTTTCCATTGT+TGG | + | chr5.2:77770744-77770763 | MS.gene030076:CDS | 40.0% |
| !!! | GGCAGAGAAAAGCACTTTTA+TGG | + | chr5.2:77768420-77768439 | MS.gene030076:CDS | 40.0% |
| AAACTATGATCCCAGGGCAA+AGG | + | chr5.2:77770704-77770723 | MS.gene030076:CDS | 45.0% | |
| AACAGATTCACAACCACCAG+CGG | + | chr5.2:77767217-77767236 | MS.gene030076:CDS | 45.0% | |
| ACAAAACCGATGAGACTGTG+AGG | - | chr5.2:77768934-77768953 | None:intergenic | 45.0% | |
| ACACCTCAATAAGAGGATCC+CGG | - | chr5.2:77770770-77770789 | None:intergenic | 45.0% | |
| AGGACAGCCTACAGAATCAA+AGG | - | chr5.2:77770427-77770446 | None:intergenic | 45.0% | |
| AGTAACCCTCACAGTCTCAT+CGG | + | chr5.2:77768925-77768944 | MS.gene030076:intron | 45.0% | |
| ATACAGAGGCTACCCAATTG+AGG | + | chr5.2:77768393-77768412 | MS.gene030076:CDS | 45.0% | |
| ATTGAGCTAAGACAGGGTGA+AGG | - | chr5.2:77767325-77767344 | None:intergenic | 45.0% | |
| CAAAACCGATGAGACTGTGA+GGG | - | chr5.2:77768933-77768952 | None:intergenic | 45.0% | |
| CAAAGCCACTGATCTCAAGA+AGG | + | chr5.2:77767436-77767455 | MS.gene030076:CDS | 45.0% | |
| CCGAAAGTCAGTTAGCTGAA+TGG | + | chr5.2:77768829-77768848 | MS.gene030076:CDS | 45.0% | |
| CCTCATGATGCACATCCTAT+GGG | + | chr5.2:77769380-77769399 | MS.gene030076:CDS | 45.0% | |
| CTATATGGACCTCTTCATGG+TGG | + | chr5.2:77770270-77770289 | MS.gene030076:CDS | 45.0% | |
| CTCTGTGTAAGATAGTTGGG+TGG | - | chr5.2:77769884-77769903 | None:intergenic | 45.0% | |
| GAGCACTTATGGCATTCACA+AGG | - | chr5.2:77769409-77769428 | None:intergenic | 45.0% | |
| GCTCTATATGGACCTCTTCA+TGG | + | chr5.2:77770267-77770286 | MS.gene030076:CDS | 45.0% | |
| GGAGCTGTGTTTAAATAGCC+AGG | - | chr5.2:77768325-77768344 | None:intergenic | 45.0% | |
| GTCTATCTGCAGATATCGAC+TGG | + | chr5.2:77768268-77768287 | MS.gene030076:intron | 45.0% | |
| GTGTAAGATAGTTGGGTGGA+TGG | - | chr5.2:77769880-77769899 | None:intergenic | 45.0% | |
| TCAAGTGATGCTGACAAGCT+TGG | + | chr5.2:77771366-77771385 | MS.gene030076:CDS | 45.0% | |
| TCATTAGCTCCACCATGAAG+AGG | - | chr5.2:77770282-77770301 | None:intergenic | 45.0% | |
| TCATTTCATGTTCTGCGTGC+AGG | - | chr5.2:77770096-77770115 | None:intergenic | 45.0% | |
| TCTCTGCCAACTCCTCAATT+GGG | - | chr5.2:77768408-77768427 | None:intergenic | 45.0% | |
| TTCTCTGCCAACTCCTCAAT+TGG | - | chr5.2:77768409-77768428 | None:intergenic | 45.0% | |
| TTGGAGAGCAGGATTTGCAT+CGG | - | chr5.2:77769447-77769466 | None:intergenic | 45.0% | |
| ! | AGCTGTTCCACAAGGAGTTT+TGG | + | chr5.2:77768875-77768894 | MS.gene030076:CDS | 45.0% |
| ! | AGTGTTTTCCATTGTTGGCC+GGG | + | chr5.2:77770749-77770768 | MS.gene030076:CDS | 45.0% |
| ! | GTTGCTCTTGTTGCCTCTTT+TGG | + | chr5.2:77770583-77770602 | MS.gene030076:intron | 45.0% |
| ! | TCAGCTAACTGACTTTCGGT+GGG | - | chr5.2:77768828-77768847 | None:intergenic | 45.0% |
| ! | TCTTCATGGTGGAGCTAATG+AGG | + | chr5.2:77770281-77770300 | MS.gene030076:CDS | 45.0% |
| ! | TGCTCTTGTTGCCTCTTTTG+GGG | + | chr5.2:77770585-77770604 | MS.gene030076:intron | 45.0% |
| ! | TTCAGCTAACTGACTTTCGG+TGG | - | chr5.2:77768829-77768848 | None:intergenic | 45.0% |
| !! | GGTTAAGGTGCCATTGAAGT+TGG | - | chr5.2:77767357-77767376 | None:intergenic | 45.0% |
| !!! | AGTCTCATCGGTTTTGTGGT+TGG | + | chr5.2:77768937-77768956 | MS.gene030076:intron | 45.0% |
| !!! | TCACAGTCTCATCGGTTTTG+TGG | + | chr5.2:77768933-77768952 | MS.gene030076:intron | 45.0% |
| !! | AATTATTAAAAGAATAAAAT+AGG | - | chr5.2:77768203-77768222 | None:intergenic | 5.0% |
| !! | ATTATTAAAAGAATAAAATA+GGG | - | chr5.2:77768202-77768221 | None:intergenic | 5.0% |
| ACAAGTACCCAGCCATTCGA+GGG | - | chr5.2:77771135-77771154 | None:intergenic | 50.0% | |
| ACCAGAGAGCTTTCGTTTCC+TGG | - | chr5.2:77770664-77770683 | None:intergenic | 50.0% | |
| AGCGGTGATTGAGCTAAGAC+AGG | - | chr5.2:77767332-77767351 | None:intergenic | 50.0% | |
| AGGCTACCCAATTGAGGAGT+TGG | + | chr5.2:77768399-77768418 | MS.gene030076:CDS | 50.0% | |
| ATACTCGGGTGGAAAACCCA+TGG | - | chr5.2:77771092-77771111 | None:intergenic | 50.0% | |
| ATATAGAGCTCCAACAGCCC+CGG | - | chr5.2:77770256-77770275 | None:intergenic | 50.0% | |
| CAGCATTCAGCTGTTCCACA+AGG | + | chr5.2:77768867-77768886 | MS.gene030076:CDS | 50.0% | |
| CCCATAGGATGTGCATCATG+AGG | - | chr5.2:77769383-77769402 | None:intergenic | 50.0% | |
| CTAAGACAGGGTGAAGGATG+AGG | - | chr5.2:77767319-77767338 | None:intergenic | 50.0% | |
| GCACGAGTTAGCTGAGGATT+GGG | - | chr5.2:77770055-77770074 | None:intergenic | 50.0% | |
| GCATTCACAAGGACACCCAT+AGG | - | chr5.2:77769398-77769417 | None:intergenic | 50.0% | |
| GCCTCATGATGCACATCCTA+TGG | + | chr5.2:77769379-77769398 | MS.gene030076:CDS | 50.0% | |
| GCGGTGATTGAGCTAAGACA+GGG | - | chr5.2:77767331-77767350 | None:intergenic | 50.0% | |
| GTCACATTGGAGAGAGTCCT+TGG | + | chr5.2:77771153-77771172 | MS.gene030076:CDS | 50.0% | |
| GTGAAGGATGAGGAGGTGAT+CGG | - | chr5.2:77767309-77767328 | None:intergenic | 50.0% | |
| TCCAGGAAACGAAAGCTCTC+TGG | + | chr5.2:77770660-77770679 | MS.gene030076:intron | 50.0% | |
| TCTAGTGCACGAGTTAGCTG+AGG | - | chr5.2:77770061-77770080 | None:intergenic | 50.0% | |
| TGCACGAGTTAGCTGAGGAT+TGG | - | chr5.2:77770056-77770075 | None:intergenic | 50.0% | |
| TGGAGAGCAGGATTTGCATC+GGG | - | chr5.2:77769446-77769465 | None:intergenic | 50.0% | |
| TGGCTGGGTACTTGTCACAT+TGG | + | chr5.2:77771140-77771159 | MS.gene030076:CDS | 50.0% | |
| TGGGAAGAAACCCCCAAAAG+AGG | - | chr5.2:77770599-77770618 | None:intergenic | 50.0% | |
| TGTCTTAGCTCAATCACCGC+TGG | + | chr5.2:77767331-77767350 | MS.gene030076:CDS | 50.0% | |
| TTGCTATCCCTCGAATGGCT+GGG | + | chr5.2:77771125-77771144 | MS.gene030076:CDS | 50.0% | |
| ! | GCCGGTTCTCTCATCAACAA+TGG | - | chr5.2:77767378-77767397 | None:intergenic | 50.0% |
| ! | GCTCTTGTTGCCTCTTTTGG+GGG | + | chr5.2:77770586-77770605 | MS.gene030076:intron | 50.0% |
| ! | TTTGCTATCCCTCGAATGGC+TGG | + | chr5.2:77771124-77771143 | MS.gene030076:CDS | 50.0% |
| !! | GGTTGCAGTTGCTTTGGAGA+AGG | + | chr5.2:77770885-77770904 | MS.gene030076:intron | 50.0% |
| AAGAGGATCCCGGCCAACAA+TGG | - | chr5.2:77770760-77770779 | None:intergenic | 55.0% | |
| AAGGATGAGGAGGTGATCGG+TGG | - | chr5.2:77767306-77767325 | None:intergenic | 55.0% | |
| AGAACACCACACAAGGCCAC+AGG | - | chr5.2:77768238-77768257 | None:intergenic | 55.0% | |
| AGACAGGGTGAAGGATGAGG+AGG | - | chr5.2:77767316-77767335 | None:intergenic | 55.0% | |
| AGAGGGTGGCTAAACGAGCA+AGG | - | chr5.2:77767250-77767269 | None:intergenic | 55.0% | |
| CTGTCCGACACCTTGCATCA+AGG | + | chr5.2:77770131-77770150 | MS.gene030076:CDS | 55.0% | |
| GACAAGTACCCAGCCATTCG+AGG | - | chr5.2:77771136-77771155 | None:intergenic | 55.0% | |
| GAGGGTGGCTAAACGAGCAA+GGG | - | chr5.2:77767249-77767268 | None:intergenic | 55.0% | |
| GGGGCTGTTGGAGCTCTATA+TGG | + | chr5.2:77770255-77770274 | MS.gene030076:CDS | 55.0% | |
| TCACCGCTGGCCAACTTCAA+TGG | + | chr5.2:77767344-77767363 | MS.gene030076:CDS | 55.0% | |
| TGCGTGCTTTCAGAGGCAAC+CGG | + | chr5.2:77770020-77770039 | MS.gene030076:intron | 55.0% | |
| TGGCCGGGATCCTCTTATTG+AGG | + | chr5.2:77770764-77770783 | MS.gene030076:CDS | 55.0% | |
| ! | AGTTGGGTGGATGGAAGCAC+AGG | - | chr5.2:77769871-77769890 | None:intergenic | 55.0% |
| ! | GTGCCATTGAAGTTGGCCAG+CGG | - | chr5.2:77767350-77767369 | None:intergenic | 55.0% |
| !! | AACGGCGACTTGCTGGATCT+AGG | + | chr5.2:77771415-77771434 | MS.gene030076:CDS | 55.0% |
| !! | ATCGGTGGATTGCTCGTTGC+CGG | - | chr5.2:77767291-77767310 | None:intergenic | 55.0% |
| !! | GTGGCTTTGACAGTGCCATC+TGG | - | chr5.2:77767425-77767444 | None:intergenic | 55.0% |
| !! | GTTGTACCTGTGGCCTTGTG+TGG | + | chr5.2:77768229-77768248 | MS.gene030076:intron | 55.0% |
| !! | TCCAGCAAGTCGCCGTTTTG+AGG | - | chr5.2:77771412-77771431 | None:intergenic | 55.0% |
| ACTGCTATTGCCGGGGCTGT+TGG | + | chr5.2:77770243-77770262 | MS.gene030076:CDS | 60.0% | |
| AGGGGAGAAGGTGAGCTGAG+AGG | - | chr5.2:77767268-77767287 | None:intergenic | 60.0% | |
| GAGAAGGTGAGCTGAGAGGG+TGG | - | chr5.2:77767264-77767283 | None:intergenic | 60.0% | |
| GCCTCAAAACGGCGACTTGC+TGG | + | chr5.2:77771408-77771427 | MS.gene030076:CDS | 60.0% | |
| GGGGAGAAGGTGAGCTGAGA+GGG | - | chr5.2:77767267-77767286 | None:intergenic | 60.0% | |
| TCAGCTCACCTTCTCCCCTC+CGG | + | chr5.2:77767269-77767288 | MS.gene030076:CDS | 60.0% | |
| TGGATTGCTCGTTGCCGGAG+GGG | - | chr5.2:77767286-77767305 | None:intergenic | 60.0% | |
| ! | GTGGATTGCTCGTTGCCGGA+GGG | - | chr5.2:77767287-77767306 | None:intergenic | 60.0% |
| ! | TGGGTGGATGGAAGCACAGG+AGG | - | chr5.2:77769868-77769887 | None:intergenic | 60.0% |
| !! | CGAGCAAGGGAGAGTACCGC+TGG | - | chr5.2:77767236-77767255 | None:intergenic | 65.0% |
| !! | GCAAGGGAGAGTACCGCTGG+TGG | - | chr5.2:77767233-77767252 | None:intergenic | 65.0% |
| !! | GGTGGATTGCTCGTTGCCGG+AGG | - | chr5.2:77767288-77767307 | None:intergenic | 65.0% |
| GCTCGTTGCCGGAGGGGAGA+AGG | - | chr5.2:77767280-77767299 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 77767212 | 77771443 | 77767212 | ID=MS.gene030076 |
| chr5.2 | mRNA | 77767212 | 77771443 | 77767212 | ID=MS.gene030076.t1;Parent=MS.gene030076 |
| chr5.2 | exon | 77767212 | 77767457 | 77767212 | ID=MS.gene030076.t1.exon1;Parent=MS.gene030076.t1 |
| chr5.2 | CDS | 77767212 | 77767457 | 77767212 | ID=cds.MS.gene030076.t1;Parent=MS.gene030076.t1 |
| chr5.2 | exon | 77768280 | 77768460 | 77768280 | ID=MS.gene030076.t1.exon2;Parent=MS.gene030076.t1 |
| chr5.2 | CDS | 77768280 | 77768460 | 77768280 | ID=cds.MS.gene030076.t1;Parent=MS.gene030076.t1 |
| chr5.2 | exon | 77768811 | 77768896 | 77768811 | ID=MS.gene030076.t1.exon3;Parent=MS.gene030076.t1 |
| chr5.2 | CDS | 77768811 | 77768896 | 77768811 | ID=cds.MS.gene030076.t1;Parent=MS.gene030076.t1 |
| chr5.2 | exon | 77769362 | 77769466 | 77769362 | ID=MS.gene030076.t1.exon4;Parent=MS.gene030076.t1 |
| chr5.2 | CDS | 77769362 | 77769466 | 77769362 | ID=cds.MS.gene030076.t1;Parent=MS.gene030076.t1 |
| chr5.2 | exon | 77769599 | 77769661 | 77769599 | ID=MS.gene030076.t1.exon5;Parent=MS.gene030076.t1 |
| chr5.2 | CDS | 77769599 | 77769661 | 77769599 | ID=cds.MS.gene030076.t1;Parent=MS.gene030076.t1 |
| chr5.2 | exon | 77769820 | 77769929 | 77769820 | ID=MS.gene030076.t1.exon6;Parent=MS.gene030076.t1 |
| chr5.2 | CDS | 77769820 | 77769929 | 77769820 | ID=cds.MS.gene030076.t1;Parent=MS.gene030076.t1 |
| chr5.2 | exon | 77770033 | 77770152 | 77770033 | ID=MS.gene030076.t1.exon7;Parent=MS.gene030076.t1 |
| chr5.2 | CDS | 77770033 | 77770152 | 77770033 | ID=cds.MS.gene030076.t1;Parent=MS.gene030076.t1 |
| chr5.2 | exon | 77770227 | 77770302 | 77770227 | ID=MS.gene030076.t1.exon8;Parent=MS.gene030076.t1 |
| chr5.2 | CDS | 77770227 | 77770302 | 77770227 | ID=cds.MS.gene030076.t1;Parent=MS.gene030076.t1 |
| chr5.2 | exon | 77770439 | 77770512 | 77770439 | ID=MS.gene030076.t1.exon9;Parent=MS.gene030076.t1 |
| chr5.2 | CDS | 77770439 | 77770512 | 77770439 | ID=cds.MS.gene030076.t1;Parent=MS.gene030076.t1 |
| chr5.2 | exon | 77770665 | 77770785 | 77770665 | ID=MS.gene030076.t1.exon10;Parent=MS.gene030076.t1 |
| chr5.2 | CDS | 77770665 | 77770785 | 77770665 | ID=cds.MS.gene030076.t1;Parent=MS.gene030076.t1 |
| chr5.2 | exon | 77770886 | 77770983 | 77770886 | ID=MS.gene030076.t1.exon11;Parent=MS.gene030076.t1 |
| chr5.2 | CDS | 77770886 | 77770983 | 77770886 | ID=cds.MS.gene030076.t1;Parent=MS.gene030076.t1 |
| chr5.2 | exon | 77771087 | 77771210 | 77771087 | ID=MS.gene030076.t1.exon12;Parent=MS.gene030076.t1 |
| chr5.2 | CDS | 77771087 | 77771210 | 77771087 | ID=cds.MS.gene030076.t1;Parent=MS.gene030076.t1 |
| chr5.2 | exon | 77771312 | 77771443 | 77771312 | ID=MS.gene030076.t1.exon13;Parent=MS.gene030076.t1 |
| chr5.2 | CDS | 77771312 | 77771443 | 77771312 | ID=cds.MS.gene030076.t1;Parent=MS.gene030076.t1 |
| Gene Sequence |
| Protein sequence |
