Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030079.t1 | XP_024638953.1 | 96 | 323 | 13 | 0 | 1 | 323 | 1 | 323 | 1.10E-177 | 632.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030079.t1 | Q4V3D9 | 56.8 | 345 | 106 | 2 | 22 | 323 | 30 | 374 | 2.4e-109 | 396.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030079.t1 | G7K3F5 | 96.0 | 323 | 13 | 0 | 1 | 323 | 1 | 323 | 7.8e-178 | 632.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene030079 | MS.gene35719 | PPI |
| MS.gene030079 | MS.gene061292 | PPI |
| MS.gene030079 | MS.gene059296 | PPI |
| MS.gene030079 | MS.gene61630 | PPI |
| MS.gene030079 | MS.gene66625 | PPI |
| MS.gene030079 | MS.gene034366 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030079.t1 | MTR_5g091980 | 95.975 | 323 | 13 | 0 | 1 | 323 | 1 | 323 | 0.0 | 635 |
| MS.gene030079.t1 | MTR_7g490350 | 69.505 | 364 | 64 | 3 | 7 | 323 | 6 | 369 | 1.79e-179 | 501 |
| MS.gene030079.t1 | MTR_7g490330 | 73.926 | 326 | 81 | 2 | 1 | 323 | 1 | 325 | 8.26e-176 | 489 |
| MS.gene030079.t1 | MTR_7g090300 | 68.407 | 364 | 68 | 3 | 7 | 323 | 6 | 369 | 1.19e-175 | 491 |
| MS.gene030079.t1 | MTR_2g087780 | 48.295 | 352 | 128 | 7 | 23 | 323 | 47 | 395 | 2.75e-103 | 308 |
| MS.gene030079.t1 | MTR_4g050190 | 46.439 | 351 | 135 | 7 | 23 | 323 | 44 | 391 | 6.66e-97 | 292 |
| MS.gene030079.t1 | MTR_7g090320 | 42.169 | 332 | 138 | 5 | 45 | 322 | 55 | 386 | 2.69e-85 | 262 |
| MS.gene030079.t1 | MTR_7g090310 | 40.922 | 347 | 151 | 6 | 30 | 322 | 39 | 385 | 2.73e-85 | 262 |
| MS.gene030079.t1 | MTR_2g099030 | 45.253 | 316 | 122 | 5 | 48 | 313 | 82 | 396 | 1.62e-84 | 261 |
| MS.gene030079.t1 | MTR_4g112670 | 39.067 | 343 | 177 | 4 | 1 | 321 | 2 | 334 | 1.11e-77 | 241 |
| MS.gene030079.t1 | MTR_2g058450 | 44.300 | 307 | 150 | 4 | 38 | 323 | 30 | 336 | 6.82e-73 | 228 |
| MS.gene030079.t1 | MTR_4g112630 | 41.522 | 289 | 156 | 5 | 47 | 322 | 37 | 325 | 5.13e-72 | 226 |
| MS.gene030079.t1 | MTR_4g112650 | 39.932 | 293 | 154 | 4 | 47 | 317 | 37 | 329 | 8.50e-68 | 215 |
| MS.gene030079.t1 | MTR_4g112620 | 37.024 | 289 | 138 | 4 | 48 | 322 | 42 | 300 | 6.36e-55 | 181 |
| MS.gene030079.t1 | MTR_2g058410 | 39.565 | 230 | 121 | 3 | 109 | 320 | 1 | 230 | 5.54e-43 | 148 |
| MS.gene030079.t1 | MTR_0003s0530 | 37.705 | 183 | 93 | 3 | 153 | 315 | 2 | 183 | 1.61e-34 | 125 |
| MS.gene030079.t1 | MTR_8g074270 | 35.808 | 229 | 126 | 5 | 48 | 276 | 78 | 285 | 4.13e-33 | 125 |
| MS.gene030079.t1 | MTR_8g074170 | 35.217 | 230 | 126 | 6 | 48 | 276 | 78 | 285 | 4.08e-32 | 123 |
| MS.gene030079.t1 | MTR_8g074210 | 33.766 | 231 | 132 | 4 | 46 | 276 | 76 | 285 | 3.65e-30 | 118 |
| MS.gene030079.t1 | MTR_4g112840 | 46.000 | 100 | 54 | 0 | 183 | 282 | 60 | 159 | 1.58e-24 | 98.2 |
| MS.gene030079.t1 | MTR_2g042370 | 28.710 | 310 | 167 | 9 | 58 | 323 | 58 | 357 | 4.76e-22 | 95.5 |
| MS.gene030079.t1 | MTR_2g042430 | 29.412 | 306 | 161 | 10 | 58 | 319 | 70 | 364 | 3.17e-21 | 93.2 |
| MS.gene030079.t1 | MTR_2g042420 | 28.179 | 291 | 158 | 8 | 73 | 323 | 70 | 349 | 5.25e-21 | 92.4 |
| MS.gene030079.t1 | MTR_1g075865 | 38.679 | 106 | 64 | 1 | 157 | 262 | 7 | 111 | 5.75e-19 | 82.0 |
| MS.gene030079.t1 | MTR_8g074320 | 36.434 | 129 | 77 | 3 | 106 | 231 | 95 | 221 | 1.17e-15 | 75.1 |
| MS.gene030079.t1 | MTR_2g058430 | 40.206 | 97 | 56 | 1 | 100 | 194 | 52 | 148 | 3.50e-15 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030079.t1 | AT3G57030 | 56.812 | 345 | 106 | 2 | 22 | 323 | 30 | 374 | 7.83e-138 | 395 |
| MS.gene030079.t1 | AT5G22020 | 47.801 | 341 | 127 | 5 | 31 | 323 | 58 | 395 | 8.01e-99 | 297 |
| MS.gene030079.t1 | AT5G22020 | 47.801 | 341 | 127 | 5 | 31 | 323 | 58 | 395 | 8.01e-99 | 297 |
| MS.gene030079.t1 | AT5G22020 | 47.801 | 341 | 127 | 5 | 31 | 323 | 58 | 395 | 8.01e-99 | 297 |
| MS.gene030079.t1 | AT1G08470 | 46.000 | 350 | 135 | 7 | 24 | 323 | 44 | 389 | 9.18e-98 | 294 |
| MS.gene030079.t1 | AT3G57010 | 44.475 | 362 | 148 | 8 | 7 | 320 | 11 | 367 | 2.08e-89 | 272 |
| MS.gene030079.t1 | AT2G41290 | 44.715 | 369 | 148 | 9 | 10 | 323 | 9 | 376 | 3.61e-89 | 271 |
| MS.gene030079.t1 | AT2G41300 | 46.452 | 310 | 120 | 4 | 54 | 320 | 84 | 390 | 2.71e-88 | 270 |
| MS.gene030079.t1 | AT3G57020 | 43.503 | 354 | 150 | 7 | 13 | 320 | 17 | 366 | 3.36e-87 | 266 |
| MS.gene030079.t1 | AT3G57020 | 41.808 | 354 | 142 | 7 | 13 | 320 | 17 | 352 | 5.15e-80 | 248 |
| MS.gene030079.t1 | AT3G59530 | 50.206 | 243 | 112 | 3 | 39 | 273 | 75 | 316 | 1.11e-77 | 243 |
| MS.gene030079.t1 | AT3G59530 | 50.206 | 243 | 112 | 3 | 39 | 273 | 75 | 316 | 1.11e-77 | 243 |
| MS.gene030079.t1 | AT3G59530 | 50.206 | 243 | 112 | 3 | 39 | 273 | 75 | 316 | 1.11e-77 | 243 |
| MS.gene030079.t1 | AT1G74020 | 41.980 | 293 | 150 | 6 | 48 | 323 | 38 | 327 | 5.74e-67 | 213 |
| MS.gene030079.t1 | AT1G74010 | 40.273 | 293 | 154 | 7 | 48 | 323 | 37 | 325 | 2.35e-62 | 201 |
| MS.gene030079.t1 | AT1G74000 | 39.456 | 294 | 158 | 7 | 47 | 323 | 39 | 329 | 1.97e-61 | 199 |
| MS.gene030079.t1 | AT3G51430 | 31.783 | 258 | 156 | 6 | 24 | 280 | 45 | 283 | 5.08e-30 | 117 |
| MS.gene030079.t1 | AT3G51440 | 32.422 | 256 | 150 | 7 | 49 | 300 | 70 | 306 | 5.68e-30 | 117 |
| MS.gene030079.t1 | AT3G51430 | 30.435 | 276 | 171 | 7 | 24 | 297 | 45 | 301 | 7.18e-30 | 117 |
| MS.gene030079.t1 | AT3G51450 | 31.760 | 233 | 139 | 6 | 49 | 280 | 70 | 283 | 1.76e-28 | 113 |
| MS.gene030079.t1 | AT3G51420 | 30.973 | 226 | 136 | 6 | 49 | 273 | 70 | 276 | 5.72e-26 | 106 |
Find 81 sgRNAs with CRISPR-Local
Find 244 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCTTCGACTTTGGCTTCA+TGG | 0.205561 | 5.2:+77812314 | MS.gene030079:CDS |
| TAGGTGAAACTTCGACTTTC+CGG | 0.217649 | 5.2:+77812291 | MS.gene030079:CDS |
| GAAATTCAGATGGGCAGTTT+TGG | 0.258450 | 5.2:+77812399 | MS.gene030079:CDS |
| CTGTCCTTTGATCCAGAAAT+TGG | 0.265268 | 5.2:-77808990 | None:intergenic |
| CTTCTTAGCGGAGACAAAAC+TGG | 0.298940 | 5.2:+77812161 | MS.gene030079:CDS |
| CTTTCCGGATTCTTCGACTT+TGG | 0.322440 | 5.2:+77812306 | MS.gene030079:CDS |
| ATATTGACTTGGCCAGCATT+AGG | 0.334062 | 5.2:-77812338 | None:intergenic |
| TCCATTCGCACCAGAGTTAG+AGG | 0.369138 | 5.2:+77811557 | MS.gene030079:CDS |
| CAGGTTATCCGGACAATATA+AGG | 0.377879 | 5.2:+77812375 | MS.gene030079:CDS |
| TATTGACTTGGCCAGCATTA+GGG | 0.387491 | 5.2:-77812337 | None:intergenic |
| TACTGTTCTTCCAGGTTATC+CGG | 0.387839 | 5.2:+77812364 | MS.gene030079:CDS |
| CCATCCGCCACGCCGGTGTA+TGG | 0.411524 | 5.2:-77809092 | None:intergenic |
| CTCCATGTCACCGGAGCCGT+TGG | 0.420609 | 5.2:+77809032 | MS.gene030079:CDS |
| TGGCTTCATGGCCCTAATGC+TGG | 0.424712 | 5.2:+77812326 | MS.gene030079:CDS |
| GCTATAAAGTTGAGTGATGA+AGG | 0.432202 | 5.2:+77812440 | MS.gene030079:CDS |
| TTGCTGTCACTAGTTCCAAT+AGG | 0.439270 | 5.2:+77809159 | MS.gene030079:CDS |
| CTTATATTGTCCGGATAACC+TGG | 0.443834 | 5.2:-77812374 | None:intergenic |
| TTCACTAATGTCCATGTCAT+TGG | 0.446239 | 5.2:-77811733 | None:intergenic |
| GACGGTTTATTTCTTCTAGT+AGG | 0.447454 | 5.2:+77812272 | MS.gene030079:CDS |
| CCAGAGTTAGAGGATATTTG+TGG | 0.459327 | 5.2:+77811567 | MS.gene030079:CDS |
| GAATTTCTCCTTATATTGTC+CGG | 0.460285 | 5.2:-77812383 | None:intergenic |
| ACTCTCCGGCCCAACGGCTC+CGG | 0.460954 | 5.2:-77809042 | None:intergenic |
| GAAGTGAATGTCTTATTAAG+TGG | 0.467731 | 5.2:+77812215 | MS.gene030079:CDS |
| TCGCTTAAACAAACACCATT+GGG | 0.470347 | 5.2:-77812248 | None:intergenic |
| TATATTGTTGATGCCTACCT+TGG | 0.481015 | 5.2:+77811633 | MS.gene030079:CDS |
| TCCTCTAACTCTGGTGCGAA+TGG | 0.487071 | 5.2:-77811558 | None:intergenic |
| GAAGCCAAAGTCGAAGAATC+CGG | 0.487945 | 5.2:-77812310 | None:intergenic |
| AAACTATAAATACCAACATA+AGG | 0.492238 | 5.2:-77812557 | None:intergenic |
| TTCGCTTAAACAAACACCAT+TGG | 0.493925 | 5.2:-77812249 | None:intergenic |
| GCCCAACGGCTCCGGTGACA+TGG | 0.497514 | 5.2:-77809034 | None:intergenic |
| TGGATCAAAGGACAGTCTCC+AGG | 0.505663 | 5.2:+77808998 | MS.gene030079:CDS |
| CCACAAATATCCTCTAACTC+TGG | 0.512177 | 5.2:-77811567 | None:intergenic |
| CTGCAGGTCCTACTACGTTA+AGG | 0.516853 | 5.2:-77811656 | None:intergenic |
| GATATTTGTGGGAGGCCACT+AGG | 0.524182 | 5.2:+77811579 | MS.gene030079:CDS |
| ATGTCATTGGTGAAGCGAAA+AGG | 0.526768 | 5.2:-77811720 | None:intergenic |
| TCCATGTCACCGGAGCCGTT+GGG | 0.527613 | 5.2:+77809033 | MS.gene030079:CDS |
| TGTCACCGGAGCCGTTGGGC+CGG | 0.534102 | 5.2:+77809037 | MS.gene030079:CDS |
| CTTAACGTAGTAGGACCTGC+AGG | 0.540126 | 5.2:+77811657 | MS.gene030079:CDS |
| ACACCGGCGTGGCGGATGGA+CGG | 0.542691 | 5.2:+77809096 | MS.gene030079:CDS |
| TTATCAAATCTTAGTCCTAG+TGG | 0.547763 | 5.2:-77811594 | None:intergenic |
| CCATACACCGGCGTGGCGGA+TGG | 0.548384 | 5.2:+77809092 | MS.gene030079:CDS |
| CGCTTCACTGACATATCTCA+TGG | 0.548468 | 5.2:-77812492 | None:intergenic |
| AAGTGAATGTCTTATTAAGT+GGG | 0.550293 | 5.2:+77812216 | MS.gene030079:CDS |
| GGTTCCAATTTCTGGATCAA+AGG | 0.550697 | 5.2:+77808986 | MS.gene030079:CDS |
| TACCTTGGCCTTAACGTAGT+AGG | 0.551747 | 5.2:+77811648 | MS.gene030079:CDS |
| CAGAGTTAGAGGATATTTGT+GGG | 0.555272 | 5.2:+77811568 | MS.gene030079:CDS |
| AGGGGAAATATTAGAAATCG+TGG | 0.558229 | 5.2:+77812460 | MS.gene030079:CDS |
| GGTGTTTGTTTAAGCGAAGA+CGG | 0.560050 | 5.2:+77812254 | MS.gene030079:CDS |
| CATGGAGTAACCGATCAGCC+TGG | 0.564584 | 5.2:-77809016 | None:intergenic |
| TTCTTAGCGGAGACAAAACT+GGG | 0.567664 | 5.2:+77812162 | MS.gene030079:CDS |
| AGGACAGTCTCCAGGCTGAT+CGG | 0.569322 | 5.2:+77809006 | MS.gene030079:CDS |
| AGTGGGCTTAATTATCCCAA+TGG | 0.572203 | 5.2:+77812233 | MS.gene030079:CDS |
| AAGTATGAAGGGGAGGAACG+TGG | 0.583448 | 5.2:+77809125 | MS.gene030079:CDS |
| CAAGCAGAGTCTATCAGAGA+AGG | 0.584929 | 5.2:+77811784 | MS.gene030079:CDS |
| TATAAAGTTGAGTGATGAAG+GGG | 0.593424 | 5.2:+77812442 | MS.gene030079:CDS |
| GTCCTACTACGTTAAGGCCA+AGG | 0.595729 | 5.2:-77811650 | None:intergenic |
| AATCCGTCCATCCGCCACGC+CGG | 0.596699 | 5.2:-77809099 | None:intergenic |
| AATATAAGGAGAAATTCAGA+TGG | 0.600334 | 5.2:+77812389 | MS.gene030079:CDS |
| GAAATATTAGAAATCGTGGA+AGG | 0.606501 | 5.2:+77812464 | MS.gene030079:CDS |
| ATGAAGGGGAGGAACGTGGT+TGG | 0.613290 | 5.2:+77809129 | MS.gene030079:CDS |
| CATTGGTGAAGCGAAAAGGT+TGG | 0.618180 | 5.2:-77811716 | None:intergenic |
| GATCGGTTACTCCATGTCAC+CGG | 0.620224 | 5.2:+77809023 | MS.gene030079:CDS |
| AGCTTCTGTTGCTAACTGTG+TGG | 0.621050 | 5.2:-77811688 | None:intergenic |
| TCGGTGTTAATGCCTTATGT+TGG | 0.621568 | 5.2:+77812545 | MS.gene030079:CDS |
| GTGCAAGAAAAGTTGCAGCA+TGG | 0.622116 | 5.2:-77808932 | None:intergenic |
| CTATAAAGTTGAGTGATGAA+GGG | 0.622219 | 5.2:+77812441 | MS.gene030079:CDS |
| AACAAGACTCTCCGGCCCAA+CGG | 0.631984 | 5.2:-77809048 | None:intergenic |
| TTAACGTAGTAGGACCTGCA+GGG | 0.641562 | 5.2:+77811658 | MS.gene030079:CDS |
| CATGAGATATGTCAGTGAAG+CGG | 0.643807 | 5.2:+77812493 | MS.gene030079:CDS |
| CAGTTAGCAACAGAAGCTGA+AGG | 0.665226 | 5.2:+77811693 | MS.gene030079:CDS |
| ATATAAGGAGAAATTCAGAT+GGG | 0.667598 | 5.2:+77812390 | MS.gene030079:CDS |
| TCTCCGCTAAGAAGTAAAAG+CGG | 0.672637 | 5.2:-77812152 | None:intergenic |
| AATTTCAAGGTCGAACTGTG+TGG | 0.674077 | 5.2:+77811533 | MS.gene030079:intron |
| TACTACGTTAAGGCCAAGGT+AGG | 0.676893 | 5.2:-77811646 | None:intergenic |
| CACGGCGAAGGACCATACAC+CGG | 0.690062 | 5.2:+77809080 | MS.gene030079:CDS |
| TAACGTAGTAGGACCTGCAG+GGG | 0.691917 | 5.2:+77811659 | MS.gene030079:CDS |
| AGTTAGAGGATATTTGTGGG+AGG | 0.696868 | 5.2:+77811571 | MS.gene030079:CDS |
| AGGACCATACACCGGCGTGG+CGG | 0.710184 | 5.2:+77809088 | MS.gene030079:CDS |
| AACGTAGTAGGACCTGCAGG+GGG | 0.714485 | 5.2:+77811660 | MS.gene030079:CDS |
| CGAAGGACCATACACCGGCG+TGG | 0.716462 | 5.2:+77809085 | MS.gene030079:CDS |
| TTAGCGGAGACAAAACTGGG+AGG | 0.751407 | 5.2:+77812165 | MS.gene030079:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAATTATTAAAAAAAAAT+TGG | + | chr5.2:77810190-77810209 | MS.gene030079:intron | 0.0% |
| !!! | ATTTTAATATTTATAAATAT+GGG | - | chr5.2:77810364-77810383 | None:intergenic | 0.0% |
| !! | AGGTAAAAATAAAATAAAAA+TGG | + | chr5.2:77809424-77809443 | MS.gene030079:intron | 10.0% |
| !! | TTTGAAAAAAATATATAAGA+AGG | - | chr5.2:77809864-77809883 | None:intergenic | 10.0% |
| !!! | AATTTTATGAAAATTTATAG+GGG | - | chr5.2:77809930-77809949 | None:intergenic | 10.0% |
| !!! | ACAATTTTATGAAAATTTAT+AGG | - | chr5.2:77809932-77809951 | None:intergenic | 10.0% |
| !!! | ATTTTCATAAAATTGTAAAT+TGG | + | chr5.2:77809936-77809955 | MS.gene030079:intron | 10.0% |
| !!! | CAATTTTATGAAAATTTATA+GGG | - | chr5.2:77809931-77809950 | None:intergenic | 10.0% |
| !!! | TTCTTTATAAATAATTTGTT+TGG | - | chr5.2:77810575-77810594 | None:intergenic | 10.0% |
| !!! | TTTATAAATTCAAGATTTTT+GGG | - | chr5.2:77810068-77810087 | None:intergenic | 10.0% |
| !!! | TTTGAAAATTTTGAAAAATA+TGG | - | chr5.2:77809903-77809922 | None:intergenic | 10.0% |
| !!! | TTTGGAATTTTAAAAATTTT+AGG | - | chr5.2:77810432-77810451 | None:intergenic | 10.0% |
| !!! | TTTTAATAATTTAAAGTTCT+AGG | - | chr5.2:77810184-77810203 | None:intergenic | 10.0% |
| !!! | TTTTATAAATTCAAGATTTT+TGG | - | chr5.2:77810069-77810088 | None:intergenic | 10.0% |
| !!! | TTTTCATAAAATTGTAAATT+GGG | + | chr5.2:77809937-77809956 | MS.gene030079:intron | 10.0% |
| !! | AATTTGAAAATTGAAAAGTA+AGG | - | chr5.2:77810490-77810509 | None:intergenic | 15.0% |
| !! | ATTAAATTTGATCTATATGT+TGG | + | chr5.2:77812106-77812125 | MS.gene030079:intron | 15.0% |
| !! | TCAGTTATAAAAAAATTGTT+TGG | - | chr5.2:77810133-77810152 | None:intergenic | 15.0% |
| !!! | AATGATTAATACTTTGTTTT+TGG | + | chr5.2:77811916-77811935 | MS.gene030079:intron | 15.0% |
| !!! | AATTTCATTGTAATCATTTT+TGG | - | chr5.2:77810096-77810115 | None:intergenic | 15.0% |
| !!! | ATGATTAATACTTTGTTTTT+GGG | + | chr5.2:77811917-77811936 | MS.gene030079:intron | 15.0% |
| !!! | TACTACTTTTGTAAAAAAAA+AGG | - | chr5.2:77810516-77810535 | None:intergenic | 15.0% |
| !!! | TTATAAATTCAAGATTTTTG+GGG | - | chr5.2:77810067-77810086 | None:intergenic | 15.0% |
| !!! | TTGTTATTTTTTAAAACTGA+GGG | - | chr5.2:77809963-77809982 | None:intergenic | 15.0% |
| !!! | TTTGTTATTTTTTAAAACTG+AGG | - | chr5.2:77809964-77809983 | None:intergenic | 15.0% |
| !!! | TTTTTGGTACAATTTAATTT+TGG | + | chr5.2:77809244-77809263 | MS.gene030079:intron | 15.0% |
| !! | AAAATAAGCTAAAAATAGCT+TGG | + | chr5.2:77811057-77811076 | MS.gene030079:intron | 20.0% |
| !! | AAACTATAAATACCAACATA+AGG | - | chr5.2:77812560-77812579 | None:intergenic | 20.0% |
| !! | AAATAAGCTAAAAATAGCTT+GGG | + | chr5.2:77811058-77811077 | MS.gene030079:intron | 20.0% |
| !! | AATTTAGATTATTAGTGACT+AGG | + | chr5.2:77809340-77809359 | MS.gene030079:intron | 20.0% |
| !! | ACTTCTTGAATAATTTATAG+GGG | - | chr5.2:77810398-77810417 | None:intergenic | 20.0% |
| !! | ATACCAATAAAGAAAGAATT+TGG | - | chr5.2:77809220-77809239 | None:intergenic | 20.0% |
| !! | ATTTAGATTATTAGTGACTA+GGG | + | chr5.2:77809341-77809360 | MS.gene030079:intron | 20.0% |
| !! | CACTTCTTGAATAATTTATA+GGG | - | chr5.2:77810399-77810418 | None:intergenic | 20.0% |
| !! | CGAGAATAGTTTATAATTAT+GGG | + | chr5.2:77809561-77809580 | MS.gene030079:intron | 20.0% |
| !! | CTAAGATTTGATAAGAAAAA+TGG | + | chr5.2:77811603-77811622 | MS.gene030079:CDS | 20.0% |
| !! | TACACAATCACTATAAAAAA+TGG | - | chr5.2:77812021-77812040 | None:intergenic | 20.0% |
| !! | TCAAAAAAAATTGAGTTAAG+TGG | + | chr5.2:77810840-77810859 | MS.gene030079:intron | 20.0% |
| !! | TCGAGAATAGTTTATAATTA+TGG | + | chr5.2:77809560-77809579 | MS.gene030079:intron | 20.0% |
| !! | TGTAATTGAATCATTTGAAT+TGG | + | chr5.2:77810605-77810624 | MS.gene030079:intron | 20.0% |
| !! | TTTCCAAATTCTTTCTTTAT+TGG | + | chr5.2:77809214-77809233 | MS.gene030079:intron | 20.0% |
| !!! | AAACATACTCTAAAAAGTTA+GGG | + | chr5.2:77810668-77810687 | MS.gene030079:intron | 20.0% |
| !!! | ACTTAACTCAATTTTTTTTG+AGG | - | chr5.2:77810841-77810860 | None:intergenic | 20.0% |
| !!! | ATATCGAGAAGTATATTTAA+GGG | - | chr5.2:77809539-77809558 | None:intergenic | 20.0% |
| !!! | ATTTTTACCTAATAATCTAG+TGG | - | chr5.2:77809414-77809433 | None:intergenic | 20.0% |
| !!! | ATTTTTCAAATTTTGCAAGT+TGG | + | chr5.2:77810335-77810354 | MS.gene030079:intron | 20.0% |
| !!! | CTTTATTGGTATTCTTTTTT+TGG | + | chr5.2:77809228-77809247 | MS.gene030079:intron | 20.0% |
| !!! | GAAATTTTGAAATTTGATAG+GGG | - | chr5.2:77810044-77810063 | None:intergenic | 20.0% |
| !!! | GCAAATTTTGAAAAAATTGA+GGG | - | chr5.2:77810459-77810478 | None:intergenic | 20.0% |
| !!! | GGAAATTTTGAAATTTGATA+GGG | - | chr5.2:77810045-77810064 | None:intergenic | 20.0% |
| !!! | TAAACATACTCTAAAAAGTT+AGG | + | chr5.2:77810667-77810686 | MS.gene030079:intron | 20.0% |
| !!! | TAAATAATTTGTTTGGATAG+AGG | - | chr5.2:77810568-77810587 | None:intergenic | 20.0% |
| !!! | TATAAATTCAAGATTTTTGG+GGG | - | chr5.2:77810066-77810085 | None:intergenic | 20.0% |
| !!! | TCTCAGTTTAATTTTTTTCA+TGG | + | chr5.2:77811373-77811392 | MS.gene030079:intron | 20.0% |
| !!! | TGCAAATTTTGAAAAAATTG+AGG | - | chr5.2:77810460-77810479 | None:intergenic | 20.0% |
| !!! | TTTCATTTAATCTTTTGTTG+TGG | - | chr5.2:77810978-77810997 | None:intergenic | 20.0% |
| !!! | TTTTTCAAATTTTGCAAGTT+GGG | + | chr5.2:77810336-77810355 | MS.gene030079:intron | 20.0% |
| !!! | TTTTTTCAAAATTTGCAGTT+TGG | + | chr5.2:77810463-77810482 | MS.gene030079:intron | 20.0% |
| ! | AAAATAAAAATGGTGTGACA+TGG | + | chr5.2:77809434-77809453 | MS.gene030079:intron | 25.0% |
| ! | AACAATGAAATTTAGCTAGA+AGG | - | chr5.2:77810268-77810287 | None:intergenic | 25.0% |
| ! | AATATAAGGAGAAATTCAGA+TGG | + | chr5.2:77812389-77812408 | MS.gene030079:CDS | 25.0% |
| ! | ATACCAATAAAGGAAGAATT+TGG | - | chr5.2:77809285-77809304 | None:intergenic | 25.0% |
| ! | ATATAAGGAGAAATTCAGAT+GGG | + | chr5.2:77812390-77812409 | MS.gene030079:CDS | 25.0% |
| ! | ATGATTGAATTGAATGTACT+GGG | + | chr5.2:77809673-77809692 | MS.gene030079:intron | 25.0% |
| ! | CAAAAGAAGAATACCAATAA+AGG | - | chr5.2:77809295-77809314 | None:intergenic | 25.0% |
| ! | GAAAAAATTGAGGGTTAATT+TGG | - | chr5.2:77810450-77810469 | None:intergenic | 25.0% |
| ! | GCACTTCTTGAATAATTTAT+AGG | - | chr5.2:77810400-77810419 | None:intergenic | 25.0% |
| ! | GTAATAGAAATATGCACATT+TGG | + | chr5.2:77809181-77809200 | MS.gene030079:intron | 25.0% |
| ! | TCTAGCTAAATTTCATTGTT+TGG | + | chr5.2:77810268-77810287 | MS.gene030079:intron | 25.0% |
| ! | TTTCCAAATTCTTCCTTTAT+TGG | + | chr5.2:77809279-77809298 | MS.gene030079:intron | 25.0% |
| !! | AAAGATGGAAAACTTTTGAT+TGG | + | chr5.2:77812521-77812540 | MS.gene030079:CDS | 25.0% |
| !! | AAGTGAATGTCTTATTAAGT+GGG | + | chr5.2:77812216-77812235 | MS.gene030079:CDS | 25.0% |
| !! | CTTTATTGGTATTCTTCTTT+TGG | + | chr5.2:77809293-77809312 | MS.gene030079:intron | 25.0% |
| !! | GAACAGTAAAAATATTGACT+TGG | - | chr5.2:77812352-77812371 | None:intergenic | 25.0% |
| !! | GATATCGAGAAGTATATTTA+AGG | - | chr5.2:77809540-77809559 | None:intergenic | 25.0% |
| !! | GATTAGTTGTATGAATTTCA+AGG | + | chr5.2:77811520-77811539 | MS.gene030079:intron | 25.0% |
| !! | TATCGAGAAGTATATTTAAG+GGG | - | chr5.2:77809538-77809557 | None:intergenic | 25.0% |
| !! | TGCATATTTCTATTACCTAT+TGG | - | chr5.2:77809177-77809196 | None:intergenic | 25.0% |
| !!! | AAAGTTCTAGGAAATTCAAA+TGG | - | chr5.2:77810172-77810191 | None:intergenic | 25.0% |
| !!! | AAAGTTGATGGTAGAAAATA+AGG | - | chr5.2:77811831-77811850 | None:intergenic | 25.0% |
| !!! | AATATTTTTACTGTTCTTCC+AGG | + | chr5.2:77812356-77812375 | MS.gene030079:CDS | 25.0% |
| !!! | GGGAAATTTTGAAATTTGAT+AGG | - | chr5.2:77810046-77810065 | None:intergenic | 25.0% |
| !!! | TTTTTTCAAATCTTGCAAGT+TGG | + | chr5.2:77809874-77809893 | MS.gene030079:intron | 25.0% |
| AAAAATTGAGTTAAGTGGCA+TGG | + | chr5.2:77810845-77810864 | MS.gene030079:intron | 30.0% | |
| AAACATACCCTTATTCTACA+AGG | + | chr5.2:77811167-77811186 | MS.gene030079:intron | 30.0% | |
| AAAGAAAGAATTTGGAAACG+TGG | - | chr5.2:77809212-77809231 | None:intergenic | 30.0% | |
| CAAAATGCAGATAAAGTTGA+TGG | - | chr5.2:77811843-77811862 | None:intergenic | 30.0% | |
| CTATAAAGTTGAGTGATGAA+GGG | + | chr5.2:77812441-77812460 | MS.gene030079:CDS | 30.0% | |
| CTCAATGAAATTTACCTAGA+AGG | - | chr5.2:77809727-77809746 | None:intergenic | 30.0% | |
| GAAATATTAGAAATCGTGGA+AGG | + | chr5.2:77812464-77812483 | MS.gene030079:CDS | 30.0% | |
| GAATTTCTCCTTATATTGTC+CGG | - | chr5.2:77812386-77812405 | None:intergenic | 30.0% | |
| GATGATTGAATTGAATGTAC+TGG | + | chr5.2:77809672-77809691 | MS.gene030079:intron | 30.0% | |
| GATGTAAAGAGTAAAGTCAA+GGG | - | chr5.2:77809610-77809629 | None:intergenic | 30.0% | |
| TAAAAGACTTAGACGTTGTT+TGG | + | chr5.2:77810886-77810905 | MS.gene030079:intron | 30.0% | |
| TATAAAGTTGAGTGATGAAG+GGG | + | chr5.2:77812442-77812461 | MS.gene030079:CDS | 30.0% | |
| TGAAAAATCACACGCTTAAA+TGG | - | chr5.2:77810785-77810804 | None:intergenic | 30.0% | |
| TGATGTAAAGAGTAAAGTCA+AGG | - | chr5.2:77809611-77809630 | None:intergenic | 30.0% | |
| TTATCAAATCTTAGTCCTAG+TGG | - | chr5.2:77811597-77811616 | None:intergenic | 30.0% | |
| ! | ATGAAACCGTTTGAAACAAA+AGG | - | chr5.2:77811219-77811238 | None:intergenic | 30.0% |
| ! | ATTATTCAAGAAGTGCAAGT+TGG | + | chr5.2:77810404-77810423 | MS.gene030079:intron | 30.0% |
| ! | GAAGTGAATGTCTTATTAAG+TGG | + | chr5.2:77812215-77812234 | MS.gene030079:CDS | 30.0% |
| ! | TAAGACACTAAAAGTGTGTT+TGG | + | chr5.2:77809650-77809669 | MS.gene030079:intron | 30.0% |
| !! | AGAGCTTTGAAAAACAACTT+AGG | - | chr5.2:77811092-77811111 | None:intergenic | 30.0% |
| !! | TCTCTACCTTTTGTTTCAAA+CGG | + | chr5.2:77811210-77811229 | MS.gene030079:intron | 30.0% |
| !! | TGGAAAACTTTTGATTGGAT+CGG | + | chr5.2:77812526-77812545 | MS.gene030079:CDS | 30.0% |
| !!! | AGTCTTGTTTTTGATAGTCA+CGG | + | chr5.2:77809062-77809081 | MS.gene030079:CDS | 30.0% |
| AAAATCACACGCTTAAATGG+AGG | - | chr5.2:77810782-77810801 | None:intergenic | 35.0% | |
| AAAGGAAGAATTTGGAAACG+TGG | - | chr5.2:77809277-77809296 | None:intergenic | 35.0% | |
| ACCCCTCAAAATTTGCAAAT+TGG | + | chr5.2:77810018-77810037 | MS.gene030079:intron | 35.0% | |
| AGCTTCACCACTAGATTATT+AGG | + | chr5.2:77809404-77809423 | MS.gene030079:intron | 35.0% | |
| AGGGGAAATATTAGAAATCG+TGG | + | chr5.2:77812460-77812479 | MS.gene030079:CDS | 35.0% | |
| ATTATTAGTGACTAGGGAGT+AGG | + | chr5.2:77809347-77809366 | MS.gene030079:intron | 35.0% | |
| ATTGTTTGAGAATGCAAGCA+AGG | + | chr5.2:77811240-77811259 | MS.gene030079:intron | 35.0% | |
| CAGAGTTAGAGGATATTTGT+GGG | + | chr5.2:77811568-77811587 | MS.gene030079:CDS | 35.0% | |
| CTATCAAAAACAAGACTCTC+CGG | - | chr5.2:77809059-77809078 | None:intergenic | 35.0% | |
| GAATTTCGCTATGTTTAGCT+TGG | - | chr5.2:77809805-77809824 | None:intergenic | 35.0% | |
| GAGAGAATTCAAATCCTTCT+AGG | + | chr5.2:77809710-77809729 | MS.gene030079:intron | 35.0% | |
| GCTATAAAGTTGAGTGATGA+AGG | + | chr5.2:77812440-77812459 | MS.gene030079:CDS | 35.0% | |
| GTCACTTGATCTATAACTTG+TGG | - | chr5.2:77810702-77810721 | None:intergenic | 35.0% | |
| TAAAAATGGTGTGACATGGT+TGG | + | chr5.2:77809438-77809457 | MS.gene030079:intron | 35.0% | |
| TATATTGTTGATGCCTACCT+TGG | + | chr5.2:77811633-77811652 | MS.gene030079:CDS | 35.0% | |
| TCATGCCAAAATTGCTAGAT+CGG | + | chr5.2:77810724-77810743 | MS.gene030079:intron | 35.0% | |
| TCGCTTAAACAAACACCATT+GGG | - | chr5.2:77812251-77812270 | None:intergenic | 35.0% | |
| TTATTAGTGACTAGGGAGTA+GGG | + | chr5.2:77809348-77809367 | MS.gene030079:intron | 35.0% | |
| TTCACTAATGTCCATGTCAT+TGG | - | chr5.2:77811736-77811755 | None:intergenic | 35.0% | |
| TTCGCTTAAACAAACACCAT+TGG | - | chr5.2:77812252-77812271 | None:intergenic | 35.0% | |
| TTGCTTGCCTTGTAGAATAA+GGG | - | chr5.2:77811177-77811196 | None:intergenic | 35.0% | |
| TTTGCTTGCCTTGTAGAATA+AGG | - | chr5.2:77811178-77811197 | None:intergenic | 35.0% | |
| ! | AAATTCAGATGGGCAGTTTT+GGG | + | chr5.2:77812400-77812419 | MS.gene030079:CDS | 35.0% |
| ! | AACCTTGTTGTACATATCCT+CGG | - | chr5.2:77811429-77811448 | None:intergenic | 35.0% |
| ! | AATGTCCGATCTAGCAATTT+TGG | - | chr5.2:77810732-77810751 | None:intergenic | 35.0% |
| ! | CATCTTTGCACTCTTTTCAT+CGG | + | chr5.2:77808965-77808984 | MS.gene030079:CDS | 35.0% |
| ! | CTCTAAAAAGTTAGGGTCAA+TGG | + | chr5.2:77810675-77810694 | MS.gene030079:intron | 35.0% |
| ! | GACGGTTTATTTCTTCTAGT+AGG | + | chr5.2:77812272-77812291 | MS.gene030079:CDS | 35.0% |
| ! | GCCAATTTGCAAATTTTGAG+GGG | - | chr5.2:77810022-77810041 | None:intergenic | 35.0% |
| ! | GGCCAATTTGCAAATTTTGA+GGG | - | chr5.2:77810023-77810042 | None:intergenic | 35.0% |
| ! | TCTAAGATTGGATGTTTCGA+GGG | + | chr5.2:77810233-77810252 | MS.gene030079:intron | 35.0% |
| !! | ACATGGTTGGTAGATGTTAA+GGG | + | chr5.2:77809451-77809470 | MS.gene030079:intron | 35.0% |
| !! | ATTCCGCTTTTACTTCTTAG+CGG | + | chr5.2:77812149-77812168 | MS.gene030079:CDS | 35.0% |
| !! | CATTCAAACACCTCTAAGAT+TGG | + | chr5.2:77810221-77810240 | MS.gene030079:intron | 35.0% |
| !! | GCAAATTTTGAGGGGTTAAA+TGG | - | chr5.2:77810014-77810033 | None:intergenic | 35.0% |
| !!! | AATAGCTACTTTTTTGTCCG+AGG | + | chr5.2:77811409-77811428 | MS.gene030079:intron | 35.0% |
| !!! | ACGGATTTTGAAGTATGAAG+GGG | + | chr5.2:77809115-77809134 | MS.gene030079:CDS | 35.0% |
| !!! | GACGGATTTTGAAGTATGAA+GGG | + | chr5.2:77809114-77809133 | MS.gene030079:CDS | 35.0% |
| !!! | TGTTGGTCACTTTTGTTTGT+AGG | + | chr5.2:77812123-77812142 | MS.gene030079:intron | 35.0% |
| !!! | TTTTCATCGGTTCCAATTTC+TGG | + | chr5.2:77808978-77808997 | MS.gene030079:CDS | 35.0% |
| AAACCCTAGCGATACTGTTT+GGG | - | chr5.2:77811115-77811134 | None:intergenic | 40.0% | |
| AATTTCAAGGTCGAACTGTG+TGG | + | chr5.2:77811533-77811552 | MS.gene030079:intron | 40.0% | |
| AGTGAAGCGGATGAAAAAGA+TGG | + | chr5.2:77812506-77812525 | MS.gene030079:CDS | 40.0% | |
| AGTTAGAGGATATTTGTGGG+AGG | + | chr5.2:77811571-77811590 | MS.gene030079:CDS | 40.0% | |
| ATCGCTAGGGTTTATGTAAG+TGG | + | chr5.2:77811122-77811141 | MS.gene030079:intron | 40.0% | |
| ATGTCATTGGTGAAGCGAAA+AGG | - | chr5.2:77811723-77811742 | None:intergenic | 40.0% | |
| CAGGTTATCCGGACAATATA+AGG | + | chr5.2:77812375-77812394 | MS.gene030079:CDS | 40.0% | |
| CATGAGATATGTCAGTGAAG+CGG | + | chr5.2:77812493-77812512 | MS.gene030079:CDS | 40.0% | |
| CCACAAATATCCTCTAACTC+TGG | - | chr5.2:77811570-77811589 | None:intergenic | 40.0% | |
| CCAGAGTTAGAGGATATTTG+TGG | + | chr5.2:77811567-77811586 | MS.gene030079:CDS | 40.0% | |
| CTCGAAACATCCAATCTTAG+AGG | - | chr5.2:77810234-77810253 | None:intergenic | 40.0% | |
| CTGTCCTTTGATCCAGAAAT+TGG | - | chr5.2:77808993-77809012 | None:intergenic | 40.0% | |
| CTTATATTGTCCGGATAACC+TGG | - | chr5.2:77812377-77812396 | None:intergenic | 40.0% | |
| GGAGTAGGGAGACTTAAATT+GGG | + | chr5.2:77809362-77809381 | MS.gene030079:intron | 40.0% | |
| GGAGTCTCTTAAGCATATGT+GGG | + | chr5.2:77809472-77809491 | MS.gene030079:intron | 40.0% | |
| GGTGTTTGTTTAAGCGAAGA+CGG | + | chr5.2:77812254-77812273 | MS.gene030079:CDS | 40.0% | |
| TAAACCCTAGCGATACTGTT+TGG | - | chr5.2:77811116-77811135 | None:intergenic | 40.0% | |
| TACTGTTCTTCCAGGTTATC+CGG | + | chr5.2:77812364-77812383 | MS.gene030079:CDS | 40.0% | |
| TAGGTGAAACTTCGACTTTC+CGG | + | chr5.2:77812291-77812310 | MS.gene030079:CDS | 40.0% | |
| TCTCCGCTAAGAAGTAAAAG+CGG | - | chr5.2:77812155-77812174 | None:intergenic | 40.0% | |
| TGTTCGCTTGAGTTCAGATA+GGG | + | chr5.2:77811952-77811971 | MS.gene030079:intron | 40.0% | |
| TTCTTAGCGGAGACAAAACT+GGG | + | chr5.2:77812162-77812181 | MS.gene030079:CDS | 40.0% | |
| TTGCTGTCACTAGTTCCAAT+AGG | + | chr5.2:77809159-77809178 | MS.gene030079:CDS | 40.0% | |
| TTGTTCGCTTGAGTTCAGAT+AGG | + | chr5.2:77811951-77811970 | MS.gene030079:intron | 40.0% | |
| ! | AGTGGGCTTAATTATCCCAA+TGG | + | chr5.2:77812233-77812252 | MS.gene030079:CDS | 40.0% |
| ! | ATTCTTCGACTTTGGCTTCA+TGG | + | chr5.2:77812314-77812333 | MS.gene030079:CDS | 40.0% |
| ! | GAAATTCAGATGGGCAGTTT+TGG | + | chr5.2:77812399-77812418 | MS.gene030079:CDS | 40.0% |
| ! | GGGCCAATTTGCAAATTTTG+AGG | - | chr5.2:77810024-77810043 | None:intergenic | 40.0% |
| ! | GGTTCCAATTTCTGGATCAA+AGG | + | chr5.2:77808986-77809005 | MS.gene030079:CDS | 40.0% |
| ! | TTTTCGCTTCACCAATGACA+TGG | + | chr5.2:77811722-77811741 | MS.gene030079:CDS | 40.0% |
| !! | ATATTGACTTGGCCAGCATT+AGG | - | chr5.2:77812341-77812360 | None:intergenic | 40.0% |
| !! | CTCTAAGATTGGATGTTTCG+AGG | + | chr5.2:77810232-77810251 | MS.gene030079:intron | 40.0% |
| !! | GACATGGTTGGTAGATGTTA+AGG | + | chr5.2:77809450-77809469 | MS.gene030079:intron | 40.0% |
| !! | TATTGACTTGGCCAGCATTA+GGG | - | chr5.2:77812340-77812359 | None:intergenic | 40.0% |
| !! | TCGGTGTTAATGCCTTATGT+TGG | + | chr5.2:77812545-77812564 | MS.gene030079:CDS | 40.0% |
| !!! | GATTTTGAAGTATGAAGGGG+AGG | + | chr5.2:77809118-77809137 | MS.gene030079:CDS | 40.0% |
| !!! | GGACGGATTTTGAAGTATGA+AGG | + | chr5.2:77809113-77809132 | MS.gene030079:CDS | 40.0% |
| AGCTTCTGTTGCTAACTGTG+TGG | - | chr5.2:77811691-77811710 | None:intergenic | 45.0% | |
| CAAGCAGAGTCTATCAGAGA+AGG | + | chr5.2:77811784-77811803 | MS.gene030079:CDS | 45.0% | |
| CAGTTAGCAACAGAAGCTGA+AGG | + | chr5.2:77811693-77811712 | MS.gene030079:CDS | 45.0% | |
| CATTGGTGAAGCGAAAAGGT+TGG | - | chr5.2:77811719-77811738 | None:intergenic | 45.0% | |
| CGCTTCACTGACATATCTCA+TGG | - | chr5.2:77812495-77812514 | None:intergenic | 45.0% | |
| CTTCTTAGCGGAGACAAAAC+TGG | + | chr5.2:77812161-77812180 | MS.gene030079:CDS | 45.0% | |
| CTTGAGTTCAGATAGGGAGA+TGG | + | chr5.2:77811958-77811977 | MS.gene030079:intron | 45.0% | |
| CTTTCCGGATTCTTCGACTT+TGG | + | chr5.2:77812306-77812325 | MS.gene030079:CDS | 45.0% | |
| GAAGCCAAAGTCGAAGAATC+CGG | - | chr5.2:77812313-77812332 | None:intergenic | 45.0% | |
| GCTAGATCGGACATTGTAAC+CGG | + | chr5.2:77810737-77810756 | MS.gene030079:intron | 45.0% | |
| GGGAGTAGGGAGACTTAAAT+TGG | + | chr5.2:77809361-77809380 | MS.gene030079:intron | 45.0% | |
| GGGAGTCTCTTAAGCATATG+TGG | + | chr5.2:77809471-77809490 | MS.gene030079:intron | 45.0% | |
| GTCCGAGGATATGTACAACA+AGG | + | chr5.2:77811424-77811443 | MS.gene030079:intron | 45.0% | |
| GTGCAAGAAAAGTTGCAGCA+TGG | - | chr5.2:77808935-77808954 | None:intergenic | 45.0% | |
| TACTACGTTAAGGCCAAGGT+AGG | - | chr5.2:77811649-77811668 | None:intergenic | 45.0% | |
| TCTCCCAAACAGTATCGCTA+GGG | + | chr5.2:77811109-77811128 | MS.gene030079:intron | 45.0% | |
| TTAACGTAGTAGGACCTGCA+GGG | + | chr5.2:77811658-77811677 | MS.gene030079:CDS | 45.0% | |
| !! | GTTTTTGATAGTCACGGCGA+AGG | + | chr5.2:77809068-77809087 | MS.gene030079:CDS | 45.0% |
| !! | TACCTTGGCCTTAACGTAGT+AGG | + | chr5.2:77811648-77811667 | MS.gene030079:CDS | 45.0% |
| !! | AAAAAAAAAAATTAATTGTA+AGG | - | chr5.2:77812061-77812080 | None:intergenic | 5.0% |
| !! | AAAATGATTTATAATTTATA+TGG | - | chr5.2:77811012-77811031 | None:intergenic | 5.0% |
| !!! | CATTTTAATATTTATAAATA+TGG | - | chr5.2:77810365-77810384 | None:intergenic | 5.0% |
| AACCGGAGTTTCAACCCCAA+CGG | + | chr5.2:77810754-77810773 | MS.gene030079:intron | 50.0% | |
| AAGTATGAAGGGGAGGAACG+TGG | + | chr5.2:77809125-77809144 | MS.gene030079:CDS | 50.0% | |
| CTCTCCCAAACAGTATCGCT+AGG | + | chr5.2:77811108-77811127 | MS.gene030079:intron | 50.0% | |
| CTGCAGGTCCTACTACGTTA+AGG | - | chr5.2:77811659-77811678 | None:intergenic | 50.0% | |
| CTTAAATGGAGGAGCCGTTG+GGG | - | chr5.2:77810771-77810790 | None:intergenic | 50.0% | |
| CTTAACGTAGTAGGACCTGC+AGG | + | chr5.2:77811657-77811676 | MS.gene030079:CDS | 50.0% | |
| GAGTTCAGATAGGGAGATGG+TGG | + | chr5.2:77811961-77811980 | MS.gene030079:intron | 50.0% | |
| GATATTTGTGGGAGGCCACT+AGG | + | chr5.2:77811579-77811598 | MS.gene030079:CDS | 50.0% | |
| GATCGGTTACTCCATGTCAC+CGG | + | chr5.2:77809023-77809042 | MS.gene030079:CDS | 50.0% | |
| GCTTAAATGGAGGAGCCGTT+GGG | - | chr5.2:77810772-77810791 | None:intergenic | 50.0% | |
| GTCCTACTACGTTAAGGCCA+AGG | - | chr5.2:77811653-77811672 | None:intergenic | 50.0% | |
| TAACGTAGTAGGACCTGCAG+GGG | + | chr5.2:77811659-77811678 | MS.gene030079:CDS | 50.0% | |
| TCCATTCGCACCAGAGTTAG+AGG | + | chr5.2:77811557-77811576 | MS.gene030079:CDS | 50.0% | |
| TCCTCTAACTCTGGTGCGAA+TGG | - | chr5.2:77811561-77811580 | None:intergenic | 50.0% | |
| TGGATCAAAGGACAGTCTCC+AGG | + | chr5.2:77808998-77809017 | MS.gene030079:CDS | 50.0% | |
| TTAGCGGAGACAAAACTGGG+AGG | + | chr5.2:77812165-77812184 | MS.gene030079:CDS | 50.0% | |
| ! | ATAGGGAGATGGTGGCTTTG+AGG | + | chr5.2:77811969-77811988 | MS.gene030079:intron | 50.0% |
| AACAAGACTCTCCGGCCCAA+CGG | - | chr5.2:77809051-77809070 | None:intergenic | 55.0% | |
| AACGTAGTAGGACCTGCAGG+GGG | + | chr5.2:77811660-77811679 | MS.gene030079:CDS | 55.0% | |
| AGCCGTTGGGGTTGAAACTC+CGG | - | chr5.2:77810759-77810778 | None:intergenic | 55.0% | |
| AGGACAGTCTCCAGGCTGAT+CGG | + | chr5.2:77809006-77809025 | MS.gene030079:CDS | 55.0% | |
| ATGAAGGGGAGGAACGTGGT+TGG | + | chr5.2:77809129-77809148 | MS.gene030079:CDS | 55.0% | |
| CATGGAGTAACCGATCAGCC+TGG | - | chr5.2:77809019-77809038 | None:intergenic | 55.0% | |
| CGCTTAAATGGAGGAGCCGT+TGG | - | chr5.2:77810773-77810792 | None:intergenic | 55.0% | |
| TGGCTTCATGGCCCTAATGC+TGG | + | chr5.2:77812326-77812345 | MS.gene030079:CDS | 55.0% | |
| AGTAGGACCTGCAGGGGGTT+TGG | + | chr5.2:77811665-77811684 | MS.gene030079:CDS | 60.0% | |
| CACGGCGAAGGACCATACAC+CGG | + | chr5.2:77809080-77809099 | MS.gene030079:CDS | 60.0% | |
| TCCATGTCACCGGAGCCGTT+GGG | + | chr5.2:77809033-77809052 | MS.gene030079:CDS | 60.0% | |
| AATCCGTCCATCCGCCACGC+CGG | - | chr5.2:77809102-77809121 | None:intergenic | 65.0% | |
| AGGACCATACACCGGCGTGG+CGG | + | chr5.2:77809088-77809107 | MS.gene030079:CDS | 65.0% | |
| CGAAGGACCATACACCGGCG+TGG | + | chr5.2:77809085-77809104 | MS.gene030079:CDS | 65.0% | |
| CTCCATGTCACCGGAGCCGT+TGG | + | chr5.2:77809032-77809051 | MS.gene030079:CDS | 65.0% | |
| TGTGTGGCCAAACCCCCTGC+AGG | - | chr5.2:77811675-77811694 | None:intergenic | 65.0% | |
| ACTCTCCGGCCCAACGGCTC+CGG | - | chr5.2:77809045-77809064 | None:intergenic | 70.0% | |
| CCATCCGCCACGCCGGTGTA+TGG | - | chr5.2:77809095-77809114 | None:intergenic | 70.0% | |
| GCCCAACGGCTCCGGTGACA+TGG | - | chr5.2:77809037-77809056 | None:intergenic | 70.0% | |
| TGTCACCGGAGCCGTTGGGC+CGG | + | chr5.2:77809037-77809056 | MS.gene030079:CDS | 70.0% | |
| ! | CCATACACCGGCGTGGCGGA+TGG | + | chr5.2:77809092-77809111 | MS.gene030079:CDS | 70.0% |
| !! | ACACCGGCGTGGCGGATGGA+CGG | + | chr5.2:77809096-77809115 | MS.gene030079:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 77808912 | 77812583 | 77808912 | ID=MS.gene030079 |
| chr5.2 | mRNA | 77808912 | 77812583 | 77808912 | ID=MS.gene030079.t1;Parent=MS.gene030079 |
| chr5.2 | exon | 77808912 | 77809180 | 77808912 | ID=MS.gene030079.t1.exon1;Parent=MS.gene030079.t1 |
| chr5.2 | CDS | 77808912 | 77809180 | 77808912 | ID=cds.MS.gene030079.t1;Parent=MS.gene030079.t1 |
| chr5.2 | exon | 77811542 | 77811805 | 77811542 | ID=MS.gene030079.t1.exon2;Parent=MS.gene030079.t1 |
| chr5.2 | CDS | 77811542 | 77811805 | 77811542 | ID=cds.MS.gene030079.t1;Parent=MS.gene030079.t1 |
| chr5.2 | exon | 77812145 | 77812583 | 77812145 | ID=MS.gene030079.t1.exon3;Parent=MS.gene030079.t1 |
| chr5.2 | CDS | 77812145 | 77812583 | 77812145 | ID=cds.MS.gene030079.t1;Parent=MS.gene030079.t1 |
| Gene Sequence |
| Protein sequence |
