AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene030103

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene030103.t1 MTR_4g122640 97.619 336 6 1 1 334 1 336 0.0 675
MS.gene030103.t1 MTR_8g076820 49.836 305 147 3 35 334 27 330 1.04e-103 307
MS.gene030103.t1 MTR_7g072510 51.839 299 136 3 38 334 20 312 1.53e-102 304
MS.gene030103.t1 MTR_5g021060 50.000 308 148 3 32 334 24 330 2.56e-102 304
MS.gene030103.t1 MTR_5g083860 46.450 338 159 5 1 334 6 325 1.53e-100 299
MS.gene030103.t1 MTR_3g094650 50.831 301 138 4 38 334 28 322 1.71e-100 299
MS.gene030103.t1 MTR_5g014100 50.327 306 143 3 38 334 26 331 7.75e-100 298
MS.gene030103.t1 MTR_4g125940 50.000 306 144 4 36 334 26 329 4.15e-98 293
MS.gene030103.t1 MTR_4g083710 50.000 302 142 4 38 334 27 324 5.23e-98 293
MS.gene030103.t1 MTR_1g022970 47.262 347 170 4 1 334 1 347 7.91e-98 293
MS.gene030103.t1 MTR_3g072190 50.327 306 144 3 31 334 19 318 2.36e-96 288
MS.gene030103.t1 MTR_7g072480 50.502 299 140 3 38 334 24 316 2.66e-96 288
MS.gene030103.t1 MTR_4g029170 48.860 307 147 5 32 334 21 321 1.13e-95 286
MS.gene030103.t1 MTR_2g040000 48.837 301 144 4 42 334 33 331 1.29e-95 287
MS.gene030103.t1 MTR_4g029200 48.852 305 148 3 32 334 40 338 6.16e-95 285
MS.gene030103.t1 MTR_3g094670 50.498 301 139 4 38 334 28 322 1.18e-93 281
MS.gene030103.t1 MTR_3g466200 48.344 302 145 5 38 334 25 320 3.08e-93 280
MS.gene030103.t1 MTR_5g074970 50.492 305 139 5 36 334 28 326 7.65e-93 280
MS.gene030103.t1 MTR_5g017860 46.269 335 157 6 5 334 10 326 1.17e-92 279
MS.gene030103.t1 MTR_4g029190 49.320 294 139 4 45 334 53 340 6.21e-92 278
MS.gene030103.t1 MTR_5g017850 49.013 304 148 5 36 334 25 326 9.20e-92 277
MS.gene030103.t1 MTR_2g029560 46.026 302 158 3 38 334 24 325 1.63e-91 277
MS.gene030103.t1 MTR_2g029750 47.195 303 153 4 38 334 29 330 1.97e-91 277
MS.gene030103.t1 MTR_4g125940 51.636 275 124 4 67 334 2 274 3.63e-91 273
MS.gene030103.t1 MTR_2g084020 44.884 303 160 2 34 334 21 318 2.71e-90 273
MS.gene030103.t1 MTR_2g029800 44.551 312 160 5 35 334 20 330 4.54e-90 273
MS.gene030103.t1 MTR_2g029730 46.689 302 156 3 38 334 25 326 5.59e-90 273
MS.gene030103.t1 MTR_4g074995 48.013 302 135 5 38 334 24 308 6.30e-90 271
MS.gene030103.t1 MTR_1g054205 46.865 303 155 4 38 334 24 326 7.72e-90 272
MS.gene030103.t1 MTR_3g094630 49.502 301 142 4 38 334 28 322 2.59e-89 270
MS.gene030103.t1 MTR_7g093370 45.875 303 158 4 38 334 69 371 2.77e-89 272
MS.gene030103.t1 MTR_2g084010 44.554 303 161 2 34 334 21 318 4.19e-89 270
MS.gene030103.t1 MTR_2g029815 46.535 303 155 4 38 334 29 330 1.07e-88 270
MS.gene030103.t1 MTR_3g466180 49.498 299 143 3 38 334 31 323 1.77e-88 268
MS.gene030103.t1 MTR_5g049280 46.602 309 149 8 38 334 33 337 2.74e-88 268
MS.gene030103.t1 MTR_4g029180 47.315 298 147 5 41 334 30 321 8.93e-88 266
MS.gene030103.t1 MTR_2g084080 42.515 334 169 4 3 334 5 317 1.28e-87 266
MS.gene030103.t1 MTR_5g074860 47.333 300 146 6 38 331 29 322 1.51e-87 266
MS.gene030103.t1 MTR_2g029860 44.272 323 173 4 18 334 9 330 7.72e-87 265
MS.gene030103.t1 MTR_2g084000 43.813 299 161 2 38 334 26 319 8.28e-87 264
MS.gene030103.t1 MTR_2g029740 45.819 299 155 4 42 334 33 330 1.61e-86 265
MS.gene030103.t1 MTR_7g026990 44.643 336 168 6 1 334 3 322 5.81e-86 262
MS.gene030103.t1 MTR_2g084110 44.408 304 159 4 34 334 21 317 8.94e-86 261
MS.gene030103.t1 MTR_2g029820 44.884 303 160 4 38 334 29 330 2.78e-85 261
MS.gene030103.t1 MTR_4g030890 44.300 307 163 5 32 334 94 396 3.55e-85 263
MS.gene030103.t1 MTR_2g029910 44.918 305 158 6 38 334 30 332 7.72e-85 260
MS.gene030103.t1 MTR_2g084090 43.092 304 164 4 34 334 21 318 1.09e-84 258
MS.gene030103.t1 MTR_2g029830 44.554 303 161 4 38 334 28 329 1.10e-84 259
MS.gene030103.t1 MTR_2g028980 44.966 298 159 3 42 334 33 330 2.13e-84 259
MS.gene030103.t1 MTR_5g074760 45.277 307 156 6 34 334 21 321 3.51e-84 257
MS.gene030103.t1 MTR_4g031140 42.951 305 166 5 34 334 24 324 3.91e-84 258
MS.gene030103.t1 MTR_4g074990 45.364 302 140 5 38 334 24 305 6.03e-84 256
MS.gene030103.t1 MTR_5g074710 45.277 307 156 6 34 334 21 321 1.12e-83 256
MS.gene030103.t1 MTR_3g467600 45.307 309 158 5 32 334 21 324 1.86e-83 256
MS.gene030103.t1 MTR_5g074740 45.277 307 156 6 34 334 21 321 4.84e-83 254
MS.gene030103.t1 MTR_1g115900 44.444 306 160 4 33 334 22 321 9.94e-82 251
MS.gene030103.t1 MTR_2g029850 44.224 303 162 4 38 334 29 330 1.37e-81 252
MS.gene030103.t1 MTR_3g072190 51.383 253 117 2 82 334 5 251 2.60e-79 242
MS.gene030103.t1 MTR_1g101830 44.186 301 159 7 38 334 27 322 1.06e-77 241
MS.gene030103.t1 MTR_1g077000 44.816 299 153 7 38 334 39 327 4.42e-77 239
MS.gene030103.t1 MTR_2g008710 45.741 317 148 11 28 334 23 325 5.70e-76 236
MS.gene030103.t1 MTR_4g074980 44.667 300 133 7 38 334 25 294 7.91e-76 235
MS.gene030103.t1 MTR_3g092990 42.295 305 168 5 36 334 24 326 9.95e-76 236
MS.gene030103.t1 MTR_4g074980 50.644 233 106 4 38 265 25 253 1.02e-75 233
MS.gene030103.t1 MTR_5g022870 41.967 305 166 7 34 334 19 316 1.44e-75 235
MS.gene030103.t1 MTR_1g038680 44.884 303 154 8 42 334 33 332 2.52e-75 235
MS.gene030103.t1 MTR_1g025980 41.441 333 168 9 6 333 7 317 8.19e-75 233
MS.gene030103.t1 MTR_7g107520 43.934 305 160 7 35 334 22 320 1.06e-73 230
MS.gene030103.t1 MTR_0155s0040 39.867 301 169 6 36 334 25 315 5.12e-73 228
MS.gene030103.t1 MTR_8g075100 40.328 305 171 6 34 334 22 319 2.46e-72 227
MS.gene030103.t1 MTR_2g088770 41.234 308 170 8 34 334 22 325 5.36e-72 226
MS.gene030103.t1 MTR_4g133800 41.528 301 154 9 43 334 46 333 2.24e-71 225
MS.gene030103.t1 MTR_2g029830 45.136 257 136 3 82 334 6 261 1.54e-70 221
MS.gene030103.t1 MTR_7g086820 39.661 295 170 5 42 334 24 312 2.61e-70 221
MS.gene030103.t1 MTR_6g027440 38.922 334 182 6 3 334 1 314 3.31e-70 221
MS.gene030103.t1 MTR_4g046713 40.065 307 175 6 34 334 23 326 1.55e-69 220
MS.gene030103.t1 MTR_1g086320 40.120 334 179 7 9 334 13 333 3.36e-69 219
MS.gene030103.t1 MTR_7g086870 39.799 299 169 6 38 334 22 311 8.14e-69 218
MS.gene030103.t1 MTR_4g114210 40.118 339 174 8 5 334 2 320 7.34e-68 215
MS.gene030103.t1 MTR_1g086490 38.710 341 181 7 9 334 13 340 1.28e-67 216
MS.gene030103.t1 MTR_8g062780 40.391 307 176 5 34 334 19 324 1.78e-67 215
MS.gene030103.t1 MTR_3g092990 40.264 303 166 5 36 334 24 315 1.67e-66 212
MS.gene030103.t1 MTR_5g074860 40.728 302 128 6 38 333 29 285 2.03e-66 211
MS.gene030103.t1 MTR_1g009750 40.453 309 171 9 35 334 24 328 3.93e-65 209
MS.gene030103.t1 MTR_4g087965 39.403 335 188 9 8 332 15 344 1.85e-64 207
MS.gene030103.t1 MTR_2g437770 39.159 309 173 8 31 334 43 341 7.27e-64 206
MS.gene030103.t1 MTR_1g090760 39.344 305 175 7 38 334 28 330 1.02e-63 205
MS.gene030103.t1 MTR_0286s0010 40.000 305 175 5 36 334 32 334 7.62e-63 203
MS.gene030103.t1 MTR_6g008075 40.000 305 175 5 36 334 32 334 7.62e-63 203
MS.gene030103.t1 MTR_2g008160 39.286 308 172 8 36 334 22 323 2.52e-62 201
MS.gene030103.t1 MTR_7g029030 38.333 300 178 5 38 334 25 320 1.28e-61 199
MS.gene030103.t1 MTR_4g095450 37.377 305 182 5 34 333 23 323 1.51e-61 199
MS.gene030103.t1 MTR_6g043460 39.057 297 169 7 38 330 36 324 6.26e-61 198
MS.gene030103.t1 MTR_2g008730 40.176 341 150 12 3 334 6 301 1.51e-60 196
MS.gene030103.t1 MTR_6g043280 37.667 300 176 7 38 334 41 332 4.20e-60 196
MS.gene030103.t1 MTR_6g043240 38.206 301 171 9 38 334 42 331 5.88e-60 196
MS.gene030103.t1 MTR_3g105790 39.274 303 173 4 38 334 25 322 4.32e-59 193
MS.gene030103.t1 MTR_4g132490 33.828 337 208 4 1 334 3 327 1.48e-58 192
MS.gene030103.t1 MTR_4g127670 37.542 301 175 6 38 330 24 319 3.59e-57 188
MS.gene030103.t1 MTR_5g016010 34.091 308 193 6 34 333 23 328 7.65e-57 187
MS.gene030103.t1 MTR_2g067440 36.970 330 171 8 35 330 57 383 1.31e-56 188
MS.gene030103.t1 MTR_2g078610 36.446 332 173 8 35 330 73 402 4.18e-53 180
MS.gene030103.t1 MTR_1g009750 36.808 307 168 10 35 334 24 311 1.02e-52 176
MS.gene030103.t1 MTR_2g077990 36.747 332 172 9 35 330 73 402 1.90e-52 178
MS.gene030103.t1 MTR_2g099175 33.819 343 206 7 1 334 5 335 2.65e-52 176
MS.gene030103.t1 MTR_2g008160 37.785 307 143 11 36 334 22 288 1.55e-51 172
MS.gene030103.t1 MTR_7g072490 43.162 234 73 4 82 315 2 175 4.51e-51 169
MS.gene030103.t1 MTR_5g033470 34.727 311 183 9 38 334 73 377 4.44e-50 171
MS.gene030103.t1 MTR_2g078280 36.957 322 165 9 35 320 73 392 6.14e-50 171
MS.gene030103.t1 MTR_1g066380 33.553 304 192 5 36 334 25 323 2.59e-49 167
MS.gene030103.t1 MTR_1g066640 32.895 304 194 5 36 334 25 323 1.81e-48 166
MS.gene030103.t1 MTR_1g066710 32.237 304 196 5 36 334 25 323 6.02e-48 164
MS.gene030103.t1 MTR_0147s0010 33.968 315 173 6 38 330 77 378 2.51e-47 164
MS.gene030103.t1 MTR_1g066680 33.553 304 191 7 36 334 25 322 7.27e-47 161
MS.gene030103.t1 MTR_3g072210 44.974 189 98 2 147 334 55 238 9.76e-44 150
MS.gene030103.t1 MTR_3g105790 38.983 236 139 2 103 334 12 246 1.32e-42 148
MS.gene030103.t1 MTR_2g008160 44.767 172 89 4 36 205 22 189 2.53e-42 146
MS.gene030103.t1 MTR_2g067450 34.653 303 187 8 35 330 8 306 3.27e-42 149
MS.gene030103.t1 MTR_5g074700 36.681 229 123 6 109 334 5 214 8.77e-42 145
MS.gene030103.t1 MTR_1g066380 32.941 255 163 4 83 334 6 255 3.21e-40 142
MS.gene030103.t1 MTR_3g072260 58.621 116 46 1 31 144 19 134 1.23e-39 137
MS.gene030103.t1 MTR_4g132110 30.132 302 201 5 38 334 32 328 1.42e-39 142
MS.gene030103.t1 MTR_4g132110 29.642 307 201 6 38 334 32 333 1.54e-37 137
MS.gene030103.t1 MTR_2g029880 37.696 191 104 5 148 334 9 188 1.07e-33 124
MS.gene030103.t1 MTR_1g089005 43.056 144 69 3 35 170 12 150 1.70e-27 105
MS.gene030103.t1 MTR_7g086790 37.879 198 96 7 74 269 11 183 1.60e-26 104
MS.gene030103.t1 MTR_4g031040 32.558 172 74 3 96 267 2 131 2.90e-24 96.7
MS.gene030103.t1 MTR_3g462850 38.356 146 74 5 200 334 9 149 1.51e-23 95.1
MS.gene030103.t1 MTR_5g058120 32.500 160 98 3 171 330 6 155 1.97e-20 89.4
MS.gene030103.t1 MTR_3g107060 29.044 272 120 10 69 323 105 320 2.26e-18 84.7
MS.gene030103.t1 MTR_4g114220 37.500 144 60 6 49 182 18 141 1.38e-17 78.6
MS.gene030103.t1 MTR_6g048160 57.746 71 24 3 77 145 22 88 2.14e-17 76.6
MS.gene030103.t1 MTR_4g073410 28.676 272 122 10 69 322 32 249 3.28e-17 80.9
MS.gene030103.t1 MTR_7g086810 37.069 116 49 2 38 153 6 97 3.74e-17 79.7
MS.gene030103.t1 MTR_4g061140 30.233 215 106 8 110 319 39 214 6.12e-15 73.2
MS.gene030103.t1 MTR_7g086785 47.297 74 38 1 80 153 2 74 6.90e-15 71.2
MS.gene030103.t1 MTR_4g061140 30.233 215 106 8 110 319 73 248 9.69e-15 73.2
MS.gene030103.t1 MTR_4g061140 30.047 213 105 8 110 317 73 246 1.69e-14 72.4
MS.gene030103.t1 MTR_5g074770 39.773 88 51 2 247 333 22 108 4.00e-14 68.2
MS.gene030103.t1 MTR_2g029930 42.169 83 32 2 55 121 22 104 8.87e-14 67.0
MS.gene030103.t1 MTR_1g098320 39.506 81 48 1 254 334 45 124 1.68e-13 67.4
MS.gene030103.t1 MTR_4g012865 44.444 72 38 1 38 107 77 148 1.26e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene030103.t1 AT4G16270 61.129 319 106 5 30 334 34 348 6.95e-135 387
MS.gene030103.t1 AT2G35380 52.412 311 139 3 33 334 25 335 1.65e-105 312
MS.gene030103.t1 AT5G66390 46.450 338 172 4 1 334 1 333 1.66e-102 305
MS.gene030103.t1 AT1G44970 47.965 344 164 5 4 334 5 346 2.83e-101 302
MS.gene030103.t1 AT2G18150 46.687 332 166 4 11 334 8 336 2.17e-100 299
MS.gene030103.t1 AT4G36430 47.078 308 159 2 31 334 23 330 1.67e-99 297
MS.gene030103.t1 AT5G05340 51.007 298 134 5 38 330 30 320 5.52e-99 295
MS.gene030103.t1 AT2G18140 45.619 331 170 4 11 334 8 335 5.63e-98 293
MS.gene030103.t1 AT5G06720 48.675 302 150 3 38 334 32 333 2.88e-97 291
MS.gene030103.t1 AT3G50990 45.401 337 180 2 2 334 5 341 1.42e-96 290
MS.gene030103.t1 AT1G49570 46.064 343 171 6 1 330 5 346 5.19e-95 286
MS.gene030103.t1 AT5G06730 46.689 302 156 3 38 334 33 334 4.27e-93 281
MS.gene030103.t1 AT2G38390 47.742 310 154 5 32 334 25 333 6.45e-93 281
MS.gene030103.t1 AT5G58400 50.993 302 137 5 38 334 30 325 9.03e-93 280
MS.gene030103.t1 AT1G68850 47.249 309 150 7 37 334 29 335 6.19e-92 278
MS.gene030103.t1 AT5G19890 48.355 304 144 6 38 334 30 327 1.49e-90 274
MS.gene030103.t1 AT5G58390 46.269 335 155 6 5 334 2 316 1.08e-88 269
MS.gene030103.t1 AT4G08780 44.079 304 163 4 38 334 24 327 7.51e-87 265
MS.gene030103.t1 AT4G08770 45.066 304 160 4 38 334 24 327 1.18e-86 265
MS.gene030103.t1 AT2G22420 44.918 305 160 5 34 334 19 319 1.43e-86 264
MS.gene030103.t1 AT1G14550 47.333 300 151 4 38 334 26 321 1.29e-85 261
MS.gene030103.t1 AT2G38380 45.806 310 160 5 32 334 25 333 3.99e-85 261
MS.gene030103.t1 AT3G32980 45.066 304 160 4 38 334 31 334 8.74e-85 260
MS.gene030103.t1 AT3G49120 44.481 308 164 4 34 334 28 335 6.15e-83 255
MS.gene030103.t1 AT3G49110 44.737 304 161 4 38 334 33 336 6.15e-82 253
MS.gene030103.t1 AT1G14540 45.819 299 156 3 38 334 21 315 2.51e-81 250
MS.gene030103.t1 AT5G51890 45.364 302 155 7 38 334 26 322 5.05e-80 247
MS.gene030103.t1 AT2G35380 50.407 246 115 2 96 334 2 247 3.00e-78 239
MS.gene030103.t1 AT1G71695 41.194 335 183 8 1 330 10 335 4.12e-76 238
MS.gene030103.t1 AT5G19880 43.791 306 162 6 38 334 25 329 8.54e-76 236
MS.gene030103.t1 AT5G64120 41.420 338 182 9 3 334 1 328 1.29e-74 233
MS.gene030103.t1 AT1G05260 41.391 302 170 5 38 334 26 325 7.03e-71 223
MS.gene030103.t1 AT4G33420 42.809 299 159 7 38 334 37 325 1.92e-70 222
MS.gene030103.t1 AT4G17690 42.053 302 165 6 38 334 26 322 3.08e-70 222
MS.gene030103.t1 AT5G17820 41.860 301 160 7 38 334 24 313 3.30e-70 221
MS.gene030103.t1 AT4G11290 40.059 337 179 8 5 334 6 326 4.12e-70 221
MS.gene030103.t1 AT5G47000 39.881 336 178 8 5 334 13 330 4.68e-70 221
MS.gene030103.t1 AT2G41480 43.046 302 155 9 43 334 34 328 5.43e-70 221
MS.gene030103.t1 AT3G21770 40.333 300 172 5 38 332 29 326 7.32e-70 221
MS.gene030103.t1 AT4G33420 42.809 299 159 7 38 334 84 372 7.89e-70 222
MS.gene030103.t1 AT5G17820 41.860 301 160 7 38 334 77 366 9.51e-69 219
MS.gene030103.t1 AT1G24110 39.799 299 172 6 38 330 22 318 6.28e-68 216
MS.gene030103.t1 AT5G39580 41.071 336 177 9 3 334 1 319 6.77e-68 216
MS.gene030103.t1 AT5G15180 37.748 302 179 6 38 334 32 329 4.46e-67 214
MS.gene030103.t1 AT2G24800 41.447 304 166 5 38 334 31 329 5.90e-67 213
MS.gene030103.t1 AT5G40150 39.934 303 174 5 36 334 30 328 7.76e-67 213
MS.gene030103.t1 AT1G30870 41.667 300 159 8 38 330 51 341 1.38e-66 213
MS.gene030103.t1 AT3G28200 38.944 303 176 5 36 334 19 316 1.40e-66 212
MS.gene030103.t1 AT3G03670 39.073 302 176 5 38 334 23 321 1.58e-66 212
MS.gene030103.t1 AT5G42180 40.864 301 166 8 38 333 23 316 1.75e-66 212
MS.gene030103.t1 AT3G01190 39.073 302 173 7 38 334 26 321 1.67e-65 209
MS.gene030103.t1 AT5G64110 43.234 303 156 10 40 334 36 330 1.41e-63 205
MS.gene030103.t1 AT4G26010 40.066 302 162 9 38 334 22 309 1.57e-63 204
MS.gene030103.t1 AT4G33870 36.446 332 170 6 38 330 68 397 1.88e-63 207
MS.gene030103.t1 AT4G37520 38.487 304 179 5 38 334 27 329 2.37e-63 204
MS.gene030103.t1 AT1G05240 39.672 305 171 8 38 334 26 325 2.48e-63 204
MS.gene030103.t1 AT1G05250 39.672 305 171 8 38 334 26 325 2.48e-63 204
MS.gene030103.t1 AT4G26010 40.066 302 162 9 38 334 50 337 2.77e-63 204
MS.gene030103.t1 AT4G31760 39.274 303 173 4 38 334 29 326 9.80e-63 202
MS.gene030103.t1 AT1G77100 41.472 299 162 7 42 334 28 319 1.16e-62 202
MS.gene030103.t1 AT3G49960 37.463 339 186 9 5 334 8 329 4.17e-62 201
MS.gene030103.t1 AT4G37520 37.829 304 178 6 38 334 27 326 7.20e-61 197
MS.gene030103.t1 AT2G18980 37.377 305 177 6 38 334 25 323 8.21e-61 197
MS.gene030103.t1 AT5G67400 36.688 308 187 5 34 334 23 329 1.79e-60 197
MS.gene030103.t1 AT4G25980 38.436 307 173 9 38 334 26 326 4.14e-60 196
MS.gene030103.t1 AT5G14130 38.312 308 180 7 33 334 27 330 4.15e-60 196
MS.gene030103.t1 AT4G37530 38.111 307 176 8 38 334 27 329 4.65e-60 196
MS.gene030103.t1 AT5G14130 38.312 308 180 7 33 334 68 371 1.74e-59 196
MS.gene030103.t1 AT1G34510 35.811 296 175 7 42 334 26 309 5.71e-59 192
MS.gene030103.t1 AT2G39040 39.482 309 171 9 38 334 46 350 4.00e-58 191
MS.gene030103.t1 AT4G30170 38.111 307 172 9 38 334 27 325 8.13e-58 190
MS.gene030103.t1 AT2G34060 38.235 306 177 8 38 333 42 345 1.02e-57 190
MS.gene030103.t1 AT5G64100 39.799 299 164 10 43 334 42 331 2.15e-53 178
MS.gene030103.t1 AT5G24070 35.942 345 185 12 8 334 9 335 9.44e-53 177
MS.gene030103.t1 AT3G17070 36.093 302 180 8 38 330 38 335 1.22e-50 171
MS.gene030103.t1 AT2G43480 35.570 298 176 6 46 334 45 335 1.49e-50 171
MS.gene030103.t1 AT4G37530 38.976 254 142 7 38 281 27 277 4.05e-50 169
MS.gene030103.t1 AT5G22410 38.591 298 166 11 43 331 33 322 3.31e-48 165
MS.gene030103.t1 AT4G21960 31.940 335 208 7 5 334 8 327 1.41e-47 163
MS.gene030103.t1 AT2G37130 32.215 298 191 6 43 334 4 296 3.68e-44 153
MS.gene030103.t1 AT2G37130 32.013 303 195 6 38 334 30 327 4.32e-44 154
MS.gene030103.t1 AT5G39580 42.857 210 102 6 3 210 1 194 8.92e-42 145
MS.gene030103.t1 AT3G17070 34.066 273 168 8 66 330 4 272 8.61e-40 141
MS.gene030103.t1 AT4G25980 42.262 168 91 4 38 203 71 234 4.80e-38 137
MS.gene030103.t1 AT2G24800 43.243 185 97 3 38 218 31 211 7.47e-37 133
MS.gene030103.t1 AT3G42570 40.206 97 57 1 108 203 53 149 1.16e-16 76.3
MS.gene030103.t1 AT4G35970 27.863 262 144 9 60 317 21 241 5.67e-15 74.3
MS.gene030103.t1 AT4G35970 28.509 228 119 8 60 283 21 208 4.06e-12 65.5

Find 83 sgRNAs with CRISPR-Local

Find 125 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGAATTCAATGGTGAAAA+TGG 0.130261 8.3:-6187630 MS.gene030103:CDS
TACTATATCAATCTTCTATC+TGG 0.202571 8.3:-6187758 MS.gene030103:CDS
AATGGTGAAAATGGGAAGTT+TGG 0.228237 8.3:-6187621 MS.gene030103:CDS
AAGATTATGGCCTCTGCTTC+AGG 0.235474 8.3:+6189185 None:intergenic
TGCTCGAGATTCGGTTCTTC+TGG 0.259894 8.3:-6188347 MS.gene030103:intron
AGCAATGAAGCAGCCATTCT+AGG 0.318959 8.3:+6189131 None:intergenic
CATTCCCATTCACCAAAGTT+TGG 0.328407 8.3:+6187714 None:intergenic
ACAGATACTGGTAGTCCATT+AGG 0.332515 8.3:-6189233 MS.gene030103:CDS
AAATTATTTAATTAATAATT+CGG 0.356322 8.3:+6187558 None:intergenic
CCAAACGTGAATTCACTTAG+AGG 0.356931 8.3:-6188454 MS.gene030103:CDS
TTCCACCCAAGAGAAGATTA+TGG 0.369466 8.3:+6189172 None:intergenic
CAAGACATGGTTGCCCTCTC+AGG 0.394192 8.3:-6188072 MS.gene030103:intron
AGCATATCAACAGTTGAGTT+TGG 0.395459 8.3:+6188129 None:intergenic
CTGCTTCAGGGCAACTGTAT+TGG 0.405133 8.3:+6189198 None:intergenic
CCTCTAAGTGAATTCACGTT+TGG 0.409135 8.3:+6188454 None:intergenic
ACCAACTTGGGAGGTGCAAA+TGG 0.415053 8.3:-6188208 MS.gene030103:CDS
TCAACAGTTGAGTTTGGTCC+TGG 0.417889 8.3:+6188135 None:intergenic
GTTAGTGATATTATTGTGTT+TGG 0.418593 8.3:-6189315 MS.gene030103:CDS
TTGTGATGCTTCAGTCTTGT+TGG 0.421974 8.3:-6188515 MS.gene030103:CDS
CAGAGGCCATAATCTTCTCT+TGG 0.427153 8.3:-6189178 MS.gene030103:CDS
CAGATACTGGTAGTCCATTA+GGG 0.437211 8.3:-6189232 MS.gene030103:CDS
TCATTGCAACGGTTGTGCTC+AGG 0.439819 8.3:-6187845 MS.gene030103:CDS
ATGGTGAAAATGGGAAGTTT+GGG 0.441266 8.3:-6187620 MS.gene030103:CDS
TGGTATATGTCAGTCCCTAA+TGG 0.443724 8.3:+6189218 None:intergenic
CCAGGTCAAGATGGGCAATT+CGG 0.447120 8.3:+6187807 None:intergenic
AGCAACTGCTGCTCGAGATT+CGG 0.448468 8.3:-6188356 MS.gene030103:CDS
AGTATAACGGCTAGCAAGGC+AGG 0.450218 8.3:-6188174 MS.gene030103:CDS
CCCATTTGCACCTCCCAAGT+TGG 0.453674 8.3:+6188207 None:intergenic
AAGAATTCAATGGTGAAAAT+GGG 0.454353 8.3:-6187629 MS.gene030103:CDS
TGATGACTTCAAGAATTCAA+TGG 0.456785 8.3:-6187639 MS.gene030103:CDS
GCTTCCATCGGACCAAACTT+TGG 0.457900 8.3:-6187726 MS.gene030103:CDS
ACTATATCAATCTTCTATCT+GGG 0.460341 8.3:-6187757 MS.gene030103:CDS
CGGACCAAACTTTGGTGAAT+GGG 0.467364 8.3:-6187718 MS.gene030103:CDS
ACAAATTCAGCATTAACATA+TGG 0.473008 8.3:+6187872 None:intergenic
GATGACAAAGAAAACTTTGT+TGG 0.474012 8.3:-6188493 MS.gene030103:CDS
TTCACCAAAGTTTGGTCCGA+TGG 0.479920 8.3:+6187722 None:intergenic
TCGGACCAAACTTTGGTGAA+TGG 0.479954 8.3:-6187719 MS.gene030103:CDS
AGAGGCCATAATCTTCTCTT+GGG 0.489133 8.3:-6189177 MS.gene030103:CDS
TATAGTCAGGAGGACCAACT+TGG 0.489919 8.3:-6188221 MS.gene030103:intron
GGAGCAAATAACAACATTCC+AGG 0.495310 8.3:-6188153 MS.gene030103:CDS
GCAATGAAGCAGCCATTCTA+GGG 0.502594 8.3:+6189132 None:intergenic
GATCAGCTACACAGAGTATC+GGG 0.508580 8.3:-6187598 MS.gene030103:CDS
CATTGCAACGGTTGTGCTCA+GGG 0.517627 8.3:-6187844 MS.gene030103:CDS
AGAGCTAAATGTTGAGCAGC+GGG 0.524550 8.3:+6187925 None:intergenic
TATTGATTATCAAATGTTGC+TGG 0.529809 8.3:+6187779 None:intergenic
TGTCTCTAGTGACCCTAGAA+TGG 0.532355 8.3:-6189144 MS.gene030103:CDS
CAACCATGTCTTGAAGTGTA+AGG 0.533245 8.3:+6188082 None:intergenic
TATGGTGGTGATACAGATAC+TGG 0.534878 8.3:-6189245 MS.gene030103:CDS
AGATAGTATAACGGCTAGCA+AGG 0.534920 8.3:-6188178 MS.gene030103:CDS
TCAGCACAAGAAACAGTTTG+TGG 0.535325 8.3:+6188385 None:intergenic
AGATTATGGCCTCTGCTTCA+GGG 0.536832 8.3:+6189186 None:intergenic
CAAAGAGGATTAACCTGAGA+GGG 0.536895 8.3:+6188059 None:intergenic
CTGGTGTGACCAGGTCAAGA+TGG 0.537775 8.3:+6187798 None:intergenic
AAGTCATCAAAGAAAACAAA+CGG 0.538400 8.3:+6187653 None:intergenic
GGATCAGCTACACAGAGTAT+CGG 0.540372 8.3:-6187599 MS.gene030103:CDS
GAATGGCTGCTTCATTGCTA+AGG 0.544913 8.3:-6189127 MS.gene030103:CDS
CCAACTTGGGAGGTGCAAAT+GGG 0.547215 8.3:-6188207 MS.gene030103:CDS
ATCAATCTTCTATCTGGGGA+AGG 0.561435 8.3:-6187752 MS.gene030103:CDS
AATTTGTATCATCATTGCAA+CGG 0.563399 8.3:-6187856 MS.gene030103:CDS
GGCCATAATCTTCTCTTGGG+TGG 0.566067 8.3:-6189174 MS.gene030103:CDS
GGGAAGAAAAGATAGTATAA+CGG 0.572694 8.3:-6188187 MS.gene030103:CDS
CGAAGTAACAGCGTCTCAGA+TGG 0.575941 8.3:-6187896 MS.gene030103:CDS
AACAAACGGATTTGCCACAT+AGG 0.576451 8.3:+6187667 None:intergenic
CCGAATTGCCCATCTTGACC+TGG 0.579994 8.3:-6187807 MS.gene030103:CDS
CAAATGTTGCTGGTGTGACC+AGG 0.589108 8.3:+6187789 None:intergenic
AGTATCTGTATCACCACCAT+AGG 0.590314 8.3:+6189247 None:intergenic
TGGGGAAGGATTGCTTCCAT+CGG 0.597989 8.3:-6187738 MS.gene030103:CDS
CCAAAGAGGATTAACCTGAG+AGG 0.605737 8.3:+6188058 None:intergenic
ATACAGTTGCCCTGAAGCAG+AGG 0.608869 8.3:-6189195 MS.gene030103:CDS
ACCATAGGCATCATTCACTC+TGG 0.612421 8.3:+6189262 None:intergenic
CTATATCAATCTTCTATCTG+GGG 0.624013 8.3:-6187756 MS.gene030103:CDS
CTCAACTGTTGATATGCTTG+TGG 0.624335 8.3:-6188124 MS.gene030103:CDS
AGGCCTTACACTTCAAGACA+TGG 0.628848 8.3:-6188085 MS.gene030103:CDS
TGGTGTGACCAGGTCAAGAT+GGG 0.634615 8.3:+6187799 None:intergenic
GCCAGAGTGAATGATGCCTA+TGG 0.638749 8.3:-6189263 MS.gene030103:CDS
ATAGTCAGGAGGACCAACTT+GGG 0.642005 8.3:-6188220 MS.gene030103:intron
ACAGATTGTCGAAACCTATG+TGG 0.645585 8.3:-6187681 MS.gene030103:CDS
GAGAGCTAAATGTTGAGCAG+CGG 0.646471 8.3:+6187924 None:intergenic
GTCAGGAGGACCAACTTGGG+AGG 0.660262 8.3:-6188217 MS.gene030103:CDS
AGTTTGCTATTATAGTCAGG+AGG 0.668889 8.3:-6188231 MS.gene030103:intron
TGGCTGCAAATGCTGAAGTG+AGG 0.694810 8.3:+6189282 None:intergenic
GTGGCCAAGTTTGAAAACGT+AGG 0.712646 8.3:-6188105 MS.gene030103:CDS
AGAGTGAATGATGCCTATGG+TGG 0.718785 8.3:-6189260 MS.gene030103:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTAAAATAAAAATAAAAA+GGG + chr8.3:6188035-6188054 None:intergenic 0.0%
!! GAAAATAAAATAAAATAAGA+AGG + chr8.3:6188597-6188616 None:intergenic 10.0%
!!! AGAAAAACTTTTTATTTTTT+TGG + chr8.3:6188313-6188332 None:intergenic 10.0%
!!! TATATATATTTTATAAAACC+GGG + chr8.3:6188169-6188188 None:intergenic 10.0%
!! ATAAAAAAGACAATATATGA+AGG + chr8.3:6187832-6187851 None:intergenic 15.0%
!!! CATATATTGTCTTTTTTATT+TGG - chr8.3:6187833-6187852 MS.gene030103:CDS 15.0%
!!! CTACAAAAAAATTCTAATTT+TGG - chr8.3:6187970-6187989 MS.gene030103:intron 15.0%
!!! GTTCATATTTTATATAAAGA+CGG + chr8.3:6188214-6188233 None:intergenic 15.0%
!!! AAAGCATCTATTTGTATAAA+AGG + chr8.3:6188132-6188151 None:intergenic 20.0%
! AAATTGTCAGTATGTTAACA+TGG + chr8.3:6188871-6188890 None:intergenic 25.0%
! AAGAATTCAATGGTGAAAAT+GGG - chr8.3:6189262-6189281 MS.gene030103:CDS 25.0%
! AAGTCATCAAAGAAAACAAA+CGG + chr8.3:6189241-6189260 None:intergenic 25.0%
! AATTTGTATCATCATTGCAA+CGG - chr8.3:6189035-6189054 MS.gene030103:intron 25.0%
! ACAAATTCAGCATTAACATA+TGG + chr8.3:6189022-6189041 None:intergenic 25.0%
! ACTATATCAATCTTCTATCT+GGG - chr8.3:6189134-6189153 MS.gene030103:CDS 25.0%
! CATCTATTTGTATAAAAGGT+AGG + chr8.3:6188128-6188147 None:intergenic 25.0%
! GTTAGTGATATTATTGTGTT+TGG - chr8.3:6187576-6187595 MS.gene030103:CDS 25.0%
! TACTATATCAATCTTCTATC+TGG - chr8.3:6189133-6189152 MS.gene030103:CDS 25.0%
!! AACAAAAGTTTGACTTTGAA+AGG + chr8.3:6187945-6187964 None:intergenic 25.0%
!! ATGAAATGTGTGTTATGTTT+TGG - chr8.3:6188342-6188361 MS.gene030103:intron 25.0%
!! TATTGATTATCAAATGTTGC+TGG + chr8.3:6189115-6189134 None:intergenic 25.0%
!!! TATTTTTTTACCCTCTTTTC+AGG - chr8.3:6188923-6188942 MS.gene030103:intron 25.0%
CAAGAATTCAATGGTGAAAA+TGG - chr8.3:6189261-6189280 MS.gene030103:CDS 30.0%
CTATATCAATCTTCTATCTG+GGG - chr8.3:6189135-6189154 MS.gene030103:CDS 30.0%
GATGACAAAGAAAACTTTGT+TGG - chr8.3:6188398-6188417 MS.gene030103:CDS 30.0%
GGGAAGAAAAGATAGTATAA+CGG - chr8.3:6188704-6188723 MS.gene030103:intron 30.0%
TGATGACTTCAAGAATTCAA+TGG - chr8.3:6189252-6189271 MS.gene030103:CDS 30.0%
!! ACTAGTTTGCTATTATAGTC+AGG - chr8.3:6188657-6188676 MS.gene030103:intron 30.0%
!!! GTTATGTTTTGGCTTTTACA+GGG - chr8.3:6188353-6188372 MS.gene030103:CDS 30.0%
!!! TGTTATGTTTTGGCTTTTAC+AGG - chr8.3:6188352-6188371 MS.gene030103:CDS 30.0%
AAATGTTAACATGTGCCCTA+AGG - chr8.3:6187857-6187876 MS.gene030103:CDS 35.0%
AATGGTGAAAATGGGAAGTT+TGG - chr8.3:6189270-6189289 MS.gene030103:CDS 35.0%
AATGTTAACATGTGCCCTAA+GGG - chr8.3:6187858-6187877 MS.gene030103:CDS 35.0%
AGCATATCAACAGTTGAGTT+TGG + chr8.3:6188765-6188784 None:intergenic 35.0%
ATGGTGAAAATGGGAAGTTT+GGG - chr8.3:6189271-6189290 MS.gene030103:CDS 35.0%
GGACATAACAATTTCCAAAG+AGG + chr8.3:6188850-6188869 None:intergenic 35.0%
TAAGAAGGATCGTAATCCAA+AGG + chr8.3:6188582-6188601 None:intergenic 35.0%
! TTATAAAACCGGGTGTTGTA+GGG + chr8.3:6188159-6188178 None:intergenic 35.0%
! TTTATAAAACCGGGTGTTGT+AGG + chr8.3:6188160-6188179 None:intergenic 35.0%
! TTTGTTATCTTGTGCCCTTA+GGG + chr8.3:6188011-6188030 None:intergenic 35.0%
!! AGTTTGCTATTATAGTCAGG+AGG - chr8.3:6188660-6188679 MS.gene030103:intron 35.0%
!! TTTTGTTATCTTGTGCCCTT+AGG + chr8.3:6188012-6188031 None:intergenic 35.0%
!!! TTTTCAGGTGCACATACAAT+AGG - chr8.3:6188938-6188957 MS.gene030103:intron 35.0%
ACAGATACTGGTAGTCCATT+AGG - chr8.3:6187658-6187677 MS.gene030103:CDS 40.0%
ACAGATTGTCGAAACCTATG+TGG - chr8.3:6189210-6189229 MS.gene030103:CDS 40.0%
AGAGGCCATAATCTTCTCTT+GGG - chr8.3:6187714-6187733 MS.gene030103:CDS 40.0%
AGATAGTATAACGGCTAGCA+AGG - chr8.3:6188713-6188732 MS.gene030103:intron 40.0%
AGTATCTGTATCACCACCAT+AGG + chr8.3:6187647-6187666 None:intergenic 40.0%
ATCAATCTTCTATCTGGGGA+AGG - chr8.3:6189139-6189158 MS.gene030103:CDS 40.0%
ATTCCCTAACATATGCCCTT+AGG + chr8.3:6187876-6187895 None:intergenic 40.0%
CAAAGAGGATTAACCTGAGA+GGG + chr8.3:6188835-6188854 None:intergenic 40.0%
CAACCATGTCTTGAAGTGTA+AGG + chr8.3:6188812-6188831 None:intergenic 40.0%
CAGATACTGGTAGTCCATTA+GGG - chr8.3:6187659-6187678 MS.gene030103:CDS 40.0%
CATTCCCATTCACCAAAGTT+TGG + chr8.3:6189180-6189199 None:intergenic 40.0%
CCAAACGTGAATTCACTTAG+AGG - chr8.3:6188437-6188456 MS.gene030103:CDS 40.0%
CCTCTAAGTGAATTCACGTT+TGG + chr8.3:6188440-6188459 None:intergenic 40.0%
CTCAACTGTTGATATGCTTG+TGG - chr8.3:6188767-6188786 MS.gene030103:intron 40.0%
GGAGCAAATAACAACATTCC+AGG - chr8.3:6188738-6188757 MS.gene030103:intron 40.0%
TCAGCACAAGAAACAGTTTG+TGG + chr8.3:6188509-6188528 None:intergenic 40.0%
TGGTATATGTCAGTCCCTAA+TGG + chr8.3:6187676-6187695 None:intergenic 40.0%
TGTATGTGCACCTGAAAAGA+GGG + chr8.3:6188936-6188955 None:intergenic 40.0%
TTCCACCCAAGAGAAGATTA+TGG + chr8.3:6187722-6187741 None:intergenic 40.0%
TTCCCTAACATATGCCCTTA+GGG + chr8.3:6187875-6187894 None:intergenic 40.0%
TTGTATGTGCACCTGAAAAG+AGG + chr8.3:6188937-6188956 None:intergenic 40.0%
! AACAAACGGATTTGCCACAT+AGG + chr8.3:6189227-6189246 None:intergenic 40.0%
! AAGGCCTACGTTTTCAAACT+TGG + chr8.3:6188793-6188812 None:intergenic 40.0%
! TATGGTGGTGATACAGATAC+TGG - chr8.3:6187646-6187665 MS.gene030103:CDS 40.0%
! TTGTGATGCTTCAGTCTTGT+TGG - chr8.3:6188376-6188395 MS.gene030103:CDS 40.0%
!! ATTCCTTAACTTGTGCCCTA+AGG - chr8.3:6187993-6188012 MS.gene030103:intron 40.0%
!! TTCCTTAACTTGTGCCCTAA+GGG - chr8.3:6187994-6188013 MS.gene030103:intron 40.0%
AAGATTATGGCCTCTGCTTC+AGG + chr8.3:6187709-6187728 None:intergenic 45.0%
ACCATAGGCATCATTCACTC+TGG + chr8.3:6187632-6187651 None:intergenic 45.0%
AGAGCTAAATGTTGAGCAGC+GGG + chr8.3:6188969-6188988 None:intergenic 45.0%
AGAGTGAATGATGCCTATGG+TGG - chr8.3:6187631-6187650 MS.gene030103:CDS 45.0%
AGATTATGGCCTCTGCTTCA+GGG + chr8.3:6187708-6187727 None:intergenic 45.0%
AGCAATGAAGCAGCCATTCT+AGG + chr8.3:6187763-6187782 None:intergenic 45.0%
AGGCCTTACACTTCAAGACA+TGG - chr8.3:6188806-6188825 MS.gene030103:intron 45.0%
ATAGTCAGGAGGACCAACTT+GGG - chr8.3:6188671-6188690 MS.gene030103:intron 45.0%
CAGAGGCCATAATCTTCTCT+TGG - chr8.3:6187713-6187732 MS.gene030103:CDS 45.0%
CCAAAGAGGATTAACCTGAG+AGG + chr8.3:6188836-6188855 None:intergenic 45.0%
CCTCTCAGGTTAATCCTCTT+TGG - chr8.3:6188833-6188852 MS.gene030103:intron 45.0%
CGGACCAAACTTTGGTGAAT+GGG - chr8.3:6189173-6189192 MS.gene030103:CDS 45.0%
GAATGGCTGCTTCATTGCTA+AGG - chr8.3:6187764-6187783 MS.gene030103:CDS 45.0%
GAGAGCTAAATGTTGAGCAG+CGG + chr8.3:6188970-6188989 None:intergenic 45.0%
GCAATGAAGCAGCCATTCTA+GGG + chr8.3:6187762-6187781 None:intergenic 45.0%
GGATCAGCTACACAGAGTAT+CGG - chr8.3:6189292-6189311 MS.gene030103:CDS 45.0%
GTGGCCAAGTTTGAAAACGT+AGG - chr8.3:6188786-6188805 MS.gene030103:intron 45.0%
TATAGTCAGGAGGACCAACT+TGG - chr8.3:6188670-6188689 MS.gene030103:intron 45.0%
TCAACAGTTGAGTTTGGTCC+TGG + chr8.3:6188759-6188778 None:intergenic 45.0%
TCGGACCAAACTTTGGTGAA+TGG - chr8.3:6189172-6189191 MS.gene030103:CDS 45.0%
TGTCTCTAGTGACCCTAGAA+TGG - chr8.3:6187747-6187766 MS.gene030103:CDS 45.0%
TTCACCAAAGTTTGGTCCGA+TGG + chr8.3:6189172-6189191 None:intergenic 45.0%
! CTGGTTTGTCATTGCTCCTT+TGG - chr8.3:6188563-6188582 MS.gene030103:intron 45.0%
! CTTTTAGTCCCTACAACACC+CGG - chr8.3:6188148-6188167 MS.gene030103:CDS 45.0%
! GATCAGCTACACAGAGTATC+GGG - chr8.3:6189293-6189312 MS.gene030103:CDS 45.0%
! TGCCCTAAGGGCATATGTTA+GGG - chr8.3:6187870-6187889 MS.gene030103:CDS 45.0%
!!! ATATATATATTTTATAAAAC+CGG + chr8.3:6188170-6188189 None:intergenic 5.0%
!!! CATTTAAAATAAAAATAAAA+AGG + chr8.3:6188036-6188055 None:intergenic 5.0%
!!! CTTTTTATTTTTATTTTAAA+TGG - chr8.3:6188034-6188053 MS.gene030103:intron 5.0%
!!! TTAAATGATTTTTTTTAATA+TGG - chr8.3:6188268-6188287 MS.gene030103:intron 5.0%
AGCAACTGCTGCTCGAGATT+CGG - chr8.3:6188535-6188554 MS.gene030103:intron 50.0%
AGTATAACGGCTAGCAAGGC+AGG - chr8.3:6188717-6188736 MS.gene030103:intron 50.0%
ATACAGTTGCCCTGAAGCAG+AGG - chr8.3:6187696-6187715 MS.gene030103:CDS 50.0%
CAAATGTTGCTGGTGTGACC+AGG + chr8.3:6189105-6189124 None:intergenic 50.0%
CATTGCAACGGTTGTGCTCA+GGG - chr8.3:6189047-6189066 MS.gene030103:intron 50.0%
CCAGGTCAAGATGGGCAATT+CGG + chr8.3:6189087-6189106 None:intergenic 50.0%
CGAAGTAACAGCGTCTCAGA+TGG - chr8.3:6188995-6189014 MS.gene030103:intron 50.0%
CTGCTTCAGGGCAACTGTAT+TGG + chr8.3:6187696-6187715 None:intergenic 50.0%
GCCAGAGTGAATGATGCCTA+TGG - chr8.3:6187628-6187647 MS.gene030103:CDS 50.0%
GCTTCCATCGGACCAAACTT+TGG - chr8.3:6189165-6189184 MS.gene030103:CDS 50.0%
GGCCATAATCTTCTCTTGGG+TGG - chr8.3:6187717-6187736 MS.gene030103:CDS 50.0%
TCATTGCAACGGTTGTGCTC+AGG - chr8.3:6189046-6189065 MS.gene030103:intron 50.0%
TGCCCTTAGGGCACAAGTTA+AGG + chr8.3:6187999-6188018 None:intergenic 50.0%
TGGCTGCAAATGCTGAAGTG+AGG + chr8.3:6187612-6187631 None:intergenic 50.0%
TGGGGAAGGATTGCTTCCAT+CGG - chr8.3:6189153-6189172 MS.gene030103:CDS 50.0%
TGGTGTGACCAGGTCAAGAT+GGG + chr8.3:6189095-6189114 None:intergenic 50.0%
! ACCAACTTGGGAGGTGCAAA+TGG - chr8.3:6188683-6188702 MS.gene030103:intron 50.0%
! CCAACTTGGGAGGTGCAAAT+GGG - chr8.3:6188684-6188703 MS.gene030103:intron 50.0%
! GTGCCCTAAGGGCATATGTT+AGG - chr8.3:6187869-6187888 MS.gene030103:CDS 50.0%
! TGCTCGAGATTCGGTTCTTC+TGG - chr8.3:6188544-6188563 MS.gene030103:intron 50.0%
CAAGACATGGTTGCCCTCTC+AGG - chr8.3:6188819-6188838 MS.gene030103:intron 55.0%
CCCATTTGCACCTCCCAAGT+TGG + chr8.3:6188687-6188706 None:intergenic 55.0%
CCGAATTGCCCATCTTGACC+TGG - chr8.3:6189084-6189103 MS.gene030103:intron 55.0%
CTGGTGTGACCAGGTCAAGA+TGG + chr8.3:6189096-6189115 None:intergenic 55.0%
GTCAGGAGGACCAACTTGGG+AGG - chr8.3:6188674-6188693 MS.gene030103:intron 60.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 6187565 6189348 6187565 ID=MS.gene030103
chr8.3 mRNA 6187565 6189348 6187565 ID=MS.gene030103.t1;Parent=MS.gene030103
chr8.3 exon 6189106 6189348 6189106 ID=MS.gene030103.t1.exon1;Parent=MS.gene030103.t1
chr8.3 CDS 6189106 6189348 6189106 ID=cds.MS.gene030103.t1;Parent=MS.gene030103.t1
chr8.3 exon 6188348 6188539 6188348 ID=MS.gene030103.t1.exon2;Parent=MS.gene030103.t1
chr8.3 CDS 6188348 6188539 6188348 ID=cds.MS.gene030103.t1;Parent=MS.gene030103.t1
chr8.3 exon 6188073 6188238 6188073 ID=MS.gene030103.t1.exon3;Parent=MS.gene030103.t1
chr8.3 CDS 6188073 6188238 6188073 ID=cds.MS.gene030103.t1;Parent=MS.gene030103.t1
chr8.3 exon 6187565 6187968 6187565 ID=MS.gene030103.t1.exon4;Parent=MS.gene030103.t1
chr8.3 CDS 6187565 6187968 6187565 ID=cds.MS.gene030103.t1;Parent=MS.gene030103.t1
Gene Sequence

>MS.gene030103

ATGACTATGAAGTTAGTGATATTATTGTGTTTGGTGATACTCAACCTCACTTCAGCATTTGCAGCCAGAGTGAATGATGCCTATGGTGGTGATACAGATACTGGTAGTCCATTAGGGACTGACATATACCAATACAGTTGCCCTGAAGCAGAGGCCATAATCTTCTCTTGGGTGGAACAAGCTGTCTCTAGTGACCCTAGAATGGCTGCTTCATTGCTAAGGCTACATTTTCATGATTGCTTTGTCAATGCAAGCATTTCTATGCCTTCATATATTGTCTTTTTTATTTGGCAAATGTTAACATGTGCCCTAAGGGCATATGTTAGGGAATTTAAAATAGAAATAACTGTCTTAATTGTGCATTCAACTTTATTCAACCTTTCAAAGTCAAACTTTTGTTCTTTTCTACAAAAAAATTCTAATTTTGGATTCCTTAACTTGTGCCCTAAGGGCACAAGATAACAAAACCCTTTTTATTTTTATTTTAAATGGTCTAAACAAATTTTTATTACGTATAAATCACAAATCTCTTAAATTTAATTTCTATAGAATGTTTAGCTCCTACCTTTTATACAAATAGATGCTTTTAGTCCCTACAACACCCGGTTTTATAAAATATATATATATATATATGAACTAAAAGCATCCGTCTTTATATAAAATATGAACTAAAAAGTATAAATTGATACAAACTAAAATTAAATTAAATGATTTTTTTTAATATGGAGTAAAGAAATATTTAAATCCAAAAAAATAAAAAGTTTTTCTACAAATTTCATGAAATGTGTGTTATGTTTTGGCTTTTACAGGGTTGTGATGCTTCAGTCTTGTTGGATGACAAAGAAAACTTTGTTGGTGAGAAAACAGCTGCTCCAAACGTGAATTCACTTAGAGGATTTGATGTAATCAATGAAATAAAATCTGAACTAGAAGTAGTTTGTCCACAAACTGTTTCTTGTGCTGACATACTAGCAACTGCTGCTCGAGATTCGGTTCTTCTGGTTTGTCATTGCTCCTTTGGATTACGATCCTTCTTATTTTATTTTATTTTCTCAATTAGTAGTATTCTAATTAAAATGAAGCATATGATGAACTAGTTTGCTATTATAGTCAGGAGGACCAACTTGGGAGGTGCAAATGGGAAGAAAAGATAGTATAACGGCTAGCAAGGCAGGAGCAAATAACAACATTCCAGGACCAAACTCAACTGTTGATATGCTTGTGGCCAAGTTTGAAAACGTAGGCCTTACACTTCAAGACATGGTTGCCCTCTCAGGTTAATCCTCTTTGGAAATTGTTATGTCCATGTTAACATACTGACAATTTTATTGAAAATCAAGATTAGTGTTTGCTTATTTTATTTTTTTACCCTCTTTTCAGGTGCACATACAATAGGAAAAGCCCGCTGCTCAACATTTAGCTCTCGCTTACGAAGTAACAGCGTCTCAGATGGTCCATATGTTAATGCTGAATTTGTATCATCATTGCAACGGTTGTGCTCAGGGCAAGATAATAGCAACCGAATTGCCCATCTTGACCTGGTCACACCAGCAACATTTGATAATCAATACTATATCAATCTTCTATCTGGGGAAGGATTGCTTCCATCGGACCAAACTTTGGTGAATGGGAATGATCAGACACGACAGATTGTCGAAACCTATGTGGCAAATCCGTTTGTTTTCTTTGATGACTTCAAGAATTCAATGGTGAAAATGGGAAGTTTGGGATCAGCTACACAGAGTATCGGGCAGATTCGCAGAGACTGCCGAATTATTAATTAA
Protein sequence

>MS.gene030103.t1

MTMKLVILLCLVILNLTSAFAARVNDAYGGDTDTGSPLGTDIYQYSCPEAEAIIFSWVEQAVSSDPRMAASLLRLHFHDCFGCDASVLLDDKENFVGEKTAAPNVNSLRGFDVINEIKSELEVVCPQTVSCADILATAARDSVLLSGGPTWEVQMGRKDSITASKAGANNNIPGPNSTVDMLVAKFENVGLTLQDMVALSGAHTIGKARCSTFSSRLRSNSVSDGPYVNAEFVSSLQRLCSGQDNSNRIAHLDLVTPATFDNQYYINLLSGEGLLPSDQTLVNGNDQTRQIVETYVANPFVFFDDFKNSMVKMGSLGSATQSIGQIRRDCRIIN