Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059685.t1 | XP_003611449.1 | 94 | 332 | 20 | 0 | 1 | 332 | 1 | 332 | 1.10E-180 | 642.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059685.t1 | Q9SLH7 | 66.9 | 308 | 102 | 0 | 24 | 331 | 28 | 335 | 1.4e-120 | 434.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059685.t1 | G7JZV3 | 94.0 | 332 | 20 | 0 | 1 | 332 | 1 | 332 | 7.8e-181 | 642.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050082 | MS.gene059685 | 0.809443 | 1.89E-50 | -1.69E-46 |
MS.gene056856 | MS.gene059685 | 0.800644 | 1.31E-48 | -1.69E-46 |
MS.gene059685 | MS.gene061777 | 0.809068 | 2.27E-50 | -1.69E-46 |
MS.gene059685 | MS.gene073116 | 0.801831 | 7.48E-49 | -1.69E-46 |
MS.gene059685 | MS.gene08721 | 0.803979 | 2.69E-49 | -1.69E-46 |
MS.gene059685 | MS.gene09669 | 0.846709 | 1.83E-59 | -1.69E-46 |
MS.gene059685 | MS.gene21483 | 0.827246 | 1.74E-54 | -1.69E-46 |
MS.gene059685 | MS.gene27942 | 0.823832 | 1.12E-53 | -1.69E-46 |
MS.gene059685 | MS.gene27943 | 0.809025 | 2.32E-50 | -1.69E-46 |
MS.gene059685 | MS.gene27964 | 0.81857 | 1.83E-52 | -1.69E-46 |
MS.gene059685 | MS.gene33599 | 0.827027 | 1.96E-54 | -1.69E-46 |
MS.gene059685 | MS.gene35340 | 0.810834 | 9.46E-51 | -1.69E-46 |
MS.gene059685 | MS.gene35589 | 0.804275 | 2.34E-49 | -1.69E-46 |
MS.gene059685 | MS.gene36005 | 0.804359 | 2.24E-49 | -1.69E-46 |
MS.gene059685 | MS.gene39959 | 0.837358 | 5.45E-57 | -1.69E-46 |
MS.gene059685 | MS.gene47901 | 0.822647 | 2.12E-53 | -1.69E-46 |
MS.gene059685 | MS.gene47902 | 0.811753 | 5.98E-51 | -1.69E-46 |
MS.gene059685 | MS.gene47926 | 0.832768 | 7.83E-56 | -1.69E-46 |
MS.gene059685 | MS.gene50534 | 0.83713 | 6.23E-57 | -1.69E-46 |
MS.gene059685 | MS.gene53494 | 0.832337 | 1.00E-55 | -1.69E-46 |
MS.gene059685 | MS.gene57291 | 0.809448 | 1.88E-50 | -1.69E-46 |
MS.gene059685 | MS.gene58425 | 0.839437 | 1.59E-57 | -1.69E-46 |
MS.gene059685 | MS.gene64069 | 0.816733 | 4.75E-52 | -1.69E-46 |
MS.gene059685 | MS.gene64791 | 0.802116 | 6.54E-49 | -1.69E-46 |
MS.gene059685 | MS.gene67184 | 0.833523 | 5.08E-56 | -1.69E-46 |
MS.gene059685 | MS.gene67221 | 0.81378 | 2.15E-51 | -1.69E-46 |
MS.gene059685 | MS.gene67222 | 0.807314 | 5.37E-50 | -1.69E-46 |
MS.gene059685 | MS.gene72503 | 0.800059 | 1.72E-48 | -1.69E-46 |
MS.gene059685 | MS.gene74358 | 0.813342 | 2.69E-51 | -1.69E-46 |
MS.gene059685 | MS.gene75261 | 0.823076 | 1.68E-53 | -1.69E-46 |
MS.gene059685 | MS.gene77774 | 0.807584 | 4.71E-50 | -1.69E-46 |
MS.gene059685 | MS.gene78768 | 0.812591 | 3.93E-51 | -1.69E-46 |
MS.gene059685 | MS.gene91317 | 0.815865 | 7.43E-52 | -1.69E-46 |
MS.gene059685 | MS.gene93196 | 0.816813 | 4.56E-52 | -1.69E-46 |
MS.gene059685 | MS.gene94630 | 0.805897 | 1.07E-49 | -1.69E-46 |
MS.gene059685 | MS.gene96701 | 0.831784 | 1.37E-55 | -1.69E-46 |
MS.gene059685 | MS.gene98021 | 0.817616 | 3.01E-52 | -1.69E-46 |
MS.gene059685 | MS.gene98315 | 0.81456 | 1.45E-51 | -1.69E-46 |
MS.gene059685 | MS.gene99553 | 0.818798 | 1.62E-52 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene061253 | MS.gene059685 | PPI |
MS.gene047885 | MS.gene059685 | PPI |
MS.gene059685 | MS.gene068824 | PPI |
MS.gene26846 | MS.gene059685 | PPI |
MS.gene02412 | MS.gene059685 | PPI |
MS.gene059685 | MS.gene59415 | PPI |
MS.gene074595 | MS.gene059685 | PPI |
MS.gene059685 | MS.gene89609 | PPI |
MS.gene030103 | MS.gene059685 | PPI |
MS.gene64708 | MS.gene059685 | PPI |
MS.gene053958 | MS.gene059685 | PPI |
MS.gene059685 | MS.gene047884 | PPI |
MS.gene012047 | MS.gene059685 | PPI |
MS.gene059685 | MS.gene78768 | PPI |
MS.gene76444 | MS.gene059685 | PPI |
MS.gene068826 | MS.gene059685 | PPI |
MS.gene012048 | MS.gene059685 | PPI |
MS.gene010565 | MS.gene059685 | PPI |
MS.gene068822 | MS.gene059685 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059685.t1 | MTR_5g014100 | 93.976 | 332 | 20 | 0 | 1 | 332 | 1 | 332 | 0.0 | 630 |
MS.gene059685.t1 | MTR_8g076820 | 54.248 | 306 | 135 | 2 | 26 | 331 | 30 | 330 | 4.55e-113 | 331 |
MS.gene059685.t1 | MTR_5g021060 | 53.074 | 309 | 138 | 3 | 24 | 331 | 28 | 330 | 6.29e-112 | 328 |
MS.gene059685.t1 | MTR_1g022970 | 51.634 | 306 | 144 | 2 | 26 | 331 | 46 | 347 | 2.12e-100 | 300 |
MS.gene059685.t1 | MTR_4g122640 | 49.346 | 306 | 148 | 2 | 26 | 331 | 38 | 336 | 5.50e-100 | 298 |
MS.gene059685.t1 | MTR_5g083860 | 49.541 | 327 | 150 | 4 | 7 | 331 | 12 | 325 | 5.72e-99 | 295 |
MS.gene059685.t1 | MTR_7g072510 | 46.341 | 328 | 155 | 4 | 4 | 331 | 6 | 312 | 4.15e-98 | 292 |
MS.gene059685.t1 | MTR_3g094650 | 47.840 | 324 | 149 | 5 | 7 | 328 | 14 | 319 | 8.59e-98 | 292 |
MS.gene059685.t1 | MTR_3g466200 | 47.734 | 331 | 151 | 7 | 4 | 331 | 9 | 320 | 1.42e-97 | 291 |
MS.gene059685.t1 | MTR_3g072190 | 47.432 | 331 | 161 | 3 | 1 | 331 | 1 | 318 | 1.36e-96 | 289 |
MS.gene059685.t1 | MTR_4g029170 | 48.160 | 326 | 154 | 4 | 8 | 331 | 9 | 321 | 3.01e-96 | 288 |
MS.gene059685.t1 | MTR_2g084080 | 47.975 | 321 | 152 | 4 | 13 | 331 | 10 | 317 | 4.56e-96 | 287 |
MS.gene059685.t1 | MTR_5g049280 | 47.910 | 311 | 151 | 4 | 26 | 331 | 33 | 337 | 4.56e-96 | 288 |
MS.gene059685.t1 | MTR_7g072480 | 48.758 | 322 | 150 | 4 | 10 | 331 | 10 | 316 | 8.85e-96 | 286 |
MS.gene059685.t1 | MTR_2g084110 | 47.692 | 325 | 154 | 6 | 9 | 331 | 7 | 317 | 3.77e-94 | 283 |
MS.gene059685.t1 | MTR_2g084020 | 46.726 | 336 | 156 | 7 | 1 | 331 | 1 | 318 | 7.55e-94 | 282 |
MS.gene059685.t1 | MTR_3g094670 | 48.012 | 327 | 150 | 5 | 7 | 331 | 14 | 322 | 1.49e-93 | 281 |
MS.gene059685.t1 | MTR_2g029560 | 47.386 | 306 | 157 | 2 | 26 | 331 | 24 | 325 | 2.91e-93 | 281 |
MS.gene059685.t1 | MTR_4g029190 | 47.812 | 320 | 156 | 3 | 12 | 331 | 32 | 340 | 5.14e-93 | 280 |
MS.gene059685.t1 | MTR_2g040000 | 50.000 | 306 | 142 | 5 | 30 | 331 | 33 | 331 | 7.10e-93 | 280 |
MS.gene059685.t1 | MTR_4g125940 | 47.883 | 307 | 154 | 3 | 26 | 331 | 28 | 329 | 9.64e-93 | 279 |
MS.gene059685.t1 | MTR_4g029180 | 48.852 | 305 | 141 | 5 | 29 | 331 | 30 | 321 | 1.25e-92 | 279 |
MS.gene059685.t1 | MTR_2g084010 | 45.619 | 331 | 167 | 4 | 1 | 331 | 1 | 318 | 2.24e-92 | 278 |
MS.gene059685.t1 | MTR_4g083710 | 46.224 | 331 | 163 | 5 | 4 | 331 | 6 | 324 | 5.69e-92 | 277 |
MS.gene059685.t1 | MTR_2g084090 | 46.319 | 326 | 158 | 6 | 9 | 331 | 7 | 318 | 2.04e-91 | 276 |
MS.gene059685.t1 | MTR_1g115900 | 46.626 | 326 | 156 | 6 | 8 | 331 | 12 | 321 | 2.80e-91 | 276 |
MS.gene059685.t1 | MTR_3g094630 | 47.619 | 336 | 157 | 7 | 1 | 331 | 1 | 322 | 1.35e-90 | 274 |
MS.gene059685.t1 | MTR_7g093370 | 46.580 | 307 | 159 | 3 | 26 | 331 | 69 | 371 | 1.56e-90 | 275 |
MS.gene059685.t1 | MTR_2g029800 | 47.351 | 302 | 155 | 2 | 30 | 331 | 33 | 330 | 7.06e-90 | 273 |
MS.gene059685.t1 | MTR_4g029200 | 47.231 | 307 | 147 | 4 | 26 | 331 | 46 | 338 | 8.48e-90 | 272 |
MS.gene059685.t1 | MTR_2g029730 | 47.386 | 306 | 157 | 2 | 26 | 331 | 25 | 326 | 1.68e-89 | 271 |
MS.gene059685.t1 | MTR_5g074860 | 45.238 | 336 | 161 | 8 | 2 | 330 | 5 | 324 | 2.21e-89 | 271 |
MS.gene059685.t1 | MTR_2g029850 | 46.732 | 306 | 159 | 2 | 26 | 331 | 29 | 330 | 4.42e-89 | 271 |
MS.gene059685.t1 | MTR_5g074970 | 48.710 | 310 | 142 | 5 | 26 | 331 | 30 | 326 | 4.47e-89 | 270 |
MS.gene059685.t1 | MTR_1g054205 | 45.875 | 303 | 159 | 3 | 30 | 331 | 28 | 326 | 6.18e-89 | 270 |
MS.gene059685.t1 | MTR_2g029815 | 44.411 | 331 | 180 | 2 | 1 | 331 | 4 | 330 | 7.52e-89 | 270 |
MS.gene059685.t1 | MTR_2g084000 | 44.713 | 331 | 168 | 5 | 4 | 331 | 1 | 319 | 4.85e-88 | 267 |
MS.gene059685.t1 | MTR_4g125940 | 49.640 | 278 | 134 | 3 | 55 | 331 | 2 | 274 | 2.04e-87 | 264 |
MS.gene059685.t1 | MTR_2g029820 | 46.689 | 302 | 157 | 2 | 30 | 331 | 33 | 330 | 5.78e-87 | 265 |
MS.gene059685.t1 | MTR_3g466180 | 47.256 | 328 | 156 | 4 | 5 | 331 | 12 | 323 | 1.78e-86 | 263 |
MS.gene059685.t1 | MTR_2g029830 | 45.928 | 307 | 160 | 4 | 26 | 331 | 28 | 329 | 2.88e-86 | 264 |
MS.gene059685.t1 | MTR_2g029860 | 46.026 | 302 | 159 | 2 | 30 | 331 | 33 | 330 | 4.13e-86 | 263 |
MS.gene059685.t1 | MTR_4g074995 | 44.512 | 328 | 160 | 4 | 4 | 331 | 3 | 308 | 5.51e-86 | 261 |
MS.gene059685.t1 | MTR_5g017850 | 44.479 | 326 | 172 | 5 | 7 | 331 | 9 | 326 | 1.14e-85 | 261 |
MS.gene059685.t1 | MTR_2g029750 | 45.338 | 311 | 156 | 3 | 26 | 331 | 29 | 330 | 2.63e-85 | 261 |
MS.gene059685.t1 | MTR_5g074760 | 45.122 | 328 | 164 | 7 | 7 | 331 | 7 | 321 | 3.01e-85 | 260 |
MS.gene059685.t1 | MTR_5g074710 | 45.289 | 329 | 162 | 8 | 7 | 331 | 7 | 321 | 7.75e-85 | 259 |
MS.gene059685.t1 | MTR_7g026990 | 44.923 | 325 | 164 | 5 | 7 | 331 | 13 | 322 | 8.63e-85 | 259 |
MS.gene059685.t1 | MTR_2g029910 | 45.395 | 304 | 161 | 3 | 29 | 331 | 33 | 332 | 6.02e-84 | 258 |
MS.gene059685.t1 | MTR_2g029740 | 45.277 | 307 | 154 | 4 | 30 | 331 | 33 | 330 | 1.08e-83 | 257 |
MS.gene059685.t1 | MTR_4g074990 | 42.727 | 330 | 158 | 4 | 5 | 331 | 4 | 305 | 1.08e-83 | 255 |
MS.gene059685.t1 | MTR_2g028980 | 43.114 | 334 | 183 | 3 | 1 | 331 | 1 | 330 | 2.08e-83 | 256 |
MS.gene059685.t1 | MTR_5g074740 | 44.512 | 328 | 166 | 7 | 7 | 331 | 7 | 321 | 5.38e-83 | 254 |
MS.gene059685.t1 | MTR_5g017860 | 44.172 | 326 | 173 | 5 | 7 | 331 | 9 | 326 | 1.36e-82 | 253 |
MS.gene059685.t1 | MTR_0155s0040 | 42.903 | 310 | 152 | 7 | 26 | 331 | 27 | 315 | 1.48e-81 | 250 |
MS.gene059685.t1 | MTR_4g030890 | 44.040 | 302 | 160 | 4 | 30 | 331 | 104 | 396 | 1.83e-80 | 251 |
MS.gene059685.t1 | MTR_4g031140 | 43.750 | 304 | 158 | 5 | 30 | 331 | 32 | 324 | 2.03e-79 | 246 |
MS.gene059685.t1 | MTR_3g072190 | 49.049 | 263 | 121 | 3 | 69 | 331 | 2 | 251 | 2.99e-79 | 242 |
MS.gene059685.t1 | MTR_3g467600 | 43.465 | 329 | 165 | 6 | 6 | 331 | 14 | 324 | 4.23e-79 | 244 |
MS.gene059685.t1 | MTR_1g086320 | 42.342 | 333 | 180 | 5 | 4 | 331 | 8 | 333 | 7.36e-79 | 244 |
MS.gene059685.t1 | MTR_1g086490 | 41.593 | 339 | 181 | 4 | 4 | 331 | 8 | 340 | 2.32e-78 | 243 |
MS.gene059685.t1 | MTR_4g046713 | 41.718 | 326 | 179 | 5 | 6 | 331 | 12 | 326 | 2.44e-76 | 237 |
MS.gene059685.t1 | MTR_1g077000 | 40.237 | 338 | 178 | 8 | 1 | 331 | 7 | 327 | 6.81e-76 | 236 |
MS.gene059685.t1 | MTR_5g022870 | 39.939 | 328 | 185 | 6 | 4 | 331 | 1 | 316 | 1.17e-75 | 235 |
MS.gene059685.t1 | MTR_4g074980 | 41.590 | 327 | 155 | 5 | 5 | 331 | 4 | 294 | 1.42e-75 | 234 |
MS.gene059685.t1 | MTR_1g101830 | 41.964 | 336 | 176 | 10 | 1 | 331 | 1 | 322 | 3.10e-75 | 234 |
MS.gene059685.t1 | MTR_4g074980 | 46.484 | 256 | 131 | 1 | 5 | 260 | 4 | 253 | 7.96e-75 | 231 |
MS.gene059685.t1 | MTR_2g088770 | 42.904 | 303 | 165 | 5 | 30 | 331 | 30 | 325 | 9.14e-75 | 233 |
MS.gene059685.t1 | MTR_3g092990 | 39.759 | 332 | 193 | 3 | 1 | 331 | 1 | 326 | 1.67e-73 | 230 |
MS.gene059685.t1 | MTR_8g075100 | 42.345 | 307 | 163 | 7 | 26 | 331 | 26 | 319 | 4.36e-73 | 229 |
MS.gene059685.t1 | MTR_7g107520 | 41.830 | 306 | 168 | 4 | 26 | 331 | 25 | 320 | 1.83e-72 | 227 |
MS.gene059685.t1 | MTR_4g133800 | 44.554 | 303 | 153 | 7 | 30 | 331 | 45 | 333 | 1.43e-71 | 225 |
MS.gene059685.t1 | MTR_2g029830 | 45.769 | 260 | 137 | 2 | 72 | 331 | 6 | 261 | 6.13e-71 | 222 |
MS.gene059685.t1 | MTR_4g114210 | 42.553 | 329 | 171 | 8 | 8 | 331 | 5 | 320 | 8.38e-71 | 223 |
MS.gene059685.t1 | MTR_7g086870 | 39.735 | 302 | 166 | 5 | 30 | 331 | 26 | 311 | 1.44e-70 | 222 |
MS.gene059685.t1 | MTR_2g437770 | 44.481 | 308 | 155 | 9 | 25 | 331 | 49 | 341 | 3.51e-69 | 219 |
MS.gene059685.t1 | MTR_6g027440 | 39.157 | 332 | 183 | 8 | 1 | 331 | 1 | 314 | 1.14e-68 | 218 |
MS.gene059685.t1 | MTR_4g132490 | 38.235 | 306 | 182 | 4 | 26 | 331 | 29 | 327 | 1.62e-68 | 217 |
MS.gene059685.t1 | MTR_1g038680 | 41.503 | 306 | 169 | 6 | 30 | 331 | 33 | 332 | 3.94e-68 | 216 |
MS.gene059685.t1 | MTR_7g086820 | 39.404 | 302 | 170 | 5 | 30 | 331 | 24 | 312 | 2.69e-67 | 214 |
MS.gene059685.t1 | MTR_2g008710 | 40.122 | 329 | 180 | 7 | 6 | 331 | 11 | 325 | 3.97e-67 | 214 |
MS.gene059685.t1 | MTR_2g099175 | 38.690 | 336 | 184 | 7 | 7 | 331 | 11 | 335 | 5.81e-67 | 214 |
MS.gene059685.t1 | MTR_1g025980 | 39.264 | 326 | 179 | 8 | 6 | 330 | 10 | 317 | 1.11e-66 | 212 |
MS.gene059685.t1 | MTR_5g074860 | 38.095 | 336 | 146 | 7 | 2 | 330 | 5 | 285 | 1.25e-66 | 211 |
MS.gene059685.t1 | MTR_7g029030 | 37.538 | 333 | 193 | 6 | 1 | 331 | 1 | 320 | 4.76e-66 | 211 |
MS.gene059685.t1 | MTR_4g087965 | 40.446 | 314 | 176 | 6 | 19 | 327 | 35 | 342 | 1.50e-65 | 210 |
MS.gene059685.t1 | MTR_1g090760 | 37.195 | 328 | 196 | 6 | 3 | 327 | 6 | 326 | 2.48e-65 | 209 |
MS.gene059685.t1 | MTR_3g105790 | 38.671 | 331 | 194 | 5 | 1 | 331 | 1 | 322 | 2.93e-64 | 206 |
MS.gene059685.t1 | MTR_8g062780 | 38.217 | 314 | 174 | 5 | 26 | 331 | 23 | 324 | 3.64e-64 | 206 |
MS.gene059685.t1 | MTR_1g066380 | 37.500 | 312 | 179 | 5 | 23 | 331 | 25 | 323 | 1.36e-63 | 204 |
MS.gene059685.t1 | MTR_6g043280 | 36.310 | 336 | 185 | 7 | 8 | 331 | 14 | 332 | 3.76e-63 | 204 |
MS.gene059685.t1 | MTR_6g043460 | 37.829 | 304 | 172 | 6 | 26 | 327 | 36 | 324 | 4.06e-63 | 204 |
MS.gene059685.t1 | MTR_0286s0010 | 36.474 | 329 | 194 | 7 | 7 | 331 | 17 | 334 | 6.86e-63 | 203 |
MS.gene059685.t1 | MTR_6g008075 | 36.474 | 329 | 194 | 7 | 7 | 331 | 17 | 334 | 6.86e-63 | 203 |
MS.gene059685.t1 | MTR_3g092990 | 37.651 | 332 | 189 | 4 | 1 | 331 | 1 | 315 | 4.40e-62 | 200 |
MS.gene059685.t1 | MTR_1g066710 | 36.275 | 306 | 180 | 4 | 29 | 331 | 30 | 323 | 1.93e-61 | 199 |
MS.gene059685.t1 | MTR_6g043240 | 36.688 | 308 | 175 | 6 | 26 | 331 | 42 | 331 | 3.13e-61 | 199 |
MS.gene059685.t1 | MTR_1g066640 | 36.275 | 306 | 180 | 5 | 29 | 331 | 30 | 323 | 1.29e-60 | 197 |
MS.gene059685.t1 | MTR_5g016010 | 35.714 | 336 | 202 | 6 | 1 | 330 | 1 | 328 | 2.88e-60 | 196 |
MS.gene059685.t1 | MTR_4g127670 | 39.016 | 305 | 174 | 6 | 26 | 327 | 24 | 319 | 8.16e-60 | 195 |
MS.gene059685.t1 | MTR_1g009750 | 37.195 | 328 | 190 | 8 | 8 | 331 | 13 | 328 | 1.62e-59 | 194 |
MS.gene059685.t1 | MTR_2g078610 | 36.070 | 341 | 177 | 9 | 20 | 327 | 70 | 402 | 7.65e-58 | 192 |
MS.gene059685.t1 | MTR_2g077990 | 36.364 | 341 | 176 | 9 | 20 | 327 | 70 | 402 | 1.87e-57 | 191 |
MS.gene059685.t1 | MTR_2g067440 | 35.588 | 340 | 179 | 9 | 19 | 327 | 53 | 383 | 2.11e-57 | 191 |
MS.gene059685.t1 | MTR_1g066680 | 35.621 | 306 | 181 | 6 | 29 | 331 | 30 | 322 | 4.21e-56 | 185 |
MS.gene059685.t1 | MTR_2g008160 | 39.344 | 305 | 173 | 7 | 30 | 331 | 28 | 323 | 2.42e-55 | 183 |
MS.gene059685.t1 | MTR_5g033470 | 39.172 | 314 | 174 | 10 | 26 | 331 | 73 | 377 | 1.40e-54 | 183 |
MS.gene059685.t1 | MTR_4g095450 | 37.255 | 306 | 176 | 7 | 26 | 327 | 27 | 320 | 4.79e-54 | 180 |
MS.gene059685.t1 | MTR_1g066380 | 36.981 | 265 | 152 | 4 | 70 | 331 | 3 | 255 | 2.46e-53 | 176 |
MS.gene059685.t1 | MTR_4g132110 | 35.484 | 310 | 183 | 6 | 26 | 331 | 32 | 328 | 2.47e-53 | 178 |
MS.gene059685.t1 | MTR_2g078280 | 35.952 | 331 | 171 | 9 | 20 | 317 | 70 | 392 | 1.23e-51 | 176 |
MS.gene059685.t1 | MTR_4g132110 | 35.556 | 315 | 181 | 8 | 26 | 331 | 32 | 333 | 2.29e-51 | 173 |
MS.gene059685.t1 | MTR_3g072210 | 47.449 | 196 | 90 | 4 | 137 | 331 | 55 | 238 | 1.36e-49 | 166 |
MS.gene059685.t1 | MTR_2g008730 | 33.731 | 335 | 184 | 7 | 1 | 331 | 1 | 301 | 7.95e-48 | 163 |
MS.gene059685.t1 | MTR_1g009750 | 34.049 | 326 | 186 | 9 | 8 | 331 | 13 | 311 | 1.71e-47 | 162 |
MS.gene059685.t1 | MTR_5g074700 | 40.833 | 240 | 113 | 7 | 95 | 331 | 1 | 214 | 2.00e-46 | 157 |
MS.gene059685.t1 | MTR_2g067450 | 34.185 | 313 | 196 | 5 | 20 | 330 | 5 | 309 | 2.45e-46 | 159 |
MS.gene059685.t1 | MTR_0147s0010 | 33.841 | 328 | 173 | 6 | 25 | 330 | 76 | 381 | 5.85e-45 | 157 |
MS.gene059685.t1 | MTR_2g008160 | 35.738 | 305 | 149 | 6 | 30 | 331 | 28 | 288 | 4.07e-44 | 153 |
MS.gene059685.t1 | MTR_7g072490 | 39.764 | 254 | 86 | 3 | 71 | 324 | 1 | 187 | 1.30e-43 | 149 |
MS.gene059685.t1 | MTR_3g105790 | 38.800 | 250 | 148 | 3 | 82 | 331 | 2 | 246 | 2.29e-43 | 150 |
MS.gene059685.t1 | MTR_2g029880 | 43.299 | 194 | 96 | 4 | 138 | 331 | 9 | 188 | 7.17e-40 | 139 |
MS.gene059685.t1 | MTR_2g008160 | 45.181 | 166 | 87 | 3 | 30 | 195 | 28 | 189 | 5.11e-38 | 134 |
MS.gene059685.t1 | MTR_3g072260 | 48.872 | 133 | 68 | 0 | 1 | 133 | 1 | 133 | 7.57e-34 | 122 |
MS.gene059685.t1 | MTR_3g462850 | 39.241 | 158 | 63 | 5 | 190 | 331 | 9 | 149 | 9.05e-26 | 100 |
MS.gene059685.t1 | MTR_7g086790 | 41.667 | 120 | 66 | 2 | 73 | 192 | 17 | 132 | 1.85e-23 | 96.3 |
MS.gene059685.t1 | MTR_1g089005 | 43.333 | 120 | 61 | 2 | 25 | 138 | 14 | 132 | 2.93e-22 | 91.7 |
MS.gene059685.t1 | MTR_2g077980 | 28.571 | 294 | 161 | 12 | 78 | 331 | 1 | 285 | 1.68e-21 | 92.8 |
MS.gene059685.t1 | MTR_6g048160 | 61.972 | 71 | 23 | 2 | 65 | 135 | 22 | 88 | 1.89e-20 | 84.7 |
MS.gene059685.t1 | MTR_4g114220 | 54.762 | 84 | 28 | 2 | 52 | 135 | 29 | 102 | 2.26e-20 | 86.3 |
MS.gene059685.t1 | MTR_7g086785 | 35.766 | 137 | 81 | 3 | 72 | 205 | 4 | 136 | 3.37e-18 | 80.1 |
MS.gene059685.t1 | MTR_1g098320 | 42.683 | 82 | 44 | 1 | 250 | 331 | 46 | 124 | 1.73e-17 | 78.2 |
MS.gene059685.t1 | MTR_4g031040 | 34.831 | 178 | 69 | 5 | 85 | 262 | 1 | 131 | 3.83e-16 | 74.3 |
MS.gene059685.t1 | MTR_5g058120 | 30.357 | 168 | 96 | 5 | 162 | 327 | 7 | 155 | 4.06e-16 | 77.4 |
MS.gene059685.t1 | MTR_4g012865 | 47.826 | 69 | 36 | 0 | 25 | 93 | 76 | 144 | 7.71e-16 | 73.9 |
MS.gene059685.t1 | MTR_2g029930 | 35.652 | 115 | 46 | 3 | 8 | 108 | 1 | 101 | 1.87e-14 | 68.9 |
MS.gene059685.t1 | MTR_3g107060 | 25.466 | 322 | 158 | 10 | 13 | 315 | 57 | 315 | 3.17e-14 | 72.8 |
MS.gene059685.t1 | MTR_7g107500 | 39.080 | 87 | 49 | 1 | 245 | 331 | 15 | 97 | 5.96e-13 | 64.3 |
MS.gene059685.t1 | MTR_7g086810 | 33.628 | 113 | 49 | 1 | 31 | 143 | 11 | 97 | 2.59e-12 | 66.2 |
MS.gene059685.t1 | MTR_5g074770 | 39.785 | 93 | 48 | 3 | 241 | 330 | 21 | 108 | 7.68e-11 | 58.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059685.t1 | AT2G35380 | 66.883 | 308 | 102 | 0 | 24 | 331 | 28 | 335 | 5.68e-155 | 438 |
MS.gene059685.t1 | AT2G35380 | 66.802 | 247 | 82 | 0 | 85 | 331 | 1 | 247 | 3.25e-121 | 349 |
MS.gene059685.t1 | AT5G66390 | 53.268 | 306 | 138 | 2 | 26 | 331 | 33 | 333 | 5.65e-111 | 326 |
MS.gene059685.t1 | AT3G50990 | 52.614 | 306 | 140 | 3 | 26 | 331 | 41 | 341 | 4.28e-109 | 322 |
MS.gene059685.t1 | AT2G18150 | 51.307 | 306 | 144 | 2 | 26 | 331 | 36 | 336 | 1.67e-106 | 315 |
MS.gene059685.t1 | AT1G44970 | 53.268 | 306 | 139 | 3 | 26 | 331 | 45 | 346 | 7.51e-106 | 313 |
MS.gene059685.t1 | AT4G36430 | 51.307 | 306 | 144 | 2 | 26 | 331 | 30 | 330 | 2.19e-104 | 309 |
MS.gene059685.t1 | AT4G16270 | 50.485 | 309 | 142 | 5 | 26 | 331 | 48 | 348 | 1.73e-100 | 300 |
MS.gene059685.t1 | AT2G18140 | 49.346 | 306 | 150 | 2 | 26 | 331 | 35 | 335 | 4.15e-100 | 298 |
MS.gene059685.t1 | AT5G06720 | 46.012 | 326 | 171 | 3 | 6 | 331 | 13 | 333 | 2.00e-97 | 291 |
MS.gene059685.t1 | AT1G68850 | 45.955 | 309 | 161 | 3 | 26 | 331 | 30 | 335 | 6.50e-94 | 283 |
MS.gene059685.t1 | AT5G58400 | 47.720 | 329 | 152 | 7 | 6 | 331 | 14 | 325 | 1.22e-92 | 279 |
MS.gene059685.t1 | AT5G58390 | 48.024 | 329 | 151 | 6 | 6 | 331 | 5 | 316 | 3.84e-92 | 277 |
MS.gene059685.t1 | AT5G06730 | 42.945 | 326 | 181 | 3 | 6 | 331 | 14 | 334 | 1.33e-91 | 278 |
MS.gene059685.t1 | AT5G19890 | 47.557 | 307 | 151 | 5 | 26 | 331 | 30 | 327 | 4.43e-91 | 275 |
MS.gene059685.t1 | AT3G32980 | 44.937 | 316 | 170 | 2 | 17 | 331 | 22 | 334 | 3.25e-90 | 274 |
MS.gene059685.t1 | AT5G05340 | 46.429 | 308 | 150 | 5 | 26 | 331 | 30 | 324 | 3.46e-89 | 270 |
MS.gene059685.t1 | AT2G38390 | 46.104 | 308 | 161 | 3 | 26 | 332 | 31 | 334 | 1.38e-88 | 270 |
MS.gene059685.t1 | AT1G14550 | 43.505 | 331 | 169 | 6 | 4 | 331 | 6 | 321 | 2.73e-88 | 268 |
MS.gene059685.t1 | AT3G49120 | 43.354 | 316 | 175 | 2 | 17 | 331 | 23 | 335 | 5.00e-87 | 266 |
MS.gene059685.t1 | AT1G49570 | 45.253 | 316 | 168 | 3 | 15 | 329 | 37 | 348 | 6.11e-87 | 265 |
MS.gene059685.t1 | AT3G49110 | 44.625 | 307 | 166 | 2 | 26 | 331 | 33 | 336 | 3.22e-86 | 264 |
MS.gene059685.t1 | AT2G38380 | 46.230 | 305 | 159 | 3 | 29 | 332 | 34 | 334 | 5.47e-86 | 263 |
MS.gene059685.t1 | AT4G08780 | 44.625 | 307 | 166 | 2 | 26 | 331 | 24 | 327 | 1.35e-85 | 262 |
MS.gene059685.t1 | AT1G14540 | 44.702 | 302 | 156 | 3 | 30 | 331 | 25 | 315 | 4.23e-85 | 259 |
MS.gene059685.t1 | AT2G22420 | 42.598 | 331 | 178 | 5 | 1 | 331 | 1 | 319 | 4.99e-85 | 259 |
MS.gene059685.t1 | AT4G08770 | 45.277 | 307 | 164 | 2 | 26 | 331 | 24 | 327 | 1.67e-84 | 259 |
MS.gene059685.t1 | AT3G03670 | 43.202 | 331 | 166 | 7 | 4 | 331 | 10 | 321 | 6.74e-78 | 241 |
MS.gene059685.t1 | AT5G19880 | 43.675 | 332 | 174 | 5 | 3 | 331 | 8 | 329 | 1.46e-77 | 241 |
MS.gene059685.t1 | AT5G51890 | 42.553 | 329 | 171 | 10 | 8 | 331 | 7 | 322 | 1.69e-75 | 235 |
MS.gene059685.t1 | AT1G05260 | 42.020 | 307 | 170 | 5 | 26 | 331 | 26 | 325 | 1.19e-73 | 231 |
MS.gene059685.t1 | AT2G41480 | 43.492 | 315 | 160 | 8 | 23 | 331 | 26 | 328 | 7.74e-73 | 228 |
MS.gene059685.t1 | AT3G21770 | 41.026 | 312 | 177 | 5 | 17 | 327 | 19 | 324 | 1.70e-72 | 228 |
MS.gene059685.t1 | AT5G64120 | 43.377 | 302 | 159 | 5 | 30 | 331 | 39 | 328 | 3.26e-72 | 227 |
MS.gene059685.t1 | AT4G33420 | 42.484 | 306 | 159 | 6 | 26 | 331 | 37 | 325 | 3.86e-72 | 226 |
MS.gene059685.t1 | AT5G17820 | 42.053 | 302 | 159 | 6 | 30 | 331 | 28 | 313 | 9.05e-72 | 225 |
MS.gene059685.t1 | AT4G33420 | 42.484 | 306 | 159 | 6 | 26 | 331 | 84 | 372 | 1.77e-71 | 226 |
MS.gene059685.t1 | AT1G05240 | 41.801 | 311 | 169 | 6 | 24 | 331 | 24 | 325 | 2.76e-71 | 224 |
MS.gene059685.t1 | AT1G05250 | 41.801 | 311 | 169 | 6 | 24 | 331 | 24 | 325 | 2.76e-71 | 224 |
MS.gene059685.t1 | AT1G71695 | 40.984 | 305 | 164 | 6 | 26 | 327 | 44 | 335 | 7.74e-71 | 224 |
MS.gene059685.t1 | AT5G17820 | 42.053 | 302 | 159 | 6 | 30 | 331 | 81 | 366 | 3.85e-70 | 223 |
MS.gene059685.t1 | AT4G11290 | 39.039 | 333 | 194 | 6 | 1 | 331 | 1 | 326 | 7.55e-70 | 221 |
MS.gene059685.t1 | AT5G15180 | 41.254 | 303 | 168 | 6 | 30 | 331 | 36 | 329 | 8.07e-70 | 221 |
MS.gene059685.t1 | AT2G39040 | 42.581 | 310 | 169 | 5 | 26 | 331 | 46 | 350 | 4.63e-69 | 219 |
MS.gene059685.t1 | AT5G42180 | 41.159 | 328 | 175 | 8 | 4 | 330 | 6 | 316 | 7.93e-68 | 215 |
MS.gene059685.t1 | AT5G64110 | 41.141 | 333 | 185 | 5 | 1 | 331 | 7 | 330 | 1.50e-67 | 215 |
MS.gene059685.t1 | AT4G26010 | 41.254 | 303 | 158 | 6 | 30 | 331 | 26 | 309 | 3.59e-67 | 213 |
MS.gene059685.t1 | AT5G47000 | 39.355 | 310 | 174 | 5 | 25 | 331 | 32 | 330 | 4.39e-67 | 214 |
MS.gene059685.t1 | AT4G26010 | 41.254 | 303 | 158 | 6 | 30 | 331 | 54 | 337 | 7.57e-67 | 213 |
MS.gene059685.t1 | AT4G31760 | 39.385 | 325 | 184 | 5 | 7 | 331 | 15 | 326 | 8.62e-67 | 213 |
MS.gene059685.t1 | AT3G28200 | 38.312 | 308 | 176 | 4 | 26 | 331 | 21 | 316 | 1.37e-66 | 212 |
MS.gene059685.t1 | AT1G24110 | 40.656 | 305 | 170 | 6 | 26 | 327 | 22 | 318 | 1.83e-66 | 212 |
MS.gene059685.t1 | AT5G39580 | 43.564 | 303 | 158 | 7 | 30 | 331 | 29 | 319 | 1.84e-66 | 212 |
MS.gene059685.t1 | AT5G40150 | 39.286 | 308 | 174 | 5 | 26 | 331 | 32 | 328 | 1.12e-65 | 210 |
MS.gene059685.t1 | AT4G37530 | 40.064 | 312 | 178 | 4 | 23 | 331 | 24 | 329 | 1.16e-64 | 207 |
MS.gene059685.t1 | AT3G01190 | 40.968 | 310 | 171 | 7 | 23 | 331 | 23 | 321 | 1.53e-64 | 207 |
MS.gene059685.t1 | AT4G17690 | 40.000 | 310 | 169 | 6 | 26 | 331 | 26 | 322 | 2.79e-64 | 206 |
MS.gene059685.t1 | AT1G34510 | 40.717 | 307 | 162 | 6 | 26 | 331 | 22 | 309 | 3.06e-64 | 206 |
MS.gene059685.t1 | AT4G37520 | 39.159 | 309 | 179 | 4 | 26 | 331 | 27 | 329 | 8.36e-64 | 205 |
MS.gene059685.t1 | AT2G34060 | 41.424 | 309 | 168 | 7 | 26 | 328 | 42 | 343 | 2.65e-63 | 204 |
MS.gene059685.t1 | AT2G18980 | 39.458 | 332 | 175 | 8 | 6 | 331 | 12 | 323 | 9.73e-63 | 202 |
MS.gene059685.t1 | AT2G24800 | 40.323 | 310 | 170 | 6 | 26 | 331 | 31 | 329 | 7.39e-62 | 200 |
MS.gene059685.t1 | AT4G37520 | 38.511 | 309 | 178 | 5 | 26 | 331 | 27 | 326 | 1.09e-60 | 197 |
MS.gene059685.t1 | AT1G77100 | 40.717 | 307 | 162 | 7 | 30 | 331 | 28 | 319 | 1.45e-60 | 197 |
MS.gene059685.t1 | AT4G25980 | 38.438 | 333 | 186 | 7 | 4 | 331 | 8 | 326 | 1.76e-60 | 197 |
MS.gene059685.t1 | AT2G43480 | 39.617 | 313 | 170 | 8 | 26 | 331 | 35 | 335 | 3.82e-60 | 196 |
MS.gene059685.t1 | AT4G33870 | 35.693 | 339 | 172 | 6 | 26 | 327 | 68 | 397 | 5.24e-60 | 197 |
MS.gene059685.t1 | AT2G37130 | 37.013 | 308 | 176 | 6 | 29 | 331 | 2 | 296 | 7.20e-60 | 194 |
MS.gene059685.t1 | AT2G37130 | 37.013 | 308 | 176 | 6 | 29 | 331 | 33 | 327 | 2.40e-59 | 194 |
MS.gene059685.t1 | AT4G30170 | 38.535 | 314 | 176 | 8 | 23 | 331 | 24 | 325 | 5.91e-59 | 192 |
MS.gene059685.t1 | AT5G14130 | 33.531 | 337 | 195 | 5 | 6 | 331 | 12 | 330 | 1.16e-58 | 192 |
MS.gene059685.t1 | AT3G49960 | 36.970 | 330 | 197 | 6 | 6 | 331 | 7 | 329 | 3.15e-58 | 191 |
MS.gene059685.t1 | AT5G24070 | 37.380 | 313 | 177 | 7 | 26 | 331 | 35 | 335 | 3.43e-58 | 191 |
MS.gene059685.t1 | AT5G14130 | 33.531 | 337 | 195 | 5 | 6 | 331 | 53 | 371 | 4.03e-58 | 192 |
MS.gene059685.t1 | AT5G64100 | 40.789 | 304 | 165 | 6 | 30 | 331 | 41 | 331 | 4.59e-58 | 191 |
MS.gene059685.t1 | AT4G21960 | 37.742 | 310 | 176 | 5 | 26 | 331 | 31 | 327 | 1.80e-57 | 189 |
MS.gene059685.t1 | AT5G67400 | 36.036 | 333 | 201 | 5 | 5 | 331 | 3 | 329 | 2.26e-56 | 186 |
MS.gene059685.t1 | AT1G30870 | 39.355 | 310 | 171 | 8 | 25 | 331 | 50 | 345 | 5.24e-56 | 186 |
MS.gene059685.t1 | AT3G17070 | 36.190 | 315 | 183 | 9 | 24 | 331 | 36 | 339 | 5.29e-55 | 183 |
MS.gene059685.t1 | AT4G37530 | 39.382 | 259 | 151 | 3 | 23 | 278 | 24 | 279 | 4.32e-51 | 171 |
MS.gene059685.t1 | AT5G22410 | 33.234 | 334 | 201 | 10 | 1 | 328 | 5 | 322 | 2.99e-49 | 167 |
MS.gene059685.t1 | AT5G39580 | 46.597 | 191 | 94 | 5 | 30 | 217 | 29 | 214 | 2.74e-42 | 147 |
MS.gene059685.t1 | AT3G17070 | 33.684 | 285 | 170 | 10 | 54 | 331 | 4 | 276 | 6.99e-40 | 142 |
MS.gene059685.t1 | AT4G25980 | 43.158 | 190 | 100 | 4 | 4 | 193 | 53 | 234 | 8.87e-40 | 142 |
MS.gene059685.t1 | AT2G24800 | 44.910 | 167 | 88 | 2 | 26 | 192 | 31 | 193 | 1.69e-36 | 132 |
MS.gene059685.t1 | AT3G42570 | 35.135 | 148 | 81 | 4 | 46 | 191 | 13 | 147 | 1.60e-15 | 73.2 |
MS.gene059685.t1 | AT4G32320 | 26.667 | 270 | 122 | 7 | 57 | 312 | 114 | 321 | 1.54e-12 | 67.8 |
Find 76 sgRNAs with CRISPR-Local
Find 119 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAAGCCTCTAAAGATGAATT+TGG | 0.209973 | 5.1:-6953146 | None:intergenic |
GGAAATATTAATGTTCTTAC+TGG | 0.240350 | 5.1:+6953948 | MS.gene059685:CDS |
TGCTCCAAATTCATCTTTAG+AGG | 0.250110 | 5.1:+6953142 | MS.gene059685:CDS |
AAGGATTAGGAGGCAGGTTT+GGG | 0.252670 | 5.1:+6953866 | MS.gene059685:CDS |
TTGTCATCCCTTCCGGTAAT+AGG | 0.256822 | 5.1:-6953723 | None:intergenic |
GAAGGATTAGGAGGCAGGTT+TGG | 0.274461 | 5.1:+6953865 | MS.gene059685:CDS |
TGTCCAATATTCACACTCTA+AGG | 0.278407 | 5.1:+6952215 | MS.gene059685:CDS |
CCACGTAAAGAGTTCAAATT+TGG | 0.287872 | 5.1:-6952645 | None:intergenic |
GTGCGATGCATCGGTACTTT+TGG | 0.290206 | 5.1:+6952584 | MS.gene059685:CDS |
ATTGAAGGAAAAGGCTTGTT+AGG | 0.300624 | 5.1:+6953807 | MS.gene059685:CDS |
GAAGACCTTGTGGTTCTATC+AGG | 0.316631 | 5.1:+6953203 | MS.gene059685:CDS |
ACCAAGATGGGATGTGTGGC+TGG | 0.353196 | 5.1:+6953067 | MS.gene059685:CDS |
TGCAAATTTGTCATCCCTTC+CGG | 0.355868 | 5.1:-6953730 | None:intergenic |
AATTTGGAGCAGGGATGAAT+AGG | 0.364651 | 5.1:-6953130 | None:intergenic |
GGGCAAGATGTTTAAGCTTC+CGG | 0.371613 | 5.1:+6953607 | MS.gene059685:CDS |
TATTGATTATCAAACCGTTT+TGG | 0.372482 | 5.1:-6953771 | None:intergenic |
TTGTAGATTTGTCAACCCTT+AGG | 0.373734 | 5.1:+6953995 | MS.gene059685:CDS |
ACACCTTAGAGTGTGAATAT+TGG | 0.388942 | 5.1:-6952218 | None:intergenic |
ATAAACATTATTGAAGGAAA+AGG | 0.389138 | 5.1:+6953798 | MS.gene059685:CDS |
AAGACTTTGATGGAAGGATT+AGG | 0.406088 | 5.1:+6953853 | MS.gene059685:CDS |
ATCTTGCCCTTCCTATTGTA+TGG | 0.411212 | 5.1:-6953593 | None:intergenic |
TGCCAAGTCTATGATTAAGA+TGG | 0.412611 | 5.1:+6953926 | MS.gene059685:CDS |
CCTTCCGGTAATAGGACATA+TGG | 0.429530 | 5.1:-6953715 | None:intergenic |
TTGATCAGTCAAGACTTTGA+TGG | 0.433237 | 5.1:+6953843 | MS.gene059685:CDS |
CGGTCCATATGTCCTATTAC+CGG | 0.433238 | 5.1:+6953711 | MS.gene059685:CDS |
TGCTCGTGATGCTGTTGAAT+TGG | 0.436779 | 5.1:+6952752 | MS.gene059685:CDS |
TGTAGATTTGTCAACCCTTA+GGG | 0.445313 | 5.1:+6953996 | MS.gene059685:CDS |
CCCAGCCACACATCCCATCT+TGG | 0.449198 | 5.1:-6953068 | None:intergenic |
GATGTTTAAGCTTCCGGCAG+AGG | 0.454660 | 5.1:+6953613 | MS.gene059685:CDS |
TGATGGAAGGATTAGGAGGC+AGG | 0.457704 | 5.1:+6953860 | MS.gene059685:CDS |
TACTTCATAAACATTATTGA+AGG | 0.460027 | 5.1:+6953792 | MS.gene059685:CDS |
GATAAAGTATTTACTTGAAG+AGG | 0.463873 | 5.1:+6952686 | MS.gene059685:CDS |
GGATGTGTGGCTGGGGAGGA+AGG | 0.466895 | 5.1:+6953076 | MS.gene059685:CDS |
AAAACAGGTAGCCATACAAT+AGG | 0.468505 | 5.1:+6953582 | MS.gene059685:intron |
CAAGATGGGATGTGTGGCTG+GGG | 0.483675 | 5.1:+6953069 | MS.gene059685:CDS |
GCCAAGTCTATGATTAAGAT+GGG | 0.486687 | 5.1:+6953927 | MS.gene059685:CDS |
TCCCATCTTAATCATAGACT+TGG | 0.488095 | 5.1:-6953928 | None:intergenic |
CCAAGATGGGATGTGTGGCT+GGG | 0.493544 | 5.1:+6953068 | MS.gene059685:CDS |
TCTAAAGATGAATTTGGAGC+AGG | 0.507269 | 5.1:-6953140 | None:intergenic |
TTACCATAACAAAACAATCA+TGG | 0.512399 | 5.1:-6952369 | None:intergenic |
TGAAGAGAGGAGGACCAAGA+TGG | 0.516172 | 5.1:+6953054 | MS.gene059685:intron |
TCTCACAGTGTCTTCAGCTA+AGG | 0.516840 | 5.1:-6952281 | None:intergenic |
GAAGTGAAGGTGAAATAAGA+AGG | 0.517168 | 5.1:+6953970 | MS.gene059685:CDS |
ATGTGCTGATATTCTTGCAA+TGG | 0.525272 | 5.1:+6952728 | MS.gene059685:CDS |
CCAAATTTGAACTCTTTACG+TGG | 0.530593 | 5.1:+6952645 | MS.gene059685:CDS |
CTCCACTGAAACTTGACTCA+AGG | 0.531127 | 5.1:-6953103 | None:intergenic |
GATGGGATGTGTGGCTGGGG+AGG | 0.531399 | 5.1:+6953072 | MS.gene059685:CDS |
ATGACAAGTGAGAAAGAAGC+TGG | 0.532451 | 5.1:+6952621 | MS.gene059685:CDS |
TCTTGTTCATGATTACTACA+AGG | 0.533843 | 5.1:+6952249 | MS.gene059685:CDS |
GAAGAGAGGAGGACCAAGAT+GGG | 0.542771 | 5.1:+6953055 | MS.gene059685:intron |
TGGAGCAGGGATGAATAGGT+TGG | 0.552780 | 5.1:-6953126 | None:intergenic |
TCCCTTGAGTCAAGTTTCAG+TGG | 0.555521 | 5.1:+6953101 | MS.gene059685:CDS |
CTCACAGTGTCTTCAGCTAA+GGG | 0.559993 | 5.1:-6952280 | None:intergenic |
ATATAAGGGGTGCGATGCAT+CGG | 0.563534 | 5.1:+6952575 | MS.gene059685:intron |
CAGGTAGCCATACAATAGGA+AGG | 0.566465 | 5.1:+6953586 | MS.gene059685:intron |
AATGTTCTTACTGGAAGTGA+AGG | 0.567607 | 5.1:+6953957 | MS.gene059685:CDS |
TCCACTGAAACTTGACTCAA+GGG | 0.577180 | 5.1:-6953102 | None:intergenic |
TCAGTCAAGACTTTGATGGA+AGG | 0.590453 | 5.1:+6953847 | MS.gene059685:CDS |
TTGTTTCATAGATCCTCTGC+CGG | 0.599925 | 5.1:-6953626 | None:intergenic |
AGGATTAGGAGGCAGGTTTG+GGG | 0.605235 | 5.1:+6953867 | MS.gene059685:CDS |
ACTTTGATGGAAGGATTAGG+AGG | 0.606364 | 5.1:+6953856 | MS.gene059685:CDS |
CCATATGTCCTATTACCGGA+AGG | 0.607440 | 5.1:+6953715 | MS.gene059685:CDS |
CTAAAGATGAATTTGGAGCA+GGG | 0.616673 | 5.1:-6953139 | None:intergenic |
TCTGGATATTGAAGACCTTG+TGG | 0.629490 | 5.1:+6953193 | MS.gene059685:CDS |
AGTAGTGATGCTGCTAAACG+TGG | 0.631187 | 5.1:-6952334 | None:intergenic |
TTTGGTGTTTGAAAATCAAG+GGG | 0.635113 | 5.1:-6953753 | None:intergenic |
GGACCGTAGGACTCTTCTGA+AGG | 0.636543 | 5.1:-6953694 | None:intergenic |
AGGTAGCCATACAATAGGAA+GGG | 0.640344 | 5.1:+6953587 | MS.gene059685:intron |
CATATGTCCTATTACCGGAA+GGG | 0.646460 | 5.1:+6953716 | MS.gene059685:CDS |
AAGATCAGTAATAGTCTCAG+AGG | 0.648692 | 5.1:-6952181 | None:intergenic |
TAATAGGACATATGGACCGT+AGG | 0.650725 | 5.1:-6953707 | None:intergenic |
CAACCTTCAGAAGAGTCCTA+CGG | 0.678058 | 5.1:+6953691 | MS.gene059685:CDS |
GAGGACCAAGATGGGATGTG+TGG | 0.689019 | 5.1:+6953063 | MS.gene059685:CDS |
TCAGCACATGAAACAGTGAG+AGG | 0.713764 | 5.1:-6952714 | None:intergenic |
CACTGTGAGACATAACGTAG+CGG | 0.729926 | 5.1:+6952294 | MS.gene059685:CDS |
ATATACCTGATAGAACCACA+AGG | 0.769483 | 5.1:-6953208 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAACATTGTTTATTTCA+TGG | - | chr5.1:6953017-6953036 | None:intergenic | 15.0% |
!! | ATTGTTGAAAATGAATATAA+GGG | + | chr5.1:6952561-6952580 | MS.gene059685:intron | 15.0% |
!! | TTCTTACTAATTAATTAGAA+GGG | + | chr5.1:6953555-6953574 | MS.gene059685:intron | 15.0% |
!!! | AATTAATAATTTTAAGCAAC+AGG | + | chr5.1:6953169-6953188 | MS.gene059685:CDS | 15.0% |
!!! | ATTAATAATTTTAAGCAACA+GGG | + | chr5.1:6953170-6953189 | MS.gene059685:CDS | 15.0% |
!!! | TGACAGTTTTAAATAAAATT+TGG | - | chr5.1:6953427-6953446 | None:intergenic | 15.0% |
!! | AATATTACTACATTGTTCAT+AGG | + | chr5.1:6952987-6953006 | MS.gene059685:intron | 20.0% |
!! | AATTTAGTCCAAAAAATTGT+AGG | + | chr5.1:6953265-6953284 | MS.gene059685:intron | 20.0% |
!! | ATAAACATTATTGAAGGAAA+AGG | + | chr5.1:6953798-6953817 | MS.gene059685:CDS | 20.0% |
!! | ATATTACTACATTGTTCATA+GGG | + | chr5.1:6952988-6953007 | MS.gene059685:intron | 20.0% |
!! | ATTTAGTCCAAAAAATTGTA+GGG | + | chr5.1:6953266-6953285 | MS.gene059685:intron | 20.0% |
!! | GATTGTTGAAAATGAATATA+AGG | + | chr5.1:6952560-6952579 | MS.gene059685:intron | 20.0% |
!! | GTTCTTACTAATTAATTAGA+AGG | + | chr5.1:6953554-6953573 | MS.gene059685:intron | 20.0% |
!! | TACTTCATAAACATTATTGA+AGG | + | chr5.1:6953792-6953811 | MS.gene059685:CDS | 20.0% |
!! | TCTTACTAATTAATTAGAAG+GGG | + | chr5.1:6953556-6953575 | MS.gene059685:intron | 20.0% |
!! | TGTATTGAATCAAGATAATT+TGG | - | chr5.1:6953357-6953376 | None:intergenic | 20.0% |
!! | TTGTTGAAAATGAATATAAG+GGG | + | chr5.1:6952562-6952581 | MS.gene059685:intron | 20.0% |
!!! | AAAGAAAAGTTTTTCATTAG+AGG | - | chr5.1:6953898-6953917 | None:intergenic | 20.0% |
!!! | TACAATTTTTTGGACTAAAT+TGG | - | chr5.1:6953266-6953285 | None:intergenic | 20.0% |
! | CTTACTAATTAATTAGAAGG+GGG | + | chr5.1:6953557-6953576 | MS.gene059685:intron | 25.0% |
! | GAGTTCGGTTATTAAAAAAT+TGG | - | chr5.1:6952831-6952850 | None:intergenic | 25.0% |
! | GGAAATATTAATGTTCTTAC+TGG | + | chr5.1:6953948-6953967 | MS.gene059685:CDS | 25.0% |
! | TTAATGAAAACTTGAAATGC+TGG | - | chr5.1:6952399-6952418 | None:intergenic | 25.0% |
! | TTACCATAACAAAACAATCA+TGG | - | chr5.1:6952372-6952391 | None:intergenic | 25.0% |
!! | GATAAAGTATTTACTTGAAG+AGG | + | chr5.1:6952686-6952705 | MS.gene059685:CDS | 25.0% |
!! | TGTTTTACCCTACAATTTTT+TGG | - | chr5.1:6953276-6953295 | None:intergenic | 25.0% |
!! | TTGATTTTCAAACACCAAAA+CGG | + | chr5.1:6953757-6953776 | MS.gene059685:CDS | 25.0% |
!!! | TATTGATTATCAAACCGTTT+TGG | - | chr5.1:6953774-6953793 | None:intergenic | 25.0% |
!!! | TTTTGGTGTTTGAAAATCAA+GGG | - | chr5.1:6953757-6953776 | None:intergenic | 25.0% |
ACAATAATTGAAAACACCAG+AGG | - | chr5.1:6952504-6952523 | None:intergenic | 30.0% | |
AGAAAAAGAGTAGAGAGAAA+AGG | - | chr5.1:6952790-6952809 | None:intergenic | 30.0% | |
ATTGATTGAACTGTTCAGTT+CGG | + | chr5.1:6952925-6952944 | MS.gene059685:intron | 30.0% | |
CTGCTATTAACTAGTTCAAT+TGG | + | chr5.1:6952964-6952983 | MS.gene059685:intron | 30.0% | |
TCTTGTTCATGATTACTACA+AGG | + | chr5.1:6952249-6952268 | MS.gene059685:CDS | 30.0% | |
! | AAAGCCTCTAAAGATGAATT+TGG | - | chr5.1:6953149-6953168 | None:intergenic | 30.0% |
! | TTCTCTCTACTCTTTTTCTT+TGG | + | chr5.1:6952791-6952810 | MS.gene059685:intron | 30.0% |
!! | CTTCCATGATTGTTTTGTTA+TGG | + | chr5.1:6952366-6952385 | MS.gene059685:CDS | 30.0% |
!! | TTTGGTGTTTGAAAATCAAG+GGG | - | chr5.1:6953756-6953775 | None:intergenic | 30.0% |
!!! | CTATTGTTTGTTTTGAAGAG+AGG | + | chr5.1:6953041-6953060 | MS.gene059685:intron | 30.0% |
!!! | GTTTTGGTGTTTGAAAATCA+AGG | - | chr5.1:6953758-6953777 | None:intergenic | 30.0% |
AAAACAGGTAGCCATACAAT+AGG | + | chr5.1:6953582-6953601 | MS.gene059685:intron | 35.0% | |
AACTGACATTTACTGCTGTT+CGG | - | chr5.1:6952896-6952915 | None:intergenic | 35.0% | |
AAGACTTTGATGGAAGGATT+AGG | + | chr5.1:6953853-6953872 | MS.gene059685:CDS | 35.0% | |
AAGATCAGTAATAGTCTCAG+AGG | - | chr5.1:6952184-6952203 | None:intergenic | 35.0% | |
AATGTTCTTACTGGAAGTGA+AGG | + | chr5.1:6953957-6953976 | MS.gene059685:CDS | 35.0% | |
AATTAGAAGGGGGAAAAAAC+AGG | + | chr5.1:6953567-6953586 | MS.gene059685:intron | 35.0% | |
ACACCTTAGAGTGTGAATAT+TGG | - | chr5.1:6952221-6952240 | None:intergenic | 35.0% | |
ATATACCTGATAGAACCACA+AGG | - | chr5.1:6953211-6953230 | None:intergenic | 35.0% | |
CCAAATTTGAACTCTTTACG+TGG | + | chr5.1:6952645-6952664 | MS.gene059685:CDS | 35.0% | |
CCACGTAAAGAGTTCAAATT+TGG | - | chr5.1:6952648-6952667 | None:intergenic | 35.0% | |
GAAGTGAAGGTGAAATAAGA+AGG | + | chr5.1:6953970-6953989 | MS.gene059685:CDS | 35.0% | |
GCCAAGTCTATGATTAAGAT+GGG | + | chr5.1:6953927-6953946 | MS.gene059685:CDS | 35.0% | |
TCCCATCTTAATCATAGACT+TGG | - | chr5.1:6953931-6953950 | None:intergenic | 35.0% | |
TGCCAAGTCTATGATTAAGA+TGG | + | chr5.1:6953926-6953945 | MS.gene059685:CDS | 35.0% | |
TGCTCCAAATTCATCTTTAG+AGG | + | chr5.1:6953142-6953161 | MS.gene059685:CDS | 35.0% | |
TGTCCAATATTCACACTCTA+AGG | + | chr5.1:6952215-6952234 | MS.gene059685:CDS | 35.0% | |
TTGATCAGTCAAGACTTTGA+TGG | + | chr5.1:6953843-6953862 | MS.gene059685:CDS | 35.0% | |
TTTACTGCTGTTCGGTTATT+TGG | - | chr5.1:6952888-6952907 | None:intergenic | 35.0% | |
! | ATGTGCTGATATTCTTGCAA+TGG | + | chr5.1:6952728-6952747 | MS.gene059685:CDS | 35.0% |
! | ATTGAAGGAAAAGGCTTGTT+AGG | + | chr5.1:6953807-6953826 | MS.gene059685:CDS | 35.0% |
! | CTAAAGATGAATTTGGAGCA+GGG | - | chr5.1:6953142-6953161 | None:intergenic | 35.0% |
! | TAATTTTAAGCAACAGGGTC+TGG | + | chr5.1:6953175-6953194 | MS.gene059685:CDS | 35.0% |
! | TCTAAAGATGAATTTGGAGC+AGG | - | chr5.1:6953143-6953162 | None:intergenic | 35.0% |
!!! | TTGTTTGTTTTGAAGAGAGG+AGG | + | chr5.1:6953044-6953063 | MS.gene059685:intron | 35.0% |
ACTTTGATGGAAGGATTAGG+AGG | + | chr5.1:6953856-6953875 | MS.gene059685:CDS | 40.0% | |
AGGTAGCCATACAATAGGAA+GGG | + | chr5.1:6953587-6953606 | MS.gene059685:intron | 40.0% | |
ATCTTGCCCTTCCTATTGTA+TGG | - | chr5.1:6953596-6953615 | None:intergenic | 40.0% | |
ATGACAAGTGAGAAAGAAGC+TGG | + | chr5.1:6952621-6952640 | MS.gene059685:CDS | 40.0% | |
CATATGTCCTATTACCGGAA+GGG | + | chr5.1:6953716-6953735 | MS.gene059685:CDS | 40.0% | |
TAATAGGACATATGGACCGT+AGG | - | chr5.1:6953710-6953729 | None:intergenic | 40.0% | |
TCAGTCAAGACTTTGATGGA+AGG | + | chr5.1:6953847-6953866 | MS.gene059685:CDS | 40.0% | |
TCCACTGAAACTTGACTCAA+GGG | - | chr5.1:6953105-6953124 | None:intergenic | 40.0% | |
TCTGGATATTGAAGACCTTG+TGG | + | chr5.1:6953193-6953212 | MS.gene059685:CDS | 40.0% | |
TGCAAATTTGTCATCCCTTC+CGG | - | chr5.1:6953733-6953752 | None:intergenic | 40.0% | |
TTGTTTCATAGATCCTCTGC+CGG | - | chr5.1:6953629-6953648 | None:intergenic | 40.0% | |
! | AATTTGGAGCAGGGATGAAT+AGG | - | chr5.1:6953133-6953152 | None:intergenic | 40.0% |
! | TGTTCGGTTATTTGGTGACT+CGG | - | chr5.1:6952880-6952899 | None:intergenic | 40.0% |
!! | GTACTTTTGGACAGTGTTGA+GGG | + | chr5.1:6952597-6952616 | MS.gene059685:CDS | 40.0% |
AAGGATTAGGAGGCAGGTTT+GGG | + | chr5.1:6953866-6953885 | MS.gene059685:CDS | 45.0% | |
AGTAGTGATGCTGCTAAACG+TGG | - | chr5.1:6952337-6952356 | None:intergenic | 45.0% | |
CAACCTTCAGAAGAGTCCTA+CGG | + | chr5.1:6953691-6953710 | MS.gene059685:CDS | 45.0% | |
CACTGTGAGACATAACGTAG+CGG | + | chr5.1:6952294-6952313 | MS.gene059685:CDS | 45.0% | |
CAGGTAGCCATACAATAGGA+AGG | + | chr5.1:6953586-6953605 | MS.gene059685:intron | 45.0% | |
CCATATGTCCTATTACCGGA+AGG | + | chr5.1:6953715-6953734 | MS.gene059685:CDS | 45.0% | |
CCTTCCGGTAATAGGACATA+TGG | - | chr5.1:6953718-6953737 | None:intergenic | 45.0% | |
CGGTCCATATGTCCTATTAC+CGG | + | chr5.1:6953711-6953730 | MS.gene059685:CDS | 45.0% | |
CTCACAGTGTCTTCAGCTAA+GGG | - | chr5.1:6952283-6952302 | None:intergenic | 45.0% | |
CTCCACTGAAACTTGACTCA+AGG | - | chr5.1:6953106-6953125 | None:intergenic | 45.0% | |
GGGCAAGATGTTTAAGCTTC+CGG | + | chr5.1:6953607-6953626 | MS.gene059685:CDS | 45.0% | |
TCAGCACATGAAACAGTGAG+AGG | - | chr5.1:6952717-6952736 | None:intergenic | 45.0% | |
TCCCTTGAGTCAAGTTTCAG+TGG | + | chr5.1:6953101-6953120 | MS.gene059685:CDS | 45.0% | |
TCTCACAGTGTCTTCAGCTA+AGG | - | chr5.1:6952284-6952303 | None:intergenic | 45.0% | |
TGCTCGTGATGCTGTTGAAT+TGG | + | chr5.1:6952752-6952771 | MS.gene059685:CDS | 45.0% | |
TTGCAGTTCGATGTCGAGTT+CGG | - | chr5.1:6952846-6952865 | None:intergenic | 45.0% | |
TTGTCATCCCTTCCGGTAAT+AGG | - | chr5.1:6953726-6953745 | None:intergenic | 45.0% | |
! | ATATAAGGGGTGCGATGCAT+CGG | + | chr5.1:6952575-6952594 | MS.gene059685:intron | 45.0% |
! | GAAGACCTTGTGGTTCTATC+AGG | + | chr5.1:6953203-6953222 | MS.gene059685:CDS | 45.0% |
! | GGTACTTTTGGACAGTGTTG+AGG | + | chr5.1:6952596-6952615 | MS.gene059685:CDS | 45.0% |
!! | GTTATTTGGTGACTCGGTCA+TGG | - | chr5.1:6952874-6952893 | None:intergenic | 45.0% |
AACCACTTGCGTTAGACCTC+TGG | + | chr5.1:6952485-6952504 | MS.gene059685:intron | 50.0% | |
AGAGGTCTAACGCAAGTGGT+TGG | - | chr5.1:6952486-6952505 | None:intergenic | 50.0% | |
AGGATTAGGAGGCAGGTTTG+GGG | + | chr5.1:6953867-6953886 | MS.gene059685:CDS | 50.0% | |
GAAGAGAGGAGGACCAAGAT+GGG | + | chr5.1:6953055-6953074 | MS.gene059685:intron | 50.0% | |
GAAGGATTAGGAGGCAGGTT+TGG | + | chr5.1:6953865-6953884 | MS.gene059685:CDS | 50.0% | |
GATGTTTAAGCTTCCGGCAG+AGG | + | chr5.1:6953613-6953632 | MS.gene059685:CDS | 50.0% | |
TGAAGAGAGGAGGACCAAGA+TGG | + | chr5.1:6953054-6953073 | MS.gene059685:intron | 50.0% | |
TGATGGAAGGATTAGGAGGC+AGG | + | chr5.1:6953860-6953879 | MS.gene059685:CDS | 50.0% | |
TGGAGCAGGGATGAATAGGT+TGG | - | chr5.1:6953129-6953148 | None:intergenic | 50.0% | |
! | TCTAACGCAAGTGGTTGGTG+CGG | - | chr5.1:6952481-6952500 | None:intergenic | 50.0% |
!! | GTGCGATGCATCGGTACTTT+TGG | + | chr5.1:6952584-6952603 | MS.gene059685:CDS | 50.0% |
ACCAAGATGGGATGTGTGGC+TGG | + | chr5.1:6953067-6953086 | MS.gene059685:CDS | 55.0% | |
CAAGATGGGATGTGTGGCTG+GGG | + | chr5.1:6953069-6953088 | MS.gene059685:CDS | 55.0% | |
CACCAGAGGTCTAACGCAAG+TGG | - | chr5.1:6952490-6952509 | None:intergenic | 55.0% | |
CCAAGATGGGATGTGTGGCT+GGG | + | chr5.1:6953068-6953087 | MS.gene059685:CDS | 55.0% | |
GAGGACCAAGATGGGATGTG+TGG | + | chr5.1:6953063-6953082 | MS.gene059685:CDS | 55.0% | |
GGACCGTAGGACTCTTCTGA+AGG | - | chr5.1:6953697-6953716 | None:intergenic | 55.0% | |
CCCAGCCACACATCCCATCT+TGG | - | chr5.1:6953071-6953090 | None:intergenic | 60.0% | |
GATGGGATGTGTGGCTGGGG+AGG | + | chr5.1:6953072-6953091 | MS.gene059685:CDS | 65.0% | |
GGATGTGTGGCTGGGGAGGA+AGG | + | chr5.1:6953076-6953095 | MS.gene059685:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.1 | gene | 6952175 | 6954016 | 6952175 | ID=MS.gene059685 |
chr5.1 | mRNA | 6952175 | 6954016 | 6952175 | ID=MS.gene059685.t1;Parent=MS.gene059685 |
chr5.1 | exon | 6952175 | 6952387 | 6952175 | ID=MS.gene059685.t1.exon1;Parent=MS.gene059685.t1 |
chr5.1 | CDS | 6952175 | 6952387 | 6952175 | ID=cds.MS.gene059685.t1;Parent=MS.gene059685.t1 |
chr5.1 | exon | 6952582 | 6952773 | 6952582 | ID=MS.gene059685.t1.exon2;Parent=MS.gene059685.t1 |
chr5.1 | CDS | 6952582 | 6952773 | 6952582 | ID=cds.MS.gene059685.t1;Parent=MS.gene059685.t1 |
chr5.1 | exon | 6953059 | 6953224 | 6953059 | ID=MS.gene059685.t1.exon3;Parent=MS.gene059685.t1 |
chr5.1 | CDS | 6953059 | 6953224 | 6953059 | ID=cds.MS.gene059685.t1;Parent=MS.gene059685.t1 |
chr5.1 | exon | 6953589 | 6954016 | 6953589 | ID=MS.gene059685.t1.exon4;Parent=MS.gene059685.t1 |
chr5.1 | CDS | 6953589 | 6954016 | 6953589 | ID=cds.MS.gene059685.t1;Parent=MS.gene059685.t1 |
Gene Sequence |
Protein sequence |