Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015325.t1 | XP_003611449.1 | 94 | 332 | 20 | 0 | 1 | 332 | 1 | 332 | 1.70E-181 | 645.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015325.t1 | Q9SLH7 | 64.6 | 325 | 114 | 1 | 7 | 331 | 12 | 335 | 9.1e-120 | 431.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015325.t1 | G7JZV3 | 94.0 | 332 | 20 | 0 | 1 | 332 | 1 | 332 | 1.2e-181 | 645.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene030103 | MS.gene015325 | PPI |
| MS.gene64708 | MS.gene015325 | PPI |
| MS.gene068826 | MS.gene015325 | PPI |
| MS.gene053958 | MS.gene015325 | PPI |
| MS.gene012047 | MS.gene015325 | PPI |
| MS.gene015325 | MS.gene047884 | PPI |
| MS.gene015325 | MS.gene074595 | PPI |
| MS.gene015325 | MS.gene78768 | PPI |
| MS.gene015325 | MS.gene76444 | PPI |
| MS.gene015325 | MS.gene012048 | PPI |
| MS.gene010565 | MS.gene015325 | PPI |
| MS.gene068822 | MS.gene015325 | PPI |
| MS.gene015325 | MS.gene068824 | PPI |
| MS.gene061253 | MS.gene015325 | PPI |
| MS.gene015325 | MS.gene59415 | PPI |
| MS.gene26846 | MS.gene015325 | PPI |
| MS.gene015325 | MS.gene89609 | PPI |
| MS.gene02412 | MS.gene015325 | PPI |
| MS.gene015325 | MS.gene047885 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015325.t1 | MTR_5g014100 | 93.976 | 332 | 20 | 0 | 1 | 332 | 1 | 332 | 0.0 | 632 |
| MS.gene015325.t1 | MTR_8g076820 | 54.459 | 314 | 137 | 3 | 18 | 331 | 23 | 330 | 6.90e-114 | 333 |
| MS.gene015325.t1 | MTR_5g021060 | 53.398 | 309 | 137 | 3 | 24 | 331 | 28 | 330 | 9.01e-112 | 328 |
| MS.gene015325.t1 | MTR_4g122640 | 49.673 | 306 | 147 | 2 | 26 | 331 | 38 | 336 | 1.12e-100 | 300 |
| MS.gene015325.t1 | MTR_1g022970 | 51.961 | 306 | 143 | 2 | 26 | 331 | 46 | 347 | 1.33e-100 | 300 |
| MS.gene015325.t1 | MTR_3g072190 | 47.432 | 331 | 161 | 3 | 1 | 331 | 1 | 318 | 1.14e-97 | 291 |
| MS.gene015325.t1 | MTR_3g094650 | 49.836 | 305 | 138 | 4 | 26 | 328 | 28 | 319 | 1.45e-97 | 291 |
| MS.gene015325.t1 | MTR_7g072510 | 48.220 | 309 | 147 | 3 | 23 | 331 | 17 | 312 | 2.14e-97 | 291 |
| MS.gene015325.t1 | MTR_5g083860 | 48.624 | 327 | 153 | 4 | 7 | 331 | 12 | 325 | 3.81e-97 | 290 |
| MS.gene015325.t1 | MTR_2g084080 | 45.921 | 331 | 165 | 4 | 1 | 331 | 1 | 317 | 5.34e-97 | 290 |
| MS.gene015325.t1 | MTR_3g466200 | 49.359 | 312 | 142 | 6 | 23 | 331 | 22 | 320 | 6.31e-96 | 287 |
| MS.gene015325.t1 | MTR_5g049280 | 47.910 | 311 | 151 | 4 | 26 | 331 | 33 | 337 | 1.96e-95 | 286 |
| MS.gene015325.t1 | MTR_2g029560 | 48.065 | 310 | 157 | 2 | 22 | 331 | 20 | 325 | 3.11e-95 | 286 |
| MS.gene015325.t1 | MTR_4g029170 | 50.000 | 308 | 139 | 4 | 26 | 331 | 27 | 321 | 4.05e-95 | 285 |
| MS.gene015325.t1 | MTR_2g084110 | 45.921 | 331 | 165 | 5 | 1 | 331 | 1 | 317 | 9.89e-95 | 284 |
| MS.gene015325.t1 | MTR_2g084020 | 46.108 | 334 | 161 | 6 | 1 | 331 | 1 | 318 | 1.07e-94 | 284 |
| MS.gene015325.t1 | MTR_7g072480 | 49.191 | 309 | 144 | 3 | 23 | 331 | 21 | 316 | 1.96e-94 | 283 |
| MS.gene015325.t1 | MTR_2g084010 | 45.619 | 331 | 167 | 4 | 1 | 331 | 1 | 318 | 2.19e-93 | 281 |
| MS.gene015325.t1 | MTR_2g040000 | 49.673 | 306 | 143 | 5 | 30 | 331 | 33 | 331 | 8.73e-93 | 280 |
| MS.gene015325.t1 | MTR_4g125940 | 47.883 | 307 | 154 | 3 | 26 | 331 | 28 | 329 | 1.16e-92 | 279 |
| MS.gene015325.t1 | MTR_4g029190 | 47.812 | 320 | 156 | 3 | 12 | 331 | 32 | 340 | 2.59e-92 | 279 |
| MS.gene015325.t1 | MTR_3g094670 | 49.026 | 308 | 142 | 4 | 26 | 331 | 28 | 322 | 1.17e-91 | 276 |
| MS.gene015325.t1 | MTR_7g093370 | 47.231 | 307 | 157 | 3 | 26 | 331 | 69 | 371 | 1.21e-91 | 278 |
| MS.gene015325.t1 | MTR_4g029180 | 48.525 | 305 | 142 | 5 | 29 | 331 | 30 | 321 | 2.61e-91 | 275 |
| MS.gene015325.t1 | MTR_2g084090 | 46.154 | 325 | 159 | 5 | 10 | 331 | 7 | 318 | 3.83e-91 | 275 |
| MS.gene015325.t1 | MTR_2g029730 | 47.302 | 315 | 160 | 3 | 17 | 331 | 18 | 326 | 6.63e-91 | 275 |
| MS.gene015325.t1 | MTR_4g029200 | 46.417 | 321 | 157 | 4 | 12 | 331 | 32 | 338 | 7.45e-91 | 275 |
| MS.gene015325.t1 | MTR_1g115900 | 46.626 | 326 | 156 | 6 | 8 | 331 | 12 | 321 | 9.86e-91 | 274 |
| MS.gene015325.t1 | MTR_2g029850 | 47.386 | 306 | 157 | 2 | 26 | 331 | 29 | 330 | 1.30e-90 | 275 |
| MS.gene015325.t1 | MTR_2g029800 | 47.351 | 302 | 155 | 2 | 30 | 331 | 33 | 330 | 3.38e-90 | 274 |
| MS.gene015325.t1 | MTR_1g054205 | 46.535 | 303 | 157 | 3 | 30 | 331 | 28 | 326 | 3.63e-90 | 273 |
| MS.gene015325.t1 | MTR_4g083710 | 45.619 | 331 | 165 | 5 | 4 | 331 | 6 | 324 | 1.56e-89 | 271 |
| MS.gene015325.t1 | MTR_2g029815 | 44.411 | 331 | 180 | 2 | 1 | 331 | 4 | 330 | 4.87e-89 | 271 |
| MS.gene015325.t1 | MTR_3g094630 | 47.024 | 336 | 159 | 7 | 1 | 331 | 1 | 322 | 5.76e-89 | 270 |
| MS.gene015325.t1 | MTR_5g074970 | 48.710 | 310 | 142 | 5 | 26 | 331 | 30 | 326 | 2.54e-88 | 268 |
| MS.gene015325.t1 | MTR_2g029820 | 47.020 | 302 | 156 | 2 | 30 | 331 | 33 | 330 | 6.84e-88 | 268 |
| MS.gene015325.t1 | MTR_5g074860 | 44.643 | 336 | 163 | 8 | 2 | 330 | 5 | 324 | 1.21e-87 | 266 |
| MS.gene015325.t1 | MTR_2g029860 | 46.358 | 302 | 158 | 2 | 30 | 331 | 33 | 330 | 3.23e-87 | 266 |
| MS.gene015325.t1 | MTR_2g029830 | 46.580 | 307 | 158 | 4 | 26 | 331 | 28 | 329 | 4.22e-87 | 266 |
| MS.gene015325.t1 | MTR_2g084000 | 43.505 | 331 | 175 | 4 | 1 | 331 | 1 | 319 | 7.17e-87 | 264 |
| MS.gene015325.t1 | MTR_4g125940 | 49.281 | 278 | 135 | 3 | 55 | 331 | 2 | 274 | 8.28e-87 | 262 |
| MS.gene015325.t1 | MTR_3g466180 | 47.095 | 327 | 153 | 4 | 6 | 331 | 16 | 323 | 1.31e-86 | 263 |
| MS.gene015325.t1 | MTR_2g029750 | 45.338 | 311 | 156 | 3 | 26 | 331 | 29 | 330 | 1.33e-85 | 262 |
| MS.gene015325.t1 | MTR_5g074760 | 47.249 | 309 | 148 | 6 | 26 | 331 | 25 | 321 | 2.02e-85 | 260 |
| MS.gene015325.t1 | MTR_2g029910 | 46.053 | 304 | 159 | 3 | 29 | 331 | 33 | 332 | 2.03e-85 | 261 |
| MS.gene015325.t1 | MTR_7g026990 | 45.538 | 325 | 162 | 5 | 7 | 331 | 13 | 322 | 4.31e-85 | 259 |
| MS.gene015325.t1 | MTR_5g017850 | 45.603 | 307 | 159 | 4 | 26 | 331 | 27 | 326 | 1.13e-84 | 259 |
| MS.gene015325.t1 | MTR_5g074710 | 47.097 | 310 | 147 | 7 | 26 | 331 | 25 | 321 | 1.86e-84 | 258 |
| MS.gene015325.t1 | MTR_4g074995 | 46.078 | 306 | 144 | 3 | 26 | 331 | 24 | 308 | 4.93e-84 | 256 |
| MS.gene015325.t1 | MTR_2g028980 | 43.413 | 334 | 182 | 3 | 1 | 331 | 1 | 330 | 8.67e-84 | 257 |
| MS.gene015325.t1 | MTR_5g074740 | 46.926 | 309 | 149 | 6 | 26 | 331 | 25 | 321 | 1.74e-83 | 255 |
| MS.gene015325.t1 | MTR_2g029740 | 45.277 | 307 | 154 | 4 | 30 | 331 | 33 | 330 | 2.50e-83 | 256 |
| MS.gene015325.t1 | MTR_0155s0040 | 40.964 | 332 | 171 | 7 | 4 | 331 | 5 | 315 | 4.19e-83 | 254 |
| MS.gene015325.t1 | MTR_5g017860 | 45.928 | 307 | 158 | 4 | 26 | 331 | 27 | 326 | 5.96e-83 | 254 |
| MS.gene015325.t1 | MTR_4g074990 | 44.013 | 309 | 143 | 3 | 26 | 331 | 24 | 305 | 1.59e-81 | 250 |
| MS.gene015325.t1 | MTR_4g030890 | 44.040 | 302 | 160 | 4 | 30 | 331 | 104 | 396 | 9.19e-81 | 251 |
| MS.gene015325.t1 | MTR_1g086320 | 42.943 | 333 | 178 | 5 | 4 | 331 | 8 | 333 | 1.22e-80 | 248 |
| MS.gene015325.t1 | MTR_3g467600 | 43.252 | 326 | 171 | 5 | 9 | 331 | 10 | 324 | 2.29e-80 | 248 |
| MS.gene015325.t1 | MTR_1g086490 | 42.183 | 339 | 179 | 4 | 4 | 331 | 8 | 340 | 2.90e-80 | 248 |
| MS.gene015325.t1 | MTR_3g072190 | 48.669 | 263 | 122 | 3 | 69 | 331 | 2 | 251 | 1.08e-78 | 241 |
| MS.gene015325.t1 | MTR_4g031140 | 43.092 | 304 | 160 | 5 | 30 | 331 | 32 | 324 | 5.10e-78 | 242 |
| MS.gene015325.t1 | MTR_5g022870 | 41.390 | 331 | 179 | 7 | 1 | 331 | 1 | 316 | 5.60e-77 | 239 |
| MS.gene015325.t1 | MTR_1g101830 | 41.867 | 332 | 176 | 9 | 3 | 331 | 5 | 322 | 9.10e-77 | 238 |
| MS.gene015325.t1 | MTR_4g046713 | 41.411 | 326 | 180 | 5 | 6 | 331 | 12 | 326 | 1.90e-76 | 238 |
| MS.gene015325.t1 | MTR_1g077000 | 40.483 | 331 | 180 | 6 | 1 | 331 | 14 | 327 | 1.03e-75 | 236 |
| MS.gene015325.t1 | MTR_3g092990 | 41.493 | 335 | 183 | 6 | 1 | 331 | 1 | 326 | 3.41e-75 | 234 |
| MS.gene015325.t1 | MTR_2g088770 | 42.574 | 303 | 166 | 5 | 30 | 331 | 30 | 325 | 1.29e-74 | 233 |
| MS.gene015325.t1 | MTR_8g075100 | 42.671 | 307 | 162 | 7 | 26 | 331 | 26 | 319 | 3.33e-74 | 231 |
| MS.gene015325.t1 | MTR_4g133800 | 45.215 | 303 | 151 | 7 | 30 | 331 | 45 | 333 | 1.63e-73 | 230 |
| MS.gene015325.t1 | MTR_7g107520 | 42.157 | 306 | 167 | 4 | 26 | 331 | 25 | 320 | 1.43e-72 | 228 |
| MS.gene015325.t1 | MTR_4g074980 | 40.367 | 327 | 159 | 5 | 5 | 331 | 4 | 294 | 5.25e-72 | 225 |
| MS.gene015325.t1 | MTR_4g074980 | 44.922 | 256 | 135 | 1 | 5 | 260 | 4 | 253 | 1.83e-71 | 222 |
| MS.gene015325.t1 | MTR_4g114210 | 43.396 | 318 | 164 | 7 | 19 | 331 | 14 | 320 | 4.02e-71 | 224 |
| MS.gene015325.t1 | MTR_7g086870 | 40.066 | 302 | 165 | 5 | 30 | 331 | 26 | 311 | 6.68e-71 | 223 |
| MS.gene015325.t1 | MTR_2g029830 | 45.769 | 260 | 137 | 2 | 72 | 331 | 6 | 261 | 6.68e-71 | 222 |
| MS.gene015325.t1 | MTR_1g038680 | 42.484 | 306 | 166 | 6 | 30 | 331 | 33 | 332 | 7.30e-70 | 221 |
| MS.gene015325.t1 | MTR_2g437770 | 44.156 | 308 | 156 | 9 | 25 | 331 | 49 | 341 | 1.22e-69 | 221 |
| MS.gene015325.t1 | MTR_4g132490 | 37.273 | 330 | 198 | 6 | 3 | 331 | 6 | 327 | 2.46e-69 | 219 |
| MS.gene015325.t1 | MTR_6g027440 | 41.722 | 302 | 164 | 6 | 30 | 331 | 25 | 314 | 2.60e-69 | 219 |
| MS.gene015325.t1 | MTR_7g086820 | 40.066 | 302 | 168 | 5 | 30 | 331 | 24 | 312 | 2.46e-68 | 216 |
| MS.gene015325.t1 | MTR_2g008710 | 39.939 | 328 | 184 | 6 | 7 | 331 | 8 | 325 | 3.91e-68 | 216 |
| MS.gene015325.t1 | MTR_1g025980 | 40.000 | 325 | 180 | 9 | 7 | 330 | 7 | 317 | 5.12e-68 | 216 |
| MS.gene015325.t1 | MTR_2g099175 | 39.286 | 336 | 182 | 7 | 7 | 331 | 11 | 335 | 1.18e-67 | 215 |
| MS.gene015325.t1 | MTR_7g029030 | 37.651 | 332 | 194 | 5 | 1 | 331 | 1 | 320 | 2.23e-67 | 214 |
| MS.gene015325.t1 | MTR_5g074860 | 37.798 | 336 | 147 | 7 | 2 | 330 | 5 | 285 | 1.72e-65 | 208 |
| MS.gene015325.t1 | MTR_1g090760 | 37.195 | 328 | 196 | 6 | 3 | 327 | 6 | 326 | 2.22e-65 | 209 |
| MS.gene015325.t1 | MTR_4g087965 | 40.446 | 314 | 176 | 6 | 19 | 327 | 35 | 342 | 3.09e-65 | 209 |
| MS.gene015325.t1 | MTR_3g105790 | 38.973 | 331 | 193 | 5 | 1 | 331 | 1 | 322 | 3.67e-64 | 206 |
| MS.gene015325.t1 | MTR_8g062780 | 38.217 | 314 | 174 | 5 | 26 | 331 | 23 | 324 | 4.47e-64 | 206 |
| MS.gene015325.t1 | MTR_1g066380 | 37.821 | 312 | 178 | 5 | 23 | 331 | 25 | 323 | 7.05e-64 | 205 |
| MS.gene015325.t1 | MTR_6g043460 | 37.037 | 324 | 184 | 7 | 6 | 327 | 19 | 324 | 7.36e-64 | 206 |
| MS.gene015325.t1 | MTR_3g092990 | 39.403 | 335 | 179 | 7 | 1 | 331 | 1 | 315 | 9.14e-64 | 205 |
| MS.gene015325.t1 | MTR_0286s0010 | 38.065 | 310 | 179 | 6 | 26 | 331 | 34 | 334 | 2.27e-63 | 204 |
| MS.gene015325.t1 | MTR_6g008075 | 38.065 | 310 | 179 | 6 | 26 | 331 | 34 | 334 | 2.27e-63 | 204 |
| MS.gene015325.t1 | MTR_6g043280 | 37.540 | 309 | 173 | 6 | 26 | 331 | 41 | 332 | 3.10e-63 | 204 |
| MS.gene015325.t1 | MTR_1g066710 | 36.422 | 313 | 184 | 4 | 22 | 331 | 23 | 323 | 3.14e-62 | 201 |
| MS.gene015325.t1 | MTR_6g043240 | 37.013 | 308 | 174 | 6 | 26 | 331 | 42 | 331 | 1.63e-61 | 200 |
| MS.gene015325.t1 | MTR_1g066640 | 36.422 | 313 | 184 | 5 | 22 | 331 | 23 | 323 | 2.93e-61 | 199 |
| MS.gene015325.t1 | MTR_1g009750 | 37.805 | 328 | 188 | 8 | 8 | 331 | 13 | 328 | 7.61e-61 | 197 |
| MS.gene015325.t1 | MTR_5g016010 | 35.928 | 334 | 204 | 5 | 1 | 330 | 1 | 328 | 1.76e-60 | 197 |
| MS.gene015325.t1 | MTR_4g127670 | 39.016 | 305 | 174 | 6 | 26 | 327 | 24 | 319 | 4.77e-60 | 195 |
| MS.gene015325.t1 | MTR_2g067440 | 35.294 | 340 | 180 | 9 | 19 | 327 | 53 | 383 | 6.75e-58 | 192 |
| MS.gene015325.t1 | MTR_2g078610 | 35.000 | 340 | 182 | 7 | 20 | 327 | 70 | 402 | 1.09e-57 | 192 |
| MS.gene015325.t1 | MTR_1g066680 | 35.783 | 313 | 185 | 6 | 22 | 331 | 23 | 322 | 9.21e-57 | 187 |
| MS.gene015325.t1 | MTR_2g077990 | 35.000 | 340 | 182 | 7 | 20 | 327 | 70 | 402 | 3.20e-56 | 188 |
| MS.gene015325.t1 | MTR_2g008160 | 38.924 | 316 | 180 | 8 | 20 | 331 | 17 | 323 | 2.45e-55 | 183 |
| MS.gene015325.t1 | MTR_5g033470 | 39.172 | 314 | 174 | 10 | 26 | 331 | 73 | 377 | 5.43e-55 | 184 |
| MS.gene015325.t1 | MTR_4g095450 | 37.582 | 306 | 175 | 7 | 26 | 327 | 27 | 320 | 7.06e-55 | 182 |
| MS.gene015325.t1 | MTR_4g132110 | 35.806 | 310 | 182 | 6 | 26 | 331 | 32 | 328 | 1.40e-53 | 179 |
| MS.gene015325.t1 | MTR_1g066380 | 36.981 | 265 | 152 | 4 | 70 | 331 | 3 | 255 | 2.51e-53 | 176 |
| MS.gene015325.t1 | MTR_4g132110 | 35.873 | 315 | 180 | 8 | 26 | 331 | 32 | 333 | 8.41e-52 | 174 |
| MS.gene015325.t1 | MTR_2g078280 | 34.848 | 330 | 176 | 7 | 20 | 317 | 70 | 392 | 1.30e-51 | 176 |
| MS.gene015325.t1 | MTR_3g072210 | 46.939 | 196 | 91 | 4 | 137 | 331 | 55 | 238 | 4.58e-49 | 164 |
| MS.gene015325.t1 | MTR_1g009750 | 34.663 | 326 | 184 | 9 | 8 | 331 | 13 | 311 | 1.72e-48 | 165 |
| MS.gene015325.t1 | MTR_2g008730 | 34.139 | 331 | 180 | 7 | 4 | 331 | 6 | 301 | 1.87e-48 | 165 |
| MS.gene015325.t1 | MTR_2g067450 | 34.185 | 313 | 196 | 5 | 20 | 330 | 5 | 309 | 3.09e-47 | 162 |
| MS.gene015325.t1 | MTR_5g074700 | 41.250 | 240 | 112 | 7 | 95 | 331 | 1 | 214 | 1.04e-46 | 157 |
| MS.gene015325.t1 | MTR_0147s0010 | 33.841 | 328 | 173 | 6 | 25 | 330 | 76 | 381 | 1.02e-45 | 160 |
| MS.gene015325.t1 | MTR_2g008160 | 35.443 | 316 | 156 | 7 | 20 | 331 | 17 | 288 | 7.29e-44 | 152 |
| MS.gene015325.t1 | MTR_7g072490 | 39.764 | 254 | 86 | 3 | 71 | 324 | 1 | 187 | 1.56e-43 | 149 |
| MS.gene015325.t1 | MTR_3g105790 | 38.800 | 250 | 148 | 3 | 82 | 331 | 2 | 246 | 2.26e-43 | 150 |
| MS.gene015325.t1 | MTR_2g029880 | 43.299 | 194 | 96 | 4 | 138 | 331 | 9 | 188 | 5.80e-40 | 140 |
| MS.gene015325.t1 | MTR_2g008160 | 44.571 | 175 | 92 | 4 | 22 | 195 | 19 | 189 | 1.09e-37 | 134 |
| MS.gene015325.t1 | MTR_3g072260 | 51.128 | 133 | 65 | 0 | 1 | 133 | 1 | 133 | 6.20e-37 | 130 |
| MS.gene015325.t1 | MTR_3g462850 | 38.608 | 158 | 64 | 5 | 190 | 331 | 9 | 149 | 3.39e-25 | 99.4 |
| MS.gene015325.t1 | MTR_7g086790 | 41.667 | 120 | 66 | 2 | 73 | 192 | 17 | 132 | 1.70e-23 | 96.3 |
| MS.gene015325.t1 | MTR_1g089005 | 43.333 | 120 | 61 | 2 | 25 | 138 | 14 | 132 | 7.71e-22 | 90.5 |
| MS.gene015325.t1 | MTR_2g077980 | 28.571 | 294 | 161 | 12 | 78 | 331 | 1 | 285 | 1.05e-21 | 93.6 |
| MS.gene015325.t1 | MTR_4g114220 | 55.952 | 84 | 27 | 2 | 52 | 135 | 29 | 102 | 8.79e-21 | 87.4 |
| MS.gene015325.t1 | MTR_6g048160 | 61.972 | 71 | 23 | 2 | 65 | 135 | 22 | 88 | 1.89e-20 | 84.7 |
| MS.gene015325.t1 | MTR_7g086785 | 35.766 | 137 | 81 | 3 | 72 | 205 | 4 | 136 | 3.37e-18 | 80.1 |
| MS.gene015325.t1 | MTR_1g098320 | 42.683 | 82 | 44 | 1 | 250 | 331 | 46 | 124 | 1.46e-17 | 78.6 |
| MS.gene015325.t1 | MTR_4g012865 | 47.826 | 69 | 36 | 0 | 25 | 93 | 76 | 144 | 1.99e-16 | 75.9 |
| MS.gene015325.t1 | MTR_4g031040 | 34.270 | 178 | 70 | 4 | 85 | 262 | 1 | 131 | 2.48e-16 | 75.1 |
| MS.gene015325.t1 | MTR_5g058120 | 30.723 | 166 | 98 | 4 | 162 | 327 | 7 | 155 | 3.54e-16 | 77.4 |
| MS.gene015325.t1 | MTR_2g029930 | 36.207 | 116 | 45 | 4 | 7 | 108 | 1 | 101 | 4.17e-15 | 70.9 |
| MS.gene015325.t1 | MTR_3g107060 | 26.740 | 273 | 124 | 8 | 57 | 315 | 105 | 315 | 3.87e-14 | 72.4 |
| MS.gene015325.t1 | MTR_7g086810 | 34.513 | 113 | 48 | 1 | 31 | 143 | 11 | 97 | 3.57e-13 | 68.6 |
| MS.gene015325.t1 | MTR_7g107500 | 39.080 | 87 | 49 | 1 | 245 | 331 | 15 | 97 | 5.34e-13 | 64.7 |
| MS.gene015325.t1 | MTR_5g074770 | 39.785 | 93 | 48 | 3 | 241 | 330 | 21 | 108 | 6.37e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015325.t1 | AT2G35380 | 64.615 | 325 | 114 | 1 | 7 | 331 | 12 | 335 | 4.23e-155 | 438 |
| MS.gene015325.t1 | AT2G35380 | 66.397 | 247 | 83 | 0 | 85 | 331 | 1 | 247 | 8.61e-121 | 348 |
| MS.gene015325.t1 | AT5G66390 | 53.268 | 306 | 138 | 2 | 26 | 331 | 33 | 333 | 1.34e-110 | 325 |
| MS.gene015325.t1 | AT3G50990 | 52.614 | 306 | 140 | 3 | 26 | 331 | 41 | 341 | 7.25e-110 | 323 |
| MS.gene015325.t1 | AT2G18150 | 51.634 | 306 | 143 | 2 | 26 | 331 | 36 | 336 | 1.73e-106 | 315 |
| MS.gene015325.t1 | AT1G44970 | 52.941 | 306 | 140 | 3 | 26 | 331 | 45 | 346 | 4.24e-105 | 311 |
| MS.gene015325.t1 | AT4G36430 | 51.634 | 306 | 143 | 2 | 26 | 331 | 30 | 330 | 3.62e-104 | 308 |
| MS.gene015325.t1 | AT4G16270 | 50.809 | 309 | 141 | 5 | 26 | 331 | 48 | 348 | 7.58e-101 | 301 |
| MS.gene015325.t1 | AT2G18140 | 49.346 | 306 | 150 | 2 | 26 | 331 | 35 | 335 | 7.80e-100 | 298 |
| MS.gene015325.t1 | AT5G06720 | 46.319 | 326 | 170 | 3 | 6 | 331 | 13 | 333 | 1.09e-98 | 295 |
| MS.gene015325.t1 | AT1G68850 | 43.988 | 341 | 171 | 6 | 4 | 331 | 2 | 335 | 1.20e-93 | 282 |
| MS.gene015325.t1 | AT5G06730 | 43.558 | 326 | 179 | 3 | 6 | 331 | 14 | 334 | 2.01e-93 | 282 |
| MS.gene015325.t1 | AT5G58390 | 48.328 | 329 | 150 | 6 | 6 | 331 | 5 | 316 | 1.66e-92 | 278 |
| MS.gene015325.t1 | AT5G19890 | 46.769 | 325 | 162 | 6 | 9 | 331 | 12 | 327 | 6.84e-92 | 277 |
| MS.gene015325.t1 | AT3G32980 | 45.570 | 316 | 168 | 2 | 17 | 331 | 22 | 334 | 1.04e-91 | 278 |
| MS.gene015325.t1 | AT5G58400 | 47.416 | 329 | 153 | 7 | 6 | 331 | 14 | 325 | 4.40e-91 | 275 |
| MS.gene015325.t1 | AT2G38390 | 46.753 | 308 | 159 | 3 | 26 | 332 | 31 | 334 | 1.35e-89 | 272 |
| MS.gene015325.t1 | AT3G49120 | 43.987 | 316 | 173 | 2 | 17 | 331 | 23 | 335 | 2.51e-88 | 269 |
| MS.gene015325.t1 | AT5G05340 | 46.104 | 308 | 151 | 5 | 26 | 331 | 30 | 324 | 4.90e-88 | 267 |
| MS.gene015325.t1 | AT1G49570 | 46.885 | 305 | 157 | 3 | 26 | 329 | 48 | 348 | 9.07e-88 | 267 |
| MS.gene015325.t1 | AT3G49110 | 45.277 | 307 | 164 | 2 | 26 | 331 | 33 | 336 | 2.12e-87 | 266 |
| MS.gene015325.t1 | AT1G14550 | 42.598 | 331 | 172 | 6 | 4 | 331 | 6 | 321 | 3.10e-86 | 263 |
| MS.gene015325.t1 | AT2G38380 | 46.557 | 305 | 158 | 3 | 29 | 332 | 34 | 334 | 3.99e-86 | 263 |
| MS.gene015325.t1 | AT4G08780 | 44.951 | 307 | 165 | 2 | 26 | 331 | 24 | 327 | 9.87e-86 | 262 |
| MS.gene015325.t1 | AT2G22420 | 43.293 | 328 | 171 | 5 | 4 | 331 | 7 | 319 | 3.49e-85 | 260 |
| MS.gene015325.t1 | AT4G08770 | 45.603 | 307 | 163 | 2 | 26 | 331 | 24 | 327 | 1.07e-84 | 259 |
| MS.gene015325.t1 | AT1G14540 | 44.040 | 302 | 158 | 3 | 30 | 331 | 25 | 315 | 3.43e-84 | 257 |
| MS.gene015325.t1 | AT5G19880 | 44.277 | 332 | 172 | 5 | 3 | 331 | 8 | 329 | 2.42e-79 | 245 |
| MS.gene015325.t1 | AT3G03670 | 45.307 | 309 | 156 | 6 | 26 | 331 | 23 | 321 | 1.70e-78 | 243 |
| MS.gene015325.t1 | AT5G51890 | 42.249 | 329 | 172 | 10 | 8 | 331 | 7 | 322 | 1.34e-75 | 235 |
| MS.gene015325.t1 | AT2G41480 | 43.333 | 330 | 170 | 8 | 7 | 331 | 11 | 328 | 2.05e-74 | 233 |
| MS.gene015325.t1 | AT1G05260 | 42.345 | 307 | 169 | 5 | 26 | 331 | 26 | 325 | 3.90e-74 | 232 |
| MS.gene015325.t1 | AT5G64120 | 44.040 | 302 | 157 | 5 | 30 | 331 | 39 | 328 | 2.80e-73 | 229 |
| MS.gene015325.t1 | AT5G17820 | 42.384 | 302 | 158 | 6 | 30 | 331 | 28 | 313 | 9.66e-73 | 228 |
| MS.gene015325.t1 | AT3G21770 | 40.705 | 312 | 178 | 5 | 17 | 327 | 19 | 324 | 1.74e-72 | 228 |
| MS.gene015325.t1 | AT4G33420 | 40.244 | 328 | 176 | 7 | 4 | 331 | 18 | 325 | 4.69e-72 | 226 |
| MS.gene015325.t1 | AT4G33420 | 40.244 | 328 | 176 | 7 | 4 | 331 | 65 | 372 | 1.80e-71 | 226 |
| MS.gene015325.t1 | AT1G05240 | 42.122 | 311 | 168 | 6 | 24 | 331 | 24 | 325 | 2.04e-71 | 225 |
| MS.gene015325.t1 | AT1G05250 | 42.122 | 311 | 168 | 6 | 24 | 331 | 24 | 325 | 2.04e-71 | 225 |
| MS.gene015325.t1 | AT5G17820 | 42.384 | 302 | 158 | 6 | 30 | 331 | 81 | 366 | 3.34e-71 | 226 |
| MS.gene015325.t1 | AT5G15180 | 42.244 | 303 | 165 | 6 | 30 | 331 | 36 | 329 | 4.77e-71 | 224 |
| MS.gene015325.t1 | AT1G71695 | 40.984 | 305 | 164 | 6 | 26 | 327 | 44 | 335 | 7.66e-71 | 224 |
| MS.gene015325.t1 | AT4G11290 | 39.039 | 333 | 194 | 6 | 1 | 331 | 1 | 326 | 1.45e-70 | 223 |
| MS.gene015325.t1 | AT5G42180 | 41.463 | 328 | 174 | 7 | 4 | 330 | 6 | 316 | 5.52e-69 | 218 |
| MS.gene015325.t1 | AT2G39040 | 42.857 | 315 | 161 | 8 | 26 | 331 | 46 | 350 | 1.55e-68 | 218 |
| MS.gene015325.t1 | AT4G26010 | 41.914 | 303 | 156 | 6 | 30 | 331 | 26 | 309 | 2.45e-68 | 216 |
| MS.gene015325.t1 | AT5G47000 | 38.554 | 332 | 188 | 6 | 3 | 331 | 12 | 330 | 3.89e-68 | 216 |
| MS.gene015325.t1 | AT4G31760 | 40.000 | 325 | 185 | 5 | 7 | 331 | 12 | 326 | 4.35e-68 | 216 |
| MS.gene015325.t1 | AT5G39580 | 41.867 | 332 | 179 | 8 | 1 | 331 | 1 | 319 | 4.65e-68 | 216 |
| MS.gene015325.t1 | AT4G26010 | 41.914 | 303 | 156 | 6 | 30 | 331 | 54 | 337 | 5.24e-68 | 216 |
| MS.gene015325.t1 | AT5G64110 | 41.441 | 333 | 184 | 5 | 1 | 331 | 7 | 330 | 1.07e-67 | 215 |
| MS.gene015325.t1 | AT3G28200 | 38.312 | 308 | 176 | 4 | 26 | 331 | 21 | 316 | 9.61e-67 | 213 |
| MS.gene015325.t1 | AT3G01190 | 40.367 | 327 | 177 | 8 | 6 | 331 | 12 | 321 | 2.75e-66 | 211 |
| MS.gene015325.t1 | AT5G40150 | 39.286 | 308 | 174 | 5 | 26 | 331 | 32 | 328 | 1.20e-65 | 210 |
| MS.gene015325.t1 | AT1G24110 | 40.328 | 305 | 171 | 6 | 26 | 327 | 22 | 318 | 3.01e-65 | 209 |
| MS.gene015325.t1 | AT4G17690 | 40.323 | 310 | 168 | 6 | 26 | 331 | 26 | 322 | 3.04e-65 | 209 |
| MS.gene015325.t1 | AT1G34510 | 41.042 | 307 | 161 | 6 | 26 | 331 | 22 | 309 | 3.66e-65 | 208 |
| MS.gene015325.t1 | AT4G37530 | 40.064 | 312 | 178 | 4 | 23 | 331 | 24 | 329 | 5.38e-65 | 208 |
| MS.gene015325.t1 | AT4G37520 | 39.806 | 309 | 177 | 4 | 26 | 331 | 27 | 329 | 1.02e-64 | 207 |
| MS.gene015325.t1 | AT2G34060 | 41.424 | 309 | 168 | 7 | 26 | 328 | 42 | 343 | 1.76e-63 | 205 |
| MS.gene015325.t1 | AT2G18980 | 40.968 | 310 | 168 | 6 | 26 | 331 | 25 | 323 | 3.11e-63 | 204 |
| MS.gene015325.t1 | AT2G24800 | 40.645 | 310 | 169 | 6 | 26 | 331 | 31 | 329 | 5.73e-63 | 203 |
| MS.gene015325.t1 | AT4G25980 | 39.339 | 333 | 183 | 8 | 4 | 331 | 8 | 326 | 6.24e-62 | 200 |
| MS.gene015325.t1 | AT1G77100 | 39.940 | 333 | 178 | 8 | 6 | 331 | 2 | 319 | 7.07e-62 | 200 |
| MS.gene015325.t1 | AT4G37520 | 39.159 | 309 | 176 | 5 | 26 | 331 | 27 | 326 | 1.21e-61 | 199 |
| MS.gene015325.t1 | AT4G33870 | 35.988 | 339 | 171 | 6 | 26 | 327 | 68 | 397 | 3.88e-61 | 201 |
| MS.gene015325.t1 | AT2G43480 | 39.936 | 313 | 169 | 8 | 26 | 331 | 35 | 335 | 1.29e-60 | 197 |
| MS.gene015325.t1 | AT2G37130 | 37.338 | 308 | 175 | 6 | 29 | 331 | 2 | 296 | 3.18e-60 | 195 |
| MS.gene015325.t1 | AT2G37130 | 37.143 | 315 | 180 | 6 | 22 | 331 | 26 | 327 | 4.81e-60 | 196 |
| MS.gene015325.t1 | AT4G30170 | 38.854 | 314 | 175 | 8 | 23 | 331 | 24 | 325 | 1.19e-59 | 194 |
| MS.gene015325.t1 | AT5G14130 | 34.513 | 339 | 186 | 6 | 4 | 331 | 17 | 330 | 2.67e-59 | 194 |
| MS.gene015325.t1 | AT5G64100 | 41.447 | 304 | 163 | 6 | 30 | 331 | 41 | 331 | 3.82e-59 | 193 |
| MS.gene015325.t1 | AT5G24070 | 37.700 | 313 | 176 | 7 | 26 | 331 | 35 | 335 | 9.28e-59 | 192 |
| MS.gene015325.t1 | AT5G14130 | 34.513 | 339 | 186 | 6 | 4 | 331 | 58 | 371 | 1.04e-58 | 193 |
| MS.gene015325.t1 | AT3G49960 | 37.386 | 329 | 191 | 7 | 7 | 331 | 12 | 329 | 2.36e-58 | 191 |
| MS.gene015325.t1 | AT4G21960 | 37.742 | 310 | 176 | 5 | 26 | 331 | 31 | 327 | 2.05e-57 | 189 |
| MS.gene015325.t1 | AT5G67400 | 36.036 | 333 | 201 | 5 | 5 | 331 | 3 | 329 | 5.28e-57 | 187 |
| MS.gene015325.t1 | AT1G30870 | 39.355 | 310 | 171 | 8 | 25 | 331 | 50 | 345 | 1.32e-56 | 187 |
| MS.gene015325.t1 | AT3G17070 | 36.508 | 315 | 182 | 9 | 24 | 331 | 36 | 339 | 3.53e-55 | 183 |
| MS.gene015325.t1 | AT4G37530 | 40.000 | 260 | 148 | 5 | 23 | 278 | 24 | 279 | 1.56e-51 | 172 |
| MS.gene015325.t1 | AT5G22410 | 33.832 | 334 | 199 | 10 | 1 | 328 | 5 | 322 | 7.26e-50 | 169 |
| MS.gene015325.t1 | AT5G39580 | 43.636 | 220 | 115 | 6 | 1 | 217 | 1 | 214 | 6.73e-44 | 151 |
| MS.gene015325.t1 | AT4G25980 | 44.737 | 190 | 97 | 5 | 4 | 193 | 53 | 234 | 3.21e-41 | 145 |
| MS.gene015325.t1 | AT3G17070 | 34.035 | 285 | 169 | 10 | 54 | 331 | 4 | 276 | 3.59e-40 | 142 |
| MS.gene015325.t1 | AT2G24800 | 45.509 | 167 | 87 | 2 | 26 | 192 | 31 | 193 | 1.86e-37 | 134 |
| MS.gene015325.t1 | AT3G42570 | 34.459 | 148 | 82 | 4 | 46 | 191 | 13 | 147 | 2.51e-15 | 72.8 |
| MS.gene015325.t1 | AT4G32320 | 26.667 | 270 | 122 | 7 | 57 | 312 | 114 | 321 | 1.79e-12 | 67.8 |
Find 79 sgRNAs with CRISPR-Local
Find 122 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGCCTCTAAAGATGAATT+TGG | 0.209973 | 5.4:-8029873 | None:intergenic |
| TGTCAAATATTCACACTCTA+AGG | 0.214649 | 5.4:+8028984 | MS.gene015325:CDS |
| GGAAATATTAATGTTCTTAC+TGG | 0.240350 | 5.4:+8030675 | MS.gene015325:CDS |
| TGCTCCAAATTCATCTTTAG+AGG | 0.250110 | 5.4:+8029869 | MS.gene015325:CDS |
| AAGGATTAGGAGGCAGGTTT+GGG | 0.252670 | 5.4:+8030593 | MS.gene015325:CDS |
| TTGTCATCCCTTCCGGTAAT+AGG | 0.256822 | 5.4:-8030450 | None:intergenic |
| GAAGGATTAGGAGGCAGGTT+TGG | 0.274461 | 5.4:+8030592 | MS.gene015325:CDS |
| CCACGTAAAGAGTTCAAATT+TGG | 0.287872 | 5.4:-8029375 | None:intergenic |
| GTGCGATGCATCGGTACTTT+TGG | 0.290206 | 5.4:+8029314 | MS.gene015325:CDS |
| ATTGAAGGAAAAGGCTTGTT+AGG | 0.300624 | 5.4:+8030534 | MS.gene015325:CDS |
| AATTAATAATTTCAAGCAAC+AGG | 0.312201 | 5.4:+8029896 | MS.gene015325:CDS |
| ACCAAGATGGGATGTGTGGC+TGG | 0.353196 | 5.4:+8029794 | MS.gene015325:CDS |
| GGGCAAAATGTTTAAGCTTC+CGG | 0.353567 | 5.4:+8030334 | MS.gene015325:CDS |
| TGCAAATTTGTCATCCCTTC+CGG | 0.355868 | 5.4:-8030457 | None:intergenic |
| AATTTGGAGCAGGGATGAAT+AGG | 0.364651 | 5.4:-8029857 | None:intergenic |
| TATTGATTATCAAACCGTTT+TGG | 0.372482 | 5.4:-8030498 | None:intergenic |
| TTGTAGATTTGTCAACCCTT+AGG | 0.373734 | 5.4:+8030722 | MS.gene015325:CDS |
| TAATTTCAAGCAACAGGGTC+TGG | 0.383105 | 5.4:+8029902 | MS.gene015325:CDS |
| GAAGACCTGGTGGTTCTATC+AGG | 0.386990 | 5.4:+8029930 | MS.gene015325:CDS |
| ATAAACATTATTGAAGGAAA+AGG | 0.389138 | 5.4:+8030525 | MS.gene015325:CDS |
| TGCTAAGTCTATGATTAAGA+TGG | 0.404255 | 5.4:+8030653 | MS.gene015325:CDS |
| AAGACTTTGATGGAAGGATT+AGG | 0.406088 | 5.4:+8030580 | MS.gene015325:CDS |
| CCTTCCGGTAATAGGACATA+TGG | 0.429530 | 5.4:-8030442 | None:intergenic |
| TTGATCAGTCAAGACTTTGA+TGG | 0.433237 | 5.4:+8030570 | MS.gene015325:CDS |
| CGGTCCATATGTCCTATTAC+CGG | 0.433238 | 5.4:+8030438 | MS.gene015325:CDS |
| TGCTCGTGATGCTGTTGAAT+TGG | 0.436779 | 5.4:+8029482 | MS.gene015325:CDS |
| TGTAGATTTGTCAACCCTTA+GGG | 0.445313 | 5.4:+8030723 | MS.gene015325:CDS |
| CCCAGCCACACATCCCATCT+TGG | 0.449198 | 5.4:-8029795 | None:intergenic |
| TGATGGAAGGATTAGGAGGC+AGG | 0.457704 | 5.4:+8030587 | MS.gene015325:CDS |
| TACTTCATAAACATTATTGA+AGG | 0.460027 | 5.4:+8030519 | MS.gene015325:CDS |
| GTCAAATATTCACACTCTAA+GGG | 0.462872 | 5.4:+8028985 | MS.gene015325:CDS |
| GATAAAATATTTACTTGAAG+AGG | 0.463463 | 5.4:+8029416 | MS.gene015325:CDS |
| GGATGTGTGGCTGGGGAGGA+AGG | 0.466895 | 5.4:+8029803 | MS.gene015325:CDS |
| AAAACAGGTAGCCATACAAT+AGG | 0.468505 | 5.4:+8030309 | MS.gene015325:intron |
| GCTAAGTCTATGATTAAGAT+GGG | 0.481139 | 5.4:+8030654 | MS.gene015325:CDS |
| CAAGATGGGATGTGTGGCTG+GGG | 0.483675 | 5.4:+8029796 | MS.gene015325:CDS |
| AATGTTTAAGCTTCCGGCAG+AGG | 0.489691 | 5.4:+8030340 | MS.gene015325:CDS |
| CCAAGATGGGATGTGTGGCT+GGG | 0.493544 | 5.4:+8029795 | MS.gene015325:CDS |
| TCTAAAGATGAATTTGGAGC+AGG | 0.507269 | 5.4:-8029867 | None:intergenic |
| TTACCATAACAAAACAATCA+TGG | 0.512399 | 5.4:-8029138 | None:intergenic |
| TGAAGAGAGGAGGACCAAGA+TGG | 0.516172 | 5.4:+8029781 | MS.gene015325:intron |
| GAAGTGAAGGTGAAATAAGA+AGG | 0.517168 | 5.4:+8030697 | MS.gene015325:CDS |
| TCTCACTATCCCTTCAGCTA+AGG | 0.524756 | 5.4:-8029050 | None:intergenic |
| ATGTGCTGATATTCTTGCAA+TGG | 0.525272 | 5.4:+8029458 | MS.gene015325:CDS |
| CTCACTATCCCTTCAGCTAA+GGG | 0.526913 | 5.4:-8029049 | None:intergenic |
| CCAAATTTGAACTCTTTACG+TGG | 0.530593 | 5.4:+8029375 | MS.gene015325:CDS |
| CTCCACTGAAACTTGACTCA+AGG | 0.531127 | 5.4:-8029830 | None:intergenic |
| GATGGGATGTGTGGCTGGGG+AGG | 0.531399 | 5.4:+8029799 | MS.gene015325:CDS |
| ATGACAAGTGAGAAAGAAGC+TGG | 0.532451 | 5.4:+8029351 | MS.gene015325:CDS |
| TCTTGTTCATGATTACTACA+AGG | 0.533843 | 5.4:+8029018 | MS.gene015325:CDS |
| GAAGAGAGGAGGACCAAGAT+GGG | 0.542771 | 5.4:+8029782 | MS.gene015325:intron |
| TGGAGCAGGGATGAATAGGT+TGG | 0.552780 | 5.4:-8029853 | None:intergenic |
| TCCCTTGAGTCAAGTTTCAG+TGG | 0.555521 | 5.4:+8029828 | MS.gene015325:CDS |
| ATATAAGGGGTGCGATGCAT+CGG | 0.563534 | 5.4:+8029305 | MS.gene015325:intron |
| CAGGTAGCCATACAATAGGA+AGG | 0.566465 | 5.4:+8030313 | MS.gene015325:intron |
| AATGTTCTTACTGGAAGTGA+AGG | 0.567607 | 5.4:+8030684 | MS.gene015325:CDS |
| TCCACTGAAACTTGACTCAA+GGG | 0.577180 | 5.4:-8029829 | None:intergenic |
| GGGTCTGGATATTGAAGACC+TGG | 0.580083 | 5.4:+8029917 | MS.gene015325:CDS |
| AGTAGCGACGCTGCTATACG+TGG | 0.583453 | 5.4:-8029103 | None:intergenic |
| ATTAATAATTTCAAGCAACA+GGG | 0.589514 | 5.4:+8029897 | MS.gene015325:CDS |
| TCAGTCAAGACTTTGATGGA+AGG | 0.590453 | 5.4:+8030574 | MS.gene015325:CDS |
| TCAAATATTCACACTCTAAG+GGG | 0.598238 | 5.4:+8028986 | MS.gene015325:CDS |
| TTGTTTCATAGATCCTCTGC+CGG | 0.599925 | 5.4:-8030353 | None:intergenic |
| AGGATTAGGAGGCAGGTTTG+GGG | 0.605235 | 5.4:+8030594 | MS.gene015325:CDS |
| ACTTTGATGGAAGGATTAGG+AGG | 0.606364 | 5.4:+8030583 | MS.gene015325:CDS |
| CCATATGTCCTATTACCGGA+AGG | 0.607440 | 5.4:+8030442 | MS.gene015325:CDS |
| CTAAAGATGAATTTGGAGCA+GGG | 0.616673 | 5.4:-8029866 | None:intergenic |
| TTTGGTGTTTGAAAATCAAG+GGG | 0.635113 | 5.4:-8030480 | None:intergenic |
| GGACCGTAGGACTCTTCTGA+AGG | 0.636543 | 5.4:-8030421 | None:intergenic |
| AGGTAGCCATACAATAGGAA+GGG | 0.640344 | 5.4:+8030314 | MS.gene015325:intron |
| CATATGTCCTATTACCGGAA+GGG | 0.646460 | 5.4:+8030443 | MS.gene015325:CDS |
| AAGATCAGTAATAGTCTCAG+AGG | 0.648692 | 5.4:-8028950 | None:intergenic |
| TAATAGGACATATGGACCGT+AGG | 0.650725 | 5.4:-8030434 | None:intergenic |
| CAACCTTCAGAAGAGTCCTA+CGG | 0.678058 | 5.4:+8030418 | MS.gene015325:CDS |
| GAGGACCAAGATGGGATGTG+TGG | 0.689019 | 5.4:+8029790 | MS.gene015325:CDS |
| TCTGGATATTGAAGACCTGG+TGG | 0.695296 | 5.4:+8029920 | MS.gene015325:CDS |
| TCAGCACATGAAACAGTGAG+AGG | 0.713764 | 5.4:-8029444 | None:intergenic |
| ATATACCTGATAGAACCACC+AGG | 0.735429 | 5.4:-8029935 | None:intergenic |
| GATAGTGAGACATAACGTAG+CGG | 0.771195 | 5.4:+8029063 | MS.gene015325:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAAAACATTTTTATTTCA+TGG | - | chr5.4:8029745-8029764 | None:intergenic | 10.0% |
| !! | TTCTTACTAATTAATTAGAA+GGG | + | chr5.4:8030282-8030301 | MS.gene015325:intron | 15.0% |
| !!! | TGACAGTTTTAAATAAAATT+TGG | - | chr5.4:8030154-8030173 | None:intergenic | 15.0% |
| !! | AATTAATAATTTCAAGCAAC+AGG | + | chr5.4:8029896-8029915 | MS.gene015325:CDS | 20.0% |
| !! | AATTTAGTCCAAAAAATTGT+AGG | + | chr5.4:8029992-8030011 | MS.gene015325:intron | 20.0% |
| !! | ATAAACATTATTGAAGGAAA+AGG | + | chr5.4:8030525-8030544 | MS.gene015325:CDS | 20.0% |
| !! | ATATTACTACATTGTTCATA+GGG | + | chr5.4:8029716-8029735 | MS.gene015325:intron | 20.0% |
| !! | ATTAATAATTTCAAGCAACA+GGG | + | chr5.4:8029897-8029916 | MS.gene015325:CDS | 20.0% |
| !! | ATTTAGTCCAAAAAATTGTA+GGG | + | chr5.4:8029993-8030012 | MS.gene015325:intron | 20.0% |
| !! | GATAAAATATTTACTTGAAG+AGG | + | chr5.4:8029416-8029435 | MS.gene015325:CDS | 20.0% |
| !! | GTTCTTACTAATTAATTAGA+AGG | + | chr5.4:8030281-8030300 | MS.gene015325:intron | 20.0% |
| !! | GTTGTTGAAAATGAATATAA+GGG | + | chr5.4:8029291-8029310 | MS.gene015325:intron | 20.0% |
| !! | TACTTCATAAACATTATTGA+AGG | + | chr5.4:8030519-8030538 | MS.gene015325:CDS | 20.0% |
| !! | TCTTACTAATTAATTAGAAG+GGG | + | chr5.4:8030283-8030302 | MS.gene015325:intron | 20.0% |
| !! | TGTATTGAATCAAGATAATT+TGG | - | chr5.4:8030084-8030103 | None:intergenic | 20.0% |
| !! | TTGTTGAAAATGAATATAAG+GGG | + | chr5.4:8029292-8029311 | MS.gene015325:intron | 20.0% |
| !!! | AAAGAAAAGTTTTTCATTAG+AGG | - | chr5.4:8030625-8030644 | None:intergenic | 20.0% |
| !!! | TACAATTTTTTGGACTAAAT+TGG | - | chr5.4:8029993-8030012 | None:intergenic | 20.0% |
| ! | CTTACTAATTAATTAGAAGG+GGG | + | chr5.4:8030284-8030303 | MS.gene015325:intron | 25.0% |
| ! | GAGTTCGGTTATTAAAAAAT+TGG | - | chr5.4:8029560-8029579 | None:intergenic | 25.0% |
| ! | GATATTACTACATTGTTCAT+AGG | + | chr5.4:8029715-8029734 | MS.gene015325:intron | 25.0% |
| ! | GGAAATATTAATGTTCTTAC+TGG | + | chr5.4:8030675-8030694 | MS.gene015325:CDS | 25.0% |
| ! | GGTTGTTGAAAATGAATATA+AGG | + | chr5.4:8029290-8029309 | MS.gene015325:intron | 25.0% |
| ! | TTACCATAACAAAACAATCA+TGG | - | chr5.4:8029141-8029160 | None:intergenic | 25.0% |
| !! | AATCTTGAAGTACTTATACA+TGG | - | chr5.4:8029168-8029187 | None:intergenic | 25.0% |
| !! | TGTTTTACCCTACAATTTTT+TGG | - | chr5.4:8030003-8030022 | None:intergenic | 25.0% |
| !! | TTGATTTTCAAACACCAAAA+CGG | + | chr5.4:8030484-8030503 | MS.gene015325:CDS | 25.0% |
| !!! | TATTGATTATCAAACCGTTT+TGG | - | chr5.4:8030501-8030520 | None:intergenic | 25.0% |
| !!! | TTTTGGTGTTTGAAAATCAA+GGG | - | chr5.4:8030484-8030503 | None:intergenic | 25.0% |
| AAGAAAAAGAGTAGAGAGAA+AGG | - | chr5.4:8029520-8029539 | None:intergenic | 30.0% | |
| AATAATTGAAAACACCGTGT+AGG | - | chr5.4:8029233-8029252 | None:intergenic | 30.0% | |
| ATTGATTGAACTGTTCAGTT+CGG | + | chr5.4:8029654-8029673 | MS.gene015325:intron | 30.0% | |
| CTGCTATTAACTAGTTCAAT+TGG | + | chr5.4:8029693-8029712 | MS.gene015325:intron | 30.0% | |
| GCTAAGTCTATGATTAAGAT+GGG | + | chr5.4:8030654-8030673 | MS.gene015325:CDS | 30.0% | |
| GTCAAATATTCACACTCTAA+GGG | + | chr5.4:8028985-8029004 | MS.gene015325:CDS | 30.0% | |
| TCAAATATTCACACTCTAAG+GGG | + | chr5.4:8028986-8029005 | MS.gene015325:CDS | 30.0% | |
| TCTTGTTCATGATTACTACA+AGG | + | chr5.4:8029018-8029037 | MS.gene015325:CDS | 30.0% | |
| TGCTAAGTCTATGATTAAGA+TGG | + | chr5.4:8030653-8030672 | MS.gene015325:CDS | 30.0% | |
| TGTCAAATATTCACACTCTA+AGG | + | chr5.4:8028984-8029003 | MS.gene015325:CDS | 30.0% | |
| ! | AAAGCCTCTAAAGATGAATT+TGG | - | chr5.4:8029876-8029895 | None:intergenic | 30.0% |
| ! | TTCTCTCTACTCTTTTTCTT+TGG | + | chr5.4:8029520-8029539 | MS.gene015325:intron | 30.0% |
| ! | TTTTTGTCTGTCATACATTG+TGG | + | chr5.4:8029269-8029288 | MS.gene015325:intron | 30.0% |
| !! | CTTCCATGATTGTTTTGTTA+TGG | + | chr5.4:8029135-8029154 | MS.gene015325:CDS | 30.0% |
| !! | TTTGGTGTTTGAAAATCAAG+GGG | - | chr5.4:8030483-8030502 | None:intergenic | 30.0% |
| !!! | CTATTGTTTGTTTTGAAGAG+AGG | + | chr5.4:8029768-8029787 | MS.gene015325:intron | 30.0% |
| !!! | GTTTTGGTGTTTGAAAATCA+AGG | - | chr5.4:8030485-8030504 | None:intergenic | 30.0% |
| AAAAATGTCCCTTAGCTGAA+GGG | + | chr5.4:8029041-8029060 | MS.gene015325:CDS | 35.0% | |
| AAAACAGGTAGCCATACAAT+AGG | + | chr5.4:8030309-8030328 | MS.gene015325:intron | 35.0% | |
| AACTGACATTTACTGCTGTT+CGG | - | chr5.4:8029625-8029644 | None:intergenic | 35.0% | |
| AAGACTTTGATGGAAGGATT+AGG | + | chr5.4:8030580-8030599 | MS.gene015325:CDS | 35.0% | |
| AAGATCAGTAATAGTCTCAG+AGG | - | chr5.4:8028953-8028972 | None:intergenic | 35.0% | |
| AATGTTCTTACTGGAAGTGA+AGG | + | chr5.4:8030684-8030703 | MS.gene015325:CDS | 35.0% | |
| AATTAGAAGGGGGAAAAAAC+AGG | + | chr5.4:8030294-8030313 | MS.gene015325:intron | 35.0% | |
| CCAAATTTGAACTCTTTACG+TGG | + | chr5.4:8029375-8029394 | MS.gene015325:CDS | 35.0% | |
| CCACGTAAAGAGTTCAAATT+TGG | - | chr5.4:8029378-8029397 | None:intergenic | 35.0% | |
| GAAGTGAAGGTGAAATAAGA+AGG | + | chr5.4:8030697-8030716 | MS.gene015325:CDS | 35.0% | |
| TGCTCCAAATTCATCTTTAG+AGG | + | chr5.4:8029869-8029888 | MS.gene015325:CDS | 35.0% | |
| TTGATCAGTCAAGACTTTGA+TGG | + | chr5.4:8030570-8030589 | MS.gene015325:CDS | 35.0% | |
| TTTACTGCTGTTCGGTTATT+TGG | - | chr5.4:8029617-8029636 | None:intergenic | 35.0% | |
| ! | ATGTGCTGATATTCTTGCAA+TGG | + | chr5.4:8029458-8029477 | MS.gene015325:CDS | 35.0% |
| ! | ATTGAAGGAAAAGGCTTGTT+AGG | + | chr5.4:8030534-8030553 | MS.gene015325:CDS | 35.0% |
| ! | ATTTTGCCCTTCCTATTGTA+TGG | - | chr5.4:8030323-8030342 | None:intergenic | 35.0% |
| ! | CTAAAGATGAATTTGGAGCA+GGG | - | chr5.4:8029869-8029888 | None:intergenic | 35.0% |
| ! | TCTAAAGATGAATTTGGAGC+AGG | - | chr5.4:8029870-8029889 | None:intergenic | 35.0% |
| !!! | TTGTTTGTTTTGAAGAGAGG+AGG | + | chr5.4:8029771-8029790 | MS.gene015325:intron | 35.0% |
| ACTTTGATGGAAGGATTAGG+AGG | + | chr5.4:8030583-8030602 | MS.gene015325:CDS | 40.0% | |
| AGGTAGCCATACAATAGGAA+GGG | + | chr5.4:8030314-8030333 | MS.gene015325:intron | 40.0% | |
| ATATACCTGATAGAACCACC+AGG | - | chr5.4:8029938-8029957 | None:intergenic | 40.0% | |
| ATGACAAGTGAGAAAGAAGC+TGG | + | chr5.4:8029351-8029370 | MS.gene015325:CDS | 40.0% | |
| CATATGTCCTATTACCGGAA+GGG | + | chr5.4:8030443-8030462 | MS.gene015325:CDS | 40.0% | |
| GAAAAATGTCCCTTAGCTGA+AGG | + | chr5.4:8029040-8029059 | MS.gene015325:CDS | 40.0% | |
| GATAGTGAGACATAACGTAG+CGG | + | chr5.4:8029063-8029082 | MS.gene015325:CDS | 40.0% | |
| GGGCAAAATGTTTAAGCTTC+CGG | + | chr5.4:8030334-8030353 | MS.gene015325:CDS | 40.0% | |
| TAATAGGACATATGGACCGT+AGG | - | chr5.4:8030437-8030456 | None:intergenic | 40.0% | |
| TAATTTCAAGCAACAGGGTC+TGG | + | chr5.4:8029902-8029921 | MS.gene015325:CDS | 40.0% | |
| TCAGTCAAGACTTTGATGGA+AGG | + | chr5.4:8030574-8030593 | MS.gene015325:CDS | 40.0% | |
| TCCACTGAAACTTGACTCAA+GGG | - | chr5.4:8029832-8029851 | None:intergenic | 40.0% | |
| TGCAAATTTGTCATCCCTTC+CGG | - | chr5.4:8030460-8030479 | None:intergenic | 40.0% | |
| TTGTTTCATAGATCCTCTGC+CGG | - | chr5.4:8030356-8030375 | None:intergenic | 40.0% | |
| ! | AATTTGGAGCAGGGATGAAT+AGG | - | chr5.4:8029860-8029879 | None:intergenic | 40.0% |
| ! | TGTTCGGTTATTTGGTGACT+CGG | - | chr5.4:8029609-8029628 | None:intergenic | 40.0% |
| !! | GTACTTTTGGACAGTGTTGA+GGG | + | chr5.4:8029327-8029346 | MS.gene015325:CDS | 40.0% |
| AAGGATTAGGAGGCAGGTTT+GGG | + | chr5.4:8030593-8030612 | MS.gene015325:CDS | 45.0% | |
| AATGTTTAAGCTTCCGGCAG+AGG | + | chr5.4:8030340-8030359 | MS.gene015325:CDS | 45.0% | |
| CAACCTTCAGAAGAGTCCTA+CGG | + | chr5.4:8030418-8030437 | MS.gene015325:CDS | 45.0% | |
| CAGGTAGCCATACAATAGGA+AGG | + | chr5.4:8030313-8030332 | MS.gene015325:intron | 45.0% | |
| CCATATGTCCTATTACCGGA+AGG | + | chr5.4:8030442-8030461 | MS.gene015325:CDS | 45.0% | |
| CCTTCCGGTAATAGGACATA+TGG | - | chr5.4:8030445-8030464 | None:intergenic | 45.0% | |
| CGGTCCATATGTCCTATTAC+CGG | + | chr5.4:8030438-8030457 | MS.gene015325:CDS | 45.0% | |
| CTCACTATCCCTTCAGCTAA+GGG | - | chr5.4:8029052-8029071 | None:intergenic | 45.0% | |
| CTCCACTGAAACTTGACTCA+AGG | - | chr5.4:8029833-8029852 | None:intergenic | 45.0% | |
| TCAGCACATGAAACAGTGAG+AGG | - | chr5.4:8029447-8029466 | None:intergenic | 45.0% | |
| TCCCTTGAGTCAAGTTTCAG+TGG | + | chr5.4:8029828-8029847 | MS.gene015325:CDS | 45.0% | |
| TCTCACTATCCCTTCAGCTA+AGG | - | chr5.4:8029053-8029072 | None:intergenic | 45.0% | |
| TCTGGATATTGAAGACCTGG+TGG | + | chr5.4:8029920-8029939 | MS.gene015325:CDS | 45.0% | |
| TGCTCGTGATGCTGTTGAAT+TGG | + | chr5.4:8029482-8029501 | MS.gene015325:CDS | 45.0% | |
| TTGCAGTTCGATGTCGAGTT+CGG | - | chr5.4:8029575-8029594 | None:intergenic | 45.0% | |
| TTGTCATCCCTTCCGGTAAT+AGG | - | chr5.4:8030453-8030472 | None:intergenic | 45.0% | |
| ! | ATATAAGGGGTGCGATGCAT+CGG | + | chr5.4:8029305-8029324 | MS.gene015325:intron | 45.0% |
| ! | GGTACTTTTGGACAGTGTTG+AGG | + | chr5.4:8029326-8029345 | MS.gene015325:CDS | 45.0% |
| !! | GTTATTTGGTGACTCGGTCA+TGG | - | chr5.4:8029603-8029622 | None:intergenic | 45.0% |
| AGGATTAGGAGGCAGGTTTG+GGG | + | chr5.4:8030594-8030613 | MS.gene015325:CDS | 50.0% | |
| GAAGAGAGGAGGACCAAGAT+GGG | + | chr5.4:8029782-8029801 | MS.gene015325:intron | 50.0% | |
| GAAGGATTAGGAGGCAGGTT+TGG | + | chr5.4:8030592-8030611 | MS.gene015325:CDS | 50.0% | |
| GGGTCTGGATATTGAAGACC+TGG | + | chr5.4:8029917-8029936 | MS.gene015325:CDS | 50.0% | |
| TGAAGAGAGGAGGACCAAGA+TGG | + | chr5.4:8029781-8029800 | MS.gene015325:intron | 50.0% | |
| TGATGGAAGGATTAGGAGGC+AGG | + | chr5.4:8030587-8030606 | MS.gene015325:CDS | 50.0% | |
| TGGAGCAGGGATGAATAGGT+TGG | - | chr5.4:8029856-8029875 | None:intergenic | 50.0% | |
| ! | GAAGACCTGGTGGTTCTATC+AGG | + | chr5.4:8029930-8029949 | MS.gene015325:CDS | 50.0% |
| !! | GTGCGATGCATCGGTACTTT+TGG | + | chr5.4:8029314-8029333 | MS.gene015325:CDS | 50.0% |
| ACCAAGATGGGATGTGTGGC+TGG | + | chr5.4:8029794-8029813 | MS.gene015325:CDS | 55.0% | |
| AGTAGCGACGCTGCTATACG+TGG | - | chr5.4:8029106-8029125 | None:intergenic | 55.0% | |
| CAAGATGGGATGTGTGGCTG+GGG | + | chr5.4:8029796-8029815 | MS.gene015325:CDS | 55.0% | |
| CCAAGATGGGATGTGTGGCT+GGG | + | chr5.4:8029795-8029814 | MS.gene015325:CDS | 55.0% | |
| CCACTTGCGCTAGACCTACA+CGG | + | chr5.4:8029216-8029235 | MS.gene015325:intron | 55.0% | |
| GAGGACCAAGATGGGATGTG+TGG | + | chr5.4:8029790-8029809 | MS.gene015325:CDS | 55.0% | |
| GGACCGTAGGACTCTTCTGA+AGG | - | chr5.4:8030424-8030443 | None:intergenic | 55.0% | |
| GTAGGTCTAGCGCAAGTGGT+TGG | - | chr5.4:8029215-8029234 | None:intergenic | 55.0% | |
| CCCAGCCACACATCCCATCT+TGG | - | chr5.4:8029798-8029817 | None:intergenic | 60.0% | |
| CCGTGTAGGTCTAGCGCAAG+TGG | - | chr5.4:8029219-8029238 | None:intergenic | 60.0% | |
| GATGGGATGTGTGGCTGGGG+AGG | + | chr5.4:8029799-8029818 | MS.gene015325:CDS | 65.0% | |
| GGATGTGTGGCTGGGGAGGA+AGG | + | chr5.4:8029803-8029822 | MS.gene015325:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 8028944 | 8030743 | 8028944 | ID=MS.gene015325 |
| chr5.4 | mRNA | 8028944 | 8030743 | 8028944 | ID=MS.gene015325.t1;Parent=MS.gene015325 |
| chr5.4 | exon | 8028944 | 8029156 | 8028944 | ID=MS.gene015325.t1.exon1;Parent=MS.gene015325.t1 |
| chr5.4 | CDS | 8028944 | 8029156 | 8028944 | ID=cds.MS.gene015325.t1;Parent=MS.gene015325.t1 |
| chr5.4 | exon | 8029312 | 8029503 | 8029312 | ID=MS.gene015325.t1.exon2;Parent=MS.gene015325.t1 |
| chr5.4 | CDS | 8029312 | 8029503 | 8029312 | ID=cds.MS.gene015325.t1;Parent=MS.gene015325.t1 |
| chr5.4 | exon | 8029786 | 8029951 | 8029786 | ID=MS.gene015325.t1.exon3;Parent=MS.gene015325.t1 |
| chr5.4 | CDS | 8029786 | 8029951 | 8029786 | ID=cds.MS.gene015325.t1;Parent=MS.gene015325.t1 |
| chr5.4 | exon | 8030316 | 8030743 | 8030316 | ID=MS.gene015325.t1.exon4;Parent=MS.gene015325.t1 |
| chr5.4 | CDS | 8030316 | 8030743 | 8030316 | ID=cds.MS.gene015325.t1;Parent=MS.gene015325.t1 |
| Gene Sequence |
| Protein sequence |
