Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21483.t1 | XP_003611449.1 | 94 | 332 | 20 | 0 | 1 | 332 | 1 | 332 | 1.30E-181 | 645.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21483.t1 | Q9SLH7 | 64.6 | 325 | 114 | 1 | 7 | 331 | 12 | 335 | 7.0e-120 | 431.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21483.t1 | G7JZV3 | 94.0 | 332 | 20 | 0 | 1 | 332 | 1 | 332 | 9.2e-182 | 645.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene059685 | MS.gene21483 | 0.827246 | 1.74E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene074595 | MS.gene21483 | PPI |
| MS.gene21483 | MS.gene047885 | PPI |
| MS.gene64708 | MS.gene21483 | PPI |
| MS.gene21483 | MS.gene78768 | PPI |
| MS.gene068826 | MS.gene21483 | PPI |
| MS.gene012048 | MS.gene21483 | PPI |
| MS.gene012047 | MS.gene21483 | PPI |
| MS.gene21483 | MS.gene76444 | PPI |
| MS.gene21483 | MS.gene047884 | PPI |
| MS.gene068822 | MS.gene21483 | PPI |
| MS.gene061253 | MS.gene21483 | PPI |
| MS.gene26846 | MS.gene21483 | PPI |
| MS.gene010565 | MS.gene21483 | PPI |
| MS.gene02412 | MS.gene21483 | PPI |
| MS.gene21483 | MS.gene068824 | PPI |
| MS.gene21483 | MS.gene59415 | PPI |
| MS.gene030103 | MS.gene21483 | PPI |
| MS.gene21483 | MS.gene89609 | PPI |
| MS.gene053958 | MS.gene21483 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21483.t1 | MTR_5g014100 | 93.976 | 332 | 20 | 0 | 1 | 332 | 1 | 332 | 0.0 | 633 |
| MS.gene21483.t1 | MTR_8g076820 | 54.459 | 314 | 137 | 3 | 18 | 331 | 23 | 330 | 4.13e-114 | 334 |
| MS.gene21483.t1 | MTR_5g021060 | 53.398 | 309 | 137 | 3 | 24 | 331 | 28 | 330 | 4.44e-112 | 328 |
| MS.gene21483.t1 | MTR_4g122640 | 49.673 | 306 | 147 | 2 | 26 | 331 | 38 | 336 | 6.66e-101 | 300 |
| MS.gene21483.t1 | MTR_1g022970 | 51.307 | 306 | 145 | 2 | 26 | 331 | 46 | 347 | 2.06e-100 | 300 |
| MS.gene21483.t1 | MTR_3g072190 | 47.432 | 331 | 161 | 3 | 1 | 331 | 1 | 318 | 6.33e-98 | 292 |
| MS.gene21483.t1 | MTR_3g094650 | 49.836 | 305 | 138 | 4 | 26 | 328 | 28 | 319 | 6.98e-98 | 292 |
| MS.gene21483.t1 | MTR_5g083860 | 48.624 | 327 | 153 | 4 | 7 | 331 | 12 | 325 | 2.41e-97 | 291 |
| MS.gene21483.t1 | MTR_7g072510 | 47.896 | 309 | 148 | 3 | 23 | 331 | 17 | 312 | 5.71e-97 | 290 |
| MS.gene21483.t1 | MTR_2g084080 | 45.619 | 331 | 166 | 4 | 1 | 331 | 1 | 317 | 1.77e-96 | 288 |
| MS.gene21483.t1 | MTR_3g466200 | 49.359 | 312 | 142 | 6 | 23 | 331 | 22 | 320 | 2.85e-96 | 288 |
| MS.gene21483.t1 | MTR_5g049280 | 48.232 | 311 | 150 | 4 | 26 | 331 | 33 | 337 | 5.49e-96 | 288 |
| MS.gene21483.t1 | MTR_4g029170 | 50.000 | 308 | 139 | 4 | 26 | 331 | 27 | 321 | 2.33e-95 | 286 |
| MS.gene21483.t1 | MTR_2g029560 | 47.419 | 310 | 159 | 2 | 22 | 331 | 20 | 325 | 1.13e-94 | 285 |
| MS.gene21483.t1 | MTR_2g084110 | 45.619 | 331 | 166 | 5 | 1 | 331 | 1 | 317 | 2.60e-94 | 283 |
| MS.gene21483.t1 | MTR_2g084020 | 45.808 | 334 | 162 | 6 | 1 | 331 | 1 | 318 | 3.13e-94 | 283 |
| MS.gene21483.t1 | MTR_7g072480 | 48.867 | 309 | 145 | 3 | 23 | 331 | 21 | 316 | 4.07e-94 | 282 |
| MS.gene21483.t1 | MTR_2g040000 | 49.673 | 306 | 143 | 5 | 30 | 331 | 33 | 331 | 5.65e-93 | 280 |
| MS.gene21483.t1 | MTR_2g084010 | 45.317 | 331 | 168 | 4 | 1 | 331 | 1 | 318 | 5.83e-93 | 280 |
| MS.gene21483.t1 | MTR_4g125940 | 47.883 | 307 | 154 | 3 | 26 | 331 | 28 | 329 | 7.43e-93 | 280 |
| MS.gene21483.t1 | MTR_3g094670 | 49.026 | 308 | 142 | 4 | 26 | 331 | 28 | 322 | 7.72e-92 | 277 |
| MS.gene21483.t1 | MTR_4g029190 | 47.188 | 320 | 158 | 3 | 12 | 331 | 32 | 340 | 8.20e-92 | 277 |
| MS.gene21483.t1 | MTR_4g029180 | 48.525 | 305 | 142 | 5 | 29 | 331 | 30 | 321 | 1.57e-91 | 276 |
| MS.gene21483.t1 | MTR_7g093370 | 46.906 | 307 | 158 | 3 | 26 | 331 | 69 | 371 | 1.80e-91 | 278 |
| MS.gene21483.t1 | MTR_2g029730 | 47.302 | 315 | 160 | 3 | 17 | 331 | 18 | 326 | 3.73e-91 | 276 |
| MS.gene21483.t1 | MTR_1g115900 | 46.626 | 326 | 156 | 6 | 8 | 331 | 12 | 321 | 6.45e-91 | 275 |
| MS.gene21483.t1 | MTR_2g084090 | 45.846 | 325 | 160 | 5 | 10 | 331 | 7 | 318 | 9.03e-91 | 274 |
| MS.gene21483.t1 | MTR_2g029800 | 47.351 | 302 | 155 | 2 | 30 | 331 | 33 | 330 | 1.53e-90 | 275 |
| MS.gene21483.t1 | MTR_2g029850 | 47.059 | 306 | 158 | 2 | 26 | 331 | 29 | 330 | 2.78e-90 | 274 |
| MS.gene21483.t1 | MTR_4g029200 | 45.794 | 321 | 159 | 4 | 12 | 331 | 32 | 338 | 4.28e-90 | 273 |
| MS.gene21483.t1 | MTR_1g054205 | 46.205 | 303 | 158 | 3 | 30 | 331 | 28 | 326 | 8.03e-90 | 272 |
| MS.gene21483.t1 | MTR_3g094630 | 47.024 | 336 | 159 | 7 | 1 | 331 | 1 | 322 | 2.72e-89 | 270 |
| MS.gene21483.t1 | MTR_4g083710 | 45.317 | 331 | 166 | 5 | 4 | 331 | 6 | 324 | 4.11e-89 | 270 |
| MS.gene21483.t1 | MTR_2g029815 | 44.109 | 331 | 181 | 2 | 1 | 331 | 4 | 330 | 7.12e-89 | 270 |
| MS.gene21483.t1 | MTR_5g074970 | 48.710 | 310 | 142 | 5 | 26 | 331 | 30 | 326 | 1.48e-88 | 268 |
| MS.gene21483.t1 | MTR_5g074860 | 44.940 | 336 | 162 | 8 | 2 | 330 | 5 | 324 | 3.52e-88 | 268 |
| MS.gene21483.t1 | MTR_2g029820 | 46.689 | 302 | 157 | 2 | 30 | 331 | 33 | 330 | 9.99e-88 | 267 |
| MS.gene21483.t1 | MTR_4g125940 | 49.281 | 278 | 135 | 3 | 55 | 331 | 2 | 274 | 4.08e-87 | 263 |
| MS.gene21483.t1 | MTR_3g466180 | 47.095 | 327 | 153 | 4 | 6 | 331 | 16 | 323 | 5.74e-87 | 265 |
| MS.gene21483.t1 | MTR_2g029830 | 46.254 | 307 | 159 | 4 | 26 | 331 | 28 | 329 | 6.66e-87 | 265 |
| MS.gene21483.t1 | MTR_2g029860 | 46.026 | 302 | 159 | 2 | 30 | 331 | 33 | 330 | 7.69e-87 | 265 |
| MS.gene21483.t1 | MTR_2g084000 | 43.202 | 331 | 176 | 4 | 1 | 331 | 1 | 319 | 1.84e-86 | 263 |
| MS.gene21483.t1 | MTR_2g029750 | 45.338 | 311 | 156 | 3 | 26 | 331 | 29 | 330 | 7.08e-86 | 263 |
| MS.gene21483.t1 | MTR_7g026990 | 45.538 | 325 | 162 | 5 | 7 | 331 | 13 | 322 | 2.40e-85 | 260 |
| MS.gene21483.t1 | MTR_2g029910 | 45.724 | 304 | 160 | 3 | 29 | 331 | 33 | 332 | 3.93e-85 | 261 |
| MS.gene21483.t1 | MTR_5g074760 | 46.602 | 309 | 150 | 6 | 26 | 331 | 25 | 321 | 7.58e-85 | 259 |
| MS.gene21483.t1 | MTR_5g074710 | 47.097 | 310 | 147 | 7 | 26 | 331 | 25 | 321 | 8.36e-85 | 259 |
| MS.gene21483.t1 | MTR_5g017850 | 45.277 | 307 | 160 | 4 | 26 | 331 | 27 | 326 | 2.46e-84 | 258 |
| MS.gene21483.t1 | MTR_2g028980 | 43.413 | 334 | 182 | 3 | 1 | 331 | 1 | 330 | 4.78e-84 | 258 |
| MS.gene21483.t1 | MTR_2g029740 | 45.455 | 308 | 152 | 5 | 30 | 331 | 33 | 330 | 1.03e-83 | 257 |
| MS.gene21483.t1 | MTR_4g074995 | 45.752 | 306 | 145 | 3 | 26 | 331 | 24 | 308 | 1.43e-83 | 255 |
| MS.gene21483.t1 | MTR_0155s0040 | 40.964 | 332 | 171 | 7 | 4 | 331 | 5 | 315 | 4.10e-83 | 254 |
| MS.gene21483.t1 | MTR_5g074740 | 46.278 | 309 | 151 | 6 | 26 | 331 | 25 | 321 | 8.48e-83 | 254 |
| MS.gene21483.t1 | MTR_5g017860 | 45.603 | 307 | 159 | 4 | 26 | 331 | 27 | 326 | 1.01e-82 | 254 |
| MS.gene21483.t1 | MTR_4g074990 | 44.013 | 309 | 143 | 3 | 26 | 331 | 24 | 305 | 1.22e-81 | 250 |
| MS.gene21483.t1 | MTR_4g030890 | 44.371 | 302 | 159 | 4 | 30 | 331 | 104 | 396 | 3.92e-81 | 253 |
| MS.gene21483.t1 | MTR_1g086320 | 42.643 | 333 | 179 | 5 | 4 | 331 | 8 | 333 | 2.38e-80 | 248 |
| MS.gene21483.t1 | MTR_1g086490 | 41.888 | 339 | 180 | 4 | 4 | 331 | 8 | 340 | 5.04e-80 | 247 |
| MS.gene21483.t1 | MTR_3g467600 | 42.638 | 326 | 173 | 5 | 9 | 331 | 10 | 324 | 8.98e-80 | 246 |
| MS.gene21483.t1 | MTR_3g072190 | 48.669 | 263 | 122 | 3 | 69 | 331 | 2 | 251 | 4.76e-79 | 241 |
| MS.gene21483.t1 | MTR_4g031140 | 43.421 | 304 | 159 | 5 | 30 | 331 | 32 | 324 | 1.80e-78 | 243 |
| MS.gene21483.t1 | MTR_5g022870 | 41.088 | 331 | 180 | 7 | 1 | 331 | 1 | 316 | 5.98e-77 | 238 |
| MS.gene21483.t1 | MTR_1g101830 | 41.867 | 332 | 176 | 9 | 3 | 331 | 5 | 322 | 6.44e-77 | 239 |
| MS.gene21483.t1 | MTR_4g046713 | 41.104 | 326 | 181 | 5 | 6 | 331 | 12 | 326 | 2.31e-76 | 237 |
| MS.gene21483.t1 | MTR_1g077000 | 40.785 | 331 | 179 | 6 | 1 | 331 | 14 | 327 | 3.37e-76 | 237 |
| MS.gene21483.t1 | MTR_3g092990 | 41.194 | 335 | 184 | 6 | 1 | 331 | 1 | 326 | 5.37e-75 | 234 |
| MS.gene21483.t1 | MTR_2g088770 | 40.798 | 326 | 180 | 6 | 7 | 331 | 12 | 325 | 1.85e-74 | 233 |
| MS.gene21483.t1 | MTR_8g075100 | 42.671 | 307 | 162 | 7 | 26 | 331 | 26 | 319 | 2.18e-74 | 232 |
| MS.gene21483.t1 | MTR_4g133800 | 44.884 | 303 | 152 | 7 | 30 | 331 | 45 | 333 | 3.33e-73 | 229 |
| MS.gene21483.t1 | MTR_7g107520 | 41.830 | 306 | 168 | 4 | 26 | 331 | 25 | 320 | 1.72e-72 | 227 |
| MS.gene21483.t1 | MTR_4g074980 | 40.367 | 327 | 159 | 5 | 5 | 331 | 4 | 294 | 6.87e-72 | 225 |
| MS.gene21483.t1 | MTR_4g074980 | 44.922 | 256 | 135 | 1 | 5 | 260 | 4 | 253 | 2.00e-71 | 222 |
| MS.gene21483.t1 | MTR_4g114210 | 43.396 | 318 | 164 | 7 | 19 | 331 | 14 | 320 | 5.21e-71 | 223 |
| MS.gene21483.t1 | MTR_7g086870 | 40.066 | 302 | 165 | 5 | 30 | 331 | 26 | 311 | 5.38e-71 | 223 |
| MS.gene21483.t1 | MTR_2g029830 | 45.385 | 260 | 138 | 2 | 72 | 331 | 6 | 261 | 9.14e-71 | 222 |
| MS.gene21483.t1 | MTR_1g038680 | 42.157 | 306 | 167 | 6 | 30 | 331 | 33 | 332 | 1.24e-69 | 220 |
| MS.gene21483.t1 | MTR_2g437770 | 43.831 | 308 | 157 | 9 | 25 | 331 | 49 | 341 | 2.59e-69 | 220 |
| MS.gene21483.t1 | MTR_4g132490 | 36.970 | 330 | 199 | 6 | 3 | 331 | 6 | 327 | 3.74e-69 | 219 |
| MS.gene21483.t1 | MTR_6g027440 | 41.391 | 302 | 165 | 6 | 30 | 331 | 25 | 314 | 7.82e-69 | 218 |
| MS.gene21483.t1 | MTR_7g086820 | 40.066 | 302 | 168 | 5 | 30 | 331 | 24 | 312 | 2.07e-68 | 217 |
| MS.gene21483.t1 | MTR_1g025980 | 40.000 | 325 | 180 | 9 | 7 | 330 | 7 | 317 | 4.96e-68 | 216 |
| MS.gene21483.t1 | MTR_2g008710 | 39.939 | 328 | 184 | 6 | 7 | 331 | 8 | 325 | 5.12e-68 | 216 |
| MS.gene21483.t1 | MTR_2g099175 | 39.286 | 336 | 182 | 7 | 7 | 331 | 11 | 335 | 1.06e-67 | 216 |
| MS.gene21483.t1 | MTR_7g029030 | 37.349 | 332 | 195 | 5 | 1 | 331 | 1 | 320 | 3.74e-67 | 214 |
| MS.gene21483.t1 | MTR_5g074860 | 37.798 | 336 | 147 | 7 | 2 | 330 | 5 | 285 | 1.45e-65 | 208 |
| MS.gene21483.t1 | MTR_1g090760 | 36.890 | 328 | 197 | 6 | 3 | 327 | 6 | 326 | 3.24e-65 | 209 |
| MS.gene21483.t1 | MTR_4g087965 | 40.127 | 314 | 177 | 6 | 19 | 327 | 35 | 342 | 5.28e-65 | 209 |
| MS.gene21483.t1 | MTR_6g043460 | 37.037 | 324 | 184 | 7 | 6 | 327 | 19 | 324 | 5.63e-64 | 206 |
| MS.gene21483.t1 | MTR_8g062780 | 37.898 | 314 | 175 | 5 | 26 | 331 | 23 | 324 | 7.25e-64 | 205 |
| MS.gene21483.t1 | MTR_3g105790 | 38.671 | 331 | 194 | 5 | 1 | 331 | 1 | 322 | 7.39e-64 | 205 |
| MS.gene21483.t1 | MTR_1g066380 | 37.500 | 312 | 179 | 5 | 23 | 331 | 25 | 323 | 1.04e-63 | 205 |
| MS.gene21483.t1 | MTR_3g092990 | 39.104 | 335 | 180 | 7 | 1 | 331 | 1 | 315 | 1.29e-63 | 204 |
| MS.gene21483.t1 | MTR_0286s0010 | 38.065 | 310 | 179 | 6 | 26 | 331 | 34 | 334 | 2.04e-63 | 204 |
| MS.gene21483.t1 | MTR_6g008075 | 38.065 | 310 | 179 | 6 | 26 | 331 | 34 | 334 | 2.04e-63 | 204 |
| MS.gene21483.t1 | MTR_6g043280 | 37.217 | 309 | 174 | 6 | 26 | 331 | 41 | 332 | 4.76e-63 | 203 |
| MS.gene21483.t1 | MTR_1g066710 | 36.102 | 313 | 185 | 4 | 22 | 331 | 23 | 323 | 5.26e-62 | 201 |
| MS.gene21483.t1 | MTR_6g043240 | 36.688 | 308 | 175 | 6 | 26 | 331 | 42 | 331 | 2.37e-61 | 199 |
| MS.gene21483.t1 | MTR_1g066640 | 36.102 | 313 | 185 | 5 | 22 | 331 | 23 | 323 | 4.51e-61 | 198 |
| MS.gene21483.t1 | MTR_1g009750 | 37.500 | 328 | 189 | 8 | 8 | 331 | 13 | 328 | 1.12e-60 | 197 |
| MS.gene21483.t1 | MTR_5g016010 | 35.629 | 334 | 205 | 5 | 1 | 330 | 1 | 328 | 3.24e-60 | 196 |
| MS.gene21483.t1 | MTR_4g127670 | 38.689 | 305 | 175 | 6 | 26 | 327 | 24 | 319 | 8.61e-60 | 195 |
| MS.gene21483.t1 | MTR_2g067440 | 35.000 | 340 | 181 | 9 | 19 | 327 | 53 | 383 | 1.82e-57 | 191 |
| MS.gene21483.t1 | MTR_2g078610 | 34.706 | 340 | 183 | 7 | 20 | 327 | 70 | 402 | 3.36e-57 | 191 |
| MS.gene21483.t1 | MTR_1g066680 | 35.463 | 313 | 186 | 6 | 22 | 331 | 23 | 322 | 1.79e-56 | 186 |
| MS.gene21483.t1 | MTR_2g077990 | 34.706 | 340 | 183 | 7 | 20 | 327 | 70 | 402 | 8.77e-56 | 187 |
| MS.gene21483.t1 | MTR_2g008160 | 38.924 | 316 | 180 | 8 | 20 | 331 | 17 | 323 | 2.97e-55 | 183 |
| MS.gene21483.t1 | MTR_5g033470 | 38.854 | 314 | 175 | 10 | 26 | 331 | 73 | 377 | 9.14e-55 | 183 |
| MS.gene21483.t1 | MTR_4g095450 | 37.255 | 306 | 176 | 7 | 26 | 327 | 27 | 320 | 1.63e-54 | 181 |
| MS.gene21483.t1 | MTR_4g132110 | 35.484 | 310 | 183 | 6 | 26 | 331 | 32 | 328 | 2.52e-53 | 178 |
| MS.gene21483.t1 | MTR_1g066380 | 36.604 | 265 | 153 | 4 | 70 | 331 | 3 | 255 | 4.78e-53 | 175 |
| MS.gene21483.t1 | MTR_4g132110 | 35.556 | 315 | 181 | 8 | 26 | 331 | 32 | 333 | 1.48e-51 | 174 |
| MS.gene21483.t1 | MTR_2g078280 | 34.545 | 330 | 177 | 7 | 20 | 317 | 70 | 392 | 3.59e-51 | 174 |
| MS.gene21483.t1 | MTR_3g072210 | 46.939 | 196 | 91 | 4 | 137 | 331 | 55 | 238 | 2.77e-49 | 165 |
| MS.gene21483.t1 | MTR_2g008730 | 34.139 | 331 | 180 | 7 | 4 | 331 | 6 | 301 | 2.24e-48 | 164 |
| MS.gene21483.t1 | MTR_1g009750 | 34.356 | 326 | 185 | 9 | 8 | 331 | 13 | 311 | 2.27e-48 | 165 |
| MS.gene21483.t1 | MTR_2g067450 | 34.185 | 313 | 196 | 5 | 20 | 330 | 5 | 309 | 2.37e-47 | 162 |
| MS.gene21483.t1 | MTR_5g074700 | 40.833 | 240 | 113 | 7 | 95 | 331 | 1 | 214 | 1.79e-46 | 157 |
| MS.gene21483.t1 | MTR_0147s0010 | 33.841 | 328 | 173 | 6 | 25 | 330 | 76 | 381 | 1.84e-45 | 159 |
| MS.gene21483.t1 | MTR_2g008160 | 35.443 | 316 | 156 | 7 | 20 | 331 | 17 | 288 | 8.37e-44 | 152 |
| MS.gene21483.t1 | MTR_7g072490 | 39.370 | 254 | 87 | 3 | 71 | 324 | 1 | 187 | 2.15e-43 | 149 |
| MS.gene21483.t1 | MTR_3g105790 | 38.400 | 250 | 149 | 3 | 82 | 331 | 2 | 246 | 4.19e-43 | 149 |
| MS.gene21483.t1 | MTR_2g029880 | 42.784 | 194 | 97 | 4 | 138 | 331 | 9 | 188 | 1.10e-39 | 139 |
| MS.gene21483.t1 | MTR_2g008160 | 44.571 | 175 | 92 | 4 | 22 | 195 | 19 | 189 | 1.13e-37 | 134 |
| MS.gene21483.t1 | MTR_3g072260 | 51.128 | 133 | 65 | 0 | 1 | 133 | 1 | 133 | 6.82e-37 | 129 |
| MS.gene21483.t1 | MTR_3g462850 | 39.241 | 158 | 63 | 5 | 190 | 331 | 9 | 149 | 1.00e-25 | 100 |
| MS.gene21483.t1 | MTR_7g086790 | 41.667 | 120 | 66 | 2 | 73 | 192 | 17 | 132 | 1.63e-23 | 96.3 |
| MS.gene21483.t1 | MTR_1g089005 | 43.333 | 120 | 61 | 2 | 25 | 138 | 14 | 132 | 7.10e-22 | 90.9 |
| MS.gene21483.t1 | MTR_2g077980 | 28.231 | 294 | 162 | 12 | 78 | 331 | 1 | 285 | 2.86e-21 | 92.4 |
| MS.gene21483.t1 | MTR_4g114220 | 55.952 | 84 | 27 | 2 | 52 | 135 | 29 | 102 | 9.35e-21 | 87.4 |
| MS.gene21483.t1 | MTR_6g048160 | 61.972 | 71 | 23 | 2 | 65 | 135 | 22 | 88 | 1.89e-20 | 84.7 |
| MS.gene21483.t1 | MTR_7g086785 | 35.766 | 137 | 81 | 3 | 72 | 205 | 4 | 136 | 3.44e-18 | 80.1 |
| MS.gene21483.t1 | MTR_1g098320 | 41.463 | 82 | 45 | 1 | 250 | 331 | 46 | 124 | 3.18e-17 | 77.8 |
| MS.gene21483.t1 | MTR_4g012865 | 47.826 | 69 | 36 | 0 | 25 | 93 | 76 | 144 | 1.87e-16 | 75.9 |
| MS.gene21483.t1 | MTR_5g058120 | 30.723 | 166 | 98 | 4 | 162 | 327 | 7 | 155 | 3.12e-16 | 77.4 |
| MS.gene21483.t1 | MTR_4g031040 | 34.831 | 178 | 69 | 5 | 85 | 262 | 1 | 131 | 3.64e-16 | 74.7 |
| MS.gene21483.t1 | MTR_2g029930 | 36.207 | 116 | 45 | 4 | 7 | 108 | 1 | 101 | 4.00e-15 | 70.9 |
| MS.gene21483.t1 | MTR_3g107060 | 27.106 | 273 | 123 | 8 | 57 | 315 | 105 | 315 | 1.30e-14 | 73.9 |
| MS.gene21483.t1 | MTR_7g086810 | 34.513 | 113 | 48 | 1 | 31 | 143 | 11 | 97 | 3.82e-13 | 68.6 |
| MS.gene21483.t1 | MTR_7g107500 | 37.931 | 87 | 50 | 1 | 245 | 331 | 15 | 97 | 9.80e-13 | 63.9 |
| MS.gene21483.t1 | MTR_5g074770 | 39.785 | 93 | 48 | 3 | 241 | 330 | 21 | 108 | 6.75e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21483.t1 | AT2G35380 | 64.615 | 325 | 114 | 1 | 7 | 331 | 12 | 335 | 2.48e-155 | 439 |
| MS.gene21483.t1 | AT2G35380 | 66.397 | 247 | 83 | 0 | 85 | 331 | 1 | 247 | 5.50e-121 | 348 |
| MS.gene21483.t1 | AT5G66390 | 53.268 | 306 | 138 | 2 | 26 | 331 | 33 | 333 | 8.55e-111 | 326 |
| MS.gene21483.t1 | AT3G50990 | 52.614 | 306 | 140 | 3 | 26 | 331 | 41 | 341 | 5.64e-110 | 324 |
| MS.gene21483.t1 | AT2G18150 | 51.634 | 306 | 143 | 2 | 26 | 331 | 36 | 336 | 1.39e-106 | 315 |
| MS.gene21483.t1 | AT1G44970 | 52.941 | 306 | 140 | 3 | 26 | 331 | 45 | 346 | 9.96e-106 | 313 |
| MS.gene21483.t1 | AT4G36430 | 51.634 | 306 | 143 | 2 | 26 | 331 | 30 | 330 | 1.90e-104 | 309 |
| MS.gene21483.t1 | AT4G16270 | 50.809 | 309 | 141 | 5 | 26 | 331 | 48 | 348 | 4.12e-101 | 301 |
| MS.gene21483.t1 | AT2G18140 | 49.346 | 306 | 150 | 2 | 26 | 331 | 35 | 335 | 5.51e-100 | 298 |
| MS.gene21483.t1 | AT5G06720 | 46.319 | 326 | 170 | 3 | 6 | 331 | 13 | 333 | 4.96e-99 | 296 |
| MS.gene21483.t1 | AT1G68850 | 43.695 | 341 | 172 | 6 | 4 | 331 | 2 | 335 | 2.53e-93 | 281 |
| MS.gene21483.t1 | AT5G06730 | 43.252 | 326 | 180 | 3 | 6 | 331 | 14 | 334 | 4.11e-93 | 281 |
| MS.gene21483.t1 | AT5G58390 | 48.024 | 329 | 151 | 6 | 6 | 331 | 5 | 316 | 3.84e-92 | 277 |
| MS.gene21483.t1 | AT3G32980 | 45.253 | 316 | 169 | 2 | 17 | 331 | 22 | 334 | 2.54e-91 | 276 |
| MS.gene21483.t1 | AT5G19890 | 46.154 | 325 | 164 | 6 | 9 | 331 | 12 | 327 | 2.58e-91 | 276 |
| MS.gene21483.t1 | AT5G58400 | 47.416 | 329 | 153 | 7 | 6 | 331 | 14 | 325 | 3.01e-91 | 275 |
| MS.gene21483.t1 | AT2G38390 | 46.429 | 308 | 160 | 3 | 26 | 332 | 31 | 334 | 3.15e-89 | 271 |
| MS.gene21483.t1 | AT5G05340 | 46.104 | 308 | 151 | 5 | 26 | 331 | 30 | 324 | 3.94e-88 | 268 |
| MS.gene21483.t1 | AT3G49120 | 43.671 | 316 | 174 | 2 | 17 | 331 | 23 | 335 | 6.04e-88 | 268 |
| MS.gene21483.t1 | AT1G49570 | 46.557 | 305 | 158 | 3 | 26 | 329 | 48 | 348 | 1.90e-87 | 266 |
| MS.gene21483.t1 | AT3G49110 | 44.951 | 307 | 165 | 2 | 26 | 331 | 33 | 336 | 4.38e-87 | 266 |
| MS.gene21483.t1 | AT1G14550 | 42.296 | 331 | 173 | 6 | 4 | 331 | 6 | 321 | 7.01e-86 | 261 |
| MS.gene21483.t1 | AT2G38380 | 46.230 | 305 | 159 | 3 | 29 | 332 | 34 | 334 | 9.50e-86 | 262 |
| MS.gene21483.t1 | AT2G22420 | 43.598 | 328 | 170 | 5 | 4 | 331 | 7 | 319 | 1.48e-85 | 261 |
| MS.gene21483.t1 | AT4G08780 | 44.625 | 307 | 166 | 2 | 26 | 331 | 24 | 327 | 2.04e-85 | 261 |
| MS.gene21483.t1 | AT4G08770 | 45.277 | 307 | 164 | 2 | 26 | 331 | 24 | 327 | 1.94e-84 | 259 |
| MS.gene21483.t1 | AT1G14540 | 43.709 | 302 | 159 | 3 | 30 | 331 | 25 | 315 | 9.93e-84 | 256 |
| MS.gene21483.t1 | AT5G19880 | 44.277 | 332 | 172 | 5 | 3 | 331 | 8 | 329 | 3.03e-79 | 245 |
| MS.gene21483.t1 | AT3G03670 | 45.307 | 309 | 156 | 6 | 26 | 331 | 23 | 321 | 2.16e-78 | 243 |
| MS.gene21483.t1 | AT5G51890 | 42.249 | 329 | 172 | 10 | 8 | 331 | 7 | 322 | 9.25e-76 | 236 |
| MS.gene21483.t1 | AT2G41480 | 43.333 | 330 | 170 | 8 | 7 | 331 | 11 | 328 | 3.13e-74 | 232 |
| MS.gene21483.t1 | AT1G05260 | 42.020 | 307 | 170 | 5 | 26 | 331 | 26 | 325 | 6.92e-74 | 231 |
| MS.gene21483.t1 | AT5G64120 | 44.040 | 302 | 157 | 5 | 30 | 331 | 39 | 328 | 4.66e-73 | 229 |
| MS.gene21483.t1 | AT5G17820 | 42.384 | 302 | 158 | 6 | 30 | 331 | 28 | 313 | 1.40e-72 | 227 |
| MS.gene21483.t1 | AT4G33420 | 40.549 | 328 | 175 | 7 | 4 | 331 | 18 | 325 | 1.70e-72 | 228 |
| MS.gene21483.t1 | AT3G21770 | 40.385 | 312 | 179 | 5 | 17 | 327 | 19 | 324 | 2.48e-72 | 227 |
| MS.gene21483.t1 | AT4G33420 | 40.549 | 328 | 175 | 7 | 4 | 331 | 65 | 372 | 5.06e-72 | 228 |
| MS.gene21483.t1 | AT1G05240 | 41.801 | 311 | 169 | 6 | 24 | 331 | 24 | 325 | 3.73e-71 | 224 |
| MS.gene21483.t1 | AT1G05250 | 41.801 | 311 | 169 | 6 | 24 | 331 | 24 | 325 | 3.73e-71 | 224 |
| MS.gene21483.t1 | AT5G17820 | 42.384 | 302 | 158 | 6 | 30 | 331 | 81 | 366 | 5.26e-71 | 225 |
| MS.gene21483.t1 | AT5G15180 | 41.914 | 303 | 166 | 6 | 30 | 331 | 36 | 329 | 5.43e-71 | 224 |
| MS.gene21483.t1 | AT1G71695 | 40.656 | 305 | 165 | 6 | 26 | 327 | 44 | 335 | 1.19e-70 | 224 |
| MS.gene21483.t1 | AT4G11290 | 38.739 | 333 | 195 | 6 | 1 | 331 | 1 | 326 | 2.80e-70 | 222 |
| MS.gene21483.t1 | AT5G42180 | 41.159 | 328 | 175 | 7 | 4 | 330 | 6 | 316 | 8.98e-69 | 218 |
| MS.gene21483.t1 | AT2G39040 | 42.540 | 315 | 162 | 8 | 26 | 331 | 46 | 350 | 2.33e-68 | 218 |
| MS.gene21483.t1 | AT4G26010 | 41.914 | 303 | 156 | 6 | 30 | 331 | 26 | 309 | 3.03e-68 | 216 |
| MS.gene21483.t1 | AT5G47000 | 38.024 | 334 | 191 | 6 | 1 | 331 | 10 | 330 | 6.73e-68 | 216 |
| MS.gene21483.t1 | AT4G26010 | 41.914 | 303 | 156 | 6 | 30 | 331 | 54 | 337 | 7.39e-68 | 216 |
| MS.gene21483.t1 | AT4G31760 | 39.692 | 325 | 186 | 5 | 7 | 331 | 12 | 326 | 8.59e-68 | 215 |
| MS.gene21483.t1 | AT5G39580 | 41.867 | 332 | 179 | 8 | 1 | 331 | 1 | 319 | 8.88e-68 | 215 |
| MS.gene21483.t1 | AT5G64110 | 41.141 | 333 | 185 | 5 | 1 | 331 | 7 | 330 | 2.31e-67 | 214 |
| MS.gene21483.t1 | AT3G28200 | 37.987 | 308 | 177 | 4 | 26 | 331 | 21 | 316 | 1.72e-66 | 212 |
| MS.gene21483.t1 | AT3G01190 | 40.061 | 327 | 178 | 8 | 6 | 331 | 12 | 321 | 4.51e-66 | 211 |
| MS.gene21483.t1 | AT5G40150 | 38.961 | 308 | 175 | 5 | 26 | 331 | 32 | 328 | 2.49e-65 | 209 |
| MS.gene21483.t1 | AT1G34510 | 41.042 | 307 | 161 | 6 | 26 | 331 | 22 | 309 | 4.74e-65 | 208 |
| MS.gene21483.t1 | AT4G17690 | 40.000 | 310 | 169 | 6 | 26 | 331 | 26 | 322 | 4.99e-65 | 208 |
| MS.gene21483.t1 | AT1G24110 | 40.000 | 305 | 172 | 6 | 26 | 327 | 22 | 318 | 5.44e-65 | 208 |
| MS.gene21483.t1 | AT4G37530 | 39.744 | 312 | 179 | 4 | 23 | 331 | 24 | 329 | 9.94e-65 | 207 |
| MS.gene21483.t1 | AT4G37520 | 39.482 | 309 | 178 | 4 | 26 | 331 | 27 | 329 | 1.90e-64 | 207 |
| MS.gene21483.t1 | AT2G34060 | 41.100 | 309 | 169 | 7 | 26 | 328 | 42 | 343 | 2.92e-63 | 204 |
| MS.gene21483.t1 | AT2G18980 | 40.645 | 310 | 169 | 6 | 26 | 331 | 25 | 323 | 7.36e-63 | 202 |
| MS.gene21483.t1 | AT2G24800 | 40.323 | 310 | 170 | 6 | 26 | 331 | 31 | 329 | 9.10e-63 | 202 |
| MS.gene21483.t1 | AT4G25980 | 39.339 | 333 | 183 | 8 | 4 | 331 | 8 | 326 | 7.49e-62 | 200 |
| MS.gene21483.t1 | AT1G77100 | 39.940 | 333 | 178 | 8 | 6 | 331 | 2 | 319 | 8.31e-62 | 200 |
| MS.gene21483.t1 | AT4G37520 | 38.835 | 309 | 177 | 5 | 26 | 331 | 27 | 326 | 2.06e-61 | 199 |
| MS.gene21483.t1 | AT4G33870 | 35.693 | 339 | 172 | 6 | 26 | 327 | 68 | 397 | 6.98e-61 | 200 |
| MS.gene21483.t1 | AT2G43480 | 39.936 | 313 | 169 | 8 | 26 | 331 | 35 | 335 | 9.99e-61 | 197 |
| MS.gene21483.t1 | AT2G37130 | 37.013 | 308 | 176 | 6 | 29 | 331 | 2 | 296 | 6.13e-60 | 194 |
| MS.gene21483.t1 | AT2G37130 | 36.825 | 315 | 181 | 6 | 22 | 331 | 26 | 327 | 8.58e-60 | 195 |
| MS.gene21483.t1 | AT4G30170 | 38.535 | 314 | 176 | 8 | 23 | 331 | 24 | 325 | 2.16e-59 | 194 |
| MS.gene21483.t1 | AT5G14130 | 34.218 | 339 | 187 | 6 | 4 | 331 | 17 | 330 | 5.02e-59 | 193 |
| MS.gene21483.t1 | AT5G64100 | 41.447 | 304 | 163 | 6 | 30 | 331 | 41 | 331 | 6.60e-59 | 192 |
| MS.gene21483.t1 | AT5G24070 | 37.700 | 313 | 176 | 7 | 26 | 331 | 35 | 335 | 8.25e-59 | 192 |
| MS.gene21483.t1 | AT5G14130 | 34.218 | 339 | 187 | 6 | 4 | 331 | 58 | 371 | 2.19e-58 | 192 |
| MS.gene21483.t1 | AT3G49960 | 37.082 | 329 | 192 | 7 | 7 | 331 | 12 | 329 | 3.91e-58 | 191 |
| MS.gene21483.t1 | AT4G21960 | 37.419 | 310 | 177 | 5 | 26 | 331 | 31 | 327 | 3.85e-57 | 188 |
| MS.gene21483.t1 | AT5G67400 | 35.736 | 333 | 202 | 5 | 5 | 331 | 3 | 329 | 8.01e-57 | 187 |
| MS.gene21483.t1 | AT1G30870 | 39.355 | 310 | 171 | 8 | 25 | 331 | 50 | 345 | 1.80e-56 | 187 |
| MS.gene21483.t1 | AT3G17070 | 36.508 | 315 | 182 | 9 | 24 | 331 | 36 | 339 | 1.94e-55 | 184 |
| MS.gene21483.t1 | AT4G37530 | 39.615 | 260 | 149 | 5 | 23 | 278 | 24 | 279 | 2.35e-51 | 172 |
| MS.gene21483.t1 | AT5G22410 | 33.832 | 334 | 199 | 10 | 1 | 328 | 5 | 322 | 6.06e-50 | 169 |
| MS.gene21483.t1 | AT5G39580 | 43.636 | 220 | 115 | 6 | 1 | 217 | 1 | 214 | 1.16e-43 | 150 |
| MS.gene21483.t1 | AT4G25980 | 44.737 | 190 | 97 | 5 | 4 | 193 | 53 | 234 | 3.35e-41 | 145 |
| MS.gene21483.t1 | AT3G17070 | 34.035 | 285 | 169 | 10 | 54 | 331 | 4 | 276 | 2.03e-40 | 143 |
| MS.gene21483.t1 | AT2G24800 | 45.509 | 167 | 87 | 2 | 26 | 192 | 31 | 193 | 2.05e-37 | 134 |
| MS.gene21483.t1 | AT3G42570 | 34.459 | 148 | 82 | 4 | 46 | 191 | 13 | 147 | 2.56e-15 | 72.8 |
| MS.gene21483.t1 | AT4G32320 | 27.037 | 270 | 121 | 8 | 57 | 312 | 114 | 321 | 7.95e-13 | 68.9 |
Find 79 sgRNAs with CRISPR-Local
Find 121 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGCCTCTAAAGATGAATT+TGG | 0.209973 | 5.3:-7313750 | None:intergenic |
| TGTCAAATATTCACACTCTA+AGG | 0.214649 | 5.3:+7312860 | MS.gene21483:CDS |
| GGAAATATTAATGTTCTTAC+TGG | 0.240350 | 5.3:+7314552 | MS.gene21483:CDS |
| TGCTCCAAATTCATCTTTAG+AGG | 0.250110 | 5.3:+7313746 | MS.gene21483:CDS |
| AAGGATTAGGAGGCAGGTTT+GGG | 0.252670 | 5.3:+7314470 | MS.gene21483:CDS |
| TTGTCATCCCTTCCGGTAAT+AGG | 0.256822 | 5.3:-7314327 | None:intergenic |
| GAAGGATTAGGAGGCAGGTT+TGG | 0.274461 | 5.3:+7314469 | MS.gene21483:CDS |
| CCACGTAAAGAGTTCAAATT+TGG | 0.287872 | 5.3:-7313251 | None:intergenic |
| GTGCGATGCATCGGTACTTT+TGG | 0.290206 | 5.3:+7313190 | MS.gene21483:CDS |
| AATTAATAATTTCAAGCAAC+AGG | 0.312201 | 5.3:+7313773 | MS.gene21483:CDS |
| ATTGAAGGAAAAGGCATGTT+AGG | 0.316810 | 5.3:+7314411 | MS.gene21483:CDS |
| GGGCAAGATGTTTAAGCTTC+AGG | 0.349687 | 5.3:+7314211 | MS.gene21483:CDS |
| ACCAAGATGGGATGTGTGGC+TGG | 0.353196 | 5.3:+7313671 | MS.gene21483:CDS |
| TGCAAATTTGTCATCCCTTC+CGG | 0.355868 | 5.3:-7314334 | None:intergenic |
| AATTTGGAGCAGGGATGAAT+AGG | 0.364651 | 5.3:-7313734 | None:intergenic |
| TATTGATTATCAAACCGTTT+TGG | 0.372482 | 5.3:-7314375 | None:intergenic |
| TTGTAGATTTGTCAACCCTT+AGG | 0.373734 | 5.3:+7314599 | MS.gene21483:CDS |
| TAATTTCAAGCAACAGGGTC+TGG | 0.383105 | 5.3:+7313779 | MS.gene21483:CDS |
| GAAGACCTGGTGGTTCTATC+AGG | 0.386990 | 5.3:+7313807 | MS.gene21483:CDS |
| TGCTAAGTCTATGATTAAGA+TGG | 0.404255 | 5.3:+7314530 | MS.gene21483:CDS |
| AAGACTTTGATGGAAGGATT+AGG | 0.406088 | 5.3:+7314457 | MS.gene21483:CDS |
| ATCTTGCCCTTCCTATTGTA+TGG | 0.411212 | 5.3:-7314197 | None:intergenic |
| ATAAACATTATTGAAGGAAA+AGG | 0.415090 | 5.3:+7314402 | MS.gene21483:CDS |
| CCTTCCGGTAATAGGACATA+TGG | 0.429530 | 5.3:-7314319 | None:intergenic |
| TTGATCAGTCAAGACTTTGA+TGG | 0.433237 | 5.3:+7314447 | MS.gene21483:CDS |
| CGGTCCATATGTCCTATTAC+CGG | 0.433238 | 5.3:+7314315 | MS.gene21483:CDS |
| TGCTCGTGATGCTGTTGAAT+TGG | 0.436779 | 5.3:+7313358 | MS.gene21483:CDS |
| TGTAGATTTGTCAACCCTTA+GGG | 0.445313 | 5.3:+7314600 | MS.gene21483:CDS |
| CCCAGCCACACATCCCATCT+TGG | 0.449198 | 5.3:-7313672 | None:intergenic |
| GATGTTTAAGCTTCAGGCAG+AGG | 0.452364 | 5.3:+7314217 | MS.gene21483:CDS |
| TGATGGAAGGATTAGGAGGC+AGG | 0.457704 | 5.3:+7314464 | MS.gene21483:CDS |
| TACTTCATAAACATTATTGA+AGG | 0.460027 | 5.3:+7314396 | MS.gene21483:CDS |
| AAAGCAGGTAGCCATACAAT+AGG | 0.462422 | 5.3:+7314186 | MS.gene21483:intron |
| GTCAAATATTCACACTCTAA+GGG | 0.462872 | 5.3:+7312861 | MS.gene21483:CDS |
| GATAAAATATTTACTTGAAG+AGG | 0.463463 | 5.3:+7313292 | MS.gene21483:CDS |
| GGATGTGTGGCTGGGGAGGA+AGG | 0.466895 | 5.3:+7313680 | MS.gene21483:CDS |
| GCTAAGTCTATGATTAAGAT+GGG | 0.481139 | 5.3:+7314531 | MS.gene21483:CDS |
| CAAGATGGGATGTGTGGCTG+GGG | 0.483675 | 5.3:+7313673 | MS.gene21483:CDS |
| CCAAGATGGGATGTGTGGCT+GGG | 0.493544 | 5.3:+7313672 | MS.gene21483:CDS |
| TCTAAAGATGAATTTGGAGC+AGG | 0.507269 | 5.3:-7313744 | None:intergenic |
| TTACCATAACAAAACAATCA+TGG | 0.512399 | 5.3:-7313014 | None:intergenic |
| TGAAGAGAGGAGGACCAAGA+TGG | 0.516172 | 5.3:+7313658 | MS.gene21483:intron |
| GAAGTGAAGGTGAAATAAGA+AGG | 0.517168 | 5.3:+7314574 | MS.gene21483:CDS |
| TCTCACTATCCCTTCAGCTA+AGG | 0.524756 | 5.3:-7312926 | None:intergenic |
| ATGTGCTGATATTCTTGCAA+TGG | 0.525272 | 5.3:+7313334 | MS.gene21483:CDS |
| CTCACTATCCCTTCAGCTAA+GGG | 0.526913 | 5.3:-7312925 | None:intergenic |
| CCAAATTTGAACTCTTTACG+TGG | 0.530593 | 5.3:+7313251 | MS.gene21483:CDS |
| CTCCACTGAAACTTGACTCA+AGG | 0.531127 | 5.3:-7313707 | None:intergenic |
| GATGGGATGTGTGGCTGGGG+AGG | 0.531399 | 5.3:+7313676 | MS.gene21483:CDS |
| ATGACAAGTGAGAAAGAAGC+TGG | 0.532451 | 5.3:+7313227 | MS.gene21483:CDS |
| TCTTGTTCATGATTACTACA+AGG | 0.533843 | 5.3:+7312894 | MS.gene21483:CDS |
| GAAGAGAGGAGGACCAAGAT+GGG | 0.542771 | 5.3:+7313659 | MS.gene21483:intron |
| TGGAGCAGGGATGAATAGGT+TGG | 0.552780 | 5.3:-7313730 | None:intergenic |
| TCCCTTGAGTCAAGTTTCAG+TGG | 0.555521 | 5.3:+7313705 | MS.gene21483:CDS |
| ATATAAGGGGTGCGATGCAT+CGG | 0.563534 | 5.3:+7313181 | MS.gene21483:intron |
| CAGGTAGCCATACAATAGGA+AGG | 0.566467 | 5.3:+7314190 | MS.gene21483:intron |
| AATGTTCTTACTGGAAGTGA+AGG | 0.567607 | 5.3:+7314561 | MS.gene21483:CDS |
| TCCACTGAAACTTGACTCAA+GGG | 0.577180 | 5.3:-7313706 | None:intergenic |
| GGGTCTGGATATTGAAGACC+TGG | 0.580083 | 5.3:+7313794 | MS.gene21483:CDS |
| AGTAGCGACGCTGCTATACG+TGG | 0.583453 | 5.3:-7312979 | None:intergenic |
| ATTAATAATTTCAAGCAACA+GGG | 0.589514 | 5.3:+7313774 | MS.gene21483:CDS |
| TCAGTCAAGACTTTGATGGA+AGG | 0.590453 | 5.3:+7314451 | MS.gene21483:CDS |
| TCAAATATTCACACTCTAAG+GGG | 0.598238 | 5.3:+7312862 | MS.gene21483:CDS |
| AGGATTAGGAGGCAGGTTTG+GGG | 0.605235 | 5.3:+7314471 | MS.gene21483:CDS |
| ACTTTGATGGAAGGATTAGG+AGG | 0.606364 | 5.3:+7314460 | MS.gene21483:CDS |
| CCATATGTCCTATTACCGGA+AGG | 0.607440 | 5.3:+7314319 | MS.gene21483:CDS |
| CTAAAGATGAATTTGGAGCA+GGG | 0.616673 | 5.3:-7313743 | None:intergenic |
| TTTGGTGTTTGAAAATCAAG+GGG | 0.635113 | 5.3:-7314357 | None:intergenic |
| GGACCGTAGGACTCTTCTGA+AGG | 0.636543 | 5.3:-7314298 | None:intergenic |
| AGGTAGCCATACAATAGGAA+GGG | 0.640133 | 5.3:+7314191 | MS.gene21483:intron |
| CATATGTCCTATTACCGGAA+GGG | 0.646460 | 5.3:+7314320 | MS.gene21483:CDS |
| AAGATCAGTAATAGTCTCAG+AGG | 0.648692 | 5.3:-7312826 | None:intergenic |
| TAATAGGACATATGGACCGT+AGG | 0.650725 | 5.3:-7314311 | None:intergenic |
| CAACCTTCAGAAGAGTCCTA+CGG | 0.678058 | 5.3:+7314295 | MS.gene21483:CDS |
| GAGGACCAAGATGGGATGTG+TGG | 0.689019 | 5.3:+7313667 | MS.gene21483:CDS |
| TCTGGATATTGAAGACCTGG+TGG | 0.695296 | 5.3:+7313797 | MS.gene21483:CDS |
| TCAGCACATGAAACAGTGAG+AGG | 0.713764 | 5.3:-7313320 | None:intergenic |
| ATATACCTGATAGAACCACC+AGG | 0.735429 | 5.3:-7313812 | None:intergenic |
| GATAGTGAGACATAACGTAG+CGG | 0.771195 | 5.3:+7312939 | MS.gene21483:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAACATTGTTTATTTCA+TGG | - | chr5.3:7313621-7313640 | None:intergenic | 15.0% |
| !! | TTCTTACTAATTAATTAGAA+GGG | + | chr5.3:7314159-7314178 | MS.gene21483:intron | 15.0% |
| !!! | TGACAGTTTTAAATAAAATT+TGG | - | chr5.3:7314031-7314050 | None:intergenic | 15.0% |
| !! | AATTAATAATTTCAAGCAAC+AGG | + | chr5.3:7313773-7313792 | MS.gene21483:CDS | 20.0% |
| !! | AATTTAGTCCAAAAAATTGT+AGG | + | chr5.3:7313869-7313888 | MS.gene21483:intron | 20.0% |
| !! | ATAAACATTATTGAAGGAAA+AGG | + | chr5.3:7314402-7314421 | MS.gene21483:CDS | 20.0% |
| !! | ATATTACTACATTGTTCATA+GGG | + | chr5.3:7313592-7313611 | MS.gene21483:intron | 20.0% |
| !! | ATTAATAATTTCAAGCAACA+GGG | + | chr5.3:7313774-7313793 | MS.gene21483:CDS | 20.0% |
| !! | ATTTAGTCCAAAAAATTGTA+GGG | + | chr5.3:7313870-7313889 | MS.gene21483:intron | 20.0% |
| !! | GATAAAATATTTACTTGAAG+AGG | + | chr5.3:7313292-7313311 | MS.gene21483:CDS | 20.0% |
| !! | GTTCTTACTAATTAATTAGA+AGG | + | chr5.3:7314158-7314177 | MS.gene21483:intron | 20.0% |
| !! | GTTGTTGAAAATGAATATAA+GGG | + | chr5.3:7313167-7313186 | MS.gene21483:intron | 20.0% |
| !! | TACTTCATAAACATTATTGA+AGG | + | chr5.3:7314396-7314415 | MS.gene21483:CDS | 20.0% |
| !! | TCTTACTAATTAATTAGAAG+GGG | + | chr5.3:7314160-7314179 | MS.gene21483:intron | 20.0% |
| !! | TGTATTGAATCAAGATAATT+TGG | - | chr5.3:7313961-7313980 | None:intergenic | 20.0% |
| !! | TTGTTGAAAATGAATATAAG+GGG | + | chr5.3:7313168-7313187 | MS.gene21483:intron | 20.0% |
| !!! | AAAGAAAAGTTTTTCATTAG+AGG | - | chr5.3:7314502-7314521 | None:intergenic | 20.0% |
| !!! | TACAATTTTTTGGACTAAAT+TGG | - | chr5.3:7313870-7313889 | None:intergenic | 20.0% |
| ! | CTTACTAATTAATTAGAAGG+GGG | + | chr5.3:7314161-7314180 | MS.gene21483:intron | 25.0% |
| ! | GAGTTCGGTTATTAAAAAAT+TGG | - | chr5.3:7313436-7313455 | None:intergenic | 25.0% |
| ! | GATATTACTACATTGTTCAT+AGG | + | chr5.3:7313591-7313610 | MS.gene21483:intron | 25.0% |
| ! | GGAAATATTAATGTTCTTAC+TGG | + | chr5.3:7314552-7314571 | MS.gene21483:CDS | 25.0% |
| ! | GGTTGTTGAAAATGAATATA+AGG | + | chr5.3:7313166-7313185 | MS.gene21483:intron | 25.0% |
| ! | TTACCATAACAAAACAATCA+TGG | - | chr5.3:7313017-7313036 | None:intergenic | 25.0% |
| !! | AATCTTGAAGTACTTATACA+TGG | - | chr5.3:7313044-7313063 | None:intergenic | 25.0% |
| !! | TGTTTTACCCTACAATTTTT+TGG | - | chr5.3:7313880-7313899 | None:intergenic | 25.0% |
| !! | TTGATTTTCAAACACCAAAA+CGG | + | chr5.3:7314361-7314380 | MS.gene21483:CDS | 25.0% |
| !!! | TATTGATTATCAAACCGTTT+TGG | - | chr5.3:7314378-7314397 | None:intergenic | 25.0% |
| !!! | TTTTGGTGTTTGAAAATCAA+GGG | - | chr5.3:7314361-7314380 | None:intergenic | 25.0% |
| AAGAAAAAGAGTAGAGAGAA+AGG | - | chr5.3:7313396-7313415 | None:intergenic | 30.0% | |
| AATAATTGAAAACACCGTGT+AGG | - | chr5.3:7313109-7313128 | None:intergenic | 30.0% | |
| ATTGATTGAACTGTTCAGTT+CGG | + | chr5.3:7313530-7313549 | MS.gene21483:intron | 30.0% | |
| CTGCTATTAACTAGTTCAAT+TGG | + | chr5.3:7313569-7313588 | MS.gene21483:intron | 30.0% | |
| GCTAAGTCTATGATTAAGAT+GGG | + | chr5.3:7314531-7314550 | MS.gene21483:CDS | 30.0% | |
| GTCAAATATTCACACTCTAA+GGG | + | chr5.3:7312861-7312880 | MS.gene21483:CDS | 30.0% | |
| TCAAATATTCACACTCTAAG+GGG | + | chr5.3:7312862-7312881 | MS.gene21483:CDS | 30.0% | |
| TCTTGTTCATGATTACTACA+AGG | + | chr5.3:7312894-7312913 | MS.gene21483:CDS | 30.0% | |
| TGCTAAGTCTATGATTAAGA+TGG | + | chr5.3:7314530-7314549 | MS.gene21483:CDS | 30.0% | |
| TGTCAAATATTCACACTCTA+AGG | + | chr5.3:7312860-7312879 | MS.gene21483:CDS | 30.0% | |
| ! | AAAGCCTCTAAAGATGAATT+TGG | - | chr5.3:7313753-7313772 | None:intergenic | 30.0% |
| ! | TTCTCTCTACTCTTTTTCTT+TGG | + | chr5.3:7313396-7313415 | MS.gene21483:intron | 30.0% |
| ! | TTTTTGTCTGTCATACATTG+TGG | + | chr5.3:7313145-7313164 | MS.gene21483:intron | 30.0% |
| !! | CTTCCATGATTGTTTTGTTA+TGG | + | chr5.3:7313011-7313030 | MS.gene21483:CDS | 30.0% |
| !! | TTTGGTGTTTGAAAATCAAG+GGG | - | chr5.3:7314360-7314379 | None:intergenic | 30.0% |
| !!! | CTATTGTTTGTTTTGAAGAG+AGG | + | chr5.3:7313645-7313664 | MS.gene21483:intron | 30.0% |
| !!! | GTTTTGGTGTTTGAAAATCA+AGG | - | chr5.3:7314362-7314381 | None:intergenic | 30.0% |
| AAAAATGTCCCTTAGCTGAA+GGG | + | chr5.3:7312917-7312936 | MS.gene21483:CDS | 35.0% | |
| AACTGACATTTACTGCTGTT+CGG | - | chr5.3:7313501-7313520 | None:intergenic | 35.0% | |
| AAGACTTTGATGGAAGGATT+AGG | + | chr5.3:7314457-7314476 | MS.gene21483:CDS | 35.0% | |
| AAGATCAGTAATAGTCTCAG+AGG | - | chr5.3:7312829-7312848 | None:intergenic | 35.0% | |
| AATGTTCTTACTGGAAGTGA+AGG | + | chr5.3:7314561-7314580 | MS.gene21483:CDS | 35.0% | |
| CCAAATTTGAACTCTTTACG+TGG | + | chr5.3:7313251-7313270 | MS.gene21483:CDS | 35.0% | |
| CCACGTAAAGAGTTCAAATT+TGG | - | chr5.3:7313254-7313273 | None:intergenic | 35.0% | |
| GAAGTGAAGGTGAAATAAGA+AGG | + | chr5.3:7314574-7314593 | MS.gene21483:CDS | 35.0% | |
| TGCTCCAAATTCATCTTTAG+AGG | + | chr5.3:7313746-7313765 | MS.gene21483:CDS | 35.0% | |
| TTGATCAGTCAAGACTTTGA+TGG | + | chr5.3:7314447-7314466 | MS.gene21483:CDS | 35.0% | |
| TTTACTGCTGTTCGGTTATT+TGG | - | chr5.3:7313493-7313512 | None:intergenic | 35.0% | |
| ! | ATGTGCTGATATTCTTGCAA+TGG | + | chr5.3:7313334-7313353 | MS.gene21483:CDS | 35.0% |
| ! | ATTGAAGGAAAAGGCATGTT+AGG | + | chr5.3:7314411-7314430 | MS.gene21483:CDS | 35.0% |
| ! | CTAAAGATGAATTTGGAGCA+GGG | - | chr5.3:7313746-7313765 | None:intergenic | 35.0% |
| ! | TCTAAAGATGAATTTGGAGC+AGG | - | chr5.3:7313747-7313766 | None:intergenic | 35.0% |
| !!! | TTGTTTGTTTTGAAGAGAGG+AGG | + | chr5.3:7313648-7313667 | MS.gene21483:intron | 35.0% |
| AAAGCAGGTAGCCATACAAT+AGG | + | chr5.3:7314186-7314205 | MS.gene21483:intron | 40.0% | |
| AATTAGAAGGGGGAAAAAGC+AGG | + | chr5.3:7314171-7314190 | MS.gene21483:intron | 40.0% | |
| ACTTTGATGGAAGGATTAGG+AGG | + | chr5.3:7314460-7314479 | MS.gene21483:CDS | 40.0% | |
| AGGTAGCCATACAATAGGAA+GGG | + | chr5.3:7314191-7314210 | MS.gene21483:intron | 40.0% | |
| ATATACCTGATAGAACCACC+AGG | - | chr5.3:7313815-7313834 | None:intergenic | 40.0% | |
| ATCTTGCCCTTCCTATTGTA+TGG | - | chr5.3:7314200-7314219 | None:intergenic | 40.0% | |
| ATGACAAGTGAGAAAGAAGC+TGG | + | chr5.3:7313227-7313246 | MS.gene21483:CDS | 40.0% | |
| CATATGTCCTATTACCGGAA+GGG | + | chr5.3:7314320-7314339 | MS.gene21483:CDS | 40.0% | |
| GAAAAATGTCCCTTAGCTGA+AGG | + | chr5.3:7312916-7312935 | MS.gene21483:CDS | 40.0% | |
| GATAGTGAGACATAACGTAG+CGG | + | chr5.3:7312939-7312958 | MS.gene21483:CDS | 40.0% | |
| TAATAGGACATATGGACCGT+AGG | - | chr5.3:7314314-7314333 | None:intergenic | 40.0% | |
| TAATTTCAAGCAACAGGGTC+TGG | + | chr5.3:7313779-7313798 | MS.gene21483:CDS | 40.0% | |
| TCAGTCAAGACTTTGATGGA+AGG | + | chr5.3:7314451-7314470 | MS.gene21483:CDS | 40.0% | |
| TCCACTGAAACTTGACTCAA+GGG | - | chr5.3:7313709-7313728 | None:intergenic | 40.0% | |
| TGCAAATTTGTCATCCCTTC+CGG | - | chr5.3:7314337-7314356 | None:intergenic | 40.0% | |
| ! | AATTTGGAGCAGGGATGAAT+AGG | - | chr5.3:7313737-7313756 | None:intergenic | 40.0% |
| ! | TGTTCGGTTATTTGGTGACT+CGG | - | chr5.3:7313485-7313504 | None:intergenic | 40.0% |
| !! | GTACTTTTGGACAGTGTTGA+GGG | + | chr5.3:7313203-7313222 | MS.gene21483:CDS | 40.0% |
| AAGGATTAGGAGGCAGGTTT+GGG | + | chr5.3:7314470-7314489 | MS.gene21483:CDS | 45.0% | |
| CAACCTTCAGAAGAGTCCTA+CGG | + | chr5.3:7314295-7314314 | MS.gene21483:CDS | 45.0% | |
| CAGGTAGCCATACAATAGGA+AGG | + | chr5.3:7314190-7314209 | MS.gene21483:intron | 45.0% | |
| CCATATGTCCTATTACCGGA+AGG | + | chr5.3:7314319-7314338 | MS.gene21483:CDS | 45.0% | |
| CCTTCCGGTAATAGGACATA+TGG | - | chr5.3:7314322-7314341 | None:intergenic | 45.0% | |
| CGGTCCATATGTCCTATTAC+CGG | + | chr5.3:7314315-7314334 | MS.gene21483:CDS | 45.0% | |
| CTCACTATCCCTTCAGCTAA+GGG | - | chr5.3:7312928-7312947 | None:intergenic | 45.0% | |
| CTCCACTGAAACTTGACTCA+AGG | - | chr5.3:7313710-7313729 | None:intergenic | 45.0% | |
| GATGTTTAAGCTTCAGGCAG+AGG | + | chr5.3:7314217-7314236 | MS.gene21483:CDS | 45.0% | |
| GGGCAAGATGTTTAAGCTTC+AGG | + | chr5.3:7314211-7314230 | MS.gene21483:CDS | 45.0% | |
| TCAGCACATGAAACAGTGAG+AGG | - | chr5.3:7313323-7313342 | None:intergenic | 45.0% | |
| TCCCTTGAGTCAAGTTTCAG+TGG | + | chr5.3:7313705-7313724 | MS.gene21483:CDS | 45.0% | |
| TCTCACTATCCCTTCAGCTA+AGG | - | chr5.3:7312929-7312948 | None:intergenic | 45.0% | |
| TCTGGATATTGAAGACCTGG+TGG | + | chr5.3:7313797-7313816 | MS.gene21483:CDS | 45.0% | |
| TGCTCGTGATGCTGTTGAAT+TGG | + | chr5.3:7313358-7313377 | MS.gene21483:CDS | 45.0% | |
| TTGCAGTTCGATGTCGAGTT+CGG | - | chr5.3:7313451-7313470 | None:intergenic | 45.0% | |
| TTGTCATCCCTTCCGGTAAT+AGG | - | chr5.3:7314330-7314349 | None:intergenic | 45.0% | |
| ! | ATATAAGGGGTGCGATGCAT+CGG | + | chr5.3:7313181-7313200 | MS.gene21483:intron | 45.0% |
| ! | GGTACTTTTGGACAGTGTTG+AGG | + | chr5.3:7313202-7313221 | MS.gene21483:CDS | 45.0% |
| !! | GTTATTTGGTGACTCGGTCA+TGG | - | chr5.3:7313479-7313498 | None:intergenic | 45.0% |
| AGGATTAGGAGGCAGGTTTG+GGG | + | chr5.3:7314471-7314490 | MS.gene21483:CDS | 50.0% | |
| GAAGAGAGGAGGACCAAGAT+GGG | + | chr5.3:7313659-7313678 | MS.gene21483:intron | 50.0% | |
| GAAGGATTAGGAGGCAGGTT+TGG | + | chr5.3:7314469-7314488 | MS.gene21483:CDS | 50.0% | |
| GGGTCTGGATATTGAAGACC+TGG | + | chr5.3:7313794-7313813 | MS.gene21483:CDS | 50.0% | |
| TGAAGAGAGGAGGACCAAGA+TGG | + | chr5.3:7313658-7313677 | MS.gene21483:intron | 50.0% | |
| TGATGGAAGGATTAGGAGGC+AGG | + | chr5.3:7314464-7314483 | MS.gene21483:CDS | 50.0% | |
| TGGAGCAGGGATGAATAGGT+TGG | - | chr5.3:7313733-7313752 | None:intergenic | 50.0% | |
| ! | GAAGACCTGGTGGTTCTATC+AGG | + | chr5.3:7313807-7313826 | MS.gene21483:CDS | 50.0% |
| !! | GTGCGATGCATCGGTACTTT+TGG | + | chr5.3:7313190-7313209 | MS.gene21483:CDS | 50.0% |
| ACCAAGATGGGATGTGTGGC+TGG | + | chr5.3:7313671-7313690 | MS.gene21483:CDS | 55.0% | |
| AGTAGCGACGCTGCTATACG+TGG | - | chr5.3:7312982-7313001 | None:intergenic | 55.0% | |
| CAAGATGGGATGTGTGGCTG+GGG | + | chr5.3:7313673-7313692 | MS.gene21483:CDS | 55.0% | |
| CCAAGATGGGATGTGTGGCT+GGG | + | chr5.3:7313672-7313691 | MS.gene21483:CDS | 55.0% | |
| CCACTTGCGCTAGACCTACA+CGG | + | chr5.3:7313092-7313111 | MS.gene21483:intron | 55.0% | |
| GAGGACCAAGATGGGATGTG+TGG | + | chr5.3:7313667-7313686 | MS.gene21483:CDS | 55.0% | |
| GGACCGTAGGACTCTTCTGA+AGG | - | chr5.3:7314301-7314320 | None:intergenic | 55.0% | |
| GTAGGTCTAGCGCAAGTGGT+TGG | - | chr5.3:7313091-7313110 | None:intergenic | 55.0% | |
| CCCAGCCACACATCCCATCT+TGG | - | chr5.3:7313675-7313694 | None:intergenic | 60.0% | |
| CCGTGTAGGTCTAGCGCAAG+TGG | - | chr5.3:7313095-7313114 | None:intergenic | 60.0% | |
| GATGGGATGTGTGGCTGGGG+AGG | + | chr5.3:7313676-7313695 | MS.gene21483:CDS | 65.0% | |
| GGATGTGTGGCTGGGGAGGA+AGG | + | chr5.3:7313680-7313699 | MS.gene21483:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 7312820 | 7314620 | 7312820 | ID=MS.gene21483 |
| chr5.3 | mRNA | 7312820 | 7314620 | 7312820 | ID=MS.gene21483.t1;Parent=MS.gene21483 |
| chr5.3 | exon | 7312820 | 7313032 | 7312820 | ID=MS.gene21483.t1.exon1;Parent=MS.gene21483.t1 |
| chr5.3 | CDS | 7312820 | 7313032 | 7312820 | ID=cds.MS.gene21483.t1;Parent=MS.gene21483.t1 |
| chr5.3 | exon | 7313188 | 7313379 | 7313188 | ID=MS.gene21483.t1.exon2;Parent=MS.gene21483.t1 |
| chr5.3 | CDS | 7313188 | 7313379 | 7313188 | ID=cds.MS.gene21483.t1;Parent=MS.gene21483.t1 |
| chr5.3 | exon | 7313663 | 7313828 | 7313663 | ID=MS.gene21483.t1.exon3;Parent=MS.gene21483.t1 |
| chr5.3 | CDS | 7313663 | 7313828 | 7313663 | ID=cds.MS.gene21483.t1;Parent=MS.gene21483.t1 |
| chr5.3 | exon | 7314193 | 7314620 | 7314193 | ID=MS.gene21483.t1.exon4;Parent=MS.gene21483.t1 |
| chr5.3 | CDS | 7314193 | 7314620 | 7314193 | ID=cds.MS.gene21483.t1;Parent=MS.gene21483.t1 |
| Gene Sequence |
| Protein sequence |
