AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene030278

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene030278.t1 MTR_6g092660 95.960 297 12 0 1 297 1 297 0.0 582
MS.gene030278.t1 MTR_8g101570 60.410 293 108 3 1 292 1 286 1.06e-121 350
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene030278.t1 AT2G19570 55.814 301 121 4 1 292 1 298 1.66e-108 317
MS.gene030278.t1 AT4G29610 50.719 278 125 5 28 298 21 293 1.39e-85 259
MS.gene030278.t1 AT4G29600 48.658 298 134 6 5 292 8 296 2.25e-82 251
MS.gene030278.t1 AT4G29620 45.791 297 138 5 5 293 29 310 5.90e-75 233
MS.gene030278.t1 AT4G29570 44.625 307 140 11 1 292 1 292 4.62e-63 201
MS.gene030278.t1 AT4G29630 48.230 226 103 3 2 219 4 223 4.84e-59 188
MS.gene030278.t1 AT4G29640 41.613 310 155 11 2 298 3 299 2.03e-56 186
MS.gene030278.t1 AT4G29580 43.657 268 131 8 27 282 27 286 3.11e-50 168
MS.gene030278.t1 AT4G29580 43.657 268 131 8 27 282 27 286 6.23e-49 169
MS.gene030278.t1 AT4G29650 39.041 292 128 8 2 292 3 245 2.58e-47 159

Find 98 sgRNAs with CRISPR-Local

Find 101 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCTTCAGGTGTGGCTTTAC+TGG 0.180402 6.2:+89087567 MS.gene030278:CDS
GATGCTTCTATTATGAATTT+AGG 0.212943 6.2:-89086968 None:intergenic
GAGTTTCTTTGTTATGAAAA+AGG 0.248603 6.2:-89087213 None:intergenic
TTAGGGTTAGGTTTGTTGAT+TGG 0.275993 6.2:-89087009 None:intergenic
TAGGGTTAGGTTTGTTGATT+GGG 0.297609 6.2:-89087008 None:intergenic
AAGAGAAGAGGAACATGTTT+AGG 0.300564 6.2:-89087418 None:intergenic
TGATGGGAAGGAGTTGGGTT+AGG 0.306745 6.2:-89087027 None:intergenic
TCCTAGCATGGGACCGGTTC+AGG 0.312849 6.2:+89087642 MS.gene030278:CDS
GACGGCGGCAACGTGAAATT+TGG 0.324323 6.2:-89087089 None:intergenic
CTTTCAGTGCTGCATCCTTC+AGG 0.328078 6.2:-89087510 None:intergenic
ATACGGCAAGGCTGTTTCTT+AGG 0.332593 6.2:+89087773 MS.gene030278:CDS
TGTTTATAAAGGTAGTTATA+TGG 0.339228 6.2:+89087603 MS.gene030278:CDS
GAATTCCTTTCTCATCCCTT+TGG 0.345512 6.2:+89087379 MS.gene030278:CDS
GACAATGATGGGAAGGAGTT+GGG 0.351225 6.2:-89087032 None:intergenic
GGAGACGGTGCGGCGGAGTA+TGG 0.354349 6.2:+89087694 MS.gene030278:CDS
GGGACCGGTTCAGGCTGCTT+TGG 0.365571 6.2:+89087651 MS.gene030278:CDS
CACGGATTTCTTGAAGAAAC+TGG 0.368852 6.2:-89087282 None:intergenic
GAAGGAGTTGGGTTAGGGTT+AGG 0.374079 6.2:-89087021 None:intergenic
GCAACGTGAAATTTGGAGAT+AGG 0.374243 6.2:-89087082 None:intergenic
CCGTACAGTAACTCGCCTTC+AGG 0.374556 6.2:+89087553 MS.gene030278:CDS
AGAGGATGCGGTGGTGAAAC+AGG 0.378180 6.2:+89087747 MS.gene030278:CDS
TAAACATGTTCCTCTTCTCT+TGG 0.383408 6.2:+89087420 MS.gene030278:CDS
GATGGGAAGGAGTTGGGTTA+GGG 0.393643 6.2:-89087026 None:intergenic
CACGTTGCCGCCGTCGCTGT+TGG 0.395330 6.2:+89087097 MS.gene030278:CDS
TCACGTGGGAATGTTTATAA+AGG 0.399839 6.2:+89087592 MS.gene030278:CDS
GCCACCAAAGCAGCCTGAAC+CGG 0.415674 6.2:-89087655 None:intergenic
ACCGGTTCAGGCTGCTTTGG+TGG 0.418994 6.2:+89087654 MS.gene030278:CDS
TGACAATGATGGGAAGGAGT+TGG 0.424779 6.2:-89087033 None:intergenic
TGCGGCGGAGTATGGAGAAT+TGG 0.433354 6.2:+89087702 MS.gene030278:CDS
GTATGGTGGAAAGGAAGGTT+AGG 0.441709 6.2:-89087160 None:intergenic
GAGATAGGGACACGGGCTAA+TGG 0.450344 6.2:-89087067 None:intergenic
AGGGACACGGGCTAATGGTT+GGG 0.455742 6.2:-89087062 None:intergenic
CTTGAAGAAACTGGCGGCAA+TGG 0.468441 6.2:-89087273 None:intergenic
GCCGTCGCTGTTGGAATCTC+CGG 0.472457 6.2:+89087106 MS.gene030278:CDS
TTTATTGTCGGTGCCGGAGA+CGG 0.475580 6.2:+89087679 MS.gene030278:CDS
AGAATTGGTGGAAGCGGTGT+TGG 0.478163 6.2:+89087717 MS.gene030278:CDS
GGATGGTATGGTGGAAAGGA+AGG 0.479635 6.2:-89087165 None:intergenic
TTGGGATGATTTGACAATGA+TGG 0.485433 6.2:-89087044 None:intergenic
TAGGGACACGGGCTAATGGT+TGG 0.490242 6.2:-89087063 None:intergenic
TCTTCGAATCAGATGTTATG+AGG 0.491889 6.2:-89087324 None:intergenic
ATACTCCGCCGCACCGTCTC+CGG 0.496985 6.2:-89087692 None:intergenic
CTTCAAGAAATCCGTGGCGC+CGG 0.503869 6.2:+89087289 MS.gene030278:CDS
ATTGGTGGAAGCGGTGTTGG+TGG 0.506203 6.2:+89087720 MS.gene030278:CDS
TTCAATAAAGCCACACCTGA+AGG 0.511344 6.2:+89087495 MS.gene030278:CDS
TGCAGCTTATAATCCTAGCA+TGG 0.518529 6.2:+89087630 MS.gene030278:CDS
AGTGCTGCATCCTTCAGGTG+TGG 0.533445 6.2:-89087505 None:intergenic
TGGGATGATTTGACAATGAT+GGG 0.533779 6.2:-89087043 None:intergenic
GAGAAACTGTTCAGCATGGA+TGG 0.539294 6.2:-89087182 None:intergenic
GCCTGAACCGGTCCCATGCT+AGG 0.541079 6.2:-89087643 None:intergenic
TATGGTGGAAAGGAAGGTTA+GGG 0.550775 6.2:-89087159 None:intergenic
AGAAGATCATGAGGACCAAA+GGG 0.550838 6.2:-89087394 None:intergenic
AAGAAGATCATGAGGACCAA+AGG 0.551279 6.2:-89087395 None:intergenic
TCCAGTAAAGCCACACCTGA+AGG 0.553848 6.2:-89087568 None:intergenic
CAACGTGAAATTTGGAGATA+GGG 0.554542 6.2:-89087081 None:intergenic
ACTGTTCAGCATGGATGGTA+TGG 0.559714 6.2:-89087177 None:intergenic
GAGGACCAAAGGGATGAGAA+AGG 0.560227 6.2:-89087384 None:intergenic
AGCGGTGTTGGTGGAGAAAG+AGG 0.561960 6.2:+89087729 MS.gene030278:CDS
CAGTAACTCGCCTTCAGGTG+TGG 0.564454 6.2:+89087558 MS.gene030278:CDS
GGTGGTGAAACAGGAGGATA+CGG 0.564967 6.2:+89087756 MS.gene030278:CDS
GCATGGATGGTATGGTGGAA+AGG 0.568653 6.2:-89087169 None:intergenic
AACTGGCGGCAATGGCCACA+AGG 0.571846 6.2:-89087265 None:intergenic
TTATAATCCTAGCATGGGAC+CGG 0.572239 6.2:+89087636 MS.gene030278:CDS
GTATGGAGAATTGGTGGAAG+CGG 0.578039 6.2:+89087711 MS.gene030278:CDS
GAAGCTACATTGAGGTGCGA+TGG 0.586638 6.2:-89087797 None:intergenic
TTAAGAGAAACTGTTCAGCA+TGG 0.588008 6.2:-89087186 None:intergenic
GAAGGATGCAGCACTGAAAG+CGG 0.589558 6.2:+89087513 MS.gene030278:CDS
ATCTCCGGTCGAATCTTCAT+CGG 0.594505 6.2:+89087121 MS.gene030278:CDS
GAGGAATATCTCCGGCGCCA+CGG 0.594736 6.2:-89087300 None:intergenic
GGCGGAGTATGGAGAATTGG+TGG 0.610347 6.2:+89087705 MS.gene030278:CDS
CAGTTTCTTCAAGAAATCCG+TGG 0.610963 6.2:+89087283 MS.gene030278:CDS
GTTGGTGGAGAAAGAGGATG+CGG 0.610963 6.2:+89087735 MS.gene030278:CDS
TGTCGGTGCCGGAGACGGTG+CGG 0.611623 6.2:+89087684 MS.gene030278:CDS
ACCGGAGATTCCAACAGCGA+CGG 0.615346 6.2:-89087107 None:intergenic
GCAGCTTATAATCCTAGCAT+GGG 0.617961 6.2:+89087631 MS.gene030278:CDS
GGAGATTCCAACAGCGACGG+CGG 0.619242 6.2:-89087104 None:intergenic
GCTGTATCCGCTGCACCTTG+TGG 0.624321 6.2:+89087250 MS.gene030278:CDS
TGACGTGGTTCCAAGAGAAG+AGG 0.624352 6.2:-89087430 None:intergenic
TATGAGGAGAGGAATATCTC+CGG 0.625052 6.2:-89087308 None:intergenic
GACGCCGATGAAGATTCGAC+CGG 0.625190 6.2:-89087125 None:intergenic
ATGATTTGACAATGATGGGA+AGG 0.628836 6.2:-89087039 None:intergenic
CGGTGCCGGAGACGGTGCGG+CGG 0.633103 6.2:+89087687 MS.gene030278:CDS
CCTGAAGGCGAGTTACTGTA+CGG 0.638330 6.2:-89087553 None:intergenic
GAATCAGATGTTATGAGGAG+AGG 0.641146 6.2:-89087319 None:intergenic
GCAATGGCCACAAGGTGCAG+CGG 0.645064 6.2:-89087257 None:intergenic
GTTCAGCATGGATGGTATGG+TGG 0.647203 6.2:-89087174 None:intergenic
AAATTTGGAGATAGGGACAC+GGG 0.647299 6.2:-89087074 None:intergenic
GTGGCTTTACTGGATTCACG+TGG 0.658001 6.2:+89087577 MS.gene030278:CDS
TGTTTAGGAAGAAGATCATG+AGG 0.661557 6.2:-89087403 None:intergenic
ACCACATTGAAGCTACATTG+AGG 0.663804 6.2:-89087805 None:intergenic
AAGGTGCAGCGGATACAGCA+AGG 0.664429 6.2:-89087246 None:intergenic
GAAATTTGGAGATAGGGACA+CGG 0.671783 6.2:-89087075 None:intergenic
GGATTTCTTGAAGAAACTGG+CGG 0.674203 6.2:-89087279 None:intergenic
TGGCTTTACTGGATTCACGT+GGG 0.675090 6.2:+89087578 MS.gene030278:CDS
GGTGGAGAAAGAGGATGCGG+TGG 0.682018 6.2:+89087738 MS.gene030278:CDS
GGATGCGGTGGTGAAACAGG+AGG 0.700486 6.2:+89087750 MS.gene030278:CDS
ACCTCAATGTAGCTTCAATG+TGG 0.704261 6.2:+89087804 MS.gene030278:CDS
AAACACAAATCATTGTGACG+TGG 0.715133 6.2:-89087445 None:intergenic
TGAAACAGGAGGATACGGCA+AGG 0.721213 6.2:+89087761 MS.gene030278:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGTTTATAAAGGTAGTTATA+TGG + chr6.2:89087603-89087622 MS.gene030278:CDS 20.0%
!!! TTGTGTTTTATAGAAATAGA+AGG + chr6.2:89087460-89087479 MS.gene030278:CDS 20.0%
! GATGCTTCTATTATGAATTT+AGG - chr6.2:89086971-89086990 None:intergenic 25.0%
!! GAGTTTCTTTGTTATGAAAA+AGG - chr6.2:89087216-89087235 None:intergenic 25.0%
AAACACAAATCATTGTGACG+TGG - chr6.2:89087448-89087467 None:intergenic 35.0%
AAGAGAAGAGGAACATGTTT+AGG - chr6.2:89087421-89087440 None:intergenic 35.0%
CAACGTGAAATTTGGAGATA+GGG - chr6.2:89087084-89087103 None:intergenic 35.0%
TAAACATGTTCCTCTTCTCT+TGG + chr6.2:89087420-89087439 MS.gene030278:CDS 35.0%
TCACGTGGGAATGTTTATAA+AGG + chr6.2:89087592-89087611 MS.gene030278:CDS 35.0%
TCTTCGAATCAGATGTTATG+AGG - chr6.2:89087327-89087346 None:intergenic 35.0%
TGGGATGATTTGACAATGAT+GGG - chr6.2:89087046-89087065 None:intergenic 35.0%
TGTTTAGGAAGAAGATCATG+AGG - chr6.2:89087406-89087425 None:intergenic 35.0%
TTAAGAGAAACTGTTCAGCA+TGG - chr6.2:89087189-89087208 None:intergenic 35.0%
TTGGGATGATTTGACAATGA+TGG - chr6.2:89087047-89087066 None:intergenic 35.0%
! ATGATTTGACAATGATGGGA+AGG - chr6.2:89087042-89087061 None:intergenic 35.0%
!! TAGGGTTAGGTTTGTTGATT+GGG - chr6.2:89087011-89087030 None:intergenic 35.0%
!! TTAGGGTTAGGTTTGTTGAT+TGG - chr6.2:89087012-89087031 None:intergenic 35.0%
AAATTTGGAGATAGGGACAC+GGG - chr6.2:89087077-89087096 None:intergenic 40.0%
AAGAAGATCATGAGGACCAA+AGG - chr6.2:89087398-89087417 None:intergenic 40.0%
ACCACATTGAAGCTACATTG+AGG - chr6.2:89087808-89087827 None:intergenic 40.0%
ACCTCAATGTAGCTTCAATG+TGG + chr6.2:89087804-89087823 MS.gene030278:CDS 40.0%
AGAAGATCATGAGGACCAAA+GGG - chr6.2:89087397-89087416 None:intergenic 40.0%
CACGGATTTCTTGAAGAAAC+TGG - chr6.2:89087285-89087304 None:intergenic 40.0%
CAGTTTCTTCAAGAAATCCG+TGG + chr6.2:89087283-89087302 MS.gene030278:CDS 40.0%
GAAATTTGGAGATAGGGACA+CGG - chr6.2:89087078-89087097 None:intergenic 40.0%
GAATCAGATGTTATGAGGAG+AGG - chr6.2:89087322-89087341 None:intergenic 40.0%
GAATTCCTTTCTCATCCCTT+TGG + chr6.2:89087379-89087398 MS.gene030278:CDS 40.0%
GCAACGTGAAATTTGGAGAT+AGG - chr6.2:89087085-89087104 None:intergenic 40.0%
GCAGCTTATAATCCTAGCAT+GGG + chr6.2:89087631-89087650 MS.gene030278:CDS 40.0%
GGATTTCTTGAAGAAACTGG+CGG - chr6.2:89087282-89087301 None:intergenic 40.0%
TATGAGGAGAGGAATATCTC+CGG - chr6.2:89087311-89087330 None:intergenic 40.0%
TGCAGCTTATAATCCTAGCA+TGG + chr6.2:89087630-89087649 MS.gene030278:CDS 40.0%
TTATAATCCTAGCATGGGAC+CGG + chr6.2:89087636-89087655 MS.gene030278:CDS 40.0%
TTCAATAAAGCCACACCTGA+AGG + chr6.2:89087495-89087514 MS.gene030278:CDS 40.0%
! TATGGTGGAAAGGAAGGTTA+GGG - chr6.2:89087162-89087181 None:intergenic 40.0%
!! GCTTTGGTGGCTTTTATTGT+CGG + chr6.2:89087667-89087686 MS.gene030278:CDS 40.0%
ACTGTTCAGCATGGATGGTA+TGG - chr6.2:89087180-89087199 None:intergenic 45.0%
ATCTCCGGTCGAATCTTCAT+CGG + chr6.2:89087121-89087140 MS.gene030278:CDS 45.0%
GAGAAACTGTTCAGCATGGA+TGG - chr6.2:89087185-89087204 None:intergenic 45.0%
GTATGGAGAATTGGTGGAAG+CGG + chr6.2:89087711-89087730 MS.gene030278:CDS 45.0%
! GACAATGATGGGAAGGAGTT+GGG - chr6.2:89087035-89087054 None:intergenic 45.0%
! GTATGGTGGAAAGGAAGGTT+AGG - chr6.2:89087163-89087182 None:intergenic 45.0%
! TGACAATGATGGGAAGGAGT+TGG - chr6.2:89087036-89087055 None:intergenic 45.0%
! TGGCTTTACTGGATTCACGT+GGG + chr6.2:89087578-89087597 MS.gene030278:CDS 45.0%
!! ATACGGCAAGGCTGTTTCTT+AGG + chr6.2:89087773-89087792 MS.gene030278:CDS 45.0%
AGAATTGGTGGAAGCGGTGT+TGG + chr6.2:89087717-89087736 MS.gene030278:CDS 50.0%
CCTGAAGGCGAGTTACTGTA+CGG - chr6.2:89087556-89087575 None:intergenic 50.0%
CTTGAAGAAACTGGCGGCAA+TGG - chr6.2:89087276-89087295 None:intergenic 50.0%
CTTTCAGTGCTGCATCCTTC+AGG - chr6.2:89087513-89087532 None:intergenic 50.0%
GAAGCTACATTGAGGTGCGA+TGG - chr6.2:89087800-89087819 None:intergenic 50.0%
GAGGACCAAAGGGATGAGAA+AGG - chr6.2:89087387-89087406 None:intergenic 50.0%
GATGGGAAGGAGTTGGGTTA+GGG - chr6.2:89087029-89087048 None:intergenic 50.0%
GGTGGTGAAACAGGAGGATA+CGG + chr6.2:89087756-89087775 MS.gene030278:CDS 50.0%
GTTCAGCATGGATGGTATGG+TGG - chr6.2:89087177-89087196 None:intergenic 50.0%
TCCAGTAAAGCCACACCTGA+AGG - chr6.2:89087571-89087590 None:intergenic 50.0%
TGAAACAGGAGGATACGGCA+AGG + chr6.2:89087761-89087780 MS.gene030278:CDS 50.0%
TGACGTGGTTCCAAGAGAAG+AGG - chr6.2:89087433-89087452 None:intergenic 50.0%
TGATGGGAAGGAGTTGGGTT+AGG - chr6.2:89087030-89087049 None:intergenic 50.0%
! GAAGGAGTTGGGTTAGGGTT+AGG - chr6.2:89087024-89087043 None:intergenic 50.0%
! GAAGGATGCAGCACTGAAAG+CGG + chr6.2:89087513-89087532 MS.gene030278:CDS 50.0%
! GCATGGATGGTATGGTGGAA+AGG - chr6.2:89087172-89087191 None:intergenic 50.0%
! GGATGGTATGGTGGAAAGGA+AGG - chr6.2:89087168-89087187 None:intergenic 50.0%
! GTGGCTTTACTGGATTCACG+TGG + chr6.2:89087577-89087596 MS.gene030278:CDS 50.0%
! GTGGCTTTTATTGTCGGTGC+CGG + chr6.2:89087673-89087692 MS.gene030278:CDS 50.0%
! GTTGGTGGAGAAAGAGGATG+CGG + chr6.2:89087735-89087754 MS.gene030278:CDS 50.0%
!! TTTATTGTCGGTGCCGGAGA+CGG + chr6.2:89087679-89087698 MS.gene030278:CDS 50.0%
AAGGTGCAGCGGATACAGCA+AGG - chr6.2:89087249-89087268 None:intergenic 55.0%
ACCGGAGATTCCAACAGCGA+CGG - chr6.2:89087110-89087129 None:intergenic 55.0%
AGAGGATGCGGTGGTGAAAC+AGG + chr6.2:89087747-89087766 MS.gene030278:CDS 55.0%
AGTGCTGCATCCTTCAGGTG+TGG - chr6.2:89087508-89087527 None:intergenic 55.0%
CAGTAACTCGCCTTCAGGTG+TGG + chr6.2:89087558-89087577 MS.gene030278:CDS 55.0%
CCGTACAGTAACTCGCCTTC+AGG + chr6.2:89087553-89087572 MS.gene030278:CDS 55.0%
CTTCAAGAAATCCGTGGCGC+CGG + chr6.2:89087289-89087308 MS.gene030278:CDS 55.0%
GACGCCGATGAAGATTCGAC+CGG - chr6.2:89087128-89087147 None:intergenic 55.0%
GACGGCGGCAACGTGAAATT+TGG - chr6.2:89087092-89087111 None:intergenic 55.0%
GGCGGAGTATGGAGAATTGG+TGG + chr6.2:89087705-89087724 MS.gene030278:CDS 55.0%
TGCGGCGGAGTATGGAGAAT+TGG + chr6.2:89087702-89087721 MS.gene030278:CDS 55.0%
! AGGGACACGGGCTAATGGTT+GGG - chr6.2:89087065-89087084 None:intergenic 55.0%
! ATTGGTGGAAGCGGTGTTGG+TGG + chr6.2:89087720-89087739 MS.gene030278:CDS 55.0%
! GAGATAGGGACACGGGCTAA+TGG - chr6.2:89087070-89087089 None:intergenic 55.0%
! GCCTTCAGGTGTGGCTTTAC+TGG + chr6.2:89087567-89087586 MS.gene030278:CDS 55.0%
! TAGGGACACGGGCTAATGGT+TGG - chr6.2:89087066-89087085 None:intergenic 55.0%
!! AGCGGTGTTGGTGGAGAAAG+AGG + chr6.2:89087729-89087748 MS.gene030278:CDS 55.0%
AACTGGCGGCAATGGCCACA+AGG - chr6.2:89087268-89087287 None:intergenic 60.0%
GAGGAATATCTCCGGCGCCA+CGG - chr6.2:89087303-89087322 None:intergenic 60.0%
GCAATGGCCACAAGGTGCAG+CGG - chr6.2:89087260-89087279 None:intergenic 60.0%
GCCACCAAAGCAGCCTGAAC+CGG - chr6.2:89087658-89087677 None:intergenic 60.0%
GCCGTCGCTGTTGGAATCTC+CGG + chr6.2:89087106-89087125 MS.gene030278:CDS 60.0%
GCTGTATCCGCTGCACCTTG+TGG + chr6.2:89087250-89087269 MS.gene030278:CDS 60.0%
GGAGATTCCAACAGCGACGG+CGG - chr6.2:89087107-89087126 None:intergenic 60.0%
GGATGCGGTGGTGAAACAGG+AGG + chr6.2:89087750-89087769 MS.gene030278:CDS 60.0%
GGTGGAGAAAGAGGATGCGG+TGG + chr6.2:89087738-89087757 MS.gene030278:CDS 60.0%
! ACCGGTTCAGGCTGCTTTGG+TGG + chr6.2:89087654-89087673 MS.gene030278:CDS 60.0%
! TCCTAGCATGGGACCGGTTC+AGG + chr6.2:89087642-89087661 MS.gene030278:CDS 60.0%
ATACTCCGCCGCACCGTCTC+CGG - chr6.2:89087695-89087714 None:intergenic 65.0%
GCCTGAACCGGTCCCATGCT+AGG - chr6.2:89087646-89087665 None:intergenic 65.0%
! GGGACCGGTTCAGGCTGCTT+TGG + chr6.2:89087651-89087670 MS.gene030278:CDS 65.0%
CACGTTGCCGCCGTCGCTGT+TGG + chr6.2:89087097-89087116 MS.gene030278:CDS 70.0%
GGAGACGGTGCGGCGGAGTA+TGG + chr6.2:89087694-89087713 MS.gene030278:CDS 70.0%
!! TGTCGGTGCCGGAGACGGTG+CGG + chr6.2:89087684-89087703 MS.gene030278:CDS 70.0%
!! CGGTGCCGGAGACGGTGCGG+CGG + chr6.2:89087687-89087706 MS.gene030278:CDS 80.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 89086959 89087858 89086959 ID=MS.gene030278
chr6.2 mRNA 89086959 89087858 89086959 ID=MS.gene030278.t1;Parent=MS.gene030278
chr6.2 exon 89086959 89087858 89086959 ID=MS.gene030278.t1.exon1;Parent=MS.gene030278.t1
chr6.2 CDS 89086959 89087858 89086959 ID=cds.MS.gene030278.t1;Parent=MS.gene030278.t1
Gene Sequence

>MS.gene030278

ATGGAAGAACCTAAATTCATAATAGAAGCATCAGAAGCAAAATCATTAACCCAATCAACAAACCTAACCCTAACCCAACTCCTTCCCATCATTGTCAAATCATCCCAACCATTAGCCCGTGTCCCTATCTCCAAATTTCACGTTGCCGCCGTCGCTGTTGGAATCTCCGGTCGAATCTTCATCGGCGTCAACGTCGAATTCCCTAACCTTCCTTTCCACCATACCATCCATGCTGAACAGTTTCTCTTAACAAACCTTTTTCATAACAAAGAAACTCAAATTCAATACCTTGCTGTATCCGCTGCACCTTGTGGCCATTGCCGCCAGTTTCTTCAAGAAATCCGTGGCGCCGGAGATATTCCTCTCCTCATAACATCTGATTCGAAGAAAACTGCGAAAAATGAGTTTACATCTCTTTCTGAATTCCTTTCTCATCCCTTTGGTCCTCATGATCTTCTTCCTAAACATGTTCCTCTTCTCTTGGAACCACGTCACAATGATTTGTGTTTTATAGAAATAGAAGGTTCGATCACAAATTCAATAAAGCCACACCTGAAGGATGCAGCACTGAAAGCGGCGAATGAATCACATGCGCCGTACAGTAACTCGCCTTCAGGTGTGGCTTTACTGGATTCACGTGGGAATGTTTATAAAGGTAGTTATATGGAATCTGCAGCTTATAATCCTAGCATGGGACCGGTTCAGGCTGCTTTGGTGGCTTTTATTGTCGGTGCCGGAGACGGTGCGGCGGAGTATGGAGAATTGGTGGAAGCGGTGTTGGTGGAGAAAGAGGATGCGGTGGTGAAACAGGAGGATACGGCAAGGCTGTTTCTTAGGTCCATCGCACCTCAATGTAGCTTCAATGTGGTTCTTTGCACTTCTAATAATAAATCTAATTGA
Protein sequence

>MS.gene030278.t1

MEEPKFIIEASEAKSLTQSTNLTLTQLLPIIVKSSQPLARVPISKFHVAAVAVGISGRIFIGVNVEFPNLPFHHTIHAEQFLLTNLFHNKETQIQYLAVSAAPCGHCRQFLQEIRGAGDIPLLITSDSKKTAKNEFTSLSEFLSHPFGPHDLLPKHVPLLLEPRHNDLCFIEIEGSITNSIKPHLKDAALKAANESHAPYSNSPSGVALLDSRGNVYKGSYMESAAYNPSMGPVQAALVAFIVGAGDGAAEYGELVEAVLVEKEDAVVKQEDTARLFLRSIAPQCSFNVVLCTSNNKSN