Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048972.t1 | KEH21288.1 | 95 | 580 | 25 | 2 | 1 | 576 | 1 | 580 | 0.00E+00 | 1130.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048972.t1 | Q9SU50 | 58.6 | 553 | 224 | 4 | 27 | 575 | 74 | 625 | 3.7e-193 | 676.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048972.t1 | A0A072TWM8 | 95.0 | 580 | 25 | 2 | 1 | 576 | 1 | 580 | 0.0e+00 | 1130.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene20170 | MS.gene048972 | PPI |
| MS.gene06185 | MS.gene048972 | PPI |
| MS.gene048972 | MS.gene049012 | PPI |
| MS.gene048972 | MS.gene55873 | PPI |
| MS.gene048972 | MS.gene030278 | PPI |
| MS.gene66304 | MS.gene048972 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048972.t1 | MTR_8g099985 | 94.483 | 580 | 28 | 1 | 1 | 576 | 1 | 580 | 0.0 | 1120 |
| MS.gene048972.t1 | MTR_8g099985 | 97.101 | 552 | 16 | 0 | 25 | 576 | 2 | 553 | 0.0 | 1115 |
| MS.gene048972.t1 | MTR_8g099985 | 94.310 | 580 | 28 | 2 | 1 | 576 | 1 | 579 | 0.0 | 1113 |
| MS.gene048972.t1 | MTR_8g099985 | 96.920 | 552 | 16 | 1 | 25 | 576 | 2 | 552 | 0.0 | 1108 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene048972.t1 | AT4G24040 | 57.645 | 569 | 233 | 5 | 15 | 576 | 59 | 626 | 0.0 | 655 |
Find 141 sgRNAs with CRISPR-Local
Find 297 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATAAATCATAGCGCTTAAA+AGG | 0.150099 | 4.1:+4117396 | None:intergenic |
| GGGATTCCTACTGGGTAATT+AGG | 0.188185 | 4.1:-4118528 | MS.gene048972:intron |
| GTGGAACATTGCGGAGAATT+TGG | 0.215201 | 4.1:-4115072 | MS.gene048972:CDS |
| CATACTCTGCTTCCTGTTCC+TGG | 0.232512 | 4.1:-4118595 | MS.gene048972:CDS |
| CCTTGCATAATAGCGATTTA+AGG | 0.232755 | 4.1:+4117121 | None:intergenic |
| GCAACTTCTTTGAGTGATTC+AGG | 0.233453 | 4.1:-4115409 | MS.gene048972:CDS |
| GCCTTCTTTGCAAATGTTAC+TGG | 0.243160 | 4.1:-4116516 | MS.gene048972:CDS |
| CGATTAAGGTTCATTCTCTT+TGG | 0.245075 | 4.1:-4118669 | MS.gene048972:CDS |
| CTGGCATTCTTGGAGGAGTT+TGG | 0.263221 | 4.1:-4114779 | MS.gene048972:CDS |
| GGAAGCAGAGTATGGTAGTT+AGG | 0.277116 | 4.1:+4118604 | None:intergenic |
| TATACATAAAGTGAACATTT+TGG | 0.278583 | 4.1:-4117165 | MS.gene048972:CDS |
| TCGAGGATTTAGGAAGATTC+TGG | 0.291598 | 4.1:+4118845 | None:intergenic |
| CACACCATTGTGGACGATTC+TGG | 0.297697 | 4.1:+4117083 | None:intergenic |
| TGGCATTCTTGGAGGAGTTT+GGG | 0.304022 | 4.1:-4114778 | MS.gene048972:CDS |
| ATTGGTTGTGATCCATCTTA+TGG | 0.308508 | 4.1:+4115140 | None:intergenic |
| ACTGAACCAGTCGAGGATTT+AGG | 0.309319 | 4.1:+4118835 | None:intergenic |
| TGGAGTTGTGCTGGCATTCT+TGG | 0.309506 | 4.1:-4114789 | MS.gene048972:CDS |
| TTCTAACATCGGAAATTTGC+AGG | 0.312438 | 4.1:+4116469 | None:intergenic |
| ATTGCAATGCAGACTGGTTT+TGG | 0.312604 | 4.1:-4114821 | MS.gene048972:intron |
| ATTGTGGACGATTCTGGCCT+TGG | 0.323742 | 4.1:+4117089 | None:intergenic |
| CATCCACAAAGGAACAAAAT+TGG | 0.326919 | 4.1:+4116234 | None:intergenic |
| CTTCCAGAAGGTTCAAGTTT+GGG | 0.328084 | 4.1:-4116290 | MS.gene048972:intron |
| TACTGAAAGAGCACGAGTTT+TGG | 0.328407 | 4.1:-4117319 | MS.gene048972:CDS |
| ACTTCCAGAAGGTTCAAGTT+TGG | 0.328806 | 4.1:-4116291 | MS.gene048972:intron |
| TCATGAATACCTGAGTAAAA+TGG | 0.329622 | 4.1:+4116208 | None:intergenic |
| TCTGGCCTGCTTCGTGCTGC+TGG | 0.332816 | 4.1:-4115436 | MS.gene048972:CDS |
| GGTCAGAGCATGGGCGATTA+AGG | 0.337495 | 4.1:-4118683 | MS.gene048972:CDS |
| TGAACCAATGGCTTGATTCC+TGG | 0.337512 | 4.1:-4116410 | MS.gene048972:CDS |
| GAATACGGGTTTGTGCTTAA+TGG | 0.346920 | 4.1:-4118243 | MS.gene048972:CDS |
| GTTGAAGGCCTTGTAAAATC+AGG | 0.348652 | 4.1:-4115198 | MS.gene048972:CDS |
| GTGATATAGAATTAGTTAAA+AGG | 0.354626 | 4.1:-4117355 | MS.gene048972:CDS |
| CAAATGTTACTGGAGATAAT+AGG | 0.358114 | 4.1:-4116506 | MS.gene048972:CDS |
| GATTTAAATGCATTTCTACT+TGG | 0.364005 | 4.1:-4116642 | MS.gene048972:CDS |
| CTAGCATCAGCTGCTGAATC+AGG | 0.368826 | 4.1:-4116927 | MS.gene048972:CDS |
| AGGCATCTGCTTCCAAGTTC+AGG | 0.372013 | 4.1:-4116983 | MS.gene048972:CDS |
| ATCGCCCATGCTCTGACCTC+AGG | 0.375305 | 4.1:+4118688 | None:intergenic |
| CCTGGTTCTGTTGTTATCCC+TGG | 0.380817 | 4.1:-4118577 | MS.gene048972:CDS |
| CAATCTCATTTCATTGATTG+AGG | 0.383699 | 4.1:-4118265 | MS.gene048972:CDS |
| AGAAATGCATTTAAATCAAC+AGG | 0.395594 | 4.1:+4116648 | None:intergenic |
| ATTTCATTGATTGAGGAATA+CGG | 0.395655 | 4.1:-4118258 | MS.gene048972:CDS |
| TCCAGTAACATTTGCAAAGA+AGG | 0.405233 | 4.1:+4116515 | None:intergenic |
| CAGGAACAGGAAGCAGAGTA+TGG | 0.406552 | 4.1:+4118596 | None:intergenic |
| GTAGACAATGTTGTGAAGTT+AGG | 0.407549 | 4.1:+4116684 | None:intergenic |
| TACAGTGACAGCATCAACTA+TGG | 0.410643 | 4.1:-4119019 | MS.gene048972:CDS |
| ATTTAAATGCATTTCTACTT+GGG | 0.415801 | 4.1:-4116641 | MS.gene048972:CDS |
| TATATTACTGGGATTCCTAC+TGG | 0.417297 | 4.1:-4118537 | MS.gene048972:CDS |
| AGCGTGATCCGTATCGGAAA+GGG | 0.420355 | 4.1:+4118870 | None:intergenic |
| GATTTCGTGAAGTATATTAC+TGG | 0.429451 | 4.1:-4118549 | MS.gene048972:CDS |
| GCAAATTTCCGATGTTAGAA+AGG | 0.431097 | 4.1:-4116466 | MS.gene048972:CDS |
| CTAGAGCATACTACACTAAC+AGG | 0.433578 | 4.1:-4118218 | MS.gene048972:CDS |
| CTCAATCAATGAAATGAGAT+TGG | 0.439063 | 4.1:+4118266 | None:intergenic |
| GAAGTGGAGCCCAACCATTC+GGG | 0.440275 | 4.1:+4115232 | None:intergenic |
| CTTCAACACATGTTAGTTGA+AGG | 0.440568 | 4.1:-4115213 | MS.gene048972:CDS |
| TGAAGTGGAGCCCAACCATT+CGG | 0.445190 | 4.1:+4115231 | None:intergenic |
| ATAAATCATAGCGCTTAAAA+GGG | 0.448110 | 4.1:+4117397 | None:intergenic |
| TTCTGAAACAGTCCTGAACT+TGG | 0.449107 | 4.1:+4116971 | None:intergenic |
| GAAGCAGAGTATGGTAGTTA+GGG | 0.453589 | 4.1:+4118605 | None:intergenic |
| GGCTCAGGGACAAAATCCTC+TGG | 0.464693 | 4.1:+4118739 | None:intergenic |
| ACTTCACGAAATCGCGAACC+AGG | 0.465854 | 4.1:+4118559 | None:intergenic |
| AAGGATACGAGTGGAGTTGA+AGG | 0.466489 | 4.1:+4118982 | None:intergenic |
| CTCGAAAGTCTCAAAACCTC+TGG | 0.471532 | 4.1:-4115454 | MS.gene048972:CDS |
| CTGAAGAAATTGCCATAAGA+TGG | 0.477213 | 4.1:-4115152 | MS.gene048972:CDS |
| TTTCATTGATTGAGGAATAC+GGG | 0.491455 | 4.1:-4118257 | MS.gene048972:CDS |
| TAGGGACTTCCCGAATGGTT+GGG | 0.494523 | 4.1:-4115241 | MS.gene048972:CDS |
| ATAACAACAGAACCAGGAAC+AGG | 0.502133 | 4.1:+4118583 | None:intergenic |
| CTGGAAAGCGTGATCCGTAT+CGG | 0.508838 | 4.1:+4118864 | None:intergenic |
| CTGGTCAAATGGAGTTGTGC+TGG | 0.514815 | 4.1:-4114798 | MS.gene048972:CDS |
| CATTCTTGGAGGAGTTTGGG+TGG | 0.515798 | 4.1:-4114775 | MS.gene048972:CDS |
| TGCGGAGAATTTGGAGGTGG+GGG | 0.515962 | 4.1:-4115063 | MS.gene048972:CDS |
| TTGAAGGCCTTGTAAAATCA+GGG | 0.517177 | 4.1:-4115197 | MS.gene048972:CDS |
| TCGTGCTCTTTCAGTAGTGC+AGG | 0.522605 | 4.1:+4117326 | None:intergenic |
| CAGCAGCTGATGCTAGTTCA+CGG | 0.526218 | 4.1:+4116934 | None:intergenic |
| CAACTCCAGCAGCACGAAGC+AGG | 0.532599 | 4.1:+4115431 | None:intergenic |
| GACAATGTTGTGAAGTTAGG+AGG | 0.536747 | 4.1:+4116687 | None:intergenic |
| CACACCGCATTCAACACATT+CGG | 0.536936 | 4.1:-4118943 | MS.gene048972:CDS |
| ATAGGGACTTCCCGAATGGT+TGG | 0.537673 | 4.1:-4115242 | MS.gene048972:intron |
| AATTGCCTCCTTTCTAACAT+CGG | 0.541772 | 4.1:+4116458 | None:intergenic |
| TTTAAATGCATTTCTACTTG+GGG | 0.544167 | 4.1:-4116640 | MS.gene048972:intron |
| AGCAGCACGAAGCAGGCCAG+AGG | 0.544937 | 4.1:+4115438 | None:intergenic |
| TCAACTAACATGTGTTGAAG+TGG | 0.545752 | 4.1:+4115216 | None:intergenic |
| CATCAGCTGCTGAATCAGGA+TGG | 0.547532 | 4.1:-4116923 | MS.gene048972:CDS |
| ATTTCGTGAAGTATATTACT+GGG | 0.547731 | 4.1:-4118548 | MS.gene048972:CDS |
| CATTGCGGAGAATTTGGAGG+TGG | 0.549996 | 4.1:-4115066 | MS.gene048972:CDS |
| AGGCCTTGTAAAATCAGGGT+TGG | 0.550849 | 4.1:-4115193 | MS.gene048972:CDS |
| TAGCGCTTAAAAGGGGAGGC+TGG | 0.552660 | 4.1:+4117405 | None:intergenic |
| TAGAAAGGAGGCAATTAACT+CGG | 0.554148 | 4.1:-4116451 | MS.gene048972:CDS |
| TCGCCCATGCTCTGACCTCA+GGG | 0.556142 | 4.1:+4118689 | None:intergenic |
| ACAATGTTGTGAAGTTAGGA+GGG | 0.558386 | 4.1:+4116688 | None:intergenic |
| AGTTGTGCTGGCATTCTTGG+AGG | 0.560594 | 4.1:-4114786 | MS.gene048972:CDS |
| GTGTTGGAGAATTTCGAGAA+AGG | 0.563419 | 4.1:+4118963 | None:intergenic |
| CCAGGGATAACAACAGAACC+AGG | 0.567138 | 4.1:+4118577 | None:intergenic |
| GAACATTGCGGAGAATTTGG+AGG | 0.573813 | 4.1:-4115069 | MS.gene048972:CDS |
| GATGGGATTTCAGCACAAGA+TGG | 0.574741 | 4.1:-4116905 | MS.gene048972:CDS |
| TGAGCCAGGAATCAAGCCAT+TGG | 0.576256 | 4.1:+4116406 | None:intergenic |
| ATGTGTGGTATTGCTGAGCC+AGG | 0.578031 | 4.1:+4116392 | None:intergenic |
| ATATTACTGGGATTCCTACT+GGG | 0.578376 | 4.1:-4118536 | MS.gene048972:CDS |
| TGCAATAGGGACTTCCCGAA+TGG | 0.582422 | 4.1:-4115246 | MS.gene048972:intron |
| ACGCTAAGCAGCAATGGCCA+AGG | 0.586201 | 4.1:-4119079 | None:intergenic |
| AAGCGTGATCCGTATCGGAA+AGG | 0.588837 | 4.1:+4118869 | None:intergenic |
| GCGTGATCCGTATCGGAAAG+GGG | 0.591271 | 4.1:+4118871 | None:intergenic |
| ATCAGCTGCTGAATCAGGAT+GGG | 0.594438 | 4.1:-4116922 | MS.gene048972:CDS |
| AAACCCTGAGGTCAGAGCAT+GGG | 0.598300 | 4.1:-4118692 | MS.gene048972:CDS |
| AATCTTCCTAAATCCTCGAC+TGG | 0.599150 | 4.1:-4118841 | MS.gene048972:CDS |
| CCTTAAATCGCTATTATGCA+AGG | 0.603776 | 4.1:-4117121 | MS.gene048972:CDS |
| AAAACCCTGAGGTCAGAGCA+TGG | 0.605362 | 4.1:-4118693 | MS.gene048972:CDS |
| AACGGACACTGAACCAGTCG+AGG | 0.607852 | 4.1:+4118828 | None:intergenic |
| ATTGCGGAGAATTTGGAGGT+GGG | 0.609969 | 4.1:-4115065 | MS.gene048972:CDS |
| TATGAGATATACGCTAGGAC+TGG | 0.610537 | 4.1:-4117377 | MS.gene048972:CDS |
| GGAATGCAAACATGAACCAA+TGG | 0.611077 | 4.1:-4116422 | MS.gene048972:CDS |
| GTTGGAAGAAGCAAGGTCGT+TGG | 0.612218 | 4.1:-4115175 | MS.gene048972:CDS |
| AAAACGATTCAAATCATGAA+CGG | 0.617469 | 4.1:+4118810 | None:intergenic |
| ATCATAGCGCTTAAAAGGGG+AGG | 0.618174 | 4.1:+4117401 | None:intergenic |
| AATTTCCGATGTTAGAAAGG+AGG | 0.620169 | 4.1:-4116463 | MS.gene048972:CDS |
| TTGCGGAGAATTTGGAGGTG+GGG | 0.625168 | 4.1:-4115064 | MS.gene048972:CDS |
| ATGTGTTGAATGCGGTGTGT+TGG | 0.625546 | 4.1:+4118947 | None:intergenic |
| ATTTCAGCACAAGATGGATG+AGG | 0.627854 | 4.1:-4116899 | MS.gene048972:intron |
| TTTGAGAGGTAAATCGACGT+AGG | 0.628012 | 4.1:+4118897 | None:intergenic |
| ATGCAAGGTGGGACAAACCA+AGG | 0.631432 | 4.1:-4117106 | MS.gene048972:CDS |
| TGATTTATGAGATATACGCT+AGG | 0.633128 | 4.1:-4117382 | MS.gene048972:CDS |
| ATTTCGAGAAAGGATACGAG+TGG | 0.636358 | 4.1:+4118973 | None:intergenic |
| ACATACCACACACACCATTG+TGG | 0.636727 | 4.1:+4117073 | None:intergenic |
| AAATCGCTATTATGCAAGGT+GGG | 0.639450 | 4.1:-4117117 | MS.gene048972:CDS |
| CTTCACGAAATCGCGAACCA+GGG | 0.640218 | 4.1:+4118560 | None:intergenic |
| TAAATCGCTATTATGCAAGG+TGG | 0.642260 | 4.1:-4117118 | MS.gene048972:CDS |
| TAAATCATAGCGCTTAAAAG+GGG | 0.643981 | 4.1:+4117398 | None:intergenic |
| AAGTTTGACGTGGAACATTG+CGG | 0.648225 | 4.1:-4115081 | MS.gene048972:CDS |
| TAAAATGGCTTCATCCACAA+AGG | 0.649607 | 4.1:+4116223 | None:intergenic |
| AACAAACCTAATTACCCAGT+AGG | 0.651976 | 4.1:+4118522 | None:intergenic |
| TGAGTGATTCAGGACAGCAG+TGG | 0.659605 | 4.1:-4115399 | MS.gene048972:intron |
| AGTTGATGCTGTCACTGTAA+CGG | 0.661317 | 4.1:+4119023 | None:intergenic |
| AATCAGGGTTGGAAGAAGCA+AGG | 0.661754 | 4.1:-4115182 | MS.gene048972:CDS |
| ACTTGAAAATACCTCATGTG+TGG | 0.670842 | 4.1:+4116377 | None:intergenic |
| CGTGATCCGTATCGGAAAGG+GGG | 0.673238 | 4.1:+4118872 | None:intergenic |
| TCTCGTGTACTCTGATCCAG+AGG | 0.686829 | 4.1:-4118755 | MS.gene048972:CDS |
| AAGGCCAGAATCGTCCACAA+TGG | 0.691379 | 4.1:-4117087 | MS.gene048972:intron |
| GCTCAGCAATACCACACATG+AGG | 0.698303 | 4.1:-4116388 | MS.gene048972:intron |
| GAGCATACTACACTAACAGG+AGG | 0.711397 | 4.1:-4118215 | MS.gene048972:intron |
| AATGCATGAAAAGTTTGACG+TGG | 0.715752 | 4.1:-4115091 | MS.gene048972:CDS |
| AGGGTGAGTCTTGACCTCAG+TGG | 0.753249 | 4.1:+4118624 | None:intergenic |
| ATTGCCGAATGTGTTGAATG+CGG | 0.761724 | 4.1:+4118939 | None:intergenic |
| GAGTAGGAAAGTATCCACTG+AGG | 0.796738 | 4.1:-4118638 | MS.gene048972:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACAAAACAAATTCAAAA+AGG | + | chr4.1:4116070-4116089 | None:intergenic | 15.0% |
| !! | AATATTTAATGTTCAACTTT+GGG | - | chr4.1:4116788-4116807 | MS.gene048972:intron | 15.0% |
| !! | AGATATATTGAAAATATACT+AGG | + | chr4.1:4118902-4118921 | None:intergenic | 15.0% |
| !! | ATATTATTTCATTTATACCT+CGG | + | chr4.1:4116773-4116792 | None:intergenic | 15.0% |
| !! | TAATATTTAATGTTCAACTT+TGG | - | chr4.1:4116787-4116806 | MS.gene048972:intron | 15.0% |
| !!! | GTCATTTATTGATTTATAAT+AGG | - | chr4.1:4118080-4118099 | MS.gene048972:intron | 15.0% |
| !!! | TTTATAGAAACTTATTTTGA+TGG | - | chr4.1:4115024-4115043 | MS.gene048972:intron | 15.0% |
| !!! | TTTATTGATTTATAATAGGA+AGG | - | chr4.1:4118084-4118103 | MS.gene048972:intron | 15.0% |
| !!! | TTTTTTGTAAACGATATAAT+TGG | + | chr4.1:4118695-4118714 | None:intergenic | 15.0% |
| !! | AAAAAAAATAAGTGCAGAAA+AGG | + | chr4.1:4116176-4116195 | None:intergenic | 20.0% |
| !! | AGTATTCAACTTTAAACATT+TGG | - | chr4.1:4117851-4117870 | MS.gene048972:intron | 20.0% |
| !! | ATAGAATGCTAAATAATTTG+AGG | - | chr4.1:4117874-4117893 | MS.gene048972:intron | 20.0% |
| !! | ATATTAAGCATATAGACTTA+AGG | + | chr4.1:4117926-4117945 | None:intergenic | 20.0% |
| !! | ATCAGTTAAAATTAAAATGC+TGG | + | chr4.1:4115674-4115693 | None:intergenic | 20.0% |
| !! | ATTTAAATGCATTTCTACTT+GGG | - | chr4.1:4117173-4117192 | MS.gene048972:intron | 20.0% |
| !! | ATTTAGATGACTCATATATA+AGG | + | chr4.1:4116946-4116965 | None:intergenic | 20.0% |
| !! | GATATGTTAAAAAGAATTTC+AGG | - | chr4.1:4118274-4118293 | MS.gene048972:CDS | 20.0% |
| !! | GTGATATAGAATTAGTTAAA+AGG | - | chr4.1:4116459-4116478 | MS.gene048972:CDS | 20.0% |
| !! | TAAAATGTATGAAAAATCCT+TGG | + | chr4.1:4114755-4114774 | None:intergenic | 20.0% |
| !! | TATATCGTTTACAAAAAAAC+AGG | - | chr4.1:4118697-4118716 | MS.gene048972:CDS | 20.0% |
| !! | TCAGTTAAAATTAAAATGCT+GGG | + | chr4.1:4115673-4115692 | None:intergenic | 20.0% |
| !!! | AACTTTTTTCTACATATGTA+GGG | - | chr4.1:4118479-4118498 | MS.gene048972:intron | 20.0% |
| !!! | ATAATTAGTTTGATTGCAAA+AGG | + | chr4.1:4116311-4116330 | None:intergenic | 20.0% |
| !!! | ATCATTTCTGTTTTTATCTT+TGG | - | chr4.1:4115471-4115490 | MS.gene048972:CDS | 20.0% |
| !!! | TACTTTATCATTGTGATTTT+TGG | - | chr4.1:4118813-4118832 | MS.gene048972:CDS | 20.0% |
| !!! | TATACATAAAGTGAACATTT+TGG | - | chr4.1:4116649-4116668 | MS.gene048972:CDS | 20.0% |
| !!! | TTCTGTTATTTGAACAAATA+AGG | - | chr4.1:4115337-4115356 | MS.gene048972:intron | 20.0% |
| ! | AAAACGATTCAAATCATGAA+CGG | + | chr4.1:4115007-4115026 | None:intergenic | 25.0% |
| ! | AAAGGTAAAACAATGAACAT+GGG | + | chr4.1:4116615-4116634 | None:intergenic | 25.0% |
| ! | AAATTACAGAAAGTAATAGC+AGG | + | chr4.1:4115628-4115647 | None:intergenic | 25.0% |
| ! | AAGATAAAGTCATTGTGTAA+AGG | + | chr4.1:4118247-4118266 | None:intergenic | 25.0% |
| ! | AATAAACTCACAAGTGATAT+AGG | + | chr4.1:4116548-4116567 | None:intergenic | 25.0% |
| ! | AATCAATAATAAGTCATGGA+TGG | + | chr4.1:4117813-4117832 | None:intergenic | 25.0% |
| ! | AATTACAGAAAGTAATAGCA+GGG | + | chr4.1:4115627-4115646 | None:intergenic | 25.0% |
| ! | ACAACCAATATTAGAAACTT+GGG | + | chr4.1:4115445-4115464 | None:intergenic | 25.0% |
| ! | ACTTGTATAAATCTACCATA+TGG | - | chr4.1:4117463-4117482 | MS.gene048972:intron | 25.0% |
| ! | ACTTGTGAGTTTATTATCTA+AGG | - | chr4.1:4116553-4116572 | MS.gene048972:intron | 25.0% |
| ! | AGAAATGCATTTAAATCAAC+AGG | + | chr4.1:4117169-4117188 | None:intergenic | 25.0% |
| ! | AGTTAAAATTAAAATGCTGG+GGG | + | chr4.1:4115671-4115690 | None:intergenic | 25.0% |
| ! | ATAAATCATAGCGCTTAAAA+GGG | + | chr4.1:4116420-4116439 | None:intergenic | 25.0% |
| ! | ATAGTTAACACAGTTCAAAT+AGG | + | chr4.1:4115408-4115427 | None:intergenic | 25.0% |
| ! | ATGCATATCTATGGAAAATT+AGG | - | chr4.1:4117748-4117767 | MS.gene048972:intron | 25.0% |
| ! | ATGTAATCGATATATGTTTG+TGG | + | chr4.1:4118211-4118230 | None:intergenic | 25.0% |
| ! | ATTTCGTGAAGTATATTACT+GGG | - | chr4.1:4115266-4115285 | MS.gene048972:intron | 25.0% |
| ! | CAGTTAAAATTAAAATGCTG+GGG | + | chr4.1:4115672-4115691 | None:intergenic | 25.0% |
| ! | CATCTAAATGTGTGTTTATT+AGG | - | chr4.1:4116957-4116976 | MS.gene048972:CDS | 25.0% |
| ! | CTTGTATAAATCTACCATAT+GGG | - | chr4.1:4117464-4117483 | MS.gene048972:intron | 25.0% |
| ! | GATTTAAATGCATTTCTACT+TGG | - | chr4.1:4117172-4117191 | MS.gene048972:intron | 25.0% |
| ! | GTTATATGATCTCAAATCAA+AGG | + | chr4.1:4115917-4115936 | None:intergenic | 25.0% |
| ! | TAACTGTGTTAATAAACTTC+AGG | + | chr4.1:4117716-4117735 | None:intergenic | 25.0% |
| ! | TACAACCAATATTAGAAACT+TGG | + | chr4.1:4115446-4115465 | None:intergenic | 25.0% |
| ! | TATATCTATAAGACGATGAA+AGG | + | chr4.1:4116633-4116652 | None:intergenic | 25.0% |
| ! | TCACAATCAATAATAAGTCA+TGG | + | chr4.1:4117817-4117836 | None:intergenic | 25.0% |
| ! | TTGTATAAATCTACCATATG+GGG | - | chr4.1:4117465-4117484 | MS.gene048972:intron | 25.0% |
| ! | TTTAAATGCATTTCTACTTG+GGG | - | chr4.1:4117174-4117193 | MS.gene048972:intron | 25.0% |
| !! | ACGTGTATTCTTATTTCAAA+GGG | - | chr4.1:4118925-4118944 | MS.gene048972:CDS | 25.0% |
| !! | AGTAATAAGCAATTTGGAAT+TGG | - | chr4.1:4118440-4118459 | MS.gene048972:intron | 25.0% |
| !! | ATTTCATTGATTGAGGAATA+CGG | - | chr4.1:4115556-4115575 | MS.gene048972:intron | 25.0% |
| !! | GTAATTTTATCCATTGTCAT+TGG | - | chr4.1:4115641-4115660 | MS.gene048972:intron | 25.0% |
| !! | GTTCATGATTTTCTATTCAA+CGG | - | chr4.1:4118030-4118049 | MS.gene048972:intron | 25.0% |
| !! | TACGTGTATTCTTATTTCAA+AGG | - | chr4.1:4118924-4118943 | MS.gene048972:CDS | 25.0% |
| !! | TCAAAGGTGTAGATTATTTA+AGG | + | chr4.1:4115901-4115920 | None:intergenic | 25.0% |
| !! | TGTTTGAAAGTGCAAAAATT+AGG | + | chr4.1:4116354-4116373 | None:intergenic | 25.0% |
| !!! | AAGCAAATACATTTTGATTC+TGG | + | chr4.1:4117560-4117579 | None:intergenic | 25.0% |
| !!! | ACTATTTTGAGAGTTATTCA+CGG | + | chr4.1:4115988-4116007 | None:intergenic | 25.0% |
| !!! | GAACTTTTTTCTACATATGT+AGG | - | chr4.1:4118478-4118497 | MS.gene048972:intron | 25.0% |
| !!! | GTTTTTATCTTTGGTTTTCA+GGG | - | chr4.1:4115480-4115499 | MS.gene048972:CDS | 25.0% |
| !!! | TGTTTTTATCTTTGGTTTTC+AGG | - | chr4.1:4115479-4115498 | MS.gene048972:CDS | 25.0% |
| !!! | TTTTTATCTTTGGTTTTCAG+GGG | - | chr4.1:4115481-4115500 | MS.gene048972:intron | 25.0% |
| AACTGATACTAGAGTTAATG+TGG | + | chr4.1:4117640-4117659 | None:intergenic | 30.0% | |
| ACAAATCGATCTCAAATGAA+TGG | + | chr4.1:4115859-4115878 | None:intergenic | 30.0% | |
| ACTCATATGAAACTTGCAAT+AGG | - | chr4.1:4118554-4118573 | MS.gene048972:CDS | 30.0% | |
| AGAATAAGATACTGCTAATG+TGG | - | chr4.1:4115749-4115768 | MS.gene048972:intron | 30.0% | |
| CAAATGTTACTGGAGATAAT+AGG | - | chr4.1:4117308-4117327 | MS.gene048972:intron | 30.0% | |
| CAGAAACAAAAGAGTAAGAA+AGG | + | chr4.1:4115322-4115341 | None:intergenic | 30.0% | |
| CATAAATCATAGCGCTTAAA+AGG | + | chr4.1:4116421-4116440 | None:intergenic | 30.0% | |
| CTATGGAAAATTAGGAACTT+AGG | - | chr4.1:4117756-4117775 | MS.gene048972:intron | 30.0% | |
| CTCAATCAATGAAATGAGAT+TGG | + | chr4.1:4115551-4115570 | None:intergenic | 30.0% | |
| CTCATATGAAACTTGCAATA+GGG | - | chr4.1:4118555-4118574 | MS.gene048972:CDS | 30.0% | |
| GAAAGGTAAAACAATGAACA+TGG | + | chr4.1:4116616-4116635 | None:intergenic | 30.0% | |
| GATATGATCACAGTAAAACA+AGG | + | chr4.1:4116274-4116293 | None:intergenic | 30.0% | |
| GATCAAAGAATTTAATGAGC+AGG | + | chr4.1:4117250-4117269 | None:intergenic | 30.0% | |
| GATTTCGTGAAGTATATTAC+TGG | - | chr4.1:4115265-4115284 | MS.gene048972:intron | 30.0% | |
| GTGGTAAGTAATAAGCAATT+TGG | - | chr4.1:4118434-4118453 | MS.gene048972:intron | 30.0% | |
| TAAATCATAGCGCTTAAAAG+GGG | + | chr4.1:4116419-4116438 | None:intergenic | 30.0% | |
| TATCAGTTAAATTGAGTGCA+TGG | - | chr4.1:4117652-4117671 | MS.gene048972:intron | 30.0% | |
| TCATGAATACCTGAGTAAAA+TGG | + | chr4.1:4117609-4117628 | None:intergenic | 30.0% | |
| TGATTTATGAGATATACGCT+AGG | - | chr4.1:4116432-4116451 | MS.gene048972:CDS | 30.0% | |
| TTTCTGTTAAATGCACATGA+AGG | - | chr4.1:4118109-4118128 | MS.gene048972:intron | 30.0% | |
| ! | AATAAGCAATTTGGAATTGG+TGG | - | chr4.1:4118443-4118462 | MS.gene048972:intron | 30.0% |
| ! | ATTTGTTAACACAGAGAATC+TGG | + | chr4.1:4115805-4115824 | None:intergenic | 30.0% |
| ! | CAATCTCATTTCATTGATTG+AGG | - | chr4.1:4115549-4115568 | MS.gene048972:intron | 30.0% |
| ! | CATTCTATTTTACGATCTTC+GGG | + | chr4.1:4119065-4119084 | None:intergenic | 30.0% |
| ! | GCATTCTATTTTACGATCTT+CGG | + | chr4.1:4119066-4119085 | None:intergenic | 30.0% |
| ! | GTGAGTTTATTATCTAAGGT+TGG | - | chr4.1:4116557-4116576 | MS.gene048972:intron | 30.0% |
| ! | TATGCATGTTTTCTAGATGT+TGG | - | chr4.1:4117983-4118002 | MS.gene048972:intron | 30.0% |
| ! | TTATTGATTGTGATCGTCTT+CGG | - | chr4.1:4117824-4117843 | MS.gene048972:intron | 30.0% |
| ! | TTTCATTGATTGAGGAATAC+GGG | - | chr4.1:4115557-4115576 | MS.gene048972:intron | 30.0% |
| ! | TTTGAGTACCTTTTATAGCT+AGG | - | chr4.1:4116106-4116125 | MS.gene048972:intron | 30.0% |
| !! | GGTTGCAGAATACTTATTTT+AGG | + | chr4.1:4117229-4117248 | None:intergenic | 30.0% |
| !! | TTGATCATCATTGATTCAGA+TGG | - | chr4.1:4117264-4117283 | MS.gene048972:intron | 30.0% |
| !!! | TTTTATCTTTGGTTTTCAGG+GGG | - | chr4.1:4115482-4115501 | MS.gene048972:intron | 30.0% |
| AAATCGCTATTATGCAAGGT+GGG | - | chr4.1:4116697-4116716 | MS.gene048972:intron | 35.0% | |
| AACAAACCTAATTACCCAGT+AGG | + | chr4.1:4115295-4115314 | None:intergenic | 35.0% | |
| AATGCATGAAAAGTTTGACG+TGG | - | chr4.1:4118723-4118742 | MS.gene048972:CDS | 35.0% | |
| AATTGCCTCCTTTCTAACAT+CGG | + | chr4.1:4117359-4117378 | None:intergenic | 35.0% | |
| AATTTCCGATGTTAGAAAGG+AGG | - | chr4.1:4117351-4117370 | MS.gene048972:CDS | 35.0% | |
| ACAATGTTGTGAAGTTAGGA+GGG | + | chr4.1:4117129-4117148 | None:intergenic | 35.0% | |
| ACACCAATCCTAGCTATAAA+AGG | + | chr4.1:4116117-4116136 | None:intergenic | 35.0% | |
| ACTTGAAAATACCTCATGTG+TGG | + | chr4.1:4117440-4117459 | None:intergenic | 35.0% | |
| ATACACAAAAGTCACATCCT+AGG | + | chr4.1:4118860-4118879 | None:intergenic | 35.0% | |
| ATAGTCACAATGTCATACCT+GGG | + | chr4.1:4118788-4118807 | None:intergenic | 35.0% | |
| ATATTACTGGGATTCCTACT+GGG | - | chr4.1:4115278-4115297 | MS.gene048972:intron | 35.0% | |
| ATTGGTTGTGATCCATCTTA+TGG | + | chr4.1:4118677-4118696 | None:intergenic | 35.0% | |
| CAAGTGCCAAAATTAATCAC+AGG | + | chr4.1:4115369-4115388 | None:intergenic | 35.0% | |
| CATCCACAAAGGAACAAAAT+TGG | + | chr4.1:4117583-4117602 | None:intergenic | 35.0% | |
| CCTTAAATCGCTATTATGCA+AGG | - | chr4.1:4116693-4116712 | MS.gene048972:CDS | 35.0% | |
| CCTTGCATAATAGCGATTTA+AGG | + | chr4.1:4116696-4116715 | None:intergenic | 35.0% | |
| CGATTAAGGTTCATTCTCTT+TGG | - | chr4.1:4115145-4115164 | MS.gene048972:CDS | 35.0% | |
| CTGAAGAAATTGCCATAAGA+TGG | - | chr4.1:4118662-4118681 | MS.gene048972:CDS | 35.0% | |
| CTTCAACACATGTTAGTTGA+AGG | - | chr4.1:4118601-4118620 | MS.gene048972:CDS | 35.0% | |
| CTTGAATATACACACCTCTT+AGG | - | chr4.1:4116586-4116605 | MS.gene048972:intron | 35.0% | |
| GCAAATTTCCGATGTTAGAA+AGG | - | chr4.1:4117348-4117367 | MS.gene048972:CDS | 35.0% | |
| GTAGACAATGTTGTGAAGTT+AGG | + | chr4.1:4117133-4117152 | None:intergenic | 35.0% | |
| TAAAATGGCTTCATCCACAA+AGG | + | chr4.1:4117594-4117613 | None:intergenic | 35.0% | |
| TAAATCGCTATTATGCAAGG+TGG | - | chr4.1:4116696-4116715 | MS.gene048972:intron | 35.0% | |
| TACAATCAGTCAGATTCATG+TGG | + | chr4.1:4118974-4118993 | None:intergenic | 35.0% | |
| TAGAAAGGAGGCAATTAACT+CGG | - | chr4.1:4117363-4117382 | MS.gene048972:CDS | 35.0% | |
| TAGATATGCATGCACATTCA+AGG | + | chr4.1:4117739-4117758 | None:intergenic | 35.0% | |
| TATATTACTGGGATTCCTAC+TGG | - | chr4.1:4115277-4115296 | MS.gene048972:intron | 35.0% | |
| TCAACTAACATGTGTTGAAG+TGG | + | chr4.1:4118601-4118620 | None:intergenic | 35.0% | |
| TCCAGTAACATTTGCAAAGA+AGG | + | chr4.1:4117302-4117321 | None:intergenic | 35.0% | |
| TGAAAAAGACAGTTAGCAGA+AGG | + | chr4.1:4117502-4117521 | None:intergenic | 35.0% | |
| TGAATGTGCATGCATATCTA+TGG | - | chr4.1:4117739-4117758 | MS.gene048972:intron | 35.0% | |
| TTCTAACATCGGAAATTTGC+AGG | + | chr4.1:4117348-4117367 | None:intergenic | 35.0% | |
| TTGAGAGTTATTCACGGATT+TGG | + | chr4.1:4115982-4116001 | None:intergenic | 35.0% | |
| ! | AGTGATATAGGCACACATTT+TGG | + | chr4.1:4116536-4116555 | None:intergenic | 35.0% |
| ! | CAGTTAGACTAGTCATTTGA+TGG | + | chr4.1:4116029-4116048 | None:intergenic | 35.0% |
| ! | CTCTTTGGAAAAACTTGAGT+AGG | - | chr4.1:4115160-4115179 | MS.gene048972:CDS | 35.0% |
| ! | CTTCCAATTTTGTTCCTTTG+TGG | - | chr4.1:4117577-4117596 | MS.gene048972:intron | 35.0% |
| ! | GTACCTTTTATAGCTAGGAT+TGG | - | chr4.1:4116111-4116130 | MS.gene048972:intron | 35.0% |
| ! | TCCATGCCTGTGATTAATTT+TGG | - | chr4.1:4115360-4115379 | MS.gene048972:intron | 35.0% |
| ! | TGACTTTTGTGTATGATGAC+TGG | - | chr4.1:4118866-4118885 | MS.gene048972:CDS | 35.0% |
| ! | TTAGGTCATCTTTTACTCCA+TGG | + | chr4.1:4117211-4117230 | None:intergenic | 35.0% |
| ! | TTGAAGGCCTTGTAAAATCA+GGG | - | chr4.1:4118617-4118636 | MS.gene048972:CDS | 35.0% |
| !! | GTCTTTTTCATACTTCCAGA+AGG | - | chr4.1:4117512-4117531 | MS.gene048972:intron | 35.0% |
| !!! | ACCTCAGGGTTTTTTACTTT+AGG | + | chr4.1:4115114-4115133 | None:intergenic | 35.0% |
| !!! | ATACATTTTGATTCTGGTGC+AGG | + | chr4.1:4117554-4117573 | None:intergenic | 35.0% |
| !!! | ATCATTGTGATTTTTGGTCC+AGG | - | chr4.1:4118819-4118838 | MS.gene048972:CDS | 35.0% |
| !!! | GAAACTTATTTTGATGGTGC+AGG | - | chr4.1:4115030-4115049 | MS.gene048972:intron | 35.0% |
| !!! | TACATTTTGATTCTGGTGCA+GGG | + | chr4.1:4117553-4117572 | None:intergenic | 35.0% |
| !!! | TCATTGTGATTTTTGGTCCA+GGG | - | chr4.1:4118820-4118839 | MS.gene048972:CDS | 35.0% |
| AATCTTCCTAAATCCTCGAC+TGG | - | chr4.1:4114973-4114992 | MS.gene048972:intron | 40.0% | |
| AATGTGGAATCAATGTGCTG+TGG | - | chr4.1:4115765-4115784 | MS.gene048972:intron | 40.0% | |
| ACATATGTAGGGAGCAGAAA+AGG | - | chr4.1:4118490-4118509 | MS.gene048972:intron | 40.0% | |
| ACCAATCAACAGCGTAATCT+AGG | + | chr4.1:4117964-4117983 | None:intergenic | 40.0% | |
| ACTTTAGGCAAAAAACCCTC+AGG | + | chr4.1:4115099-4115118 | None:intergenic | 40.0% | |
| AGGTTTCTCATATGTTTCCC+TGG | + | chr4.1:4118840-4118859 | None:intergenic | 40.0% | |
| ATAACAACAGAACCAGGAAC+AGG | + | chr4.1:4115234-4115253 | None:intergenic | 40.0% | |
| ATCAACAGCGTAATCTAGGA+CGG | + | chr4.1:4117960-4117979 | None:intergenic | 40.0% | |
| ATCAGTCAGATTCATGTGGA+AGG | + | chr4.1:4118970-4118989 | None:intergenic | 40.0% | |
| ATGTGCTGTGGTGTGAAATA+CGG | - | chr4.1:4115777-4115796 | MS.gene048972:intron | 40.0% | |
| ATTGCCGAATGTGTTGAATG+CGG | + | chr4.1:4114878-4114897 | None:intergenic | 40.0% | |
| ATTTCAGCACAAGATGGATG+AGG | - | chr4.1:4116915-4116934 | MS.gene048972:CDS | 40.0% | |
| ATTTCGAGAAAGGATACGAG+TGG | + | chr4.1:4114844-4114863 | None:intergenic | 40.0% | |
| CAGGTATGACATTGTGACTA+TGG | - | chr4.1:4118787-4118806 | MS.gene048972:CDS | 40.0% | |
| CATAGTCACAATGTCATACC+TGG | + | chr4.1:4118789-4118808 | None:intergenic | 40.0% | |
| CTAGAGCATACTACACTAAC+AGG | - | chr4.1:4115596-4115615 | MS.gene048972:intron | 40.0% | |
| GAAGCAGAGTATGGTAGTTA+GGG | + | chr4.1:4115212-4115231 | None:intergenic | 40.0% | |
| GAATACGGGTTTGTGCTTAA+TGG | - | chr4.1:4115571-4115590 | MS.gene048972:intron | 40.0% | |
| GACAATGTTGTGAAGTTAGG+AGG | + | chr4.1:4117130-4117149 | None:intergenic | 40.0% | |
| GATTCCACGCATTAAATGCA+TGG | + | chr4.1:4115960-4115979 | None:intergenic | 40.0% | |
| GATTGTATTGCAATGCAGAC+TGG | - | chr4.1:4118987-4119006 | MS.gene048972:CDS | 40.0% | |
| GCAACTTCTTTGAGTGATTC+AGG | - | chr4.1:4118405-4118424 | MS.gene048972:intron | 40.0% | |
| GCCAAAATTAATCACAGGCA+TGG | + | chr4.1:4115364-4115383 | None:intergenic | 40.0% | |
| GCCTAAAGTAAAAAACCCTG+AGG | - | chr4.1:4115110-4115129 | MS.gene048972:CDS | 40.0% | |
| GCCTTCTTTGCAAATGTTAC+TGG | - | chr4.1:4117298-4117317 | MS.gene048972:intron | 40.0% | |
| GGAATGCAAACATGAACCAA+TGG | - | chr4.1:4117392-4117411 | MS.gene048972:CDS | 40.0% | |
| GGGAAACATATGAGAAACCT+AGG | - | chr4.1:4118840-4118859 | MS.gene048972:CDS | 40.0% | |
| GTCGCCCAAGTTTCTAATAT+TGG | - | chr4.1:4115438-4115457 | MS.gene048972:CDS | 40.0% | |
| GTGTGGTATGTTAATAACCG+AGG | - | chr4.1:4116753-4116772 | MS.gene048972:intron | 40.0% | |
| GTGTTGGAGAATTTCGAGAA+AGG | + | chr4.1:4114854-4114873 | None:intergenic | 40.0% | |
| TAATTCCATGCCATAGGACA+AGG | - | chr4.1:4116811-4116830 | MS.gene048972:intron | 40.0% | |
| TACAGTGACAGCATCAACTA+TGG | - | chr4.1:4114795-4114814 | MS.gene048972:CDS | 40.0% | |
| TAGTCACAATGTCATACCTG+GGG | + | chr4.1:4118787-4118806 | None:intergenic | 40.0% | |
| TATCCCAAACTTGAACCTTC+TGG | + | chr4.1:4117530-4117549 | None:intergenic | 40.0% | |
| TATGAGATATACGCTAGGAC+TGG | - | chr4.1:4116437-4116456 | MS.gene048972:CDS | 40.0% | |
| TCCTAGATTACGCTGTTGAT+TGG | - | chr4.1:4117960-4117979 | MS.gene048972:intron | 40.0% | |
| TCGAGGATTTAGGAAGATTC+TGG | + | chr4.1:4114972-4114991 | None:intergenic | 40.0% | |
| TTTGAGAGGTAAATCGACGT+AGG | + | chr4.1:4114920-4114939 | None:intergenic | 40.0% | |
| TTTGGGTAATTCCATGCCAT+AGG | - | chr4.1:4116805-4116824 | MS.gene048972:intron | 40.0% | |
| ! | ACTTCCAGAAGGTTCAAGTT+TGG | - | chr4.1:4117523-4117542 | MS.gene048972:intron | 40.0% |
| ! | AGGCAATTAACTCGGTTTTC+TGG | - | chr4.1:4117371-4117390 | MS.gene048972:CDS | 40.0% |
| ! | AGTTGATGCTGTCACTGTAA+CGG | + | chr4.1:4114794-4114813 | None:intergenic | 40.0% |
| ! | CGATATATGTTTGTGGACTG+CGG | + | chr4.1:4118204-4118223 | None:intergenic | 40.0% |
| ! | CTTCCAACCCTGATTTTACA+AGG | + | chr4.1:4118627-4118646 | None:intergenic | 40.0% |
| ! | CTTCCAGAAGGTTCAAGTTT+GGG | - | chr4.1:4117524-4117543 | MS.gene048972:intron | 40.0% |
| ! | CTTTTGTGTATGATGACTGG+AGG | - | chr4.1:4118869-4118888 | MS.gene048972:CDS | 40.0% |
| ! | GGTAAATCGACGTAGGTTTT+AGG | + | chr4.1:4114913-4114932 | None:intergenic | 40.0% |
| ! | GTGAACATTTTGGATGCTCA+AGG | - | chr4.1:4116659-4116678 | MS.gene048972:CDS | 40.0% |
| ! | GTTGAAGGCCTTGTAAAATC+AGG | - | chr4.1:4118616-4118635 | MS.gene048972:CDS | 40.0% |
| !! | TACTGAAAGAGCACGAGTTT+TGG | - | chr4.1:4116495-4116514 | MS.gene048972:CDS | 40.0% |
| !! | TGGATGAAGCCATTTTACTC+AGG | - | chr4.1:4117597-4117616 | MS.gene048972:intron | 40.0% |
| !! | TTCTGAAACAGTCCTGAACT+TGG | + | chr4.1:4116846-4116865 | None:intergenic | 40.0% |
| !!! | ATTGCAATGCAGACTGGTTT+TGG | - | chr4.1:4118993-4119012 | MS.gene048972:CDS | 40.0% |
| AAGGATACGAGTGGAGTTGA+AGG | + | chr4.1:4114835-4114854 | None:intergenic | 45.0% | |
| AATCAGGGTTGGAAGAAGCA+AGG | - | chr4.1:4118632-4118651 | MS.gene048972:CDS | 45.0% | |
| ACATACCACACACACCATTG+TGG | + | chr4.1:4116744-4116763 | None:intergenic | 45.0% | |
| ACTGAACCAGTCGAGGATTT+AGG | + | chr4.1:4114982-4115001 | None:intergenic | 45.0% | |
| AGGTACTCAAATAAGTCGCG+TGG | + | chr4.1:4116097-4116116 | None:intergenic | 45.0% | |
| ATCAGCTGCTGAATCAGGAT+GGG | - | chr4.1:4116892-4116911 | MS.gene048972:intron | 45.0% | |
| ATCATAGCGCTTAAAAGGGG+AGG | + | chr4.1:4116416-4116435 | None:intergenic | 45.0% | |
| ATGAACATGGGCAACCTAAG+AGG | + | chr4.1:4116603-4116622 | None:intergenic | 45.0% | |
| ATGTGTTGAATGCGGTGTGT+TGG | + | chr4.1:4114870-4114889 | None:intergenic | 45.0% | |
| ATTGCGGAGAATTTGGAGGT+GGG | - | chr4.1:4118749-4118768 | MS.gene048972:CDS | 45.0% | |
| CAAATTCCCCCTTTCCGATA+CGG | - | chr4.1:4114936-4114955 | MS.gene048972:intron | 45.0% | |
| CACACCGCATTCAACACATT+CGG | - | chr4.1:4114871-4114890 | MS.gene048972:intron | 45.0% | |
| CATGGCGTAGCAATTCATCT+TGG | + | chr4.1:4115942-4115961 | None:intergenic | 45.0% | |
| CTCGAAAGTCTCAAAACCTC+TGG | - | chr4.1:4118360-4118379 | MS.gene048972:intron | 45.0% | |
| GAGCATACTACACTAACAGG+AGG | - | chr4.1:4115599-4115618 | MS.gene048972:intron | 45.0% | |
| GATGGGATTTCAGCACAAGA+TGG | - | chr4.1:4116909-4116928 | MS.gene048972:CDS | 45.0% | |
| GGAAGCAGAGTATGGTAGTT+AGG | + | chr4.1:4115213-4115232 | None:intergenic | 45.0% | |
| GGGATTCCTACTGGGTAATT+AGG | - | chr4.1:4115286-4115305 | MS.gene048972:intron | 45.0% | |
| GTGCATTGCTTACACACACT+AGG | + | chr4.1:4116986-4117005 | None:intergenic | 45.0% | |
| TACGCCATGCATTTAATGCG+TGG | - | chr4.1:4115953-4115972 | MS.gene048972:intron | 45.0% | |
| TGAACCAATGGCTTGATTCC+TGG | - | chr4.1:4117404-4117423 | MS.gene048972:CDS | 45.0% | |
| TGGCATTCTTGGAGGAGTTT+GGG | - | chr4.1:4119036-4119055 | MS.gene048972:CDS | 45.0% | |
| ! | AGGCCTTGTAAAATCAGGGT+TGG | - | chr4.1:4118621-4118640 | MS.gene048972:CDS | 45.0% |
| !! | GAGTAGGAAAGTATCCACTG+AGG | - | chr4.1:4115176-4115195 | MS.gene048972:CDS | 45.0% |
| !!! | ACTGGTTTTGGCTGGTCAAA+TGG | - | chr4.1:4119005-4119024 | MS.gene048972:CDS | 45.0% |
| !!! | GAGCACGAGTTTTGGAATTC+AGG | - | chr4.1:4116503-4116522 | MS.gene048972:CDS | 45.0% |
| !!! | TTTGGTTTTCAGGGGGTTGT+TGG | - | chr4.1:4115489-4115508 | MS.gene048972:intron | 45.0% |
| AAAACCCTGAGGTCAGAGCA+TGG | - | chr4.1:4115121-4115140 | MS.gene048972:CDS | 50.0% | |
| AAACCCTGAGGTCAGAGCAT+GGG | - | chr4.1:4115122-4115141 | MS.gene048972:CDS | 50.0% | |
| AAGCGTGATCCGTATCGGAA+AGG | + | chr4.1:4114948-4114967 | None:intergenic | 50.0% | |
| AAGGCCAGAATCGTCCACAA+TGG | - | chr4.1:4116727-4116746 | MS.gene048972:intron | 50.0% | |
| ACTTCACGAAATCGCGAACC+AGG | + | chr4.1:4115258-4115277 | None:intergenic | 50.0% | |
| AGATGCCTTGTCCTATGGCA+TGG | + | chr4.1:4116819-4116838 | None:intergenic | 50.0% | |
| AGCGTGATCCGTATCGGAAA+GGG | + | chr4.1:4114947-4114966 | None:intergenic | 50.0% | |
| AGGCATCTGCTTCCAAGTTC+AGG | - | chr4.1:4116831-4116850 | MS.gene048972:intron | 50.0% | |
| ATAGGGACTTCCCGAATGGT+TGG | - | chr4.1:4118572-4118591 | MS.gene048972:CDS | 50.0% | |
| ATCGTCCACAATGGTGTGTG+TGG | - | chr4.1:4116736-4116755 | MS.gene048972:intron | 50.0% | |
| ATGCAAGGTGGGACAAACCA+AGG | - | chr4.1:4116708-4116727 | MS.gene048972:intron | 50.0% | |
| ATGTGTGGTATTGCTGAGCC+AGG | + | chr4.1:4117425-4117444 | None:intergenic | 50.0% | |
| ATTGTGGACGATTCTGGCCT+TGG | + | chr4.1:4116728-4116747 | None:intergenic | 50.0% | |
| CACACCATTGTGGACGATTC+TGG | + | chr4.1:4116734-4116753 | None:intergenic | 50.0% | |
| CAGCAGCTGATGCTAGTTCA+CGG | + | chr4.1:4116883-4116902 | None:intergenic | 50.0% | |
| CAGGAACAGGAAGCAGAGTA+TGG | + | chr4.1:4115221-4115240 | None:intergenic | 50.0% | |
| CATACTCTGCTTCCTGTTCC+TGG | - | chr4.1:4115219-4115238 | MS.gene048972:CDS | 50.0% | |
| CATCAGCTGCTGAATCAGGA+TGG | - | chr4.1:4116891-4116910 | MS.gene048972:intron | 50.0% | |
| CATTCTTGGAGGAGTTTGGG+TGG | - | chr4.1:4119039-4119058 | MS.gene048972:CDS | 50.0% | |
| CATTGCGGAGAATTTGGAGG+TGG | - | chr4.1:4118748-4118767 | MS.gene048972:CDS | 50.0% | |
| CCAGGGATAACAACAGAACC+AGG | + | chr4.1:4115240-4115259 | None:intergenic | 50.0% | |
| CTAGCATCAGCTGCTGAATC+AGG | - | chr4.1:4116887-4116906 | MS.gene048972:intron | 50.0% | |
| CTGGCATTCTTGGAGGAGTT+TGG | - | chr4.1:4119035-4119054 | MS.gene048972:CDS | 50.0% | |
| CTGGTCAAATGGAGTTGTGC+TGG | - | chr4.1:4119016-4119035 | MS.gene048972:CDS | 50.0% | |
| CTTCACGAAATCGCGAACCA+GGG | + | chr4.1:4115257-4115276 | None:intergenic | 50.0% | |
| GAAGCAGATGCCTTGTCCTA+TGG | + | chr4.1:4116824-4116843 | None:intergenic | 50.0% | |
| GCAAAAAACCCTCAGGCTCA+GGG | + | chr4.1:4115092-4115111 | None:intergenic | 50.0% | |
| GCTCAGCAATACCACACATG+AGG | - | chr4.1:4117426-4117445 | MS.gene048972:intron | 50.0% | |
| GTTGGAAGAAGCAAGGTCGT+TGG | - | chr4.1:4118639-4118658 | MS.gene048972:CDS | 50.0% | |
| TAGGGACTTCCCGAATGGTT+GGG | - | chr4.1:4118573-4118592 | MS.gene048972:CDS | 50.0% | |
| TCGGAAAGGGGGAATTTGAG+AGG | + | chr4.1:4114934-4114953 | None:intergenic | 50.0% | |
| TCGTGCTCTTTCAGTAGTGC+AGG | + | chr4.1:4116491-4116510 | None:intergenic | 50.0% | |
| TCTCGTGTACTCTGATCCAG+AGG | - | chr4.1:4115059-4115078 | MS.gene048972:CDS | 50.0% | |
| TGAAGTGGAGCCCAACCATT+CGG | + | chr4.1:4118586-4118605 | None:intergenic | 50.0% | |
| TGAGCCAGGAATCAAGCCAT+TGG | + | chr4.1:4117411-4117430 | None:intergenic | 50.0% | |
| TGAGTGATTCAGGACAGCAG+TGG | - | chr4.1:4118415-4118434 | MS.gene048972:intron | 50.0% | |
| TGCAATAGGGACTTCCCGAA+TGG | - | chr4.1:4118568-4118587 | MS.gene048972:CDS | 50.0% | |
| TTGCGGAGAATTTGGAGGTG+GGG | - | chr4.1:4118750-4118769 | MS.gene048972:CDS | 50.0% | |
| TTGGGGTAAGTTGCAGACCA+TGG | - | chr4.1:4117191-4117210 | MS.gene048972:intron | 50.0% | |
| ! | AGTTGTGCTGGCATTCTTGG+AGG | - | chr4.1:4119028-4119047 | MS.gene048972:CDS | 50.0% |
| ! | CTGGAAAGCGTGATCCGTAT+CGG | + | chr4.1:4114953-4114972 | None:intergenic | 50.0% |
| ! | GATTTTGTCCCTGAGCCTGA+GGG | - | chr4.1:4115081-4115100 | MS.gene048972:CDS | 50.0% |
| ! | TGGAGTTGTGCTGGCATTCT+TGG | - | chr4.1:4119025-4119044 | MS.gene048972:CDS | 50.0% |
| !! | CCTGGTTCTGTTGTTATCCC+TGG | - | chr4.1:4115237-4115256 | MS.gene048972:CDS | 50.0% |
| !!! | CAATGCAGACTGGTTTTGGC+TGG | - | chr4.1:4118997-4119016 | MS.gene048972:CDS | 50.0% |
| AACGGACACTGAACCAGTCG+AGG | + | chr4.1:4114989-4115008 | None:intergenic | 55.0% | |
| AGGGTGAGTCTTGACCTCAG+TGG | + | chr4.1:4115193-4115212 | None:intergenic | 55.0% | |
| CGTGATCCGTATCGGAAAGG+GGG | + | chr4.1:4114945-4114964 | None:intergenic | 55.0% | |
| GAAGTGGAGCCCAACCATTC+GGG | + | chr4.1:4118585-4118604 | None:intergenic | 55.0% | |
| GCGTGATCCGTATCGGAAAG+GGG | + | chr4.1:4114946-4114965 | None:intergenic | 55.0% | |
| GGCAAAAAACCCTCAGGCTC+AGG | + | chr4.1:4115093-4115112 | None:intergenic | 55.0% | |
| GGCTAAGACAGCTCCCCATA+TGG | + | chr4.1:4117481-4117500 | None:intergenic | 55.0% | |
| GGCTCAGGGACAAAATCCTC+TGG | + | chr4.1:4115078-4115097 | None:intergenic | 55.0% | |
| GGTCAGAGCATGGGCGATTA+AGG | - | chr4.1:4115131-4115150 | MS.gene048972:CDS | 55.0% | |
| TAGCGCTTAAAAGGGGAGGC+TGG | + | chr4.1:4116412-4116431 | None:intergenic | 55.0% | |
| TGCGGAGAATTTGGAGGTGG+GGG | - | chr4.1:4118751-4118770 | MS.gene048972:CDS | 55.0% | |
| TGGGGGTGAATATGTACCCC+AGG | - | chr4.1:4118768-4118787 | MS.gene048972:CDS | 55.0% | |
| ! | GGATTTTGTCCCTGAGCCTG+AGG | - | chr4.1:4115080-4115099 | MS.gene048972:CDS | 55.0% |
| ! | TGGGGGTGCACCAATGACAA+TGG | + | chr4.1:4115654-4115673 | None:intergenic | 55.0% |
| ! | TGTGGACTGCGGTGCATGTT+TGG | + | chr4.1:4118193-4118212 | None:intergenic | 55.0% |
| ATCGCCCATGCTCTGACCTC+AGG | + | chr4.1:4115129-4115148 | None:intergenic | 60.0% | |
| CAACTCCAGCAGCACGAAGC+AGG | + | chr4.1:4118386-4118405 | None:intergenic | 60.0% | |
| TCGCCCATGCTCTGACCTCA+GGG | + | chr4.1:4115128-4115147 | None:intergenic | 60.0% | |
| AGCAGCACGAAGCAGGCCAG+AGG | + | chr4.1:4118379-4118398 | None:intergenic | 65.0% | |
| TCTGGCCTGCTTCGTGCTGC+TGG | - | chr4.1:4118378-4118397 | MS.gene048972:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 4114748 | 4119088 | 4114748 | ID=MS.gene048972 |
| chr4.1 | mRNA | 4114748 | 4119088 | 4114748 | ID=MS.gene048972.t1;Parent=MS.gene048972 |
| chr4.1 | exon | 4118529 | 4119088 | 4118529 | ID=MS.gene048972.t1.exon1;Parent=MS.gene048972.t1 |
| chr4.1 | CDS | 4118529 | 4119088 | 4118529 | ID=cds.MS.gene048972.t1;Parent=MS.gene048972.t1 |
| chr4.1 | exon | 4118216 | 4118335 | 4118216 | ID=MS.gene048972.t1.exon2;Parent=MS.gene048972.t1 |
| chr4.1 | CDS | 4118216 | 4118335 | 4118216 | ID=cds.MS.gene048972.t1;Parent=MS.gene048972.t1 |
| chr4.1 | exon | 4117312 | 4117427 | 4117312 | ID=MS.gene048972.t1.exon3;Parent=MS.gene048972.t1 |
| chr4.1 | CDS | 4117312 | 4117427 | 4117312 | ID=cds.MS.gene048972.t1;Parent=MS.gene048972.t1 |
| chr4.1 | exon | 4117088 | 4117188 | 4117088 | ID=MS.gene048972.t1.exon4;Parent=MS.gene048972.t1 |
| chr4.1 | CDS | 4117088 | 4117188 | 4117088 | ID=cds.MS.gene048972.t1;Parent=MS.gene048972.t1 |
| chr4.1 | exon | 4116900 | 4117009 | 4116900 | ID=MS.gene048972.t1.exon5;Parent=MS.gene048972.t1 |
| chr4.1 | CDS | 4116900 | 4117009 | 4116900 | ID=cds.MS.gene048972.t1;Parent=MS.gene048972.t1 |
| chr4.1 | exon | 4116641 | 4116713 | 4116641 | ID=MS.gene048972.t1.exon6;Parent=MS.gene048972.t1 |
| chr4.1 | CDS | 4116641 | 4116713 | 4116641 | ID=cds.MS.gene048972.t1;Parent=MS.gene048972.t1 |
| chr4.1 | exon | 4116389 | 4116553 | 4116389 | ID=MS.gene048972.t1.exon7;Parent=MS.gene048972.t1 |
| chr4.1 | CDS | 4116389 | 4116553 | 4116389 | ID=cds.MS.gene048972.t1;Parent=MS.gene048972.t1 |
| chr4.1 | exon | 4116218 | 4116305 | 4116218 | ID=MS.gene048972.t1.exon8;Parent=MS.gene048972.t1 |
| chr4.1 | CDS | 4116218 | 4116305 | 4116218 | ID=cds.MS.gene048972.t1;Parent=MS.gene048972.t1 |
| chr4.1 | exon | 4115400 | 4115499 | 4115400 | ID=MS.gene048972.t1.exon9;Parent=MS.gene048972.t1 |
| chr4.1 | CDS | 4115400 | 4115499 | 4115400 | ID=cds.MS.gene048972.t1;Parent=MS.gene048972.t1 |
| chr4.1 | exon | 4115047 | 4115260 | 4115047 | ID=MS.gene048972.t1.exon10;Parent=MS.gene048972.t1 |
| chr4.1 | CDS | 4115047 | 4115260 | 4115047 | ID=cds.MS.gene048972.t1;Parent=MS.gene048972.t1 |
| chr4.1 | exon | 4114748 | 4114831 | 4114748 | ID=MS.gene048972.t1.exon11;Parent=MS.gene048972.t1 |
| chr4.1 | CDS | 4114748 | 4114831 | 4114748 | ID=cds.MS.gene048972.t1;Parent=MS.gene048972.t1 |
| Gene Sequence |
| Protein sequence |
