Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06119.t1 | KEH21288.1 | 95.2 | 580 | 24 | 2 | 1 | 576 | 1 | 580 | 0.00E+00 | 1132.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06119.t1 | Q9SU50 | 58.6 | 553 | 224 | 4 | 27 | 575 | 74 | 625 | 3.7e-193 | 676.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06119.t1 | A0A072TWM8 | 95.2 | 580 | 24 | 2 | 1 | 576 | 1 | 580 | 0.0e+00 | 1132.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene06119 | MS.gene20200 | 0.974147 | 1.20E-137 | -1.69E-46 |
| MS.gene06119 | MS.gene55838 | 0.886353 | 3.68E-72 | -1.69E-46 |
| MS.gene06119 | MS.gene61520 | 0.802061 | 6.71E-49 | -1.69E-46 |
| MS.gene06119 | MS.gene61521 | 0.806069 | 9.84E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene66304 | MS.gene06119 | PPI |
| MS.gene06119 | MS.gene55873 | PPI |
| MS.gene20170 | MS.gene06119 | PPI |
| MS.gene06119 | MS.gene030278 | PPI |
| MS.gene049012 | MS.gene06119 | PPI |
| MS.gene06185 | MS.gene06119 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06119.t1 | MTR_8g099985 | 94.655 | 580 | 27 | 1 | 1 | 576 | 1 | 580 | 0.0 | 1123 |
| MS.gene06119.t1 | MTR_8g099985 | 97.283 | 552 | 15 | 0 | 25 | 576 | 2 | 553 | 0.0 | 1117 |
| MS.gene06119.t1 | MTR_8g099985 | 94.483 | 580 | 27 | 2 | 1 | 576 | 1 | 579 | 0.0 | 1116 |
| MS.gene06119.t1 | MTR_8g099985 | 97.101 | 552 | 15 | 1 | 25 | 576 | 2 | 552 | 0.0 | 1111 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06119.t1 | AT4G24040 | 57.645 | 569 | 233 | 5 | 15 | 576 | 59 | 626 | 0.0 | 655 |
Find 142 sgRNAs with CRISPR-Local
Find 298 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATAAATCATAGCGCTTAAA+AGG | 0.150099 | 4.2:+3909163 | None:intergenic |
| GGGATTCCTACTGGGTAATT+AGG | 0.188185 | 4.2:-3910295 | MS.gene06119:intron |
| GTGGAACATTGCGGAGAATT+TGG | 0.215201 | 4.2:-3906839 | MS.gene06119:CDS |
| CATACTCTGCTTCCTGTTCC+TGG | 0.232512 | 4.2:-3910362 | MS.gene06119:CDS |
| CCTTGCATAATAGCGATTTA+AGG | 0.232755 | 4.2:+3908888 | None:intergenic |
| GCAACTTCTTTGAGTGATTC+AGG | 0.233453 | 4.2:-3907176 | MS.gene06119:CDS |
| GCCTTCTTTGCAAATGTTAC+TGG | 0.243160 | 4.2:-3908283 | MS.gene06119:CDS |
| CGATTAAGGTTCATTCTCTT+TGG | 0.245075 | 4.2:-3910436 | MS.gene06119:CDS |
| CTGGCATTCTTGGAGGAGTT+TGG | 0.263221 | 4.2:-3906546 | MS.gene06119:CDS |
| GGAAGCAGAGTATGGTAGTT+AGG | 0.277116 | 4.2:+3910371 | None:intergenic |
| TCGAGGATTTAGGAAGATTC+TGG | 0.291598 | 4.2:+3910612 | None:intergenic |
| CACACCATTGTGGACGATTC+TGG | 0.297697 | 4.2:+3908850 | None:intergenic |
| TGGCATTCTTGGAGGAGTTT+GGG | 0.304022 | 4.2:-3906545 | MS.gene06119:CDS |
| ATTGGTTGTGATCCATCTTA+TGG | 0.308508 | 4.2:+3906907 | None:intergenic |
| ACTGAACCAGTCGAGGATTT+AGG | 0.309319 | 4.2:+3910602 | None:intergenic |
| TGGAGTTGTGCTGGCATTCT+TGG | 0.309506 | 4.2:-3906556 | MS.gene06119:CDS |
| TTCTAACATCGGAAATTTGC+AGG | 0.312438 | 4.2:+3908236 | None:intergenic |
| ATTGCAATGCAGACTGGTTT+TGG | 0.312604 | 4.2:-3906588 | MS.gene06119:intron |
| ATTGTGGACGATTCTGGCCT+TGG | 0.323742 | 4.2:+3908856 | None:intergenic |
| CATCCACAAAGGAACAAAAT+TGG | 0.326919 | 4.2:+3908001 | None:intergenic |
| CTTCCAGAAGGTTCAAGTTT+GGG | 0.328084 | 4.2:-3908057 | MS.gene06119:intron |
| TACTGAAAGAGCACGAGTTT+TGG | 0.328407 | 4.2:-3909086 | MS.gene06119:CDS |
| ACTTCCAGAAGGTTCAAGTT+TGG | 0.328806 | 4.2:-3908058 | MS.gene06119:intron |
| TCATGAATACCTGAGTAAAA+TGG | 0.329622 | 4.2:+3907975 | None:intergenic |
| TCTGGCCTGCTTCGTGCTGC+TGG | 0.332816 | 4.2:-3907203 | MS.gene06119:CDS |
| GGTCAGAGCATGGGCGATTA+AGG | 0.337495 | 4.2:-3910450 | MS.gene06119:CDS |
| TGAACCAATGGCTTGATTCC+TGG | 0.337512 | 4.2:-3908177 | MS.gene06119:CDS |
| GAATACGGGTTTGTGCTTAA+TGG | 0.346920 | 4.2:-3910010 | MS.gene06119:CDS |
| GTTGAAGGCCTTGTAAAATC+AGG | 0.348652 | 4.2:-3906965 | MS.gene06119:CDS |
| GTGATATAGAATTAGTTAAA+AGG | 0.354626 | 4.2:-3909122 | MS.gene06119:CDS |
| CAAATGTTACTGGAGATAAT+AGG | 0.358114 | 4.2:-3908273 | MS.gene06119:CDS |
| GATTTAAATGCATTTCTACT+TGG | 0.364005 | 4.2:-3908409 | MS.gene06119:CDS |
| CTAGCATCAGCTGCTGAATC+AGG | 0.368826 | 4.2:-3908694 | MS.gene06119:CDS |
| AGGCATCTGCTTCCAAGTTC+AGG | 0.372013 | 4.2:-3908750 | MS.gene06119:CDS |
| ATCGCCCATGCTCTGACCTC+AGG | 0.375305 | 4.2:+3910455 | None:intergenic |
| CCTGGTTCTGTTGTTATCCC+TGG | 0.380817 | 4.2:-3910344 | MS.gene06119:CDS |
| CAATCTCATTTCATTGATTG+AGG | 0.383699 | 4.2:-3910032 | MS.gene06119:CDS |
| AGAAATGCATTTAAATCAAC+AGG | 0.395594 | 4.2:+3908415 | None:intergenic |
| ATTTCATTGATTGAGGAATA+CGG | 0.395655 | 4.2:-3910025 | MS.gene06119:CDS |
| TCCAGTAACATTTGCAAAGA+AGG | 0.405233 | 4.2:+3908282 | None:intergenic |
| CAGGAACAGGAAGCAGAGTA+TGG | 0.406552 | 4.2:+3910363 | None:intergenic |
| GTAGACAATGTTGTGAAGTT+AGG | 0.407549 | 4.2:+3908451 | None:intergenic |
| TACAGTGACAGCATCAACTA+TGG | 0.410643 | 4.2:-3910786 | MS.gene06119:CDS |
| ATTTAAATGCATTTCTACTT+GGG | 0.415801 | 4.2:-3908408 | MS.gene06119:CDS |
| TATATTACTGGGATTCCTAC+TGG | 0.417297 | 4.2:-3910304 | MS.gene06119:CDS |
| AGCGTGATCCGTATCGGAAA+GGG | 0.420355 | 4.2:+3910637 | None:intergenic |
| GATTTCGTGAAGTATATTAC+TGG | 0.429451 | 4.2:-3910316 | MS.gene06119:CDS |
| GCAAATTTCCGATGTTAGAA+AGG | 0.431097 | 4.2:-3908233 | MS.gene06119:CDS |
| CTAGAGCATACTACACTAAC+AGG | 0.433578 | 4.2:-3909985 | MS.gene06119:CDS |
| CTCAATCAATGAAATGAGAT+TGG | 0.439063 | 4.2:+3910033 | None:intergenic |
| GAAGTGGAGCCCAACCATTC+GGG | 0.440275 | 4.2:+3906999 | None:intergenic |
| CTTCAACACATGTTAGTTGA+AGG | 0.440568 | 4.2:-3906980 | MS.gene06119:CDS |
| TGAAGTGGAGCCCAACCATT+CGG | 0.445190 | 4.2:+3906998 | None:intergenic |
| ATAAATCATAGCGCTTAAAA+GGG | 0.448110 | 4.2:+3909164 | None:intergenic |
| TTCTGAAACAGTCCTGAACT+TGG | 0.449107 | 4.2:+3908738 | None:intergenic |
| GAAGCAGAGTATGGTAGTTA+GGG | 0.453589 | 4.2:+3910372 | None:intergenic |
| TATACATAAAGTGAACATTT+CGG | 0.459139 | 4.2:-3908932 | MS.gene06119:CDS |
| GGCTCAGGGACAAAATCCTC+TGG | 0.464693 | 4.2:+3910506 | None:intergenic |
| ACTTCACGAAATCGCGAACC+AGG | 0.465854 | 4.2:+3910326 | None:intergenic |
| AAGGATACGAGTGGAGTTGA+AGG | 0.466489 | 4.2:+3910749 | None:intergenic |
| CTCGAAAGTCTCAAAACCTC+TGG | 0.471532 | 4.2:-3907221 | MS.gene06119:CDS |
| CTGAAGAAATTGCCATAAGA+TGG | 0.477213 | 4.2:-3906919 | MS.gene06119:CDS |
| TTTCATTGATTGAGGAATAC+GGG | 0.491455 | 4.2:-3910024 | MS.gene06119:CDS |
| TAGGGACTTCCCGAATGGTT+GGG | 0.494523 | 4.2:-3907008 | MS.gene06119:CDS |
| ATAACAACAGAACCAGGAAC+AGG | 0.502133 | 4.2:+3910350 | None:intergenic |
| CTGGAAAGCGTGATCCGTAT+CGG | 0.508838 | 4.2:+3910631 | None:intergenic |
| CTGGTCAAATGGAGTTGTGC+TGG | 0.514815 | 4.2:-3906565 | MS.gene06119:CDS |
| CATTCTTGGAGGAGTTTGGG+TGG | 0.515798 | 4.2:-3906542 | MS.gene06119:CDS |
| TGCGGAGAATTTGGAGGTGG+GGG | 0.515962 | 4.2:-3906830 | MS.gene06119:CDS |
| TTGAAGGCCTTGTAAAATCA+GGG | 0.517177 | 4.2:-3906964 | MS.gene06119:CDS |
| TCGTGCTCTTTCAGTAGTGC+AGG | 0.522605 | 4.2:+3909093 | None:intergenic |
| CAGCAGCTGATGCTAGTTCA+CGG | 0.526218 | 4.2:+3908701 | None:intergenic |
| CAACTCCAGCAGCACGAAGC+AGG | 0.532599 | 4.2:+3907198 | None:intergenic |
| GACAATGTTGTGAAGTTAGG+AGG | 0.536747 | 4.2:+3908454 | None:intergenic |
| CACACCGCATTCAACACATT+CGG | 0.536936 | 4.2:-3910710 | MS.gene06119:CDS |
| ATAGGGACTTCCCGAATGGT+TGG | 0.537673 | 4.2:-3907009 | MS.gene06119:intron |
| AATTGCCTCCTTTCTAACAT+CGG | 0.541772 | 4.2:+3908225 | None:intergenic |
| TTTAAATGCATTTCTACTTG+GGG | 0.544167 | 4.2:-3908407 | MS.gene06119:intron |
| AGCAGCACGAAGCAGGCCAG+AGG | 0.544937 | 4.2:+3907205 | None:intergenic |
| TCAACTAACATGTGTTGAAG+TGG | 0.545752 | 4.2:+3906983 | None:intergenic |
| CATCAGCTGCTGAATCAGGA+TGG | 0.547532 | 4.2:-3908690 | MS.gene06119:CDS |
| ATTTCGTGAAGTATATTACT+GGG | 0.547731 | 4.2:-3910315 | MS.gene06119:CDS |
| CATTGCGGAGAATTTGGAGG+TGG | 0.549996 | 4.2:-3906833 | MS.gene06119:CDS |
| AGGCCTTGTAAAATCAGGGT+TGG | 0.550849 | 4.2:-3906960 | MS.gene06119:CDS |
| TAGCGCTTAAAAGGGGAGGC+TGG | 0.552660 | 4.2:+3909172 | None:intergenic |
| TAGAAAGGAGGCAATTAACT+CGG | 0.554148 | 4.2:-3908218 | MS.gene06119:CDS |
| TCGCCCATGCTCTGACCTCA+GGG | 0.556142 | 4.2:+3910456 | None:intergenic |
| ACAATGTTGTGAAGTTAGGA+GGG | 0.558386 | 4.2:+3908455 | None:intergenic |
| AGTTGTGCTGGCATTCTTGG+AGG | 0.560594 | 4.2:-3906553 | MS.gene06119:CDS |
| GTGTTGGAGAATTTCGAGAA+AGG | 0.563419 | 4.2:+3910730 | None:intergenic |
| CCAGGGATAACAACAGAACC+AGG | 0.567138 | 4.2:+3910344 | None:intergenic |
| GTGAACATTTCGGATGCTCA+AGG | 0.569724 | 4.2:-3908922 | MS.gene06119:CDS |
| GAACATTGCGGAGAATTTGG+AGG | 0.573813 | 4.2:-3906836 | MS.gene06119:CDS |
| GATGGGATTTCAGCACAAGA+TGG | 0.574741 | 4.2:-3908672 | MS.gene06119:CDS |
| TGAGCCAGGAATCAAGCCAT+TGG | 0.576256 | 4.2:+3908173 | None:intergenic |
| ATGTGTGGTATTGCTGAGCC+AGG | 0.578031 | 4.2:+3908159 | None:intergenic |
| ATATTACTGGGATTCCTACT+GGG | 0.578376 | 4.2:-3910303 | MS.gene06119:CDS |
| TGCAATAGGGACTTCCCGAA+TGG | 0.582422 | 4.2:-3907013 | MS.gene06119:intron |
| ACGCTAAGCAGCAATGGCCA+AGG | 0.586201 | 4.2:-3910846 | None:intergenic |
| AAGCGTGATCCGTATCGGAA+AGG | 0.588837 | 4.2:+3910636 | None:intergenic |
| GCGTGATCCGTATCGGAAAG+GGG | 0.591271 | 4.2:+3910638 | None:intergenic |
| ATCAGCTGCTGAATCAGGAT+GGG | 0.594438 | 4.2:-3908689 | MS.gene06119:CDS |
| AAACCCTGAGGTCAGAGCAT+GGG | 0.598300 | 4.2:-3910459 | MS.gene06119:CDS |
| AATCTTCCTAAATCCTCGAC+TGG | 0.599150 | 4.2:-3910608 | MS.gene06119:CDS |
| CCTTAAATCGCTATTATGCA+AGG | 0.603776 | 4.2:-3908888 | MS.gene06119:CDS |
| AAAACCCTGAGGTCAGAGCA+TGG | 0.605362 | 4.2:-3910460 | MS.gene06119:CDS |
| AACGGACACTGAACCAGTCG+AGG | 0.607852 | 4.2:+3910595 | None:intergenic |
| ATTGCGGAGAATTTGGAGGT+GGG | 0.609969 | 4.2:-3906832 | MS.gene06119:CDS |
| TATGAGATATACGCTAGGAC+TGG | 0.610537 | 4.2:-3909144 | MS.gene06119:CDS |
| GGAATGCAAACATGAACCAA+TGG | 0.611077 | 4.2:-3908189 | MS.gene06119:CDS |
| GTTGGAAGAAGCAAGGTCGT+TGG | 0.612218 | 4.2:-3906942 | MS.gene06119:CDS |
| AAAACGATTCAAATCATGAA+CGG | 0.617469 | 4.2:+3910577 | None:intergenic |
| ATCATAGCGCTTAAAAGGGG+AGG | 0.618174 | 4.2:+3909168 | None:intergenic |
| AATTTCCGATGTTAGAAAGG+AGG | 0.620169 | 4.2:-3908230 | MS.gene06119:CDS |
| TTGCGGAGAATTTGGAGGTG+GGG | 0.625168 | 4.2:-3906831 | MS.gene06119:CDS |
| ATGTGTTGAATGCGGTGTGT+TGG | 0.625546 | 4.2:+3910714 | None:intergenic |
| ATTTCAGCACAAGATGGATG+AGG | 0.627854 | 4.2:-3908666 | MS.gene06119:intron |
| TTTGAGAGGTAAATCGACGT+AGG | 0.628012 | 4.2:+3910664 | None:intergenic |
| ATGCAAGGTGGGACAAACCA+AGG | 0.631432 | 4.2:-3908873 | MS.gene06119:CDS |
| TGATTTATGAGATATACGCT+AGG | 0.633128 | 4.2:-3909149 | MS.gene06119:CDS |
| ATTTCGAGAAAGGATACGAG+TGG | 0.636358 | 4.2:+3910740 | None:intergenic |
| ACATACCACACACACCATTG+TGG | 0.636727 | 4.2:+3908840 | None:intergenic |
| AAATCGCTATTATGCAAGGT+GGG | 0.639450 | 4.2:-3908884 | MS.gene06119:CDS |
| CTTCACGAAATCGCGAACCA+GGG | 0.640218 | 4.2:+3910327 | None:intergenic |
| TAAATCGCTATTATGCAAGG+TGG | 0.642260 | 4.2:-3908885 | MS.gene06119:CDS |
| TAAATCATAGCGCTTAAAAG+GGG | 0.643981 | 4.2:+3909165 | None:intergenic |
| AAGTTTGACGTGGAACATTG+CGG | 0.648225 | 4.2:-3906848 | MS.gene06119:CDS |
| TAAAATGGCTTCATCCACAA+AGG | 0.649607 | 4.2:+3907990 | None:intergenic |
| AACAAACCTAATTACCCAGT+AGG | 0.651976 | 4.2:+3910289 | None:intergenic |
| TGAGTGATTCAGGACAGCAG+TGG | 0.659605 | 4.2:-3907166 | MS.gene06119:intron |
| AGTTGATGCTGTCACTGTAA+CGG | 0.661317 | 4.2:+3910790 | None:intergenic |
| AATCAGGGTTGGAAGAAGCA+AGG | 0.661754 | 4.2:-3906949 | MS.gene06119:CDS |
| ACTTGAAAATACCTCATGTG+TGG | 0.670842 | 4.2:+3908144 | None:intergenic |
| CGTGATCCGTATCGGAAAGG+GGG | 0.673238 | 4.2:+3910639 | None:intergenic |
| TCTCGTGTACTCTGATCCAG+AGG | 0.686829 | 4.2:-3910522 | MS.gene06119:CDS |
| AAGGCCAGAATCGTCCACAA+TGG | 0.691379 | 4.2:-3908854 | MS.gene06119:intron |
| GCTCAGCAATACCACACATG+AGG | 0.698303 | 4.2:-3908155 | MS.gene06119:intron |
| GAGCATACTACACTAACAGG+AGG | 0.711397 | 4.2:-3909982 | MS.gene06119:intron |
| AATGCATGAAAAGTTTGACG+TGG | 0.715752 | 4.2:-3906858 | MS.gene06119:CDS |
| AGGGTGAGTCTTGACCTCAG+TGG | 0.753249 | 4.2:+3910391 | None:intergenic |
| ATTGCCGAATGTGTTGAATG+CGG | 0.761724 | 4.2:+3910706 | None:intergenic |
| GAGTAGGAAAGTATCCACTG+AGG | 0.796738 | 4.2:-3910405 | MS.gene06119:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACAAAACAAATTCAAAA+AGG | + | chr4.2:3907837-3907856 | None:intergenic | 15.0% |
| !! | AATATTTAATGTTCAACTTT+GGG | - | chr4.2:3908555-3908574 | MS.gene06119:intron | 15.0% |
| !! | AGATATATTGAAAATATACT+AGG | + | chr4.2:3910669-3910688 | None:intergenic | 15.0% |
| !! | ATATTATTTCATTTATACCT+CGG | + | chr4.2:3908540-3908559 | None:intergenic | 15.0% |
| !! | TAATATTTAATGTTCAACTT+TGG | - | chr4.2:3908554-3908573 | MS.gene06119:intron | 15.0% |
| !!! | GTCATTTATTGATTTATAAT+AGG | - | chr4.2:3909847-3909866 | MS.gene06119:intron | 15.0% |
| !!! | TTTATAGAAACTTATTTTGA+TGG | - | chr4.2:3906791-3906810 | MS.gene06119:intron | 15.0% |
| !!! | TTTATTGATTTATAATAGGA+AGG | - | chr4.2:3909851-3909870 | MS.gene06119:intron | 15.0% |
| !!! | TTTTTTGTAAACGATATAAT+TGG | + | chr4.2:3910462-3910481 | None:intergenic | 15.0% |
| !! | AAAAAAAATAAGTGCAGAAA+AGG | + | chr4.2:3907943-3907962 | None:intergenic | 20.0% |
| !! | AGTATTCAACTTTAAACATT+TGG | - | chr4.2:3909618-3909637 | MS.gene06119:intron | 20.0% |
| !! | ATAGAATGCTAAATAATTTG+AGG | - | chr4.2:3909641-3909660 | MS.gene06119:intron | 20.0% |
| !! | ATATTAAGCATATAGACTTA+AGG | + | chr4.2:3909693-3909712 | None:intergenic | 20.0% |
| !! | ATCAGTTAAAATTAAAATGC+TGG | + | chr4.2:3907441-3907460 | None:intergenic | 20.0% |
| !! | ATTTAAATGCATTTCTACTT+GGG | - | chr4.2:3908940-3908959 | MS.gene06119:intron | 20.0% |
| !! | ATTTAGATGACTCATATATA+AGG | + | chr4.2:3908713-3908732 | None:intergenic | 20.0% |
| !! | GATATGTTAAAAAGAATTTC+AGG | - | chr4.2:3910041-3910060 | MS.gene06119:CDS | 20.0% |
| !! | GTGATATAGAATTAGTTAAA+AGG | - | chr4.2:3908226-3908245 | MS.gene06119:CDS | 20.0% |
| !! | TAAAATGTATGAAAAATCCT+TGG | + | chr4.2:3906522-3906541 | None:intergenic | 20.0% |
| !! | TATACATAAAGTGAACATTT+CGG | - | chr4.2:3908416-3908435 | MS.gene06119:CDS | 20.0% |
| !! | TATATCGTTTACAAAAAAAC+AGG | - | chr4.2:3910464-3910483 | MS.gene06119:CDS | 20.0% |
| !! | TCAGTTAAAATTAAAATGCT+GGG | + | chr4.2:3907440-3907459 | None:intergenic | 20.0% |
| !!! | AACTTTTTTCTACATATGTA+GGG | - | chr4.2:3910246-3910265 | MS.gene06119:intron | 20.0% |
| !!! | ATAATTAGTTTGATTGCAAA+AGG | + | chr4.2:3908078-3908097 | None:intergenic | 20.0% |
| !!! | ATCATTTCTGTTTTTATCTT+TGG | - | chr4.2:3907238-3907257 | MS.gene06119:CDS | 20.0% |
| !!! | TACTTTATCATTGTGATTTT+TGG | - | chr4.2:3910580-3910599 | MS.gene06119:CDS | 20.0% |
| !!! | TTCTGTTATTTGAACAAATA+AGG | - | chr4.2:3907104-3907123 | MS.gene06119:intron | 20.0% |
| ! | AAAACGATTCAAATCATGAA+CGG | + | chr4.2:3906774-3906793 | None:intergenic | 25.0% |
| ! | AAAGGTAAAACAATGAACAT+GGG | + | chr4.2:3908382-3908401 | None:intergenic | 25.0% |
| ! | AAATTACAGAAAGTAATAGC+AGG | + | chr4.2:3907395-3907414 | None:intergenic | 25.0% |
| ! | AAGATAAAGTCATTGTGTAA+AGG | + | chr4.2:3910014-3910033 | None:intergenic | 25.0% |
| ! | AATAAACTCACAAGTGATAT+AGG | + | chr4.2:3908315-3908334 | None:intergenic | 25.0% |
| ! | AATCAATAATAAGTCATGGA+TGG | + | chr4.2:3909580-3909599 | None:intergenic | 25.0% |
| ! | AATTACAGAAAGTAATAGCA+GGG | + | chr4.2:3907394-3907413 | None:intergenic | 25.0% |
| ! | ACAACCAATATTAGAAACTT+GGG | + | chr4.2:3907212-3907231 | None:intergenic | 25.0% |
| ! | ACTTGTATAAATCTACCATA+TGG | - | chr4.2:3909230-3909249 | MS.gene06119:intron | 25.0% |
| ! | ACTTGTGAGTTTATTATCTA+AGG | - | chr4.2:3908320-3908339 | MS.gene06119:intron | 25.0% |
| ! | AGAAATGCATTTAAATCAAC+AGG | + | chr4.2:3908936-3908955 | None:intergenic | 25.0% |
| ! | AGTTAAAATTAAAATGCTGG+GGG | + | chr4.2:3907438-3907457 | None:intergenic | 25.0% |
| ! | ATAAATCATAGCGCTTAAAA+GGG | + | chr4.2:3908187-3908206 | None:intergenic | 25.0% |
| ! | ATAGTTAACACAGTTCAAAT+AGG | + | chr4.2:3907175-3907194 | None:intergenic | 25.0% |
| ! | ATGCATATCTATGGAAAATT+AGG | - | chr4.2:3909515-3909534 | MS.gene06119:intron | 25.0% |
| ! | ATGTAATCGATATATGTTTG+TGG | + | chr4.2:3909978-3909997 | None:intergenic | 25.0% |
| ! | ATTTCGTGAAGTATATTACT+GGG | - | chr4.2:3907033-3907052 | MS.gene06119:intron | 25.0% |
| ! | CAGTTAAAATTAAAATGCTG+GGG | + | chr4.2:3907439-3907458 | None:intergenic | 25.0% |
| ! | CATCTAAATGTGTGTTTATT+AGG | - | chr4.2:3908724-3908743 | MS.gene06119:CDS | 25.0% |
| ! | CTTGTATAAATCTACCATAT+GGG | - | chr4.2:3909231-3909250 | MS.gene06119:intron | 25.0% |
| ! | GATTTAAATGCATTTCTACT+TGG | - | chr4.2:3908939-3908958 | MS.gene06119:intron | 25.0% |
| ! | GTTATATGATCTCAAATCAA+AGG | + | chr4.2:3907684-3907703 | None:intergenic | 25.0% |
| ! | TAACTGTGTTAATAAACTTC+AGG | + | chr4.2:3909483-3909502 | None:intergenic | 25.0% |
| ! | TACAACCAATATTAGAAACT+TGG | + | chr4.2:3907213-3907232 | None:intergenic | 25.0% |
| ! | TATATCTATAAGACGATGAA+AGG | + | chr4.2:3908400-3908419 | None:intergenic | 25.0% |
| ! | TCACAATCAATAATAAGTCA+TGG | + | chr4.2:3909584-3909603 | None:intergenic | 25.0% |
| ! | TTGTATAAATCTACCATATG+GGG | - | chr4.2:3909232-3909251 | MS.gene06119:intron | 25.0% |
| ! | TTTAAATGCATTTCTACTTG+GGG | - | chr4.2:3908941-3908960 | MS.gene06119:intron | 25.0% |
| !! | ACGTGTATTCTTATTTCAAA+GGG | - | chr4.2:3910692-3910711 | MS.gene06119:CDS | 25.0% |
| !! | AGTAATAAGCAATTTGGAAT+TGG | - | chr4.2:3910207-3910226 | MS.gene06119:intron | 25.0% |
| !! | ATTTCATTGATTGAGGAATA+CGG | - | chr4.2:3907323-3907342 | MS.gene06119:intron | 25.0% |
| !! | GTAATTTTATCCATTGTCAT+TGG | - | chr4.2:3907408-3907427 | MS.gene06119:intron | 25.0% |
| !! | GTTCATGATTTTCTATTCAA+CGG | - | chr4.2:3909797-3909816 | MS.gene06119:intron | 25.0% |
| !! | TACGTGTATTCTTATTTCAA+AGG | - | chr4.2:3910691-3910710 | MS.gene06119:CDS | 25.0% |
| !! | TATACATGTTTTCTAGATGT+TGG | - | chr4.2:3909750-3909769 | MS.gene06119:intron | 25.0% |
| !! | TCAAAGGTGTAGATTATTTA+AGG | + | chr4.2:3907668-3907687 | None:intergenic | 25.0% |
| !! | TGTTTGAAAGTGCAAAAATT+AGG | + | chr4.2:3908121-3908140 | None:intergenic | 25.0% |
| !!! | AAGCAAATACATTTTGATTC+TGG | + | chr4.2:3909327-3909346 | None:intergenic | 25.0% |
| !!! | ACTATTTTGAGAGTTATTCA+CGG | + | chr4.2:3907755-3907774 | None:intergenic | 25.0% |
| !!! | GAACTTTTTTCTACATATGT+AGG | - | chr4.2:3910245-3910264 | MS.gene06119:intron | 25.0% |
| !!! | GTTTTTATCTTTGGTTTTCA+GGG | - | chr4.2:3907247-3907266 | MS.gene06119:CDS | 25.0% |
| !!! | TGTTTTTATCTTTGGTTTTC+AGG | - | chr4.2:3907246-3907265 | MS.gene06119:CDS | 25.0% |
| !!! | TTTTTATCTTTGGTTTTCAG+GGG | - | chr4.2:3907248-3907267 | MS.gene06119:intron | 25.0% |
| AACTGATACTAGAGTTAATG+TGG | + | chr4.2:3909407-3909426 | None:intergenic | 30.0% | |
| ACAAATCGATCTCAAATGAA+TGG | + | chr4.2:3907626-3907645 | None:intergenic | 30.0% | |
| ACTCATATGAAACTTGCAAT+AGG | - | chr4.2:3910321-3910340 | MS.gene06119:CDS | 30.0% | |
| AGAATAAGATACTGCTAATG+TGG | - | chr4.2:3907516-3907535 | MS.gene06119:intron | 30.0% | |
| CAAATGTTACTGGAGATAAT+AGG | - | chr4.2:3909075-3909094 | MS.gene06119:intron | 30.0% | |
| CAGAAACAAAAGAGTAAGAA+AGG | + | chr4.2:3907089-3907108 | None:intergenic | 30.0% | |
| CATAAATCATAGCGCTTAAA+AGG | + | chr4.2:3908188-3908207 | None:intergenic | 30.0% | |
| CTATGGAAAATTAGGAACTT+AGG | - | chr4.2:3909523-3909542 | MS.gene06119:intron | 30.0% | |
| CTCAATCAATGAAATGAGAT+TGG | + | chr4.2:3907318-3907337 | None:intergenic | 30.0% | |
| CTCATATGAAACTTGCAATA+GGG | - | chr4.2:3910322-3910341 | MS.gene06119:CDS | 30.0% | |
| GAAAGGTAAAACAATGAACA+TGG | + | chr4.2:3908383-3908402 | None:intergenic | 30.0% | |
| GATCAAAGAATTTAATGAGC+AGG | + | chr4.2:3909017-3909036 | None:intergenic | 30.0% | |
| GATTTCGTGAAGTATATTAC+TGG | - | chr4.2:3907032-3907051 | MS.gene06119:intron | 30.0% | |
| GTGGTAAGTAATAAGCAATT+TGG | - | chr4.2:3910201-3910220 | MS.gene06119:intron | 30.0% | |
| TAAATCATAGCGCTTAAAAG+GGG | + | chr4.2:3908186-3908205 | None:intergenic | 30.0% | |
| TATCAGTTAAATTGAGTGCA+TGG | - | chr4.2:3909419-3909438 | MS.gene06119:intron | 30.0% | |
| TCATGAATACCTGAGTAAAA+TGG | + | chr4.2:3909376-3909395 | None:intergenic | 30.0% | |
| TGATTTATGAGATATACGCT+AGG | - | chr4.2:3908199-3908218 | MS.gene06119:CDS | 30.0% | |
| TTTCTGTTAAATGCACATGA+AGG | - | chr4.2:3909876-3909895 | MS.gene06119:intron | 30.0% | |
| ! | AATAAGCAATTTGGAATTGG+TGG | - | chr4.2:3910210-3910229 | MS.gene06119:intron | 30.0% |
| ! | ATTTGTTAACACAGAGAATC+TGG | + | chr4.2:3907572-3907591 | None:intergenic | 30.0% |
| ! | CAATCTCATTTCATTGATTG+AGG | - | chr4.2:3907316-3907335 | MS.gene06119:intron | 30.0% |
| ! | CATTCTATTTTACGATCTTC+GGG | + | chr4.2:3910832-3910851 | None:intergenic | 30.0% |
| ! | GCATTCTATTTTACGATCTT+CGG | + | chr4.2:3910833-3910852 | None:intergenic | 30.0% |
| ! | GTGAGTTTATTATCTAAGGT+TGG | - | chr4.2:3908324-3908343 | MS.gene06119:intron | 30.0% |
| ! | TTATTGATTGTGATCGTCTT+CGG | - | chr4.2:3909591-3909610 | MS.gene06119:intron | 30.0% |
| ! | TTTCATTGATTGAGGAATAC+GGG | - | chr4.2:3907324-3907343 | MS.gene06119:intron | 30.0% |
| ! | TTTGAGTACCTTTTATAGCT+AGG | - | chr4.2:3907873-3907892 | MS.gene06119:intron | 30.0% |
| !! | GGTTGCAGAATACTTATTTT+AGG | + | chr4.2:3908996-3909015 | None:intergenic | 30.0% |
| !! | TTGATCATCATTGATTCAGA+TGG | - | chr4.2:3909031-3909050 | MS.gene06119:intron | 30.0% |
| !!! | TTTTATCTTTGGTTTTCAGG+GGG | - | chr4.2:3907249-3907268 | MS.gene06119:intron | 30.0% |
| AAATCGCTATTATGCAAGGT+GGG | - | chr4.2:3908464-3908483 | MS.gene06119:intron | 35.0% | |
| AACAAACCTAATTACCCAGT+AGG | + | chr4.2:3907062-3907081 | None:intergenic | 35.0% | |
| AATGCATGAAAAGTTTGACG+TGG | - | chr4.2:3910490-3910509 | MS.gene06119:CDS | 35.0% | |
| AATTGCCTCCTTTCTAACAT+CGG | + | chr4.2:3909126-3909145 | None:intergenic | 35.0% | |
| AATTTCCGATGTTAGAAAGG+AGG | - | chr4.2:3909118-3909137 | MS.gene06119:CDS | 35.0% | |
| ACAATGTTGTGAAGTTAGGA+GGG | + | chr4.2:3908896-3908915 | None:intergenic | 35.0% | |
| ACACCAATCCTAGCTATAAA+AGG | + | chr4.2:3907884-3907903 | None:intergenic | 35.0% | |
| ACTTGAAAATACCTCATGTG+TGG | + | chr4.2:3909207-3909226 | None:intergenic | 35.0% | |
| ATACACAAAAGTCACATCCT+AGG | + | chr4.2:3910627-3910646 | None:intergenic | 35.0% | |
| ATAGTCACAATGTCATACCT+GGG | + | chr4.2:3910555-3910574 | None:intergenic | 35.0% | |
| ATATTACTGGGATTCCTACT+GGG | - | chr4.2:3907045-3907064 | MS.gene06119:intron | 35.0% | |
| ATTGGTTGTGATCCATCTTA+TGG | + | chr4.2:3910444-3910463 | None:intergenic | 35.0% | |
| CAAGTGCCAAAATTAATCAC+AGG | + | chr4.2:3907136-3907155 | None:intergenic | 35.0% | |
| CATCCACAAAGGAACAAAAT+TGG | + | chr4.2:3909350-3909369 | None:intergenic | 35.0% | |
| CCTTAAATCGCTATTATGCA+AGG | - | chr4.2:3908460-3908479 | MS.gene06119:CDS | 35.0% | |
| CCTTGCATAATAGCGATTTA+AGG | + | chr4.2:3908463-3908482 | None:intergenic | 35.0% | |
| CGATTAAGGTTCATTCTCTT+TGG | - | chr4.2:3906912-3906931 | MS.gene06119:CDS | 35.0% | |
| CTGAAGAAATTGCCATAAGA+TGG | - | chr4.2:3910429-3910448 | MS.gene06119:CDS | 35.0% | |
| CTTCAACACATGTTAGTTGA+AGG | - | chr4.2:3910368-3910387 | MS.gene06119:CDS | 35.0% | |
| CTTGAATATACACACCTCTT+AGG | - | chr4.2:3908353-3908372 | MS.gene06119:intron | 35.0% | |
| GATATGATCACGGTAAAACA+AGG | + | chr4.2:3908041-3908060 | None:intergenic | 35.0% | |
| GCAAATTTCCGATGTTAGAA+AGG | - | chr4.2:3909115-3909134 | MS.gene06119:CDS | 35.0% | |
| GTAGACAATGTTGTGAAGTT+AGG | + | chr4.2:3908900-3908919 | None:intergenic | 35.0% | |
| GTGCAGTATAGATATGATCA+CGG | + | chr4.2:3908051-3908070 | None:intergenic | 35.0% | |
| TAAAATGGCTTCATCCACAA+AGG | + | chr4.2:3909361-3909380 | None:intergenic | 35.0% | |
| TAAATCGCTATTATGCAAGG+TGG | - | chr4.2:3908463-3908482 | MS.gene06119:intron | 35.0% | |
| TACAATCAGTCAGATTCATG+TGG | + | chr4.2:3910741-3910760 | None:intergenic | 35.0% | |
| TAGAAAGGAGGCAATTAACT+CGG | - | chr4.2:3909130-3909149 | MS.gene06119:CDS | 35.0% | |
| TAGATATGCATGCACATTCA+AGG | + | chr4.2:3909506-3909525 | None:intergenic | 35.0% | |
| TATATTACTGGGATTCCTAC+TGG | - | chr4.2:3907044-3907063 | MS.gene06119:intron | 35.0% | |
| TCAACTAACATGTGTTGAAG+TGG | + | chr4.2:3910368-3910387 | None:intergenic | 35.0% | |
| TCCAGTAACATTTGCAAAGA+AGG | + | chr4.2:3909069-3909088 | None:intergenic | 35.0% | |
| TGAAAAAGACAGTTAGCAGA+AGG | + | chr4.2:3909269-3909288 | None:intergenic | 35.0% | |
| TGAATGTGCATGCATATCTA+TGG | - | chr4.2:3909506-3909525 | MS.gene06119:intron | 35.0% | |
| TTCTAACATCGGAAATTTGC+AGG | + | chr4.2:3909115-3909134 | None:intergenic | 35.0% | |
| TTGAGAGTTATTCACGGATT+TGG | + | chr4.2:3907749-3907768 | None:intergenic | 35.0% | |
| ! | AGTGATATAGGCACACATTT+TGG | + | chr4.2:3908303-3908322 | None:intergenic | 35.0% |
| ! | CAGTTAGACTAGTCATTTGA+TGG | + | chr4.2:3907796-3907815 | None:intergenic | 35.0% |
| ! | CTCTTTGGAAAAACTTGAGT+AGG | - | chr4.2:3906927-3906946 | MS.gene06119:CDS | 35.0% |
| ! | CTTCCAATTTTGTTCCTTTG+TGG | - | chr4.2:3909344-3909363 | MS.gene06119:intron | 35.0% |
| ! | GTACCTTTTATAGCTAGGAT+TGG | - | chr4.2:3907878-3907897 | MS.gene06119:intron | 35.0% |
| ! | TCCATGCCTGTGATTAATTT+TGG | - | chr4.2:3907127-3907146 | MS.gene06119:intron | 35.0% |
| ! | TGACTTTTGTGTATGATGAC+TGG | - | chr4.2:3910633-3910652 | MS.gene06119:CDS | 35.0% |
| ! | TTAGGTCATCTTTTACTCCA+TGG | + | chr4.2:3908978-3908997 | None:intergenic | 35.0% |
| ! | TTGAAGGCCTTGTAAAATCA+GGG | - | chr4.2:3910384-3910403 | MS.gene06119:CDS | 35.0% |
| !! | GTCTTTTTCATACTTCCAGA+AGG | - | chr4.2:3909279-3909298 | MS.gene06119:intron | 35.0% |
| !!! | ACCTCAGGGTTTTTTACTTT+AGG | + | chr4.2:3906881-3906900 | None:intergenic | 35.0% |
| !!! | ATACATTTTGATTCTGGTGC+AGG | + | chr4.2:3909321-3909340 | None:intergenic | 35.0% |
| !!! | ATCATTGTGATTTTTGGTCC+AGG | - | chr4.2:3910586-3910605 | MS.gene06119:CDS | 35.0% |
| !!! | GAAACTTATTTTGATGGTGC+AGG | - | chr4.2:3906797-3906816 | MS.gene06119:intron | 35.0% |
| !!! | TACATTTTGATTCTGGTGCA+GGG | + | chr4.2:3909320-3909339 | None:intergenic | 35.0% |
| !!! | TCATTGTGATTTTTGGTCCA+GGG | - | chr4.2:3910587-3910606 | MS.gene06119:CDS | 35.0% |
| AATCTTCCTAAATCCTCGAC+TGG | - | chr4.2:3906740-3906759 | MS.gene06119:intron | 40.0% | |
| AATGTGGAATCAATGTGCTG+TGG | - | chr4.2:3907532-3907551 | MS.gene06119:intron | 40.0% | |
| ACATATGTAGGGAGCAGAAA+AGG | - | chr4.2:3910257-3910276 | MS.gene06119:intron | 40.0% | |
| ACCAATCAACAGCGTAATCT+AGG | + | chr4.2:3909731-3909750 | None:intergenic | 40.0% | |
| ACTTTAGGCAAAAAACCCTC+AGG | + | chr4.2:3906866-3906885 | None:intergenic | 40.0% | |
| AGGTTTCTCATATGTTTCCC+TGG | + | chr4.2:3910607-3910626 | None:intergenic | 40.0% | |
| ATAACAACAGAACCAGGAAC+AGG | + | chr4.2:3907001-3907020 | None:intergenic | 40.0% | |
| ATCAACAGCGTAATCTAGGA+CGG | + | chr4.2:3909727-3909746 | None:intergenic | 40.0% | |
| ATCAGTCAGATTCATGTGGA+AGG | + | chr4.2:3910737-3910756 | None:intergenic | 40.0% | |
| ATGTGCTGTGGTGTGAAATA+CGG | - | chr4.2:3907544-3907563 | MS.gene06119:intron | 40.0% | |
| ATTGCCGAATGTGTTGAATG+CGG | + | chr4.2:3906645-3906664 | None:intergenic | 40.0% | |
| ATTTCAGCACAAGATGGATG+AGG | - | chr4.2:3908682-3908701 | MS.gene06119:CDS | 40.0% | |
| ATTTCGAGAAAGGATACGAG+TGG | + | chr4.2:3906611-3906630 | None:intergenic | 40.0% | |
| CAGGTATGACATTGTGACTA+TGG | - | chr4.2:3910554-3910573 | MS.gene06119:CDS | 40.0% | |
| CATAGTCACAATGTCATACC+TGG | + | chr4.2:3910556-3910575 | None:intergenic | 40.0% | |
| CTAGAGCATACTACACTAAC+AGG | - | chr4.2:3907363-3907382 | MS.gene06119:intron | 40.0% | |
| GAAGCAGAGTATGGTAGTTA+GGG | + | chr4.2:3906979-3906998 | None:intergenic | 40.0% | |
| GAATACGGGTTTGTGCTTAA+TGG | - | chr4.2:3907338-3907357 | MS.gene06119:intron | 40.0% | |
| GACAATGTTGTGAAGTTAGG+AGG | + | chr4.2:3908897-3908916 | None:intergenic | 40.0% | |
| GATTCCACGCATTAAATGCA+TGG | + | chr4.2:3907727-3907746 | None:intergenic | 40.0% | |
| GATTGTATTGCAATGCAGAC+TGG | - | chr4.2:3910754-3910773 | MS.gene06119:CDS | 40.0% | |
| GCAACTTCTTTGAGTGATTC+AGG | - | chr4.2:3910172-3910191 | MS.gene06119:intron | 40.0% | |
| GCCAAAATTAATCACAGGCA+TGG | + | chr4.2:3907131-3907150 | None:intergenic | 40.0% | |
| GCCTAAAGTAAAAAACCCTG+AGG | - | chr4.2:3906877-3906896 | MS.gene06119:CDS | 40.0% | |
| GCCTTCTTTGCAAATGTTAC+TGG | - | chr4.2:3909065-3909084 | MS.gene06119:intron | 40.0% | |
| GGAATGCAAACATGAACCAA+TGG | - | chr4.2:3909159-3909178 | MS.gene06119:CDS | 40.0% | |
| GGGAAACATATGAGAAACCT+AGG | - | chr4.2:3910607-3910626 | MS.gene06119:CDS | 40.0% | |
| GTCGCCCAAGTTTCTAATAT+TGG | - | chr4.2:3907205-3907224 | MS.gene06119:CDS | 40.0% | |
| GTGTGGTATGTTAATAACCG+AGG | - | chr4.2:3908520-3908539 | MS.gene06119:intron | 40.0% | |
| GTGTTGGAGAATTTCGAGAA+AGG | + | chr4.2:3906621-3906640 | None:intergenic | 40.0% | |
| TAATTCCATGCCATAGGACA+AGG | - | chr4.2:3908578-3908597 | MS.gene06119:intron | 40.0% | |
| TACAGTGACAGCATCAACTA+TGG | - | chr4.2:3906562-3906581 | MS.gene06119:CDS | 40.0% | |
| TAGTCACAATGTCATACCTG+GGG | + | chr4.2:3910554-3910573 | None:intergenic | 40.0% | |
| TATCCCAAACTTGAACCTTC+TGG | + | chr4.2:3909297-3909316 | None:intergenic | 40.0% | |
| TATGAGATATACGCTAGGAC+TGG | - | chr4.2:3908204-3908223 | MS.gene06119:CDS | 40.0% | |
| TCCTAGATTACGCTGTTGAT+TGG | - | chr4.2:3909727-3909746 | MS.gene06119:intron | 40.0% | |
| TCGAGGATTTAGGAAGATTC+TGG | + | chr4.2:3906739-3906758 | None:intergenic | 40.0% | |
| TTTGAGAGGTAAATCGACGT+AGG | + | chr4.2:3906687-3906706 | None:intergenic | 40.0% | |
| TTTGGGTAATTCCATGCCAT+AGG | - | chr4.2:3908572-3908591 | MS.gene06119:intron | 40.0% | |
| ! | ACTTCCAGAAGGTTCAAGTT+TGG | - | chr4.2:3909290-3909309 | MS.gene06119:intron | 40.0% |
| ! | AGGCAATTAACTCGGTTTTC+TGG | - | chr4.2:3909138-3909157 | MS.gene06119:CDS | 40.0% |
| ! | AGTTGATGCTGTCACTGTAA+CGG | + | chr4.2:3906561-3906580 | None:intergenic | 40.0% |
| ! | CGATATATGTTTGTGGACTG+CGG | + | chr4.2:3909971-3909990 | None:intergenic | 40.0% |
| ! | CTTCCAACCCTGATTTTACA+AGG | + | chr4.2:3910394-3910413 | None:intergenic | 40.0% |
| ! | CTTCCAGAAGGTTCAAGTTT+GGG | - | chr4.2:3909291-3909310 | MS.gene06119:intron | 40.0% |
| ! | CTTTTGTGTATGATGACTGG+AGG | - | chr4.2:3910636-3910655 | MS.gene06119:CDS | 40.0% |
| ! | GGTAAATCGACGTAGGTTTT+AGG | + | chr4.2:3906680-3906699 | None:intergenic | 40.0% |
| ! | GTTGAAGGCCTTGTAAAATC+AGG | - | chr4.2:3910383-3910402 | MS.gene06119:CDS | 40.0% |
| !! | TACTGAAAGAGCACGAGTTT+TGG | - | chr4.2:3908262-3908281 | MS.gene06119:CDS | 40.0% |
| !! | TGGATGAAGCCATTTTACTC+AGG | - | chr4.2:3909364-3909383 | MS.gene06119:intron | 40.0% |
| !! | TTCTGAAACAGTCCTGAACT+TGG | + | chr4.2:3908613-3908632 | None:intergenic | 40.0% |
| !!! | ATTGCAATGCAGACTGGTTT+TGG | - | chr4.2:3910760-3910779 | MS.gene06119:CDS | 40.0% |
| AAGGATACGAGTGGAGTTGA+AGG | + | chr4.2:3906602-3906621 | None:intergenic | 45.0% | |
| AATCAGGGTTGGAAGAAGCA+AGG | - | chr4.2:3910399-3910418 | MS.gene06119:CDS | 45.0% | |
| ACATACCACACACACCATTG+TGG | + | chr4.2:3908511-3908530 | None:intergenic | 45.0% | |
| ACTGAACCAGTCGAGGATTT+AGG | + | chr4.2:3906749-3906768 | None:intergenic | 45.0% | |
| AGGTACTCAAATAAGTCGCG+TGG | + | chr4.2:3907864-3907883 | None:intergenic | 45.0% | |
| ATCAGCTGCTGAATCAGGAT+GGG | - | chr4.2:3908659-3908678 | MS.gene06119:intron | 45.0% | |
| ATCATAGCGCTTAAAAGGGG+AGG | + | chr4.2:3908183-3908202 | None:intergenic | 45.0% | |
| ATGAACATGGGCAACCTAAG+AGG | + | chr4.2:3908370-3908389 | None:intergenic | 45.0% | |
| ATGTGTTGAATGCGGTGTGT+TGG | + | chr4.2:3906637-3906656 | None:intergenic | 45.0% | |
| ATTGCGGAGAATTTGGAGGT+GGG | - | chr4.2:3910516-3910535 | MS.gene06119:CDS | 45.0% | |
| CAAATTCCCCCTTTCCGATA+CGG | - | chr4.2:3906703-3906722 | MS.gene06119:intron | 45.0% | |
| CACACCGCATTCAACACATT+CGG | - | chr4.2:3906638-3906657 | MS.gene06119:intron | 45.0% | |
| CATGGCGTAGCAATTCATCT+TGG | + | chr4.2:3907709-3907728 | None:intergenic | 45.0% | |
| CTCGAAAGTCTCAAAACCTC+TGG | - | chr4.2:3910127-3910146 | MS.gene06119:intron | 45.0% | |
| GAGCATACTACACTAACAGG+AGG | - | chr4.2:3907366-3907385 | MS.gene06119:intron | 45.0% | |
| GATGGGATTTCAGCACAAGA+TGG | - | chr4.2:3908676-3908695 | MS.gene06119:CDS | 45.0% | |
| GGAAGCAGAGTATGGTAGTT+AGG | + | chr4.2:3906980-3906999 | None:intergenic | 45.0% | |
| GGGATTCCTACTGGGTAATT+AGG | - | chr4.2:3907053-3907072 | MS.gene06119:intron | 45.0% | |
| GTGAACATTTCGGATGCTCA+AGG | - | chr4.2:3908426-3908445 | MS.gene06119:CDS | 45.0% | |
| GTGCATTGCTTACACACACT+AGG | + | chr4.2:3908753-3908772 | None:intergenic | 45.0% | |
| TACGCCATGCATTTAATGCG+TGG | - | chr4.2:3907720-3907739 | MS.gene06119:intron | 45.0% | |
| TGAACCAATGGCTTGATTCC+TGG | - | chr4.2:3909171-3909190 | MS.gene06119:CDS | 45.0% | |
| TGGCATTCTTGGAGGAGTTT+GGG | - | chr4.2:3910803-3910822 | MS.gene06119:CDS | 45.0% | |
| ! | AGGCCTTGTAAAATCAGGGT+TGG | - | chr4.2:3910388-3910407 | MS.gene06119:CDS | 45.0% |
| !! | GAGTAGGAAAGTATCCACTG+AGG | - | chr4.2:3906943-3906962 | MS.gene06119:CDS | 45.0% |
| !!! | ACTGGTTTTGGCTGGTCAAA+TGG | - | chr4.2:3910772-3910791 | MS.gene06119:CDS | 45.0% |
| !!! | GAGCACGAGTTTTGGAATTC+AGG | - | chr4.2:3908270-3908289 | MS.gene06119:CDS | 45.0% |
| !!! | TTTGGTTTTCAGGGGGTTGT+TGG | - | chr4.2:3907256-3907275 | MS.gene06119:intron | 45.0% |
| AAAACCCTGAGGTCAGAGCA+TGG | - | chr4.2:3906888-3906907 | MS.gene06119:CDS | 50.0% | |
| AAACCCTGAGGTCAGAGCAT+GGG | - | chr4.2:3906889-3906908 | MS.gene06119:CDS | 50.0% | |
| AAGCGTGATCCGTATCGGAA+AGG | + | chr4.2:3906715-3906734 | None:intergenic | 50.0% | |
| AAGGCCAGAATCGTCCACAA+TGG | - | chr4.2:3908494-3908513 | MS.gene06119:intron | 50.0% | |
| ACTTCACGAAATCGCGAACC+AGG | + | chr4.2:3907025-3907044 | None:intergenic | 50.0% | |
| AGATGCCTTGTCCTATGGCA+TGG | + | chr4.2:3908586-3908605 | None:intergenic | 50.0% | |
| AGCGTGATCCGTATCGGAAA+GGG | + | chr4.2:3906714-3906733 | None:intergenic | 50.0% | |
| AGGCATCTGCTTCCAAGTTC+AGG | - | chr4.2:3908598-3908617 | MS.gene06119:intron | 50.0% | |
| ATAGGGACTTCCCGAATGGT+TGG | - | chr4.2:3910339-3910358 | MS.gene06119:CDS | 50.0% | |
| ATCGTCCACAATGGTGTGTG+TGG | - | chr4.2:3908503-3908522 | MS.gene06119:intron | 50.0% | |
| ATGCAAGGTGGGACAAACCA+AGG | - | chr4.2:3908475-3908494 | MS.gene06119:intron | 50.0% | |
| ATGTGTGGTATTGCTGAGCC+AGG | + | chr4.2:3909192-3909211 | None:intergenic | 50.0% | |
| ATTGTGGACGATTCTGGCCT+TGG | + | chr4.2:3908495-3908514 | None:intergenic | 50.0% | |
| CACACCATTGTGGACGATTC+TGG | + | chr4.2:3908501-3908520 | None:intergenic | 50.0% | |
| CAGCAGCTGATGCTAGTTCA+CGG | + | chr4.2:3908650-3908669 | None:intergenic | 50.0% | |
| CAGGAACAGGAAGCAGAGTA+TGG | + | chr4.2:3906988-3907007 | None:intergenic | 50.0% | |
| CATACTCTGCTTCCTGTTCC+TGG | - | chr4.2:3906986-3907005 | MS.gene06119:CDS | 50.0% | |
| CATCAGCTGCTGAATCAGGA+TGG | - | chr4.2:3908658-3908677 | MS.gene06119:intron | 50.0% | |
| CATTCTTGGAGGAGTTTGGG+TGG | - | chr4.2:3910806-3910825 | MS.gene06119:CDS | 50.0% | |
| CATTGCGGAGAATTTGGAGG+TGG | - | chr4.2:3910515-3910534 | MS.gene06119:CDS | 50.0% | |
| CCAGGGATAACAACAGAACC+AGG | + | chr4.2:3907007-3907026 | None:intergenic | 50.0% | |
| CTAGCATCAGCTGCTGAATC+AGG | - | chr4.2:3908654-3908673 | MS.gene06119:intron | 50.0% | |
| CTGGCATTCTTGGAGGAGTT+TGG | - | chr4.2:3910802-3910821 | MS.gene06119:CDS | 50.0% | |
| CTGGTCAAATGGAGTTGTGC+TGG | - | chr4.2:3910783-3910802 | MS.gene06119:CDS | 50.0% | |
| CTTCACGAAATCGCGAACCA+GGG | + | chr4.2:3907024-3907043 | None:intergenic | 50.0% | |
| GAAGCAGATGCCTTGTCCTA+TGG | + | chr4.2:3908591-3908610 | None:intergenic | 50.0% | |
| GCAAAAAACCCTCAGGCTCA+GGG | + | chr4.2:3906859-3906878 | None:intergenic | 50.0% | |
| GCTCAGCAATACCACACATG+AGG | - | chr4.2:3909193-3909212 | MS.gene06119:intron | 50.0% | |
| GTTGGAAGAAGCAAGGTCGT+TGG | - | chr4.2:3910406-3910425 | MS.gene06119:CDS | 50.0% | |
| TAGGGACTTCCCGAATGGTT+GGG | - | chr4.2:3910340-3910359 | MS.gene06119:CDS | 50.0% | |
| TCGGAAAGGGGGAATTTGAG+AGG | + | chr4.2:3906701-3906720 | None:intergenic | 50.0% | |
| TCGTGCTCTTTCAGTAGTGC+AGG | + | chr4.2:3908258-3908277 | None:intergenic | 50.0% | |
| TCTCGTGTACTCTGATCCAG+AGG | - | chr4.2:3906826-3906845 | MS.gene06119:CDS | 50.0% | |
| TGAAGTGGAGCCCAACCATT+CGG | + | chr4.2:3910353-3910372 | None:intergenic | 50.0% | |
| TGAGCCAGGAATCAAGCCAT+TGG | + | chr4.2:3909178-3909197 | None:intergenic | 50.0% | |
| TGAGTGATTCAGGACAGCAG+TGG | - | chr4.2:3910182-3910201 | MS.gene06119:intron | 50.0% | |
| TGCAATAGGGACTTCCCGAA+TGG | - | chr4.2:3910335-3910354 | MS.gene06119:CDS | 50.0% | |
| TTGCGGAGAATTTGGAGGTG+GGG | - | chr4.2:3910517-3910536 | MS.gene06119:CDS | 50.0% | |
| TTGGGGTAAGTTGCAGACCA+TGG | - | chr4.2:3908958-3908977 | MS.gene06119:intron | 50.0% | |
| ! | AGTTGTGCTGGCATTCTTGG+AGG | - | chr4.2:3910795-3910814 | MS.gene06119:CDS | 50.0% |
| ! | CTGGAAAGCGTGATCCGTAT+CGG | + | chr4.2:3906720-3906739 | None:intergenic | 50.0% |
| ! | GATTTTGTCCCTGAGCCTGA+GGG | - | chr4.2:3906848-3906867 | MS.gene06119:CDS | 50.0% |
| ! | TGGAGTTGTGCTGGCATTCT+TGG | - | chr4.2:3910792-3910811 | MS.gene06119:CDS | 50.0% |
| !! | CCTGGTTCTGTTGTTATCCC+TGG | - | chr4.2:3907004-3907023 | MS.gene06119:CDS | 50.0% |
| !!! | CAATGCAGACTGGTTTTGGC+TGG | - | chr4.2:3910764-3910783 | MS.gene06119:CDS | 50.0% |
| AACGGACACTGAACCAGTCG+AGG | + | chr4.2:3906756-3906775 | None:intergenic | 55.0% | |
| AGGGTGAGTCTTGACCTCAG+TGG | + | chr4.2:3906960-3906979 | None:intergenic | 55.0% | |
| CGTGATCCGTATCGGAAAGG+GGG | + | chr4.2:3906712-3906731 | None:intergenic | 55.0% | |
| GAAGTGGAGCCCAACCATTC+GGG | + | chr4.2:3910352-3910371 | None:intergenic | 55.0% | |
| GCGTGATCCGTATCGGAAAG+GGG | + | chr4.2:3906713-3906732 | None:intergenic | 55.0% | |
| GGCAAAAAACCCTCAGGCTC+AGG | + | chr4.2:3906860-3906879 | None:intergenic | 55.0% | |
| GGCTAAGACAGCTCCCCATA+TGG | + | chr4.2:3909248-3909267 | None:intergenic | 55.0% | |
| GGCTCAGGGACAAAATCCTC+TGG | + | chr4.2:3906845-3906864 | None:intergenic | 55.0% | |
| GGTCAGAGCATGGGCGATTA+AGG | - | chr4.2:3906898-3906917 | MS.gene06119:CDS | 55.0% | |
| TAGCGCTTAAAAGGGGAGGC+TGG | + | chr4.2:3908179-3908198 | None:intergenic | 55.0% | |
| TGCGGAGAATTTGGAGGTGG+GGG | - | chr4.2:3910518-3910537 | MS.gene06119:CDS | 55.0% | |
| TGGGGGTGAATATGTACCCC+AGG | - | chr4.2:3910535-3910554 | MS.gene06119:CDS | 55.0% | |
| ! | GGATTTTGTCCCTGAGCCTG+AGG | - | chr4.2:3906847-3906866 | MS.gene06119:CDS | 55.0% |
| ! | TGGGGGTGCACCAATGACAA+TGG | + | chr4.2:3907421-3907440 | None:intergenic | 55.0% |
| ! | TGTGGACTGCGGTGCATGTT+TGG | + | chr4.2:3909960-3909979 | None:intergenic | 55.0% |
| ATCGCCCATGCTCTGACCTC+AGG | + | chr4.2:3906896-3906915 | None:intergenic | 60.0% | |
| CAACTCCAGCAGCACGAAGC+AGG | + | chr4.2:3910153-3910172 | None:intergenic | 60.0% | |
| TCGCCCATGCTCTGACCTCA+GGG | + | chr4.2:3906895-3906914 | None:intergenic | 60.0% | |
| AGCAGCACGAAGCAGGCCAG+AGG | + | chr4.2:3910146-3910165 | None:intergenic | 65.0% | |
| TCTGGCCTGCTTCGTGCTGC+TGG | - | chr4.2:3910145-3910164 | MS.gene06119:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 3906515 | 3910855 | 3906515 | ID=MS.gene06119 |
| chr4.2 | mRNA | 3906515 | 3910855 | 3906515 | ID=MS.gene06119.t1;Parent=MS.gene06119 |
| chr4.2 | exon | 3910296 | 3910855 | 3910296 | ID=MS.gene06119.t1.exon1;Parent=MS.gene06119.t1 |
| chr4.2 | CDS | 3910296 | 3910855 | 3910296 | ID=cds.MS.gene06119.t1;Parent=MS.gene06119.t1 |
| chr4.2 | exon | 3909983 | 3910102 | 3909983 | ID=MS.gene06119.t1.exon2;Parent=MS.gene06119.t1 |
| chr4.2 | CDS | 3909983 | 3910102 | 3909983 | ID=cds.MS.gene06119.t1;Parent=MS.gene06119.t1 |
| chr4.2 | exon | 3909079 | 3909194 | 3909079 | ID=MS.gene06119.t1.exon3;Parent=MS.gene06119.t1 |
| chr4.2 | CDS | 3909079 | 3909194 | 3909079 | ID=cds.MS.gene06119.t1;Parent=MS.gene06119.t1 |
| chr4.2 | exon | 3908855 | 3908955 | 3908855 | ID=MS.gene06119.t1.exon4;Parent=MS.gene06119.t1 |
| chr4.2 | CDS | 3908855 | 3908955 | 3908855 | ID=cds.MS.gene06119.t1;Parent=MS.gene06119.t1 |
| chr4.2 | exon | 3908667 | 3908776 | 3908667 | ID=MS.gene06119.t1.exon5;Parent=MS.gene06119.t1 |
| chr4.2 | CDS | 3908667 | 3908776 | 3908667 | ID=cds.MS.gene06119.t1;Parent=MS.gene06119.t1 |
| chr4.2 | exon | 3908408 | 3908480 | 3908408 | ID=MS.gene06119.t1.exon6;Parent=MS.gene06119.t1 |
| chr4.2 | CDS | 3908408 | 3908480 | 3908408 | ID=cds.MS.gene06119.t1;Parent=MS.gene06119.t1 |
| chr4.2 | exon | 3908156 | 3908320 | 3908156 | ID=MS.gene06119.t1.exon7;Parent=MS.gene06119.t1 |
| chr4.2 | CDS | 3908156 | 3908320 | 3908156 | ID=cds.MS.gene06119.t1;Parent=MS.gene06119.t1 |
| chr4.2 | exon | 3907985 | 3908072 | 3907985 | ID=MS.gene06119.t1.exon8;Parent=MS.gene06119.t1 |
| chr4.2 | CDS | 3907985 | 3908072 | 3907985 | ID=cds.MS.gene06119.t1;Parent=MS.gene06119.t1 |
| chr4.2 | exon | 3907167 | 3907266 | 3907167 | ID=MS.gene06119.t1.exon9;Parent=MS.gene06119.t1 |
| chr4.2 | CDS | 3907167 | 3907266 | 3907167 | ID=cds.MS.gene06119.t1;Parent=MS.gene06119.t1 |
| chr4.2 | exon | 3906814 | 3907027 | 3906814 | ID=MS.gene06119.t1.exon10;Parent=MS.gene06119.t1 |
| chr4.2 | CDS | 3906814 | 3907027 | 3906814 | ID=cds.MS.gene06119.t1;Parent=MS.gene06119.t1 |
| chr4.2 | exon | 3906515 | 3906598 | 3906515 | ID=MS.gene06119.t1.exon11;Parent=MS.gene06119.t1 |
| chr4.2 | CDS | 3906515 | 3906598 | 3906515 | ID=cds.MS.gene06119.t1;Parent=MS.gene06119.t1 |
| Gene Sequence |
| Protein sequence |
