Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55838.t1 | KEH21288.1 | 95 | 580 | 25 | 2 | 1 | 576 | 1 | 580 | 0.00E+00 | 1130.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55838.t1 | Q9SU50 | 58.6 | 553 | 224 | 4 | 27 | 575 | 74 | 625 | 8.2e-193 | 674.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55838.t1 | A0A072TWM8 | 95.0 | 580 | 25 | 2 | 1 | 576 | 1 | 580 | 0.0e+00 | 1130.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene06119 | MS.gene55838 | 0.886353 | 3.68E-72 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene06185 | MS.gene55838 | PPI |
| MS.gene20170 | MS.gene55838 | PPI |
| MS.gene55838 | MS.gene030278 | PPI |
| MS.gene55838 | MS.gene049012 | PPI |
| MS.gene55838 | MS.gene55873 | PPI |
| MS.gene66304 | MS.gene55838 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55838.t1 | MTR_8g099985 | 94.483 | 580 | 28 | 1 | 1 | 576 | 1 | 580 | 0.0 | 1120 |
| MS.gene55838.t1 | MTR_8g099985 | 97.101 | 552 | 16 | 0 | 25 | 576 | 2 | 553 | 0.0 | 1115 |
| MS.gene55838.t1 | MTR_8g099985 | 94.310 | 580 | 28 | 2 | 1 | 576 | 1 | 579 | 0.0 | 1114 |
| MS.gene55838.t1 | MTR_8g099985 | 96.920 | 552 | 16 | 1 | 25 | 576 | 2 | 552 | 0.0 | 1108 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene55838.t1 | AT4G24040 | 57.645 | 569 | 233 | 5 | 15 | 576 | 59 | 626 | 0.0 | 654 |
Find 142 sgRNAs with CRISPR-Local
Find 298 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATAAATCATAGCGCTTAAA+AGG | 0.150099 | 4.3:+4126585 | None:intergenic |
| GGGATTCCTACTGGGTAATT+AGG | 0.188185 | 4.3:-4127717 | MS.gene55838:intron |
| GTGGAACATTGCGGAGAATT+TGG | 0.215201 | 4.3:-4124261 | MS.gene55838:CDS |
| CATACTCTGCTTCCTGTTCC+TGG | 0.232512 | 4.3:-4127784 | MS.gene55838:CDS |
| CCTTGCATAATAGCGATTTA+AGG | 0.232755 | 4.3:+4126310 | None:intergenic |
| GCAACTTCTTTGAGTGATTC+AGG | 0.233453 | 4.3:-4124598 | MS.gene55838:CDS |
| GCCTTCTTTGCAAATGTTAC+TGG | 0.243160 | 4.3:-4125705 | MS.gene55838:CDS |
| CGATTAAGGTTCATTCTCTT+TGG | 0.245075 | 4.3:-4127858 | MS.gene55838:CDS |
| CTGGCATTCTTGGAGGAGTT+TGG | 0.263221 | 4.3:-4123968 | MS.gene55838:CDS |
| GGAAGCAGAGTATGGTAGTT+AGG | 0.277116 | 4.3:+4127793 | None:intergenic |
| TCGAGGATTTAGGAAGATTC+TGG | 0.291598 | 4.3:+4128034 | None:intergenic |
| CACACCATTGTGGACGATTC+TGG | 0.297697 | 4.3:+4126272 | None:intergenic |
| TGGCATTCTTGGAGGAGTTT+GGG | 0.304022 | 4.3:-4123967 | MS.gene55838:CDS |
| ATTGGTTGTGATCCATCTTA+TGG | 0.308508 | 4.3:+4124329 | None:intergenic |
| ACTGAACCAGTCGAGGATTT+AGG | 0.309319 | 4.3:+4128024 | None:intergenic |
| TGGAGTTGTGCTGGCATTCT+TGG | 0.309506 | 4.3:-4123978 | MS.gene55838:CDS |
| TTCTAACATCGGAAATTTGC+AGG | 0.312438 | 4.3:+4125658 | None:intergenic |
| ATTGCAATGCAGACTGGTTT+TGG | 0.312604 | 4.3:-4124010 | MS.gene55838:intron |
| ATTGTGGACGATTCTGGCCT+TGG | 0.323742 | 4.3:+4126278 | None:intergenic |
| CATCCACAAAGGAACAAAAT+TGG | 0.326919 | 4.3:+4125423 | None:intergenic |
| CTTCCAGAAGGTTCAAGTTT+GGG | 0.328084 | 4.3:-4125479 | MS.gene55838:intron |
| TACTGAAAGAGCACGAGTTT+TGG | 0.328407 | 4.3:-4126508 | MS.gene55838:CDS |
| ACTTCCAGAAGGTTCAAGTT+TGG | 0.328806 | 4.3:-4125480 | MS.gene55838:intron |
| TCATGAATACCTGAGTAAAA+TGG | 0.329622 | 4.3:+4125397 | None:intergenic |
| TCTGGCCTGCTTCGTGCTGC+TGG | 0.332816 | 4.3:-4124625 | MS.gene55838:CDS |
| GGTCAGAGCATGGGCGATTA+AGG | 0.337495 | 4.3:-4127872 | MS.gene55838:CDS |
| TGAACCAATGGCTTGATTCC+TGG | 0.337512 | 4.3:-4125599 | MS.gene55838:CDS |
| GAATACGGGTTTGTGCTTAA+TGG | 0.346920 | 4.3:-4127432 | MS.gene55838:CDS |
| GTTGAAGGCCTTGTAAAATC+AGG | 0.348652 | 4.3:-4124387 | MS.gene55838:CDS |
| CAAATGTTACTGGAGATAAT+AGG | 0.358114 | 4.3:-4125695 | MS.gene55838:CDS |
| GATTTAAATGCATTTCTACT+TGG | 0.364005 | 4.3:-4125831 | MS.gene55838:CDS |
| CTAGCATCAGCTGCTGAATC+AGG | 0.368826 | 4.3:-4126116 | MS.gene55838:CDS |
| AGGCATCTGCTTCCAAGTTC+AGG | 0.372013 | 4.3:-4126172 | MS.gene55838:CDS |
| ATCGCCCATGCTCTGACCTC+AGG | 0.375305 | 4.3:+4127877 | None:intergenic |
| CCTGGTTCTGTTGTTATCCC+TGG | 0.380817 | 4.3:-4127766 | MS.gene55838:CDS |
| CAATCTCATTTCATTGATTG+AGG | 0.383699 | 4.3:-4127454 | MS.gene55838:CDS |
| AGAAATGCATTTAAATCAAC+AGG | 0.395594 | 4.3:+4125837 | None:intergenic |
| ATTTCATTGATTGAGGAATA+CGG | 0.395655 | 4.3:-4127447 | MS.gene55838:CDS |
| TCCAGTAACATTTGCAAAGA+AGG | 0.405233 | 4.3:+4125704 | None:intergenic |
| CAGGAACAGGAAGCAGAGTA+TGG | 0.406552 | 4.3:+4127785 | None:intergenic |
| GTAGACAATGTTGTGAAGTT+AGG | 0.407549 | 4.3:+4125873 | None:intergenic |
| TACAGTGACAGCATCAACTA+TGG | 0.410643 | 4.3:-4128208 | MS.gene55838:CDS |
| ATTTAAATGCATTTCTACTT+GGG | 0.415801 | 4.3:-4125830 | MS.gene55838:CDS |
| TATATTACTGGGATTCCTAC+TGG | 0.417297 | 4.3:-4127726 | MS.gene55838:CDS |
| AGCGTGATCCGTATCGGAAA+GGG | 0.420355 | 4.3:+4128059 | None:intergenic |
| GATTTCGTGAAGTATATTAC+TGG | 0.429451 | 4.3:-4127738 | MS.gene55838:CDS |
| GCAAATTTCCGATGTTAGAA+AGG | 0.431097 | 4.3:-4125655 | MS.gene55838:CDS |
| CTAGAGCATACTACACTAAC+AGG | 0.433578 | 4.3:-4127407 | MS.gene55838:CDS |
| CTCAATCAATGAAATGAGAT+TGG | 0.439063 | 4.3:+4127455 | None:intergenic |
| GAAGTGGAGCCCAACCATTC+GGG | 0.440275 | 4.3:+4124421 | None:intergenic |
| CTTCAACACATGTTAGTTGA+AGG | 0.440568 | 4.3:-4124402 | MS.gene55838:CDS |
| TGAAGTGGAGCCCAACCATT+CGG | 0.445190 | 4.3:+4124420 | None:intergenic |
| ATAAATCATAGCGCTTAAAA+GGG | 0.448110 | 4.3:+4126586 | None:intergenic |
| TTCTGAAACAGTCCTGAACT+TGG | 0.449107 | 4.3:+4126160 | None:intergenic |
| GAAGCAGAGTATGGTAGTTA+GGG | 0.453589 | 4.3:+4127794 | None:intergenic |
| TATACATAAAGTGAACATTT+CGG | 0.459139 | 4.3:-4126354 | MS.gene55838:CDS |
| GGCTCAGGGACAAAATCCTC+TGG | 0.464693 | 4.3:+4127928 | None:intergenic |
| ACTTCACGAAATCGCGAACC+AGG | 0.465854 | 4.3:+4127748 | None:intergenic |
| AAGGATACGAGTGGAGTTGA+AGG | 0.466489 | 4.3:+4128171 | None:intergenic |
| CTCGAAAGTCTCAAAACCTC+TGG | 0.471532 | 4.3:-4124643 | MS.gene55838:CDS |
| CTGAAGAAATTGCCATAAGA+TGG | 0.477213 | 4.3:-4124341 | MS.gene55838:CDS |
| TTTCATTGATTGAGGAATAC+GGG | 0.491455 | 4.3:-4127446 | MS.gene55838:CDS |
| TAGGGACTTCCCGAATGGTT+GGG | 0.494523 | 4.3:-4124430 | MS.gene55838:CDS |
| ATAACAACAGAACCAGGAAC+AGG | 0.502133 | 4.3:+4127772 | None:intergenic |
| CTGGAAAGCGTGATCCGTAT+CGG | 0.508838 | 4.3:+4128053 | None:intergenic |
| CTGGTCAAATGGAGTTGTGC+TGG | 0.514815 | 4.3:-4123987 | MS.gene55838:CDS |
| CATTCTTGGAGGAGTTTGGG+TGG | 0.515798 | 4.3:-4123964 | MS.gene55838:CDS |
| TGCGGAGAATTTGGAGGTGG+GGG | 0.515962 | 4.3:-4124252 | MS.gene55838:CDS |
| TTGAAGGCCTTGTAAAATCA+GGG | 0.517177 | 4.3:-4124386 | MS.gene55838:CDS |
| TCGTGCTCTTTCAGTAGTGC+AGG | 0.522605 | 4.3:+4126515 | None:intergenic |
| CAGCAGCTGATGCTAGTTCA+CGG | 0.526218 | 4.3:+4126123 | None:intergenic |
| CAACTCCAGCAGCACGAAGC+AGG | 0.532599 | 4.3:+4124620 | None:intergenic |
| GACAATGTTGTGAAGTTAGG+AGG | 0.536747 | 4.3:+4125876 | None:intergenic |
| CACACCGCATTCAACACATT+CGG | 0.536936 | 4.3:-4128132 | MS.gene55838:CDS |
| ATAGGGACTTCCCGAATGGT+TGG | 0.537673 | 4.3:-4124431 | MS.gene55838:intron |
| AATTGCCTCCTTTCTAACAT+CGG | 0.541772 | 4.3:+4125647 | None:intergenic |
| TTTAAATGCATTTCTACTTG+GGG | 0.544167 | 4.3:-4125829 | MS.gene55838:intron |
| AGCAGCACGAAGCAGGCCAG+AGG | 0.544937 | 4.3:+4124627 | None:intergenic |
| TCAACTAACATGTGTTGAAG+TGG | 0.545752 | 4.3:+4124405 | None:intergenic |
| CATCAGCTGCTGAATCAGGA+TGG | 0.547532 | 4.3:-4126112 | MS.gene55838:CDS |
| ATTTCGTGAAGTATATTACT+GGG | 0.547731 | 4.3:-4127737 | MS.gene55838:CDS |
| CATTGCGGAGAATTTGGAGG+TGG | 0.549996 | 4.3:-4124255 | MS.gene55838:CDS |
| AGGCCTTGTAAAATCAGGGT+TGG | 0.550849 | 4.3:-4124382 | MS.gene55838:CDS |
| TAGCGCTTAAAAGGGGAGGC+TGG | 0.552660 | 4.3:+4126594 | None:intergenic |
| TAGAAAGGAGGCAATTAACT+CGG | 0.554148 | 4.3:-4125640 | MS.gene55838:CDS |
| TCGCCCATGCTCTGACCTCA+GGG | 0.556142 | 4.3:+4127878 | None:intergenic |
| ACAATGTTGTGAAGTTAGGA+GGG | 0.558386 | 4.3:+4125877 | None:intergenic |
| AGTTGTGCTGGCATTCTTGG+AGG | 0.560594 | 4.3:-4123975 | MS.gene55838:CDS |
| GTGTTGGAGAATTTCGAGAA+AGG | 0.563419 | 4.3:+4128152 | None:intergenic |
| CCAGGGATAACAACAGAACC+AGG | 0.567138 | 4.3:+4127766 | None:intergenic |
| GTGAACATTTCGGATGCTCA+AGG | 0.569724 | 4.3:-4126344 | MS.gene55838:CDS |
| GAACATTGCGGAGAATTTGG+AGG | 0.573813 | 4.3:-4124258 | MS.gene55838:CDS |
| GATGGGATTTCAGCACAAGA+TGG | 0.574741 | 4.3:-4126094 | MS.gene55838:CDS |
| TGAGCCAGGAATCAAGCCAT+TGG | 0.576256 | 4.3:+4125595 | None:intergenic |
| ATGTGTGGTATTGCTGAGCC+AGG | 0.578031 | 4.3:+4125581 | None:intergenic |
| ATATTACTGGGATTCCTACT+GGG | 0.578376 | 4.3:-4127725 | MS.gene55838:CDS |
| TGCAATAGGGACTTCCCGAA+TGG | 0.582422 | 4.3:-4124435 | MS.gene55838:intron |
| ACGCTAAGCAGCAATGGCCA+AGG | 0.586201 | 4.3:-4128268 | None:intergenic |
| AAGCGTGATCCGTATCGGAA+AGG | 0.588837 | 4.3:+4128058 | None:intergenic |
| GCGTGATCCGTATCGGAAAG+GGG | 0.591271 | 4.3:+4128060 | None:intergenic |
| ATCAGCTGCTGAATCAGGAT+GGG | 0.594438 | 4.3:-4126111 | MS.gene55838:CDS |
| AAACCCTGAGGTCAGAGCAT+GGG | 0.598300 | 4.3:-4127881 | MS.gene55838:CDS |
| AATCTTCCTAAATCCTCGAC+TGG | 0.599150 | 4.3:-4128030 | MS.gene55838:CDS |
| CCTTAAATCGCTATTATGCA+AGG | 0.603776 | 4.3:-4126310 | MS.gene55838:CDS |
| AAAACCCTGAGGTCAGAGCA+TGG | 0.605362 | 4.3:-4127882 | MS.gene55838:CDS |
| AACGGACACTGAACCAGTCG+AGG | 0.607852 | 4.3:+4128017 | None:intergenic |
| ATTGCGGAGAATTTGGAGGT+GGG | 0.609969 | 4.3:-4124254 | MS.gene55838:CDS |
| TATGAGATATACGCTAGGAC+TGG | 0.610537 | 4.3:-4126566 | MS.gene55838:CDS |
| GGAATGCAAACATGAACCAA+TGG | 0.611077 | 4.3:-4125611 | MS.gene55838:CDS |
| GTTGGAAGAAGCAAGGTCGT+TGG | 0.612218 | 4.3:-4124364 | MS.gene55838:CDS |
| AAAACGATTCAAATCATGAA+CGG | 0.617469 | 4.3:+4127999 | None:intergenic |
| ATCATAGCGCTTAAAAGGGG+AGG | 0.618174 | 4.3:+4126590 | None:intergenic |
| AATTTCCGATGTTAGAAAGG+AGG | 0.620169 | 4.3:-4125652 | MS.gene55838:CDS |
| TTGCGGAGAATTTGGAGGTG+GGG | 0.625168 | 4.3:-4124253 | MS.gene55838:CDS |
| ATGTGTTGAATGCGGTGTGT+TGG | 0.625546 | 4.3:+4128136 | None:intergenic |
| ATTTCAGCACAAGATGGATG+AGG | 0.627854 | 4.3:-4126088 | MS.gene55838:intron |
| TTTGAGAGGTAAATCGACGT+AGG | 0.628012 | 4.3:+4128086 | None:intergenic |
| ATGCAAGGTGGGACAAACCA+AGG | 0.631432 | 4.3:-4126295 | MS.gene55838:CDS |
| TGATTTATGAGATATACGCT+AGG | 0.633128 | 4.3:-4126571 | MS.gene55838:CDS |
| ATTTCGAGAAAGGATACGAG+TGG | 0.636358 | 4.3:+4128162 | None:intergenic |
| ACATACCACACACACCATTG+TGG | 0.636727 | 4.3:+4126262 | None:intergenic |
| AAATCGCTATTATGCAAGGT+GGG | 0.639450 | 4.3:-4126306 | MS.gene55838:CDS |
| CTTCACGAAATCGCGAACCA+GGG | 0.640218 | 4.3:+4127749 | None:intergenic |
| TAAATCGCTATTATGCAAGG+TGG | 0.642260 | 4.3:-4126307 | MS.gene55838:CDS |
| TAAATCATAGCGCTTAAAAG+GGG | 0.643981 | 4.3:+4126587 | None:intergenic |
| GTGATATAGAATTAGTTACA+AGG | 0.645351 | 4.3:-4126544 | MS.gene55838:CDS |
| AAGTTTGACGTGGAACATTG+CGG | 0.648225 | 4.3:-4124270 | MS.gene55838:CDS |
| TAAAATGGCTTCATCCACAA+AGG | 0.649607 | 4.3:+4125412 | None:intergenic |
| AACAAACCTAATTACCCAGT+AGG | 0.651976 | 4.3:+4127711 | None:intergenic |
| TGAGTGATTCAGGACAGCAG+TGG | 0.659605 | 4.3:-4124588 | MS.gene55838:intron |
| AGTTGATGCTGTCACTGTAA+CGG | 0.661317 | 4.3:+4128212 | None:intergenic |
| AATCAGGGTTGGAAGAAGCA+AGG | 0.661754 | 4.3:-4124371 | MS.gene55838:CDS |
| ACTTGAAAATACCTCATGTG+TGG | 0.670842 | 4.3:+4125566 | None:intergenic |
| CGTGATCCGTATCGGAAAGG+GGG | 0.673238 | 4.3:+4128061 | None:intergenic |
| TCTCGTGTACTCTGATCCAG+AGG | 0.686829 | 4.3:-4127944 | MS.gene55838:CDS |
| AAGGCCAGAATCGTCCACAA+TGG | 0.691379 | 4.3:-4126276 | MS.gene55838:intron |
| GCTCAGCAATACCACACATG+AGG | 0.698303 | 4.3:-4125577 | MS.gene55838:intron |
| GAGCATACTACACTAACAGG+AGG | 0.711397 | 4.3:-4127404 | MS.gene55838:intron |
| AATGCATGAAAAGTTTGACG+TGG | 0.715752 | 4.3:-4124280 | MS.gene55838:CDS |
| AGGGTGAGTCTTGACCTCAG+TGG | 0.753249 | 4.3:+4127813 | None:intergenic |
| ATTGCCGAATGTGTTGAATG+CGG | 0.761724 | 4.3:+4128128 | None:intergenic |
| GAGTAGGAAAGTATCCACTG+AGG | 0.796738 | 4.3:-4127827 | MS.gene55838:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACAAAACAAATTCAAAA+AGG | + | chr4.3:4125259-4125278 | None:intergenic | 15.0% |
| !! | AATATTTAATGTTCAACTTT+GGG | - | chr4.3:4125977-4125996 | MS.gene55838:intron | 15.0% |
| !! | AGATATATTGAAAATATACT+AGG | + | chr4.3:4128091-4128110 | None:intergenic | 15.0% |
| !! | ATATTATTTCATTTATACCT+CGG | + | chr4.3:4125962-4125981 | None:intergenic | 15.0% |
| !! | TAATATTTAATGTTCAACTT+TGG | - | chr4.3:4125976-4125995 | MS.gene55838:intron | 15.0% |
| !!! | GTCATTTATTGATTTATAAT+AGG | - | chr4.3:4127269-4127288 | MS.gene55838:intron | 15.0% |
| !!! | TTTATAGAAACTTATTTTGA+TGG | - | chr4.3:4124213-4124232 | MS.gene55838:intron | 15.0% |
| !!! | TTTATTGATTTATAATAGGA+AGG | - | chr4.3:4127273-4127292 | MS.gene55838:intron | 15.0% |
| !!! | TTTTTTGTAAACGATATAAT+TGG | + | chr4.3:4127884-4127903 | None:intergenic | 15.0% |
| !! | AAAAAAAATAAGTGCAGAAA+AGG | + | chr4.3:4125365-4125384 | None:intergenic | 20.0% |
| !! | AGTATTCAACTTTAAACATT+TGG | - | chr4.3:4127040-4127059 | MS.gene55838:intron | 20.0% |
| !! | ATAGAATGCTAAATAATTTG+AGG | - | chr4.3:4127063-4127082 | MS.gene55838:intron | 20.0% |
| !! | ATATTAAGCATATAGACTTA+AGG | + | chr4.3:4127115-4127134 | None:intergenic | 20.0% |
| !! | ATCAGTTAAAATTAAAATGC+TGG | + | chr4.3:4124863-4124882 | None:intergenic | 20.0% |
| !! | ATTTAAATGCATTTCTACTT+GGG | - | chr4.3:4126362-4126381 | MS.gene55838:intron | 20.0% |
| !! | ATTTAGATGACTCATATATA+AGG | + | chr4.3:4126135-4126154 | None:intergenic | 20.0% |
| !! | GATATGTTAAAAAGAATTTC+AGG | - | chr4.3:4127463-4127482 | MS.gene55838:CDS | 20.0% |
| !! | TAAAATGTATGAAAAATCCT+TGG | + | chr4.3:4123944-4123963 | None:intergenic | 20.0% |
| !! | TATACATAAAGTGAACATTT+CGG | - | chr4.3:4125838-4125857 | MS.gene55838:CDS | 20.0% |
| !! | TATATCGTTTACAAAAAAAC+AGG | - | chr4.3:4127886-4127905 | MS.gene55838:CDS | 20.0% |
| !! | TCAGTTAAAATTAAAATGCT+GGG | + | chr4.3:4124862-4124881 | None:intergenic | 20.0% |
| !!! | AACTTTTTTCTACATATGTA+GGG | - | chr4.3:4127668-4127687 | MS.gene55838:intron | 20.0% |
| !!! | ATAATTAGTTTGATTGCAAA+AGG | + | chr4.3:4125500-4125519 | None:intergenic | 20.0% |
| !!! | ATCATTTCTGTTTTTATCTT+TGG | - | chr4.3:4124660-4124679 | MS.gene55838:CDS | 20.0% |
| !!! | TACTTTATCATTGTGATTTT+TGG | - | chr4.3:4128002-4128021 | MS.gene55838:CDS | 20.0% |
| !!! | TTCTGTTATTTGAACAAATA+AGG | - | chr4.3:4124526-4124545 | MS.gene55838:intron | 20.0% |
| ! | AAAACGATTCAAATCATGAA+CGG | + | chr4.3:4124196-4124215 | None:intergenic | 25.0% |
| ! | AAAGGTAAAACAATGAACAT+GGG | + | chr4.3:4125804-4125823 | None:intergenic | 25.0% |
| ! | AAATTACAGAAAGTAATAGC+AGG | + | chr4.3:4124817-4124836 | None:intergenic | 25.0% |
| ! | AAGATAAAGTCATTGTGTAA+AGG | + | chr4.3:4127436-4127455 | None:intergenic | 25.0% |
| ! | AATAAACTCACAAGTGATAT+AGG | + | chr4.3:4125737-4125756 | None:intergenic | 25.0% |
| ! | AATCAATAATAAGTCATGGA+TGG | + | chr4.3:4127002-4127021 | None:intergenic | 25.0% |
| ! | AATTACAGAAAGTAATAGCA+GGG | + | chr4.3:4124816-4124835 | None:intergenic | 25.0% |
| ! | ACAACCAATATTAGAAACTT+GGG | + | chr4.3:4124634-4124653 | None:intergenic | 25.0% |
| ! | ACTTGTATAAATCTACCATA+TGG | - | chr4.3:4126652-4126671 | MS.gene55838:intron | 25.0% |
| ! | ACTTGTGAGTTTATTATCTA+AGG | - | chr4.3:4125742-4125761 | MS.gene55838:intron | 25.0% |
| ! | AGAAATGCATTTAAATCAAC+AGG | + | chr4.3:4126358-4126377 | None:intergenic | 25.0% |
| ! | AGTTAAAATTAAAATGCTGG+GGG | + | chr4.3:4124860-4124879 | None:intergenic | 25.0% |
| ! | ATAAATCATAGCGCTTAAAA+GGG | + | chr4.3:4125609-4125628 | None:intergenic | 25.0% |
| ! | ATAGTTAACACAGTTCAAAT+AGG | + | chr4.3:4124597-4124616 | None:intergenic | 25.0% |
| ! | ATGCATATCTATGGAAAATT+AGG | - | chr4.3:4126937-4126956 | MS.gene55838:intron | 25.0% |
| ! | ATGTAATCGATATATGTTTG+TGG | + | chr4.3:4127400-4127419 | None:intergenic | 25.0% |
| ! | ATTTCGTGAAGTATATTACT+GGG | - | chr4.3:4124455-4124474 | MS.gene55838:intron | 25.0% |
| ! | CAGTTAAAATTAAAATGCTG+GGG | + | chr4.3:4124861-4124880 | None:intergenic | 25.0% |
| ! | CATCTAAATGTGTGTTTATT+AGG | - | chr4.3:4126146-4126165 | MS.gene55838:CDS | 25.0% |
| ! | CTTGTATAAATCTACCATAT+GGG | - | chr4.3:4126653-4126672 | MS.gene55838:intron | 25.0% |
| ! | GATTTAAATGCATTTCTACT+TGG | - | chr4.3:4126361-4126380 | MS.gene55838:intron | 25.0% |
| ! | GTGATATAGAATTAGTTACA+AGG | - | chr4.3:4125648-4125667 | MS.gene55838:CDS | 25.0% |
| ! | GTTATATGATCTCAAATCAA+AGG | + | chr4.3:4125106-4125125 | None:intergenic | 25.0% |
| ! | TAACTGTGTTAATAAACTTC+AGG | + | chr4.3:4126905-4126924 | None:intergenic | 25.0% |
| ! | TACAACCAATATTAGAAACT+TGG | + | chr4.3:4124635-4124654 | None:intergenic | 25.0% |
| ! | TATATCTATAAGACGATGAA+AGG | + | chr4.3:4125822-4125841 | None:intergenic | 25.0% |
| ! | TCACAATCAATAATAAGTCA+TGG | + | chr4.3:4127006-4127025 | None:intergenic | 25.0% |
| ! | TTGTATAAATCTACCATATG+GGG | - | chr4.3:4126654-4126673 | MS.gene55838:intron | 25.0% |
| ! | TTTAAATGCATTTCTACTTG+GGG | - | chr4.3:4126363-4126382 | MS.gene55838:intron | 25.0% |
| !! | ACGTGTATTCTTATTTCAAA+GGG | - | chr4.3:4128114-4128133 | MS.gene55838:CDS | 25.0% |
| !! | AGTAATAAGCAATTTGGAAT+TGG | - | chr4.3:4127629-4127648 | MS.gene55838:intron | 25.0% |
| !! | ATTTCATTGATTGAGGAATA+CGG | - | chr4.3:4124745-4124764 | MS.gene55838:intron | 25.0% |
| !! | GTAATTTTATCCATTGTCAT+TGG | - | chr4.3:4124830-4124849 | MS.gene55838:intron | 25.0% |
| !! | GTTCATGATTTTCTATTCAA+CGG | - | chr4.3:4127219-4127238 | MS.gene55838:intron | 25.0% |
| !! | TACGTGTATTCTTATTTCAA+AGG | - | chr4.3:4128113-4128132 | MS.gene55838:CDS | 25.0% |
| !! | TATACATGTTTTCTAGATGT+TGG | - | chr4.3:4127172-4127191 | MS.gene55838:intron | 25.0% |
| !! | TCAAAGGTGTAGATTATTTA+AGG | + | chr4.3:4125090-4125109 | None:intergenic | 25.0% |
| !! | TGTTTGAAAGTGCAAAAATT+AGG | + | chr4.3:4125543-4125562 | None:intergenic | 25.0% |
| !!! | AAGCAAATACATTTTGATTC+TGG | + | chr4.3:4126749-4126768 | None:intergenic | 25.0% |
| !!! | ACTATTTTGAGAGTTATTCA+CGG | + | chr4.3:4125177-4125196 | None:intergenic | 25.0% |
| !!! | GAACTTTTTTCTACATATGT+AGG | - | chr4.3:4127667-4127686 | MS.gene55838:intron | 25.0% |
| !!! | GTTTTTATCTTTGGTTTTCA+GGG | - | chr4.3:4124669-4124688 | MS.gene55838:CDS | 25.0% |
| !!! | TGTTTTTATCTTTGGTTTTC+AGG | - | chr4.3:4124668-4124687 | MS.gene55838:CDS | 25.0% |
| !!! | TTTTTATCTTTGGTTTTCAG+GGG | - | chr4.3:4124670-4124689 | MS.gene55838:intron | 25.0% |
| AACTGATACTAGAGTTAATG+TGG | + | chr4.3:4126829-4126848 | None:intergenic | 30.0% | |
| ACAAATCGATCTCAAATGAA+TGG | + | chr4.3:4125048-4125067 | None:intergenic | 30.0% | |
| ACTCATATGAAACTTGCAAT+AGG | - | chr4.3:4127743-4127762 | MS.gene55838:CDS | 30.0% | |
| AGAATAAGATACTGCTAATG+TGG | - | chr4.3:4124938-4124957 | MS.gene55838:intron | 30.0% | |
| CAAATGTTACTGGAGATAAT+AGG | - | chr4.3:4126497-4126516 | MS.gene55838:intron | 30.0% | |
| CAGAAACAAAAGAGTAAGAA+AGG | + | chr4.3:4124511-4124530 | None:intergenic | 30.0% | |
| CATAAATCATAGCGCTTAAA+AGG | + | chr4.3:4125610-4125629 | None:intergenic | 30.0% | |
| CTATGGAAAATTAGGAACTT+AGG | - | chr4.3:4126945-4126964 | MS.gene55838:intron | 30.0% | |
| CTCAATCAATGAAATGAGAT+TGG | + | chr4.3:4124740-4124759 | None:intergenic | 30.0% | |
| CTCATATGAAACTTGCAATA+GGG | - | chr4.3:4127744-4127763 | MS.gene55838:CDS | 30.0% | |
| GAAAGGTAAAACAATGAACA+TGG | + | chr4.3:4125805-4125824 | None:intergenic | 30.0% | |
| GATCAAAGAATTTAATGAGC+AGG | + | chr4.3:4126439-4126458 | None:intergenic | 30.0% | |
| GATTTCGTGAAGTATATTAC+TGG | - | chr4.3:4124454-4124473 | MS.gene55838:intron | 30.0% | |
| GTGGTAAGTAATAAGCAATT+TGG | - | chr4.3:4127623-4127642 | MS.gene55838:intron | 30.0% | |
| TAAATCATAGCGCTTAAAAG+GGG | + | chr4.3:4125608-4125627 | None:intergenic | 30.0% | |
| TATCAGTTAAATTGAGTGCA+TGG | - | chr4.3:4126841-4126860 | MS.gene55838:intron | 30.0% | |
| TCATGAATACCTGAGTAAAA+TGG | + | chr4.3:4126798-4126817 | None:intergenic | 30.0% | |
| TGATTTATGAGATATACGCT+AGG | - | chr4.3:4125621-4125640 | MS.gene55838:CDS | 30.0% | |
| TTTCTGTTAAATGCACATGA+AGG | - | chr4.3:4127298-4127317 | MS.gene55838:intron | 30.0% | |
| ! | AATAAGCAATTTGGAATTGG+TGG | - | chr4.3:4127632-4127651 | MS.gene55838:intron | 30.0% |
| ! | ATTTGTTAACACAGAGAATC+TGG | + | chr4.3:4124994-4125013 | None:intergenic | 30.0% |
| ! | CAATCTCATTTCATTGATTG+AGG | - | chr4.3:4124738-4124757 | MS.gene55838:intron | 30.0% |
| ! | CATTCTATTTTACGATCTTC+GGG | + | chr4.3:4128254-4128273 | None:intergenic | 30.0% |
| ! | GCATTCTATTTTACGATCTT+CGG | + | chr4.3:4128255-4128274 | None:intergenic | 30.0% |
| ! | GTGAGTTTATTATCTAAGGT+TGG | - | chr4.3:4125746-4125765 | MS.gene55838:intron | 30.0% |
| ! | TTATTGATTGTGATCGTCTT+CGG | - | chr4.3:4127013-4127032 | MS.gene55838:intron | 30.0% |
| ! | TTTCATTGATTGAGGAATAC+GGG | - | chr4.3:4124746-4124765 | MS.gene55838:intron | 30.0% |
| ! | TTTGAGTACCTTTTATAGCT+AGG | - | chr4.3:4125295-4125314 | MS.gene55838:intron | 30.0% |
| !! | GGTTGCAGAATACTTATTTT+AGG | + | chr4.3:4126418-4126437 | None:intergenic | 30.0% |
| !! | TTGATCATCATTGATTCAGA+TGG | - | chr4.3:4126453-4126472 | MS.gene55838:intron | 30.0% |
| !!! | TTTTATCTTTGGTTTTCAGG+GGG | - | chr4.3:4124671-4124690 | MS.gene55838:intron | 30.0% |
| AAATCGCTATTATGCAAGGT+GGG | - | chr4.3:4125886-4125905 | MS.gene55838:intron | 35.0% | |
| AACAAACCTAATTACCCAGT+AGG | + | chr4.3:4124484-4124503 | None:intergenic | 35.0% | |
| AATGCATGAAAAGTTTGACG+TGG | - | chr4.3:4127912-4127931 | MS.gene55838:CDS | 35.0% | |
| AATTGCCTCCTTTCTAACAT+CGG | + | chr4.3:4126548-4126567 | None:intergenic | 35.0% | |
| AATTTCCGATGTTAGAAAGG+AGG | - | chr4.3:4126540-4126559 | MS.gene55838:CDS | 35.0% | |
| ACAATGTTGTGAAGTTAGGA+GGG | + | chr4.3:4126318-4126337 | None:intergenic | 35.0% | |
| ACACCAATCCTAGCTATAAA+AGG | + | chr4.3:4125306-4125325 | None:intergenic | 35.0% | |
| ACTTGAAAATACCTCATGTG+TGG | + | chr4.3:4126629-4126648 | None:intergenic | 35.0% | |
| ATACACAAAAGTCACATCCT+AGG | + | chr4.3:4128049-4128068 | None:intergenic | 35.0% | |
| ATAGTCACAATGTCATACCT+GGG | + | chr4.3:4127977-4127996 | None:intergenic | 35.0% | |
| ATATTACTGGGATTCCTACT+GGG | - | chr4.3:4124467-4124486 | MS.gene55838:intron | 35.0% | |
| ATTGGTTGTGATCCATCTTA+TGG | + | chr4.3:4127866-4127885 | None:intergenic | 35.0% | |
| CAAGTGCCAAAATTAATCAC+AGG | + | chr4.3:4124558-4124577 | None:intergenic | 35.0% | |
| CATCCACAAAGGAACAAAAT+TGG | + | chr4.3:4126772-4126791 | None:intergenic | 35.0% | |
| CCTTAAATCGCTATTATGCA+AGG | - | chr4.3:4125882-4125901 | MS.gene55838:CDS | 35.0% | |
| CCTTGCATAATAGCGATTTA+AGG | + | chr4.3:4125885-4125904 | None:intergenic | 35.0% | |
| CGATTAAGGTTCATTCTCTT+TGG | - | chr4.3:4124334-4124353 | MS.gene55838:CDS | 35.0% | |
| CTGAAGAAATTGCCATAAGA+TGG | - | chr4.3:4127851-4127870 | MS.gene55838:CDS | 35.0% | |
| CTTCAACACATGTTAGTTGA+AGG | - | chr4.3:4127790-4127809 | MS.gene55838:CDS | 35.0% | |
| CTTGAATATACACACCTCTT+AGG | - | chr4.3:4125775-4125794 | MS.gene55838:intron | 35.0% | |
| GATATGATCACGGTAAAACA+AGG | + | chr4.3:4125463-4125482 | None:intergenic | 35.0% | |
| GCAAATTTCCGATGTTAGAA+AGG | - | chr4.3:4126537-4126556 | MS.gene55838:CDS | 35.0% | |
| GTAGACAATGTTGTGAAGTT+AGG | + | chr4.3:4126322-4126341 | None:intergenic | 35.0% | |
| GTGCAGTATAGATATGATCA+CGG | + | chr4.3:4125473-4125492 | None:intergenic | 35.0% | |
| TAAAATGGCTTCATCCACAA+AGG | + | chr4.3:4126783-4126802 | None:intergenic | 35.0% | |
| TAAATCGCTATTATGCAAGG+TGG | - | chr4.3:4125885-4125904 | MS.gene55838:intron | 35.0% | |
| TACAATCAGTCAGATTCATG+TGG | + | chr4.3:4128163-4128182 | None:intergenic | 35.0% | |
| TAGAAAGGAGGCAATTAACT+CGG | - | chr4.3:4126552-4126571 | MS.gene55838:CDS | 35.0% | |
| TAGATATGCATGCACATTCA+AGG | + | chr4.3:4126928-4126947 | None:intergenic | 35.0% | |
| TATATTACTGGGATTCCTAC+TGG | - | chr4.3:4124466-4124485 | MS.gene55838:intron | 35.0% | |
| TCAACTAACATGTGTTGAAG+TGG | + | chr4.3:4127790-4127809 | None:intergenic | 35.0% | |
| TCCAGTAACATTTGCAAAGA+AGG | + | chr4.3:4126491-4126510 | None:intergenic | 35.0% | |
| TGAAAAAGACAGTTAGCAGA+AGG | + | chr4.3:4126691-4126710 | None:intergenic | 35.0% | |
| TGAATGTGCATGCATATCTA+TGG | - | chr4.3:4126928-4126947 | MS.gene55838:intron | 35.0% | |
| TTCTAACATCGGAAATTTGC+AGG | + | chr4.3:4126537-4126556 | None:intergenic | 35.0% | |
| TTGAGAGTTATTCACGGATT+TGG | + | chr4.3:4125171-4125190 | None:intergenic | 35.0% | |
| ! | AGTGATATAGGCACACATTT+TGG | + | chr4.3:4125725-4125744 | None:intergenic | 35.0% |
| ! | CAGTTAGACTAGTCATTTGA+TGG | + | chr4.3:4125218-4125237 | None:intergenic | 35.0% |
| ! | CTCTTTGGAAAAACTTGAGT+AGG | - | chr4.3:4124349-4124368 | MS.gene55838:CDS | 35.0% |
| ! | CTTCCAATTTTGTTCCTTTG+TGG | - | chr4.3:4126766-4126785 | MS.gene55838:intron | 35.0% |
| ! | GTACCTTTTATAGCTAGGAT+TGG | - | chr4.3:4125300-4125319 | MS.gene55838:intron | 35.0% |
| ! | TCCATGCCTGTGATTAATTT+TGG | - | chr4.3:4124549-4124568 | MS.gene55838:intron | 35.0% |
| ! | TGACTTTTGTGTATGATGAC+TGG | - | chr4.3:4128055-4128074 | MS.gene55838:CDS | 35.0% |
| ! | TTAGGTCATCTTTTACTCCA+TGG | + | chr4.3:4126400-4126419 | None:intergenic | 35.0% |
| ! | TTGAAGGCCTTGTAAAATCA+GGG | - | chr4.3:4127806-4127825 | MS.gene55838:CDS | 35.0% |
| !! | GTCTTTTTCATACTTCCAGA+AGG | - | chr4.3:4126701-4126720 | MS.gene55838:intron | 35.0% |
| !!! | ACCTCAGGGTTTTTTACTTT+AGG | + | chr4.3:4124303-4124322 | None:intergenic | 35.0% |
| !!! | ATACATTTTGATTCTGGTGC+AGG | + | chr4.3:4126743-4126762 | None:intergenic | 35.0% |
| !!! | ATCATTGTGATTTTTGGTCC+AGG | - | chr4.3:4128008-4128027 | MS.gene55838:CDS | 35.0% |
| !!! | GAAACTTATTTTGATGGTGC+AGG | - | chr4.3:4124219-4124238 | MS.gene55838:intron | 35.0% |
| !!! | TACATTTTGATTCTGGTGCA+GGG | + | chr4.3:4126742-4126761 | None:intergenic | 35.0% |
| !!! | TCATTGTGATTTTTGGTCCA+GGG | - | chr4.3:4128009-4128028 | MS.gene55838:CDS | 35.0% |
| AATCTTCCTAAATCCTCGAC+TGG | - | chr4.3:4124162-4124181 | MS.gene55838:intron | 40.0% | |
| AATGTGGAATCAATGTGCTG+TGG | - | chr4.3:4124954-4124973 | MS.gene55838:intron | 40.0% | |
| ACATATGTAGGGAGCAGAAA+AGG | - | chr4.3:4127679-4127698 | MS.gene55838:intron | 40.0% | |
| ACCAATCAACAGCGTAATCT+AGG | + | chr4.3:4127153-4127172 | None:intergenic | 40.0% | |
| ACTTTAGGCAAAAAACCCTC+AGG | + | chr4.3:4124288-4124307 | None:intergenic | 40.0% | |
| AGGTTTCTCATATGTTTCCC+TGG | + | chr4.3:4128029-4128048 | None:intergenic | 40.0% | |
| ATAACAACAGAACCAGGAAC+AGG | + | chr4.3:4124423-4124442 | None:intergenic | 40.0% | |
| ATCAACAGCGTAATCTAGGA+CGG | + | chr4.3:4127149-4127168 | None:intergenic | 40.0% | |
| ATCAGTCAGATTCATGTGGA+AGG | + | chr4.3:4128159-4128178 | None:intergenic | 40.0% | |
| ATGTGCTGTGGTGTGAAATA+CGG | - | chr4.3:4124966-4124985 | MS.gene55838:intron | 40.0% | |
| ATTGCCGAATGTGTTGAATG+CGG | + | chr4.3:4124067-4124086 | None:intergenic | 40.0% | |
| ATTTCAGCACAAGATGGATG+AGG | - | chr4.3:4126104-4126123 | MS.gene55838:CDS | 40.0% | |
| ATTTCGAGAAAGGATACGAG+TGG | + | chr4.3:4124033-4124052 | None:intergenic | 40.0% | |
| CAGGTATGACATTGTGACTA+TGG | - | chr4.3:4127976-4127995 | MS.gene55838:CDS | 40.0% | |
| CATAGTCACAATGTCATACC+TGG | + | chr4.3:4127978-4127997 | None:intergenic | 40.0% | |
| CTAGAGCATACTACACTAAC+AGG | - | chr4.3:4124785-4124804 | MS.gene55838:intron | 40.0% | |
| GAAGCAGAGTATGGTAGTTA+GGG | + | chr4.3:4124401-4124420 | None:intergenic | 40.0% | |
| GAATACGGGTTTGTGCTTAA+TGG | - | chr4.3:4124760-4124779 | MS.gene55838:intron | 40.0% | |
| GACAATGTTGTGAAGTTAGG+AGG | + | chr4.3:4126319-4126338 | None:intergenic | 40.0% | |
| GATTCCACGCATTAAATGCA+TGG | + | chr4.3:4125149-4125168 | None:intergenic | 40.0% | |
| GATTGTATTGCAATGCAGAC+TGG | - | chr4.3:4128176-4128195 | MS.gene55838:CDS | 40.0% | |
| GCAACTTCTTTGAGTGATTC+AGG | - | chr4.3:4127594-4127613 | MS.gene55838:intron | 40.0% | |
| GCCAAAATTAATCACAGGCA+TGG | + | chr4.3:4124553-4124572 | None:intergenic | 40.0% | |
| GCCTAAAGTAAAAAACCCTG+AGG | - | chr4.3:4124299-4124318 | MS.gene55838:CDS | 40.0% | |
| GCCTTCTTTGCAAATGTTAC+TGG | - | chr4.3:4126487-4126506 | MS.gene55838:intron | 40.0% | |
| GGAATGCAAACATGAACCAA+TGG | - | chr4.3:4126581-4126600 | MS.gene55838:CDS | 40.0% | |
| GGGAAACATATGAGAAACCT+AGG | - | chr4.3:4128029-4128048 | MS.gene55838:CDS | 40.0% | |
| GTCGCCCAAGTTTCTAATAT+TGG | - | chr4.3:4124627-4124646 | MS.gene55838:CDS | 40.0% | |
| GTGTGGTATGTTAATAACCG+AGG | - | chr4.3:4125942-4125961 | MS.gene55838:intron | 40.0% | |
| GTGTTGGAGAATTTCGAGAA+AGG | + | chr4.3:4124043-4124062 | None:intergenic | 40.0% | |
| TAATTCCATGCCATAGGACA+AGG | - | chr4.3:4126000-4126019 | MS.gene55838:intron | 40.0% | |
| TACAGTGACAGCATCAACTA+TGG | - | chr4.3:4123984-4124003 | MS.gene55838:CDS | 40.0% | |
| TAGTCACAATGTCATACCTG+GGG | + | chr4.3:4127976-4127995 | None:intergenic | 40.0% | |
| TATCCCAAACTTGAACCTTC+TGG | + | chr4.3:4126719-4126738 | None:intergenic | 40.0% | |
| TATGAGATATACGCTAGGAC+TGG | - | chr4.3:4125626-4125645 | MS.gene55838:CDS | 40.0% | |
| TCCTAGATTACGCTGTTGAT+TGG | - | chr4.3:4127149-4127168 | MS.gene55838:intron | 40.0% | |
| TCGAGGATTTAGGAAGATTC+TGG | + | chr4.3:4124161-4124180 | None:intergenic | 40.0% | |
| TTTGAGAGGTAAATCGACGT+AGG | + | chr4.3:4124109-4124128 | None:intergenic | 40.0% | |
| TTTGGGTAATTCCATGCCAT+AGG | - | chr4.3:4125994-4126013 | MS.gene55838:intron | 40.0% | |
| ! | ACTTCCAGAAGGTTCAAGTT+TGG | - | chr4.3:4126712-4126731 | MS.gene55838:intron | 40.0% |
| ! | AGGCAATTAACTCGGTTTTC+TGG | - | chr4.3:4126560-4126579 | MS.gene55838:CDS | 40.0% |
| ! | AGTTGATGCTGTCACTGTAA+CGG | + | chr4.3:4123983-4124002 | None:intergenic | 40.0% |
| ! | CGATATATGTTTGTGGACTG+CGG | + | chr4.3:4127393-4127412 | None:intergenic | 40.0% |
| ! | CTTCCAACCCTGATTTTACA+AGG | + | chr4.3:4127816-4127835 | None:intergenic | 40.0% |
| ! | CTTCCAGAAGGTTCAAGTTT+GGG | - | chr4.3:4126713-4126732 | MS.gene55838:intron | 40.0% |
| ! | CTTTTGTGTATGATGACTGG+AGG | - | chr4.3:4128058-4128077 | MS.gene55838:CDS | 40.0% |
| ! | GGTAAATCGACGTAGGTTTT+AGG | + | chr4.3:4124102-4124121 | None:intergenic | 40.0% |
| ! | GTTGAAGGCCTTGTAAAATC+AGG | - | chr4.3:4127805-4127824 | MS.gene55838:CDS | 40.0% |
| !! | TACTGAAAGAGCACGAGTTT+TGG | - | chr4.3:4125684-4125703 | MS.gene55838:CDS | 40.0% |
| !! | TGGATGAAGCCATTTTACTC+AGG | - | chr4.3:4126786-4126805 | MS.gene55838:intron | 40.0% |
| !! | TTCTGAAACAGTCCTGAACT+TGG | + | chr4.3:4126035-4126054 | None:intergenic | 40.0% |
| !!! | ATTGCAATGCAGACTGGTTT+TGG | - | chr4.3:4128182-4128201 | MS.gene55838:CDS | 40.0% |
| AAGGATACGAGTGGAGTTGA+AGG | + | chr4.3:4124024-4124043 | None:intergenic | 45.0% | |
| AATCAGGGTTGGAAGAAGCA+AGG | - | chr4.3:4127821-4127840 | MS.gene55838:CDS | 45.0% | |
| ACATACCACACACACCATTG+TGG | + | chr4.3:4125933-4125952 | None:intergenic | 45.0% | |
| ACTGAACCAGTCGAGGATTT+AGG | + | chr4.3:4124171-4124190 | None:intergenic | 45.0% | |
| AGGTACTCAAATAAGTCGCG+TGG | + | chr4.3:4125286-4125305 | None:intergenic | 45.0% | |
| ATCAGCTGCTGAATCAGGAT+GGG | - | chr4.3:4126081-4126100 | MS.gene55838:intron | 45.0% | |
| ATCATAGCGCTTAAAAGGGG+AGG | + | chr4.3:4125605-4125624 | None:intergenic | 45.0% | |
| ATGAACATGGGCAACCTAAG+AGG | + | chr4.3:4125792-4125811 | None:intergenic | 45.0% | |
| ATGTGTTGAATGCGGTGTGT+TGG | + | chr4.3:4124059-4124078 | None:intergenic | 45.0% | |
| ATTGCGGAGAATTTGGAGGT+GGG | - | chr4.3:4127938-4127957 | MS.gene55838:CDS | 45.0% | |
| CAAATTCCCCCTTTCCGATA+CGG | - | chr4.3:4124125-4124144 | MS.gene55838:intron | 45.0% | |
| CACACCGCATTCAACACATT+CGG | - | chr4.3:4124060-4124079 | MS.gene55838:intron | 45.0% | |
| CATGGCGTAGCAATTCATCT+TGG | + | chr4.3:4125131-4125150 | None:intergenic | 45.0% | |
| CTCGAAAGTCTCAAAACCTC+TGG | - | chr4.3:4127549-4127568 | MS.gene55838:intron | 45.0% | |
| GAGCATACTACACTAACAGG+AGG | - | chr4.3:4124788-4124807 | MS.gene55838:intron | 45.0% | |
| GATGGGATTTCAGCACAAGA+TGG | - | chr4.3:4126098-4126117 | MS.gene55838:CDS | 45.0% | |
| GGAAGCAGAGTATGGTAGTT+AGG | + | chr4.3:4124402-4124421 | None:intergenic | 45.0% | |
| GGGATTCCTACTGGGTAATT+AGG | - | chr4.3:4124475-4124494 | MS.gene55838:intron | 45.0% | |
| GTGAACATTTCGGATGCTCA+AGG | - | chr4.3:4125848-4125867 | MS.gene55838:CDS | 45.0% | |
| GTGCATTGCTTACACACACT+AGG | + | chr4.3:4126175-4126194 | None:intergenic | 45.0% | |
| TACGCCATGCATTTAATGCG+TGG | - | chr4.3:4125142-4125161 | MS.gene55838:intron | 45.0% | |
| TGAACCAATGGCTTGATTCC+TGG | - | chr4.3:4126593-4126612 | MS.gene55838:CDS | 45.0% | |
| TGGCATTCTTGGAGGAGTTT+GGG | - | chr4.3:4128225-4128244 | MS.gene55838:CDS | 45.0% | |
| ! | AGGCCTTGTAAAATCAGGGT+TGG | - | chr4.3:4127810-4127829 | MS.gene55838:CDS | 45.0% |
| !! | GAGTAGGAAAGTATCCACTG+AGG | - | chr4.3:4124365-4124384 | MS.gene55838:CDS | 45.0% |
| !!! | ACTGGTTTTGGCTGGTCAAA+TGG | - | chr4.3:4128194-4128213 | MS.gene55838:CDS | 45.0% |
| !!! | GAGCACGAGTTTTGGAATTC+AGG | - | chr4.3:4125692-4125711 | MS.gene55838:CDS | 45.0% |
| !!! | TTTGGTTTTCAGGGGGTTGT+TGG | - | chr4.3:4124678-4124697 | MS.gene55838:intron | 45.0% |
| AAAACCCTGAGGTCAGAGCA+TGG | - | chr4.3:4124310-4124329 | MS.gene55838:CDS | 50.0% | |
| AAACCCTGAGGTCAGAGCAT+GGG | - | chr4.3:4124311-4124330 | MS.gene55838:CDS | 50.0% | |
| AAGCGTGATCCGTATCGGAA+AGG | + | chr4.3:4124137-4124156 | None:intergenic | 50.0% | |
| AAGGCCAGAATCGTCCACAA+TGG | - | chr4.3:4125916-4125935 | MS.gene55838:intron | 50.0% | |
| ACTTCACGAAATCGCGAACC+AGG | + | chr4.3:4124447-4124466 | None:intergenic | 50.0% | |
| AGATGCCTTGTCCTATGGCA+TGG | + | chr4.3:4126008-4126027 | None:intergenic | 50.0% | |
| AGCGTGATCCGTATCGGAAA+GGG | + | chr4.3:4124136-4124155 | None:intergenic | 50.0% | |
| AGGCATCTGCTTCCAAGTTC+AGG | - | chr4.3:4126020-4126039 | MS.gene55838:intron | 50.0% | |
| ATAGGGACTTCCCGAATGGT+TGG | - | chr4.3:4127761-4127780 | MS.gene55838:CDS | 50.0% | |
| ATCGTCCACAATGGTGTGTG+TGG | - | chr4.3:4125925-4125944 | MS.gene55838:intron | 50.0% | |
| ATGCAAGGTGGGACAAACCA+AGG | - | chr4.3:4125897-4125916 | MS.gene55838:intron | 50.0% | |
| ATGTGTGGTATTGCTGAGCC+AGG | + | chr4.3:4126614-4126633 | None:intergenic | 50.0% | |
| ATTGTGGACGATTCTGGCCT+TGG | + | chr4.3:4125917-4125936 | None:intergenic | 50.0% | |
| CACACCATTGTGGACGATTC+TGG | + | chr4.3:4125923-4125942 | None:intergenic | 50.0% | |
| CAGCAGCTGATGCTAGTTCA+CGG | + | chr4.3:4126072-4126091 | None:intergenic | 50.0% | |
| CAGGAACAGGAAGCAGAGTA+TGG | + | chr4.3:4124410-4124429 | None:intergenic | 50.0% | |
| CATACTCTGCTTCCTGTTCC+TGG | - | chr4.3:4124408-4124427 | MS.gene55838:CDS | 50.0% | |
| CATCAGCTGCTGAATCAGGA+TGG | - | chr4.3:4126080-4126099 | MS.gene55838:intron | 50.0% | |
| CATTCTTGGAGGAGTTTGGG+TGG | - | chr4.3:4128228-4128247 | MS.gene55838:CDS | 50.0% | |
| CATTGCGGAGAATTTGGAGG+TGG | - | chr4.3:4127937-4127956 | MS.gene55838:CDS | 50.0% | |
| CCAGGGATAACAACAGAACC+AGG | + | chr4.3:4124429-4124448 | None:intergenic | 50.0% | |
| CTAGCATCAGCTGCTGAATC+AGG | - | chr4.3:4126076-4126095 | MS.gene55838:intron | 50.0% | |
| CTGGCATTCTTGGAGGAGTT+TGG | - | chr4.3:4128224-4128243 | MS.gene55838:CDS | 50.0% | |
| CTGGTCAAATGGAGTTGTGC+TGG | - | chr4.3:4128205-4128224 | MS.gene55838:CDS | 50.0% | |
| CTTCACGAAATCGCGAACCA+GGG | + | chr4.3:4124446-4124465 | None:intergenic | 50.0% | |
| GAAGCAGATGCCTTGTCCTA+TGG | + | chr4.3:4126013-4126032 | None:intergenic | 50.0% | |
| GCAAAAAACCCTCAGGCTCA+GGG | + | chr4.3:4124281-4124300 | None:intergenic | 50.0% | |
| GCTCAGCAATACCACACATG+AGG | - | chr4.3:4126615-4126634 | MS.gene55838:intron | 50.0% | |
| GTTGGAAGAAGCAAGGTCGT+TGG | - | chr4.3:4127828-4127847 | MS.gene55838:CDS | 50.0% | |
| TAGGGACTTCCCGAATGGTT+GGG | - | chr4.3:4127762-4127781 | MS.gene55838:CDS | 50.0% | |
| TCGGAAAGGGGGAATTTGAG+AGG | + | chr4.3:4124123-4124142 | None:intergenic | 50.0% | |
| TCGTGCTCTTTCAGTAGTGC+AGG | + | chr4.3:4125680-4125699 | None:intergenic | 50.0% | |
| TCTCGTGTACTCTGATCCAG+AGG | - | chr4.3:4124248-4124267 | MS.gene55838:CDS | 50.0% | |
| TGAAGTGGAGCCCAACCATT+CGG | + | chr4.3:4127775-4127794 | None:intergenic | 50.0% | |
| TGAGCCAGGAATCAAGCCAT+TGG | + | chr4.3:4126600-4126619 | None:intergenic | 50.0% | |
| TGAGTGATTCAGGACAGCAG+TGG | - | chr4.3:4127604-4127623 | MS.gene55838:intron | 50.0% | |
| TGCAATAGGGACTTCCCGAA+TGG | - | chr4.3:4127757-4127776 | MS.gene55838:CDS | 50.0% | |
| TTGCGGAGAATTTGGAGGTG+GGG | - | chr4.3:4127939-4127958 | MS.gene55838:CDS | 50.0% | |
| TTGGGGTAAGTTGCAGACCA+TGG | - | chr4.3:4126380-4126399 | MS.gene55838:intron | 50.0% | |
| ! | AGTTGTGCTGGCATTCTTGG+AGG | - | chr4.3:4128217-4128236 | MS.gene55838:CDS | 50.0% |
| ! | CTGGAAAGCGTGATCCGTAT+CGG | + | chr4.3:4124142-4124161 | None:intergenic | 50.0% |
| ! | GATTTTGTCCCTGAGCCTGA+GGG | - | chr4.3:4124270-4124289 | MS.gene55838:CDS | 50.0% |
| ! | TGGAGTTGTGCTGGCATTCT+TGG | - | chr4.3:4128214-4128233 | MS.gene55838:CDS | 50.0% |
| !! | CCTGGTTCTGTTGTTATCCC+TGG | - | chr4.3:4124426-4124445 | MS.gene55838:CDS | 50.0% |
| !!! | CAATGCAGACTGGTTTTGGC+TGG | - | chr4.3:4128186-4128205 | MS.gene55838:CDS | 50.0% |
| AACGGACACTGAACCAGTCG+AGG | + | chr4.3:4124178-4124197 | None:intergenic | 55.0% | |
| AGGGTGAGTCTTGACCTCAG+TGG | + | chr4.3:4124382-4124401 | None:intergenic | 55.0% | |
| CGTGATCCGTATCGGAAAGG+GGG | + | chr4.3:4124134-4124153 | None:intergenic | 55.0% | |
| GAAGTGGAGCCCAACCATTC+GGG | + | chr4.3:4127774-4127793 | None:intergenic | 55.0% | |
| GCGTGATCCGTATCGGAAAG+GGG | + | chr4.3:4124135-4124154 | None:intergenic | 55.0% | |
| GGCAAAAAACCCTCAGGCTC+AGG | + | chr4.3:4124282-4124301 | None:intergenic | 55.0% | |
| GGCTAAGACAGCTCCCCATA+TGG | + | chr4.3:4126670-4126689 | None:intergenic | 55.0% | |
| GGCTCAGGGACAAAATCCTC+TGG | + | chr4.3:4124267-4124286 | None:intergenic | 55.0% | |
| GGTCAGAGCATGGGCGATTA+AGG | - | chr4.3:4124320-4124339 | MS.gene55838:CDS | 55.0% | |
| TAGCGCTTAAAAGGGGAGGC+TGG | + | chr4.3:4125601-4125620 | None:intergenic | 55.0% | |
| TGCGGAGAATTTGGAGGTGG+GGG | - | chr4.3:4127940-4127959 | MS.gene55838:CDS | 55.0% | |
| TGGGGGTGAATATGTACCCC+AGG | - | chr4.3:4127957-4127976 | MS.gene55838:CDS | 55.0% | |
| ! | GGATTTTGTCCCTGAGCCTG+AGG | - | chr4.3:4124269-4124288 | MS.gene55838:CDS | 55.0% |
| ! | TGGGGGTGCACCAATGACAA+TGG | + | chr4.3:4124843-4124862 | None:intergenic | 55.0% |
| ! | TGTGGACTGCGGTGCATGTT+TGG | + | chr4.3:4127382-4127401 | None:intergenic | 55.0% |
| ATCGCCCATGCTCTGACCTC+AGG | + | chr4.3:4124318-4124337 | None:intergenic | 60.0% | |
| CAACTCCAGCAGCACGAAGC+AGG | + | chr4.3:4127575-4127594 | None:intergenic | 60.0% | |
| TCGCCCATGCTCTGACCTCA+GGG | + | chr4.3:4124317-4124336 | None:intergenic | 60.0% | |
| AGCAGCACGAAGCAGGCCAG+AGG | + | chr4.3:4127568-4127587 | None:intergenic | 65.0% | |
| TCTGGCCTGCTTCGTGCTGC+TGG | - | chr4.3:4127567-4127586 | MS.gene55838:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 4123937 | 4128277 | 4123937 | ID=MS.gene55838 |
| chr4.3 | mRNA | 4123937 | 4128277 | 4123937 | ID=MS.gene55838.t1;Parent=MS.gene55838 |
| chr4.3 | exon | 4127718 | 4128277 | 4127718 | ID=MS.gene55838.t1.exon1;Parent=MS.gene55838.t1 |
| chr4.3 | CDS | 4127718 | 4128277 | 4127718 | ID=cds.MS.gene55838.t1;Parent=MS.gene55838.t1 |
| chr4.3 | exon | 4127405 | 4127524 | 4127405 | ID=MS.gene55838.t1.exon2;Parent=MS.gene55838.t1 |
| chr4.3 | CDS | 4127405 | 4127524 | 4127405 | ID=cds.MS.gene55838.t1;Parent=MS.gene55838.t1 |
| chr4.3 | exon | 4126501 | 4126616 | 4126501 | ID=MS.gene55838.t1.exon3;Parent=MS.gene55838.t1 |
| chr4.3 | CDS | 4126501 | 4126616 | 4126501 | ID=cds.MS.gene55838.t1;Parent=MS.gene55838.t1 |
| chr4.3 | exon | 4126277 | 4126377 | 4126277 | ID=MS.gene55838.t1.exon4;Parent=MS.gene55838.t1 |
| chr4.3 | CDS | 4126277 | 4126377 | 4126277 | ID=cds.MS.gene55838.t1;Parent=MS.gene55838.t1 |
| chr4.3 | exon | 4126089 | 4126198 | 4126089 | ID=MS.gene55838.t1.exon5;Parent=MS.gene55838.t1 |
| chr4.3 | CDS | 4126089 | 4126198 | 4126089 | ID=cds.MS.gene55838.t1;Parent=MS.gene55838.t1 |
| chr4.3 | exon | 4125830 | 4125902 | 4125830 | ID=MS.gene55838.t1.exon6;Parent=MS.gene55838.t1 |
| chr4.3 | CDS | 4125830 | 4125902 | 4125830 | ID=cds.MS.gene55838.t1;Parent=MS.gene55838.t1 |
| chr4.3 | exon | 4125578 | 4125742 | 4125578 | ID=MS.gene55838.t1.exon7;Parent=MS.gene55838.t1 |
| chr4.3 | CDS | 4125578 | 4125742 | 4125578 | ID=cds.MS.gene55838.t1;Parent=MS.gene55838.t1 |
| chr4.3 | exon | 4125407 | 4125494 | 4125407 | ID=MS.gene55838.t1.exon8;Parent=MS.gene55838.t1 |
| chr4.3 | CDS | 4125407 | 4125494 | 4125407 | ID=cds.MS.gene55838.t1;Parent=MS.gene55838.t1 |
| chr4.3 | exon | 4124589 | 4124688 | 4124589 | ID=MS.gene55838.t1.exon9;Parent=MS.gene55838.t1 |
| chr4.3 | CDS | 4124589 | 4124688 | 4124589 | ID=cds.MS.gene55838.t1;Parent=MS.gene55838.t1 |
| chr4.3 | exon | 4124236 | 4124449 | 4124236 | ID=MS.gene55838.t1.exon10;Parent=MS.gene55838.t1 |
| chr4.3 | CDS | 4124236 | 4124449 | 4124236 | ID=cds.MS.gene55838.t1;Parent=MS.gene55838.t1 |
| chr4.3 | exon | 4123937 | 4124020 | 4123937 | ID=MS.gene55838.t1.exon11;Parent=MS.gene55838.t1 |
| chr4.3 | CDS | 4123937 | 4124020 | 4123937 | ID=cds.MS.gene55838.t1;Parent=MS.gene55838.t1 |
| Gene Sequence |
| Protein sequence |
