AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene030522

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene030522.t1 MTR_8g096050 99.406 505 3 0 1 505 1 505 0.0 1039
MS.gene030522.t1 MTR_3g098460 79.830 471 95 0 35 505 13 483 0.0 800
MS.gene030522.t1 MTR_7g084400 72.464 483 120 3 31 505 11 488 0.0 740
MS.gene030522.t1 MTR_7g084400 69.118 408 119 4 31 434 11 415 0.0 590
MS.gene030522.t1 MTR_7g084400 31.319 182 118 3 321 500 207 383 3.15e-19 90.5
MS.gene030522.t1 MTR_5g009500 38.436 307 162 8 225 505 36 341 1.59e-59 200
MS.gene030522.t1 MTR_8g027975 36.013 311 166 8 225 505 49 356 1.40e-58 198
MS.gene030522.t1 MTR_3g107510 37.410 278 170 2 225 502 120 393 7.84e-54 186
MS.gene030522.t1 MTR_1g012030 38.129 278 168 2 225 502 137 410 1.31e-53 186
MS.gene030522.t1 MTR_4g114320 38.351 279 166 4 225 502 121 394 3.72e-53 184
MS.gene030522.t1 MTR_4g114320 27.304 293 180 9 220 500 24 295 1.12e-20 94.4
MS.gene030522.t1 MTR_3g104600 32.237 304 173 7 227 504 35 331 4.39e-47 167
MS.gene030522.t1 MTR_6g091800 32.051 312 189 6 211 504 2 308 4.84e-45 160
MS.gene030522.t1 MTR_6g091800 33.166 199 120 4 318 505 16 212 2.90e-25 106
MS.gene030522.t1 MTR_7g064980 32.119 302 169 7 227 503 25 315 3.87e-44 158
MS.gene030522.t1 MTR_7g064980 30.693 202 125 4 311 500 15 213 4.27e-23 100
MS.gene030522.t1 MTR_7g064980 27.753 227 150 5 187 406 98 317 2.09e-19 89.4
MS.gene030522.t1 MTR_6g091800 30.240 334 186 7 211 502 2 330 1.42e-42 155
MS.gene030522.t1 MTR_2g436930 30.820 305 171 7 229 496 17 318 7.19e-39 144
MS.gene030522.t1 MTR_2g436930 31.088 193 116 3 323 500 17 207 1.24e-21 96.3
MS.gene030522.t1 MTR_2g436930 26.341 205 127 6 220 401 119 322 2.10e-13 71.6
MS.gene030522.t1 MTR_5g081150 32.423 293 176 7 227 502 34 321 1.30e-36 138
MS.gene030522.t1 MTR_5g081150 33.696 184 112 5 226 402 140 320 1.39e-15 78.2
MS.gene030522.t1 MTR_5g081150 33.000 200 115 6 314 500 27 220 1.63e-15 78.2
MS.gene030522.t1 MTR_6g091800 32.283 254 151 5 211 448 2 250 2.33e-36 136
MS.gene030522.t1 MTR_6g091800 33.166 199 120 4 318 505 16 212 1.96e-25 105
MS.gene030522.t1 MTR_4g119770 29.936 314 178 7 229 503 16 326 4.39e-36 137
MS.gene030522.t1 MTR_4g119770 25.121 207 129 6 219 401 119 323 1.45e-13 72.0
MS.gene030522.t1 MTR_6g091800 29.114 316 177 7 211 484 2 312 5.80e-36 136
MS.gene030522.t1 MTR_6g091800 32.400 250 148 5 211 444 2 246 2.61e-35 133
MS.gene030522.t1 MTR_6g091800 33.166 199 120 4 318 505 16 212 1.89e-25 105
MS.gene030522.t1 MTR_7g109135 32.646 291 171 8 229 502 24 306 2.71e-35 134
MS.gene030522.t1 MTR_6g034145 31.250 256 157 4 263 504 4 254 5.45e-35 132
MS.gene030522.t1 MTR_6g034145 33.784 148 86 3 369 505 12 158 3.20e-19 87.8
MS.gene030522.t1 MTR_6g091800 29.856 278 150 6 211 448 2 274 3.63e-34 130
MS.gene030522.t1 MTR_6g091800 29.596 223 120 4 318 505 16 236 4.31e-22 97.1
MS.gene030522.t1 MTR_6g092210 30.645 248 159 4 263 502 4 246 2.03e-33 127
MS.gene030522.t1 MTR_6g092210 31.690 142 91 2 369 505 12 152 3.39e-16 79.0
MS.gene030522.t1 MTR_7g068340 29.412 272 168 7 238 500 98 354 2.42e-33 130
MS.gene030522.t1 MTR_7g068340 32.749 171 102 3 337 502 103 265 6.82e-20 92.0
MS.gene030522.t1 MTR_7g068340 25.862 174 122 2 229 402 189 355 9.34e-17 82.4
MS.gene030522.t1 MTR_6g091800 29.927 274 147 6 211 444 2 270 3.87e-33 127
MS.gene030522.t1 MTR_6g091800 29.596 223 120 4 318 505 16 236 4.59e-22 96.7
MS.gene030522.t1 MTR_3g074490 33.775 302 172 7 224 505 113 406 4.86e-33 130
MS.gene030522.t1 MTR_3g074490 25.269 186 131 3 316 501 111 288 6.19e-12 67.8
MS.gene030522.t1 MTR_1g087840 31.317 281 168 7 239 502 31 303 1.38e-32 127
MS.gene030522.t1 MTR_8g076760 34.875 281 161 7 243 504 30 307 7.92e-32 124
MS.gene030522.t1 MTR_8g090210 32.039 309 180 10 218 505 101 400 8.53e-32 126
MS.gene030522.t1 MTR_4g005330 29.276 304 169 10 225 499 64 350 2.17e-31 124
MS.gene030522.t1 MTR_4g005330 28.235 170 114 3 237 402 187 352 1.03e-11 67.0
MS.gene030522.t1 MTR_3g104500 26.885 305 199 6 218 504 25 323 1.00e-30 122
MS.gene030522.t1 MTR_4g005330 28.904 301 168 10 228 499 1 284 8.58e-30 118
MS.gene030522.t1 MTR_4g005330 28.235 170 114 3 237 402 121 286 1.94e-11 65.5
MS.gene030522.t1 MTR_7g109135 30.584 291 170 9 229 502 24 299 3.22e-29 117
MS.gene030522.t1 MTR_7g109135 33.191 235 140 6 277 502 2 228 3.64e-29 115
MS.gene030522.t1 MTR_4g016730 31.034 290 159 8 227 500 89 353 6.17e-29 118
MS.gene030522.t1 MTR_1g095780 23.673 452 314 13 57 503 360 785 2.88e-27 116
MS.gene030522.t1 MTR_4g012850 27.798 277 191 5 225 496 14 286 3.51e-27 111
MS.gene030522.t1 MTR_4g012850 28.497 193 122 7 317 502 11 194 9.85e-12 66.2
MS.gene030522.t1 MTR_2g436930 30.870 230 136 6 287 496 2 228 7.74e-27 108
MS.gene030522.t1 MTR_2g436930 26.214 206 128 6 219 401 28 232 6.68e-14 71.6
MS.gene030522.t1 MTR_5g055410 32.740 281 164 9 239 502 33 305 2.09e-26 110
MS.gene030522.t1 MTR_5g055410 28.947 190 114 6 239 413 131 314 3.16e-12 68.6
MS.gene030522.t1 MTR_7g109135 33.645 214 125 6 298 502 2 207 4.31e-26 106
MS.gene030522.t1 MTR_8g107270 27.143 280 184 6 227 490 18 293 4.51e-25 105
MS.gene030522.t1 MTR_6g091910 30.457 197 121 4 318 502 16 208 6.40e-25 102
MS.gene030522.t1 MTR_6g091910 26.316 209 132 6 211 401 2 206 1.60e-15 75.9
MS.gene030522.t1 MTR_4g119770 29.435 248 142 5 229 446 16 260 8.38e-25 103
MS.gene030522.t1 MTR_4g119770 29.048 210 126 4 308 500 5 208 3.18e-21 93.6
MS.gene030522.t1 MTR_3g025800 27.864 323 196 8 214 503 14 332 1.59e-24 105
MS.gene030522.t1 MTR_8g098240 26.644 289 202 4 218 505 311 590 3.40e-22 100
MS.gene030522.t1 MTR_5g073040 29.000 300 187 11 214 499 24 311 1.67e-21 95.9
MS.gene030522.t1 MTR_5g073040 28.962 183 122 2 321 503 39 213 5.93e-20 91.3
MS.gene030522.t1 MTR_5g081150 32.273 220 129 6 227 431 34 248 2.86e-21 93.6
MS.gene030522.t1 MTR_5g081150 33.000 200 115 6 314 500 27 220 4.65e-16 78.6
MS.gene030522.t1 MTR_5g081150 32.273 220 129 6 227 431 34 248 4.77e-21 92.8
MS.gene030522.t1 MTR_5g081150 33.000 200 115 6 314 500 27 220 4.28e-16 78.6
MS.gene030522.t1 MTR_6g034515 28.464 267 170 7 243 499 83 338 6.61e-21 94.7
MS.gene030522.t1 MTR_2g102010 27.915 283 198 3 225 503 15 295 6.75e-21 93.6
MS.gene030522.t1 MTR_1g097890 27.698 278 173 6 228 502 52 304 2.07e-20 92.4
MS.gene030522.t1 MTR_3g028590 28.028 289 170 9 227 490 93 368 2.84e-20 93.2
MS.gene030522.t1 MTR_3g028590 28.028 289 170 9 227 490 97 372 3.04e-20 93.2
MS.gene030522.t1 MTR_8g092080 29.032 279 168 7 228 502 53 305 1.22e-19 90.1
MS.gene030522.t1 MTR_6g091800 33.333 171 101 4 318 477 16 184 2.21e-19 86.3
MS.gene030522.t1 MTR_6g091800 35.971 139 84 3 211 345 2 139 7.41e-19 85.1
MS.gene030522.t1 MTR_6g091800 35.971 139 84 3 211 345 2 139 9.39e-19 85.1
MS.gene030522.t1 MTR_6g091800 29.231 195 101 4 318 477 16 208 4.54e-16 77.4
MS.gene030522.t1 MTR_1g105410 29.431 299 172 13 229 501 13 298 2.06e-18 86.7
MS.gene030522.t1 MTR_8g036880 26.667 285 180 7 227 490 102 378 5.27e-18 86.3
MS.gene030522.t1 MTR_4g018750 28.231 294 178 10 227 500 15 295 1.10e-17 84.3
MS.gene030522.t1 MTR_1g090330 30.168 179 113 5 310 481 4 177 1.96e-17 83.6
MS.gene030522.t1 MTR_1g090330 24.468 282 195 6 232 500 19 295 2.20e-16 80.1
MS.gene030522.t1 MTR_5g081910 26.296 270 155 10 266 498 53 315 2.70e-17 83.6
MS.gene030522.t1 MTR_8g066975 26.578 301 180 7 229 502 10 296 2.84e-17 82.8
MS.gene030522.t1 MTR_8g066975 28.426 197 121 7 321 502 8 199 1.78e-13 71.6
MS.gene030522.t1 MTR_4g078545 27.465 284 178 9 227 490 75 350 3.91e-17 83.6
MS.gene030522.t1 MTR_5g081910 29.245 212 119 8 314 498 34 241 8.30e-17 80.9
MS.gene030522.t1 MTR_1g088995 26.573 286 197 7 226 505 32 310 2.94e-16 80.1
MS.gene030522.t1 MTR_5g030530 26.910 301 189 8 224 502 5 296 4.48e-16 79.3
MS.gene030522.t1 MTR_2g098070 27.500 280 183 7 227 490 66 341 6.36e-16 79.7
MS.gene030522.t1 MTR_7g117030 25.098 255 171 7 266 503 85 336 2.44e-15 77.8
MS.gene030522.t1 MTR_7g066690 26.846 298 177 9 227 500 17 297 4.42e-15 76.3
MS.gene030522.t1 MTR_1g036280 25.168 298 166 10 260 504 64 357 1.28e-14 75.9
MS.gene030522.t1 MTR_2g032610 26.190 294 192 11 223 496 25 313 1.74e-14 74.7
MS.gene030522.t1 MTR_2g032610 26.804 194 125 3 224 400 123 316 5.48e-12 67.4
MS.gene030522.t1 MTR_4g057850 23.841 302 212 8 209 498 4 299 2.93e-14 73.9
MS.gene030522.t1 MTR_6g015860 23.377 308 208 8 214 500 4 304 3.85e-14 73.9
MS.gene030522.t1 MTR_6g015860 26.857 175 121 4 333 502 29 201 5.24e-13 70.5
MS.gene030522.t1 MTR_1g088995 28.846 156 104 3 325 479 37 186 1.05e-13 71.2
MS.gene030522.t1 MTR_4g088545 28.571 189 122 4 323 502 14 198 2.71e-13 70.1
MS.gene030522.t1 MTR_7g015870 22.330 309 198 9 220 500 18 312 3.20e-13 70.9
MS.gene030522.t1 MTR_7g015870 28.571 210 127 7 214 405 112 316 1.48e-12 68.9
MS.gene030522.t1 MTR_4g094578 23.404 282 197 9 227 499 29 300 3.41e-13 70.9
MS.gene030522.t1 MTR_1g026190 29.861 144 91 3 56 194 388 526 4.16e-13 72.0
MS.gene030522.t1 MTR_8g086070 31.325 166 102 5 324 485 24 181 5.19e-13 68.6
MS.gene030522.t1 MTR_6g033280 28.436 211 142 5 228 432 64 271 5.35e-13 70.9
MS.gene030522.t1 MTR_6g033280 25.281 178 122 4 324 498 66 235 7.99e-11 63.9
MS.gene030522.t1 MTR_4g088545 28.571 189 122 4 323 502 14 198 7.86e-13 69.3
MS.gene030522.t1 MTR_4g088545 28.571 189 122 4 323 502 14 198 1.30e-12 68.9
MS.gene030522.t1 MTR_7g015870 22.549 306 195 9 223 500 17 308 1.34e-12 69.3
MS.gene030522.t1 MTR_7g015870 28.708 209 126 7 214 404 108 311 2.98e-12 68.2
MS.gene030522.t1 MTR_4g132070 28.302 159 106 4 41 192 381 538 3.47e-12 68.9
MS.gene030522.t1 MTR_7g083790 30.734 218 136 7 229 435 83 296 3.47e-12 68.6
MS.gene030522.t1 MTR_3g462140 24.839 310 185 9 219 500 7 296 6.96e-12 66.6
MS.gene030522.t1 MTR_4g018750 27.481 262 157 10 227 468 15 263 9.99e-12 66.2
MS.gene030522.t1 MTR_3g090820 23.846 260 175 7 264 503 132 388 1.64e-11 66.6
MS.gene030522.t1 MTR_8g099910 27.602 221 139 6 229 435 74 287 1.82e-11 66.2
MS.gene030522.t1 MTR_8g099910 28.042 189 113 7 317 498 73 245 4.72e-11 64.7
MS.gene030522.t1 MTR_5g039730 27.241 290 182 10 229 498 13 293 1.97e-11 65.5
MS.gene030522.t1 MTR_5g009830 30.370 135 88 3 50 179 366 499 2.05e-11 66.6
MS.gene030522.t1 MTR_1g095780 24.016 254 164 8 57 289 360 605 4.54e-11 65.9
MS.gene030522.t1 MTR_4g132040 32.414 145 87 5 56 192 401 542 9.52e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene030522.t1 AT5G51050 74.349 499 121 3 9 505 5 498 0.0 768
MS.gene030522.t1 AT5G07320 75.158 475 110 2 31 505 13 479 0.0 748
MS.gene030522.t1 AT5G61810 68.763 477 139 4 30 505 11 478 0.0 689
MS.gene030522.t1 AT5G61810 70.640 344 91 4 163 505 1 335 1.03e-177 503
MS.gene030522.t1 AT4G01100 38.462 312 157 8 225 505 40 347 9.73e-63 209
MS.gene030522.t1 AT4G01100 35.411 353 169 11 204 505 17 361 7.05e-60 201
MS.gene030522.t1 AT4G01100 38.333 300 150 8 237 505 2 297 3.85e-59 197
MS.gene030522.t1 AT4G01100 25.714 175 125 1 330 499 1 175 1.72e-18 86.7
MS.gene030522.t1 AT4G01100 28.365 208 121 5 229 410 97 302 2.65e-14 73.9
MS.gene030522.t1 AT4G32400 36.918 279 170 3 225 502 112 385 2.51e-52 182
MS.gene030522.t1 AT4G32400 30.366 191 130 3 214 402 195 384 1.13e-17 85.5
MS.gene030522.t1 AT3G53940 35.274 292 171 6 227 503 73 361 4.28e-46 165
MS.gene030522.t1 AT3G53940 32.367 207 126 6 302 499 57 258 2.09e-21 96.3
MS.gene030522.t1 AT3G53940 29.060 234 133 6 176 402 152 359 5.81e-21 94.7
MS.gene030522.t1 AT4G26180 31.229 301 180 6 224 504 18 311 1.24e-44 160
MS.gene030522.t1 AT3G55640 34.114 299 173 9 219 499 30 322 2.16e-43 157
MS.gene030522.t1 AT3G55640 30.288 208 122 7 308 500 25 224 1.21e-19 90.5
MS.gene030522.t1 AT3G55640 34.114 299 173 9 219 499 30 322 2.16e-43 157
MS.gene030522.t1 AT3G55640 30.288 208 122 7 308 500 25 224 1.21e-19 90.5
MS.gene030522.t1 AT1G14560 31.930 285 166 8 238 499 38 317 8.69e-41 150
MS.gene030522.t1 AT1G14560 29.412 187 111 4 332 502 38 219 1.50e-19 90.1
MS.gene030522.t1 AT2G37890 31.757 296 174 6 227 502 45 332 2.45e-40 149
MS.gene030522.t1 AT2G37890 34.518 197 118 4 312 499 36 230 1.12e-24 105
MS.gene030522.t1 AT2G37890 35.326 184 109 5 226 402 151 331 6.27e-24 103
MS.gene030522.t1 AT4G26180 30.824 279 170 5 224 484 18 291 6.53e-39 143
MS.gene030522.t1 AT4G26180 32.663 199 115 4 318 502 18 211 3.55e-25 105
MS.gene030522.t1 AT3G21390 30.293 307 172 7 229 496 21 324 9.39e-36 136
MS.gene030522.t1 AT3G21390 29.319 191 120 3 323 500 21 209 3.22e-20 92.4
MS.gene030522.t1 AT3G21390 30.293 307 172 7 229 496 43 346 1.15e-35 136
MS.gene030522.t1 AT3G21390 29.319 191 120 3 323 500 43 231 4.51e-20 92.0
MS.gene030522.t1 AT1G14560 31.111 270 158 8 238 484 38 302 7.54e-35 133
MS.gene030522.t1 AT1G14560 29.412 187 111 4 332 502 38 219 7.62e-20 90.5
MS.gene030522.t1 AT5G64970 31.562 320 185 8 209 505 117 425 2.38e-34 134
MS.gene030522.t1 AT5G66380 33.677 291 174 6 229 502 12 300 3.55e-34 131
MS.gene030522.t1 AT3G51870 30.515 272 165 7 238 500 102 358 3.57e-34 133
MS.gene030522.t1 AT3G51870 30.409 171 106 3 337 502 107 269 1.28e-17 85.1
MS.gene030522.t1 AT3G51870 26.136 176 119 3 229 402 193 359 2.78e-14 75.1
MS.gene030522.t1 AT5G01500 31.868 273 160 9 238 500 130 386 3.22e-33 130
MS.gene030522.t1 AT5G01500 32.749 171 102 3 337 502 135 297 1.37e-19 91.3
MS.gene030522.t1 AT5G01500 29.310 174 116 2 229 402 221 387 2.71e-13 72.0
MS.gene030522.t1 AT5G64970 32.226 301 170 8 228 505 12 301 6.75e-33 127
MS.gene030522.t1 AT5G48970 29.545 308 174 8 229 496 24 328 2.51e-32 127
MS.gene030522.t1 AT5G48970 31.088 193 116 4 323 500 24 214 1.48e-20 93.2
MS.gene030522.t1 AT5G48970 26.190 210 124 6 220 401 126 332 1.55e-14 75.5
MS.gene030522.t1 AT3G20240 28.990 307 178 7 222 502 47 339 1.59e-29 119
MS.gene030522.t1 AT2G35800 23.395 483 335 12 23 502 355 805 5.97e-29 121
MS.gene030522.t1 AT2G47490 31.522 276 173 6 239 502 29 300 7.65e-29 116
MS.gene030522.t1 AT5G56450 26.073 303 198 6 222 503 29 326 9.38e-29 116
MS.gene030522.t1 AT1G78180 30.693 303 186 5 221 505 122 418 1.33e-28 118
MS.gene030522.t1 AT3G53940 35.321 218 125 5 227 431 73 287 2.33e-28 114
MS.gene030522.t1 AT3G53940 32.367 207 126 6 302 499 57 258 6.37e-22 96.3
MS.gene030522.t1 AT3G55640 34.061 229 129 7 219 431 30 252 4.26e-28 113
MS.gene030522.t1 AT3G55640 30.288 208 122 7 308 500 25 224 1.97e-20 91.3
MS.gene030522.t1 AT3G55640 34.061 229 129 7 219 431 30 252 4.26e-28 113
MS.gene030522.t1 AT3G55640 30.288 208 122 7 308 500 25 224 1.97e-20 91.3
MS.gene030522.t1 AT5G48970 30.000 260 156 7 260 496 1 257 2.57e-27 111
MS.gene030522.t1 AT5G48970 34.043 141 89 3 362 500 5 143 2.34e-17 82.4
MS.gene030522.t1 AT5G48970 26.190 210 124 6 220 401 55 261 3.16e-15 76.3
MS.gene030522.t1 AT5G64970 30.435 299 174 8 209 484 117 404 4.53e-27 113
MS.gene030522.t1 AT5G64970 28.649 185 124 3 315 499 129 305 1.16e-13 73.2
MS.gene030522.t1 AT1G25380 31.408 277 166 9 239 498 33 302 9.94e-27 111
MS.gene030522.t1 AT1G25380 31.408 277 166 9 239 498 33 302 9.94e-27 111
MS.gene030522.t1 AT1G14560 32.161 199 111 6 321 499 25 219 6.63e-26 106
MS.gene030522.t1 AT1G14560 27.966 118 69 2 401 502 4 121 1.16e-11 65.1
MS.gene030522.t1 AT1G14560 25.500 200 120 5 227 401 25 220 3.25e-11 63.9
MS.gene030522.t1 AT1G74240 27.476 313 182 6 225 502 34 336 2.07e-25 107
MS.gene030522.t1 AT1G74240 26.601 203 122 4 324 503 39 237 1.45e-14 75.5
MS.gene030522.t1 AT1G34065 28.669 293 171 9 220 503 73 336 1.46e-22 99.4
MS.gene030522.t1 AT1G34065 28.669 293 171 9 220 503 66 329 1.52e-22 99.0
MS.gene030522.t1 AT5G17400 28.669 293 183 8 217 490 4 289 1.91e-22 98.2
MS.gene030522.t1 AT4G11440 26.102 295 208 4 214 504 317 605 5.96e-22 99.8
MS.gene030522.t1 AT4G11440 26.102 295 208 4 214 504 317 605 5.96e-22 99.8
MS.gene030522.t1 AT2G30160 27.915 283 186 5 228 499 43 318 1.89e-21 95.9
MS.gene030522.t1 AT2G30160 27.322 183 123 4 321 502 42 215 3.18e-14 74.3
MS.gene030522.t1 AT1G74240 26.441 295 172 6 243 502 4 288 2.76e-21 95.1
MS.gene030522.t1 AT1G74240 25.521 192 116 4 335 503 2 189 1.57e-11 65.9
MS.gene030522.t1 AT1G14140 26.855 283 186 9 232 499 21 297 1.31e-20 92.8
MS.gene030522.t1 AT1G14140 27.746 173 117 4 317 481 12 184 6.23e-15 75.9
MS.gene030522.t1 AT1G07030 28.472 288 181 7 225 499 38 313 1.44e-20 93.2
MS.gene030522.t1 AT1G07030 27.473 182 124 2 321 502 40 213 1.72e-15 78.2
MS.gene030522.t1 AT4G39460 29.391 279 169 6 227 502 58 311 2.05e-20 92.8
MS.gene030522.t1 AT4G39460 29.391 279 169 6 227 502 58 311 2.05e-20 92.8
MS.gene030522.t1 AT4G39460 29.391 279 169 6 227 502 58 311 2.05e-20 92.8
MS.gene030522.t1 AT5G58970 26.990 289 188 6 227 500 16 296 4.21e-20 91.3
MS.gene030522.t1 AT4G28390 27.817 284 177 9 227 490 83 358 1.14e-18 88.2
MS.gene030522.t1 AT4G28390 27.817 284 177 9 227 490 83 358 1.14e-18 88.2
MS.gene030522.t1 AT3G54110 28.082 292 185 8 225 500 13 295 1.29e-18 87.0
MS.gene030522.t1 AT5G46800 26.263 297 189 7 229 502 10 299 2.12e-18 86.3
MS.gene030522.t1 AT5G46800 26.263 297 189 7 229 502 10 299 2.12e-18 86.3
MS.gene030522.t1 AT5G46800 26.263 297 189 7 229 502 10 299 2.12e-18 86.3
MS.gene030522.t1 AT5G13490 27.148 291 171 10 227 490 88 364 2.81e-17 84.0
MS.gene030522.t1 AT5G13490 27.148 291 171 10 227 490 88 364 2.81e-17 84.0
MS.gene030522.t1 AT5G42130 26.316 266 178 5 243 499 134 390 5.00e-17 83.6
MS.gene030522.t1 AT3G08580 26.316 285 181 7 227 490 84 360 1.04e-16 82.4
MS.gene030522.t1 AT3G08580 26.316 285 181 7 227 490 84 360 1.04e-16 82.4
MS.gene030522.t1 AT1G79900 24.621 264 191 2 233 496 22 277 4.63e-16 79.3
MS.gene030522.t1 AT1G79900 30.409 171 111 4 230 397 112 277 2.74e-14 73.9
MS.gene030522.t1 AT3G05290 27.703 296 175 12 229 498 13 295 1.79e-15 77.8
MS.gene030522.t1 AT2G39970 23.810 273 172 9 266 504 53 323 6.32e-15 76.3
MS.gene030522.t1 AT5G15640 24.013 304 207 7 217 500 11 310 1.50e-14 75.1
MS.gene030522.t1 AT5G27520 28.231 294 176 11 229 498 15 297 2.66e-14 74.3
MS.gene030522.t1 AT2G33820 25.249 301 192 11 227 504 18 308 3.58e-14 73.9
MS.gene030522.t1 AT5G26200 27.273 308 195 10 219 500 31 335 5.63e-14 73.6
MS.gene030522.t1 AT5G26200 28.378 222 132 8 210 405 119 339 3.09e-11 65.5
MS.gene030522.t1 AT5G01340 23.345 287 195 9 228 498 18 295 6.15e-14 73.2
MS.gene030522.t1 AT5G15640 23.826 298 203 7 223 500 24 317 7.25e-14 73.2
MS.gene030522.t1 AT2G26360 25.532 282 194 7 222 502 110 376 7.50e-14 73.6
MS.gene030522.t1 AT4G04720 29.861 144 94 3 42 179 370 512 4.74e-13 72.0
MS.gene030522.t1 AT4G04720 29.861 144 94 3 42 179 370 512 4.74e-13 72.0
MS.gene030522.t1 AT4G04740 30.935 139 90 2 50 183 368 505 5.06e-13 71.6
MS.gene030522.t1 AT4G04740 30.935 139 90 2 50 183 368 505 5.06e-13 71.6
MS.gene030522.t1 AT4G04740 30.935 139 90 2 50 183 368 505 5.06e-13 71.6
MS.gene030522.t1 AT4G04740 30.935 139 90 2 50 183 368 505 5.06e-13 71.6
MS.gene030522.t1 AT4G04740 30.935 139 90 2 50 183 368 505 5.06e-13 71.6
MS.gene030522.t1 AT4G04740 30.935 139 90 2 50 183 368 505 5.06e-13 71.6
MS.gene030522.t1 AT4G27940 24.506 253 169 5 266 499 155 404 1.01e-12 70.5
MS.gene030522.t1 AT3G48850 27.119 177 120 3 323 497 73 242 2.05e-12 68.9
MS.gene030522.t1 AT3G48850 29.258 229 146 7 220 435 60 285 2.53e-11 65.9
MS.gene030522.t1 AT4G04695 30.935 139 90 2 50 183 331 468 4.34e-12 68.6
MS.gene030522.t1 AT4G24570 23.750 320 189 9 225 502 4 310 4.48e-12 67.4
MS.gene030522.t1 AT2G33820 24.595 309 192 12 227 504 18 316 5.02e-12 67.4
MS.gene030522.t1 AT1G72820 22.581 310 208 6 223 500 27 336 6.08e-12 67.4
MS.gene030522.t1 AT1G72820 25.974 231 135 7 210 405 111 340 8.97e-12 67.0
MS.gene030522.t1 AT1G72820 22.581 310 208 6 223 500 27 336 6.08e-12 67.4
MS.gene030522.t1 AT1G72820 25.974 231 135 7 210 405 111 340 8.97e-12 67.0
MS.gene030522.t1 AT5G14040 26.344 186 122 5 318 498 79 254 7.27e-12 67.4
MS.gene030522.t1 AT5G14040 29.200 250 159 9 230 465 84 329 4.95e-11 65.1
MS.gene030522.t1 AT4G03115 23.860 285 191 7 226 499 69 338 2.85e-11 65.5
MS.gene030522.t1 AT4G21940 28.472 144 96 3 42 179 392 534 3.19e-11 66.2
MS.gene030522.t1 AT4G21940 28.472 144 96 3 42 179 392 534 3.37e-11 66.2
MS.gene030522.t1 AT4G03115 26.923 182 117 6 325 502 42 211 6.54e-11 62.8
MS.gene030522.t1 AT4G03115 23.860 285 191 7 226 499 37 306 6.77e-11 63.9
MS.gene030522.t1 AT4G03115 26.923 182 117 6 325 502 42 211 8.30e-11 62.4

Find 129 sgRNAs with CRISPR-Local

Find 302 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCTACTAATAAAGGGTATT+TGG 0.097879 4.2:+7744002 MS.gene030522:CDS
TGGCAACGAGACGGTTTATT+AGG 0.203876 4.2:+7745999 MS.gene030522:CDS
TTCTTTGACGCTACTAATAA+AGG 0.205124 4.2:+7743994 MS.gene030522:CDS
CTTGGATGTGGGACAGTTTC+GGG 0.228064 4.2:+7746578 MS.gene030522:CDS
GGCCTTGTTCCATCTCTTCT+TGG 0.236132 4.2:+7746326 MS.gene030522:CDS
GTCAGATATAATATATTTCT+TGG 0.259740 4.2:-7746405 None:intergenic
AGAAGTCGCCGGAGATGATT+TGG 0.282313 4.2:-7743854 None:intergenic
TTCAATGGATCATGTTCTAT+TGG 0.289968 4.2:+7743918 MS.gene030522:CDS
TCCTTAGCGTATTTATATTC+AGG 0.290117 4.2:-7744069 None:intergenic
CTCGAAAGCCTTCGTCCTTA+AGG 0.303116 4.2:-7747245 None:intergenic
GGCACAACTTTGAGGAGATT+TGG 0.303845 4.2:-7747288 None:intergenic
CGCCGGAGATGATTTGGGTT+TGG 0.315050 4.2:-7743848 None:intergenic
TATTCTTCCTGAAGAACTTT+GGG 0.325825 4.2:+7744221 MS.gene030522:CDS
ACCCACGTGGTCCATGTCTA+TGG 0.340694 4.2:-7743821 None:intergenic
TTCATAAGCATAAAACTTGA+TGG 0.341735 4.2:-7746072 None:intergenic
ACTTGGATGTGGGACAGTTT+CGG 0.345888 4.2:+7746577 MS.gene030522:CDS
GAACCCTTACAAAGGATATA+TGG 0.347440 4.2:+7746273 MS.gene030522:CDS
TCGAAAGCCTTCGTCCTTAA+GGG 0.350475 4.2:-7747244 None:intergenic
CTTCATTACTGCTGGCATAA+TGG 0.353220 4.2:-7745973 None:intergenic
AACACAACAAAACACATGTC+TGG 0.372831 4.2:+7743796 None:intergenic
AGAGCATCCCAAAGTTCTTC+AGG 0.374338 4.2:-7744228 None:intergenic
TGCCATGCTTCTCAGGCTGC+AGG 0.378131 4.2:+7747164 MS.gene030522:intron
GGCAACGAGACGGTTTATTA+GGG 0.381008 4.2:+7746000 MS.gene030522:CDS
GCTATTGATGTTGAACATAA+TGG 0.381502 4.2:+7744195 MS.gene030522:CDS
CAACACTTCTAGTGCTTACA+AGG 0.382786 4.2:+7747197 MS.gene030522:CDS
GGATCCATATATCCTTTGTA+AGG 0.391902 4.2:-7746277 None:intergenic
TTTCTTGGATATATCTTTCA+AGG 0.392181 4.2:-7746390 None:intergenic
GTATTCTTCCTGAAGAACTT+TGG 0.396947 4.2:+7744220 MS.gene030522:CDS
ATGATCCATTGAAATTGAAC+CGG 0.400793 4.2:-7743908 None:intergenic
TATCCTTTGTAAGGGTTCCT+AGG 0.406046 4.2:-7746268 None:intergenic
AAAACCCGGTTCAATTTCAA+TGG 0.407985 4.2:+7743903 MS.gene030522:CDS
TCTTTGACGCTACTAATAAA+GGG 0.413870 4.2:+7743995 MS.gene030522:CDS
TGCCAGCAGTAATGAAGATA+TGG 0.415808 4.2:+7745979 MS.gene030522:CDS
GAAGTCGCCGGAGATGATTT+GGG 0.420586 4.2:-7743853 None:intergenic
CAAGGGAACAAGTCAGATAT+TGG 0.420941 4.2:+7746122 MS.gene030522:CDS
TTTGTAAGGGTTCCTAGGTT+CGG 0.421581 4.2:-7746263 None:intergenic
GGGACAGTTTCGGGAGCTCT+TGG 0.425562 4.2:+7746587 MS.gene030522:CDS
CTTTGTTGAGCATGTTGATA+AGG 0.428962 4.2:+7745680 MS.gene030522:CDS
AAGAAAGGGATGTTCGTATT+CGG 0.433508 4.2:+7743959 MS.gene030522:CDS
ACATGCTTGCTGATGCCTTC+AGG 0.436950 4.2:-7745837 None:intergenic
CATGTTGATAAGGATAATAA+TGG 0.437979 4.2:+7745690 MS.gene030522:CDS
TGCCATATCTTCATTACTGC+TGG 0.447668 4.2:-7745981 None:intergenic
CTTGGTATGATTCCTTATGC+AGG 0.448812 4.2:+7746344 MS.gene030522:CDS
TGAAAATATATATCAACATT+GGG 0.450630 4.2:+7745773 MS.gene030522:CDS
TTGCAGCCGGCACAACTTTG+AGG 0.450795 4.2:-7747296 None:intergenic
ACACAACAAAACACATGTCT+GGG 0.452954 4.2:+7743797 None:intergenic
ATTGGCTTTGCGTGAGACTA+AGG 0.453356 4.2:+7743936 MS.gene030522:CDS
AGAAAGCCCGGGGTCCCTCT+TGG 0.455646 4.2:-7746298 None:intergenic
CATTGGATCTTATCAAAACT+AGG 0.459278 4.2:+7746207 MS.gene030522:CDS
GATTATGCTCACATTGAAGC+AGG 0.464288 4.2:+7744024 MS.gene030522:CDS
TGGGATGCTCTTGTCAAGGC+TGG 0.469628 4.2:+7744240 MS.gene030522:CDS
GGACCCCGGGCTTTCTATAG+AGG 0.470590 4.2:+7746305 MS.gene030522:CDS
GGCTGCAAGTATTACTTACA+TGG 0.473791 4.2:+7747311 MS.gene030522:CDS
CAAGGCCTCTATAGAAAGCC+CGG 0.474710 4.2:-7746310 None:intergenic
GTGAGATCAATGCCTGCATA+AGG 0.489678 4.2:-7746356 None:intergenic
TTGAAAATATATATCAACAT+TGG 0.489803 4.2:+7745772 MS.gene030522:CDS
CTTGTAAGCACTAGAAGTGT+TGG 0.492262 4.2:-7747196 None:intergenic
CTTAAGGACGAAGGCTTTCG+AGG 0.496296 4.2:+7747246 MS.gene030522:CDS
TGCGTGAGACTAAGGAAGAA+AGG 0.499336 4.2:+7743944 MS.gene030522:CDS
TAAAACTTGATGGCGCTCTC+AGG 0.501460 4.2:-7746062 None:intergenic
CCTGGTCCTCTAGTACAACT+TGG 0.503374 4.2:+7746560 MS.gene030522:CDS
TACTTGTGTCTATCCACTGC+AGG 0.508122 4.2:+7746613 MS.gene030522:CDS
CTCCAAACCCAAATCATCTC+CGG 0.511140 4.2:+7743846 MS.gene030522:CDS
CTTGTTCTCCAATGTCTACA+AGG 0.511918 4.2:-7745806 None:intergenic
CACTGCAGGTTATTCGTACA+AGG 0.514518 4.2:+7746627 MS.gene030522:CDS
TGCTCCTCTTGATCGTCTAA+AGG 0.526318 4.2:+7745920 MS.gene030522:CDS
ACAGATTGCTATCTATCCAT+TGG 0.526332 4.2:+7746190 MS.gene030522:CDS
CCTCTAGTACAACTTGGATG+TGG 0.526958 4.2:+7746566 MS.gene030522:CDS
AAGTCAGATATTGGTACTGC+CGG 0.527417 4.2:+7746131 MS.gene030522:CDS
AAATCTCCTCAAAGTTGTGC+CGG 0.530979 4.2:+7747290 MS.gene030522:CDS
GATCCATATATCCTTTGTAA+GGG 0.533301 4.2:-7746276 None:intergenic
TGATCCATTGAAATTGAACC+GGG 0.535986 4.2:-7743907 None:intergenic
CCGACCACCGATCACGGCCG+TGG 0.537152 4.2:+7743877 MS.gene030522:CDS
CCAAGTTGTACTAGAGGACC+AGG 0.543145 4.2:-7746560 None:intergenic
ACTTCTCCGACCACCGATCA+CGG 0.543289 4.2:+7743871 MS.gene030522:CDS
TATGGATCCAAGAGGGACCC+CGG 0.549177 4.2:+7746291 MS.gene030522:CDS
GCGTGAGACTAAGGAAGAAA+GGG 0.551313 4.2:+7743945 MS.gene030522:CDS
GGAATCATACCAAGAAGAGA+TGG 0.555459 4.2:-7746335 None:intergenic
CAGACTTGTGCGTCTGAAGG+TGG 0.555942 4.2:+7746233 MS.gene030522:CDS
AGGCTTTCGAGGGTTCTACA+AGG 0.560865 4.2:+7747257 MS.gene030522:CDS
GGTGGAAAGGCTCCGAACCT+AGG 0.563950 4.2:+7746251 MS.gene030522:CDS
ATTTGTGATGCTGATAGAGA+TGG 0.565356 4.2:+7744102 MS.gene030522:CDS
CATGTCTGGGGCCATAGACA+TGG 0.566057 4.2:+7743810 None:intergenic
CCACGGCCGTGATCGGTGGT+CGG 0.567990 4.2:-7743877 None:intergenic
ATGGATCCAAGAGGGACCCC+GGG 0.571593 4.2:+7746292 MS.gene030522:CDS
ATATATATCAACATTGGGAG+AGG 0.571984 4.2:+7745778 MS.gene030522:CDS
AAGGCCTCTATAGAAAGCCC+GGG 0.573250 4.2:-7746309 None:intergenic
TTAGCGTATTTATATTCAGG+TGG 0.576089 4.2:-7744066 None:intergenic
GTGGTCTTACAAATTCAGAC+TGG 0.577576 4.2:+7745942 MS.gene030522:CDS
CTCTAGTACAACTTGGATGT+GGG 0.578834 4.2:+7746567 MS.gene030522:CDS
AGGGTATGCCTTGTAGACAT+TGG 0.583161 4.2:+7745798 MS.gene030522:CDS
TTACAGACTTGTGCGTCTGA+AGG 0.583228 4.2:+7746230 MS.gene030522:CDS
GCATCAGCAAGCATGTGCAC+AGG 0.584381 4.2:+7745844 MS.gene030522:CDS
AATGTAATTGGAGATAGTCA+AGG 0.585996 4.2:+7746104 MS.gene030522:CDS
TGGAAAACCCTTAAGGACGA+AGG 0.588718 4.2:+7747237 MS.gene030522:CDS
TTGTGCGTCTGAAGGTGGAA+AGG 0.589865 4.2:+7746238 MS.gene030522:CDS
CTTGTACGAATAACCTGCAG+TGG 0.590465 4.2:-7746626 None:intergenic
TAATGGGTTGAATGTTGTGA+AGG 0.593361 4.2:+7746034 MS.gene030522:CDS
TTAAGGACGAAGGCTTTCGA+GGG 0.595236 4.2:+7747247 MS.gene030522:CDS
ACCTGAATATAAATACGCTA+AGG 0.597962 4.2:+7744068 MS.gene030522:CDS
ACTTTGGGATGCTCTTGTCA+AGG 0.602469 4.2:+7744236 MS.gene030522:CDS
ATGTAATTGGAGATAGTCAA+GGG 0.608848 4.2:+7746105 MS.gene030522:CDS
ACCACCTTTAGACGATCAAG+AGG 0.609465 4.2:-7745924 None:intergenic
ATTATGCTCACATTGAAGCA+GGG 0.615028 4.2:+7744025 MS.gene030522:CDS
TAAGCACTAGAAGTGTTGGT+AGG 0.615335 4.2:-7747192 None:intergenic
TTTGTGATGCTGATAGAGAT+GGG 0.615874 4.2:+7744103 MS.gene030522:CDS
GAACAAGCTGTCATTCCTGA+AGG 0.618005 4.2:+7745822 MS.gene030522:CDS
GGCTTTCGAGGGTTCTACAA+GGG 0.618467 4.2:+7747258 MS.gene030522:CDS
TATATATCAACATTGGGAGA+GGG 0.618834 4.2:+7745779 MS.gene030522:CDS
GGCCATAGACATGGACCACG+TGG 0.619134 4.2:+7743819 MS.gene030522:CDS
CAACATTCAACCCATTACCT+CGG 0.628881 4.2:-7746028 None:intergenic
ATGTAAGTAATACTTGCAGC+CGG 0.630205 4.2:-7747309 None:intergenic
TCCTCTTGATCGTCTAAAGG+TGG 0.632322 4.2:+7745923 MS.gene030522:CDS
CCACATCCAAGTTGTACTAG+AGG 0.639833 4.2:-7746566 None:intergenic
ATAGATAGCAATCTGTGCAA+TGG 0.645374 4.2:-7746183 None:intergenic
TCGGTGGTCGGAGAAGTCGC+CGG 0.645691 4.2:-7743865 None:intergenic
CTTACAAATTCAGACTGGAA+AGG 0.645930 4.2:+7745947 MS.gene030522:CDS
AAGGATATATGGATCCAAGA+GGG 0.650322 4.2:+7746284 MS.gene030522:CDS
TACCAAGAAGAGATGGAACA+AGG 0.652820 4.2:-7746328 None:intergenic
AACACTTCTAGTGCTTACAA+GGG 0.655900 4.2:+7747198 MS.gene030522:CDS
AAATATATTATATCTGACCA+TGG 0.657158 4.2:+7746410 MS.gene030522:CDS
CACAACAAAACACATGTCTG+GGG 0.666612 4.2:+7743798 None:intergenic
ATGAAGATATGGCAACGAGA+CGG 0.675716 4.2:+7745990 MS.gene030522:CDS
TGCAGGGATTGAAATTGATG+AGG 0.683016 4.2:+7745644 MS.gene030522:intron
GCCATAGACATGGACCACGT+GGG 0.686014 4.2:+7743820 MS.gene030522:CDS
AAAGGATATATGGATCCAAG+AGG 0.690784 4.2:+7746283 MS.gene030522:CDS
GAACCTAGGAACCCTTACAA+AGG 0.697269 4.2:+7746265 MS.gene030522:CDS
AGGCCTCTATAGAAAGCCCG+GGG 0.730497 4.2:-7746308 None:intergenic
TGGGTTTGGAGAAACCCACG+TGG 0.761132 4.2:-7743834 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTATCAATAAGAATATA+AGG - chr4.2:7746490-7746509 None:intergenic 10.0%
!!! TAAAAGGTTAAATTTTATTT+TGG - chr4.2:7747107-7747126 None:intergenic 10.0%
!!! TACATATTTTATAACAAATA+GGG + chr4.2:7744478-7744497 MS.gene030522:intron 10.0%
!! ATATATATGAGTTATAACTA+TGG - chr4.2:7745241-7745260 None:intergenic 15.0%
!! TAAATAACTATGAATTTGTA+TGG + chr4.2:7745389-7745408 MS.gene030522:intron 15.0%
!! TACATTGTATAAATTCTAAA+AGG - chr4.2:7747123-7747142 None:intergenic 15.0%
!! TGAAAATATATATCAACATT+GGG + chr4.2:7745773-7745792 MS.gene030522:CDS 15.0%
!! TTAATAAAAACAAGAGAAAA+CGG - chr4.2:7745043-7745062 None:intergenic 15.0%
!! TTGAAAATATATATCAACAT+TGG + chr4.2:7745772-7745791 MS.gene030522:CDS 15.0%
!!! AATGTTGATATATATTTTCA+AGG - chr4.2:7745773-7745792 None:intergenic 15.0%
!!! ATGTTGATATATATTTTCAA+GGG - chr4.2:7745772-7745791 None:intergenic 15.0%
!!! CCATTTTTTAAAATTATAAC+CGG - chr4.2:7744367-7744386 None:intergenic 15.0%
!!! CTACATATTTTATAACAAAT+AGG + chr4.2:7744477-7744496 MS.gene030522:intron 15.0%
!! AAATATATTATATCTGACCA+TGG + chr4.2:7746410-7746429 MS.gene030522:CDS 20.0%
!! AACATACTAACATCAAAAAA+AGG - chr4.2:7744616-7744635 None:intergenic 20.0%
!! ATTTATATACTAGGTCTTTA+AGG + chr4.2:7745533-7745552 MS.gene030522:intron 20.0%
!! GCTATAGTAAACATTAATAT+TGG + chr4.2:7744545-7744564 MS.gene030522:intron 20.0%
!! GCTTATAGAAAAAATTTCAA+AGG + chr4.2:7745359-7745378 MS.gene030522:intron 20.0%
!! GGCATTATTATTTATATACT+AGG + chr4.2:7745524-7745543 MS.gene030522:intron 20.0%
!! GTCAGATATAATATATTTCT+TGG - chr4.2:7746408-7746427 None:intergenic 20.0%
!! TAGTAAACATTAATATTGGT+TGG + chr4.2:7744549-7744568 MS.gene030522:intron 20.0%
!!! AGTAAACATTAATATTGGTT+GGG + chr4.2:7744550-7744569 MS.gene030522:intron 20.0%
!!! ATATGTCCTTTAGTTATTTT+AGG + chr4.2:7746772-7746791 MS.gene030522:intron 20.0%
!!! ATATTTTATAACAAATAGGG+AGG + chr4.2:7744481-7744500 MS.gene030522:intron 20.0%
!!! CCGGTTATAATTTTAAAAAA+TGG + chr4.2:7744364-7744383 MS.gene030522:intron 20.0%
!!! TTGATTATCATGATTTTAGA+CGG + chr4.2:7744130-7744149 MS.gene030522:CDS 20.0%
! AAAAAAAACTTAAGGACCAA+AGG - chr4.2:7746802-7746821 None:intergenic 25.0%
! AAAAAAACTTAAGGACCAAA+GGG - chr4.2:7746801-7746820 None:intergenic 25.0%
! AAATGGGAAAATATCTCATA+TGG + chr4.2:7744847-7744866 MS.gene030522:intron 25.0%
! AACTCAATCTCATTTAGAAA+AGG - chr4.2:7744809-7744828 None:intergenic 25.0%
! AAGTGACATAATTAACAAGA+GGG - chr4.2:7744279-7744298 None:intergenic 25.0%
! ACAATGAGAAAATGAAACAA+GGG - chr4.2:7745591-7745610 None:intergenic 25.0%
! AGTGGAACAAAAAAAACTTA+AGG - chr4.2:7746810-7746829 None:intergenic 25.0%
! ATGGAACGAAAAAAAACTTA+AGG + chr4.2:7747048-7747067 MS.gene030522:intron 25.0%
! CAAATGAAAAACTGAAAGAA+AGG + chr4.2:7746990-7747009 MS.gene030522:intron 25.0%
! GAAATGCTGAAAAATGTAAT+TGG + chr4.2:7746092-7746111 MS.gene030522:CDS 25.0%
! GTCTAACATTCGTAAATTAA+GGG - chr4.2:7746838-7746857 None:intergenic 25.0%
! TAAAACCTGAAAACAACTTA+AGG + chr4.2:7747079-7747098 MS.gene030522:intron 25.0%
! TAAGTGACATAATTAACAAG+AGG - chr4.2:7744280-7744299 None:intergenic 25.0%
! TACAATGAGAAAATGAAACA+AGG - chr4.2:7745592-7745611 None:intergenic 25.0%
! TGGAACGAAAAAAAACTTAA+GGG + chr4.2:7747049-7747068 MS.gene030522:intron 25.0%
! TGTCTAACATTCGTAAATTA+AGG - chr4.2:7746839-7746858 None:intergenic 25.0%
! TTCATAAGCATAAAACTTGA+TGG - chr4.2:7746075-7746094 None:intergenic 25.0%
! TTTCTTGGATATATCTTTCA+AGG - chr4.2:7746393-7746412 None:intergenic 25.0%
!! AAGAAGAAAAGAGCATAAAA+AGG - chr4.2:7746533-7746552 None:intergenic 25.0%
!! AGATATTTTCCCATTTTAGA+AGG - chr4.2:7744843-7744862 None:intergenic 25.0%
!! CATGTTGATAAGGATAATAA+TGG + chr4.2:7745690-7745709 MS.gene030522:CDS 25.0%
!! GTAAACATTAATATTGGTTG+GGG + chr4.2:7744551-7744570 MS.gene030522:intron 25.0%
!! TAAACATTAATATTGGTTGG+GGG + chr4.2:7744552-7744571 MS.gene030522:intron 25.0%
!! TTTACGAATGTTAGACATTT+TGG + chr4.2:7746842-7746861 MS.gene030522:intron 25.0%
!! TTTTGATGTTAGTATGTTGT+TGG + chr4.2:7744618-7744637 MS.gene030522:intron 25.0%
!!! AAGTTTTTTTTGTTCCACTT+TGG + chr4.2:7746811-7746830 MS.gene030522:intron 25.0%
!!! AGTTTTTTTTCGTTCCATTT+TGG - chr4.2:7747046-7747065 None:intergenic 25.0%
!!! GAATTATCACTTTTGAAGAA+TGG + chr4.2:7745712-7745731 MS.gene030522:CDS 25.0%
AAAAAGGAATAAGCATGCAA+TGG - chr4.2:7744600-7744619 None:intergenic 30.0%
AAAAGAAACATGCATTCACA+AGG - chr4.2:7745325-7745344 None:intergenic 30.0%
AAACAAGAGAAAACGGATAT+AGG - chr4.2:7745036-7745055 None:intergenic 30.0%
AAGAAGGAAACACAAGAAAT+GGG + chr4.2:7746952-7746971 MS.gene030522:intron 30.0%
AATCTGTACCATTTGTAACT+TGG + chr4.2:7747018-7747037 MS.gene030522:intron 30.0%
AATGAGATTGAGTTTCACAA+AGG + chr4.2:7744815-7744834 MS.gene030522:intron 30.0%
AATGTAATTGGAGATAGTCA+AGG + chr4.2:7746104-7746123 MS.gene030522:CDS 30.0%
AATTGAAACAGTGATCCAAT+CGG + chr4.2:7744958-7744977 MS.gene030522:intron 30.0%
ACATGAGTTTCTCTACTTAT+GGG - chr4.2:7744923-7744942 None:intergenic 30.0%
ACCTGAATATAAATACGCTA+AGG + chr4.2:7744068-7744087 MS.gene030522:CDS 30.0%
AGTGACATAATTAACAAGAG+GGG - chr4.2:7744278-7744297 None:intergenic 30.0%
ATATATATCAACATTGGGAG+AGG + chr4.2:7745778-7745797 MS.gene030522:CDS 30.0%
ATCAAAGATTGAAGTCGAAT+CGG - chr4.2:7745441-7745460 None:intergenic 30.0%
ATCTGTACCATTTGTAACTT+GGG + chr4.2:7747019-7747038 MS.gene030522:intron 30.0%
ATGATCCATTGAAATTGAAC+CGG - chr4.2:7743911-7743930 None:intergenic 30.0%
ATGGAAAAATCTTCCACAAA+AGG - chr4.2:7745567-7745586 None:intergenic 30.0%
ATGTAATTGGAGATAGTCAA+GGG + chr4.2:7746105-7746124 MS.gene030522:CDS 30.0%
CAAAAGCAAATAATGAGTGT+GGG + chr4.2:7746696-7746715 MS.gene030522:intron 30.0%
CATTGGATCTTATCAAAACT+AGG + chr4.2:7746207-7746226 MS.gene030522:CDS 30.0%
CCAGAGAAAAACATTACTTA+TGG - chr4.2:7746665-7746684 None:intergenic 30.0%
GATCCATATATCCTTTGTAA+GGG - chr4.2:7746279-7746298 None:intergenic 30.0%
GCTATTGATGTTGAACATAA+TGG + chr4.2:7744195-7744214 MS.gene030522:CDS 30.0%
GGGAAACCTAAAATAACTAA+AGG - chr4.2:7746781-7746800 None:intergenic 30.0%
TAAGTTAAAGAGATCAAGAG+TGG - chr4.2:7746449-7746468 None:intergenic 30.0%
TACATGAGTTTCTCTACTTA+TGG - chr4.2:7744924-7744943 None:intergenic 30.0%
TATATATCAACATTGGGAGA+GGG + chr4.2:7745779-7745798 MS.gene030522:CDS 30.0%
TATGAATTTGTATGGTGTGT+GGG + chr4.2:7745397-7745416 MS.gene030522:intron 30.0%
TATTCTTCCTGAAGAACTTT+GGG + chr4.2:7744221-7744240 MS.gene030522:CDS 30.0%
TCCTTAGCGTATTTATATTC+AGG - chr4.2:7744072-7744091 None:intergenic 30.0%
TCTTTGACGCTACTAATAAA+GGG + chr4.2:7743995-7744014 MS.gene030522:CDS 30.0%
TGGAAAAATCTTCCACAAAA+GGG - chr4.2:7745566-7745585 None:intergenic 30.0%
TTAGCGTATTTATATTCAGG+TGG - chr4.2:7744069-7744088 None:intergenic 30.0%
TTCAATGGATCATGTTCTAT+TGG + chr4.2:7743918-7743937 MS.gene030522:CDS 30.0%
TTCTTTGACGCTACTAATAA+AGG + chr4.2:7743994-7744013 MS.gene030522:CDS 30.0%
TTGAAAATCGGTCAAAACTT+TGG - chr4.2:7745145-7745164 None:intergenic 30.0%
! AAACATTAATATTGGTTGGG+GGG + chr4.2:7744553-7744572 MS.gene030522:intron 30.0%
! CCATAAGTAATGTTTTTCTC+TGG + chr4.2:7746662-7746681 MS.gene030522:intron 30.0%
! TATATACTAGGTCTTTAAGG+TGG + chr4.2:7745536-7745555 MS.gene030522:intron 30.0%
! TCATGATTTTAGACGGTATA+TGG + chr4.2:7744137-7744156 MS.gene030522:CDS 30.0%
!! ACAAAGGTTCCTTCTAAAAT+GGG + chr4.2:7744831-7744850 MS.gene030522:intron 30.0%
!! ACACTCATTATTTGCTTTTG+GGG - chr4.2:7746696-7746715 None:intergenic 30.0%
!! CACACTCATTATTTGCTTTT+GGG - chr4.2:7746697-7746716 None:intergenic 30.0%
!! CTTGATAGCTAGCTTTATAA+TGG + chr4.2:7746736-7746755 MS.gene030522:intron 30.0%
!!! AGTTATTTTAGGTTTCCCTT+TGG + chr4.2:7746783-7746802 MS.gene030522:intron 30.0%
!!! CTAGTTTTGATAAGATCCAA+TGG - chr4.2:7746209-7746228 None:intergenic 30.0%
!!! CTTGTTACTTTTCCTTGATT+GGG + chr4.2:7744648-7744667 MS.gene030522:intron 30.0%
!!! GTTGTTTTCAGGTTTTACTT+TGG - chr4.2:7747076-7747095 None:intergenic 30.0%
!!! TGTTTTTTGGAAAACCCTTA+AGG + chr4.2:7747230-7747249 MS.gene030522:CDS 30.0%
!!! TTCCTTGTTTTTTACTGAAC+CGG - chr4.2:7744986-7745005 None:intergenic 30.0%
AAAACCCGGTTCAATTTCAA+TGG + chr4.2:7743903-7743922 MS.gene030522:CDS 35.0%
AAAGGATATATGGATCCAAG+AGG + chr4.2:7746283-7746302 MS.gene030522:CDS 35.0%
AACACTTCTAGTGCTTACAA+GGG + chr4.2:7747198-7747217 MS.gene030522:CDS 35.0%
AACATTTCTTGTCCCAATCA+AGG - chr4.2:7744663-7744682 None:intergenic 35.0%
AAGAAAGGGATGTTCGTATT+CGG + chr4.2:7743959-7743978 MS.gene030522:CDS 35.0%
AAGGATATATGGATCCAAGA+GGG + chr4.2:7746284-7746303 MS.gene030522:CDS 35.0%
AATCTAAGTTTCTTCGAGCA+AGG - chr4.2:7744751-7744770 None:intergenic 35.0%
ACAGATTGCTATCTATCCAT+TGG + chr4.2:7746190-7746209 MS.gene030522:CDS 35.0%
ACTTGCTTACTTTATCGTGT+GGG + chr4.2:7745489-7745508 MS.gene030522:intron 35.0%
ATAGATAGCAATCTGTGCAA+TGG - chr4.2:7746186-7746205 None:intergenic 35.0%
ATGTAAGTAATACTTGCAGC+CGG - chr4.2:7747312-7747331 None:intergenic 35.0%
ATTATGCTCACATTGAAGCA+GGG + chr4.2:7744025-7744044 MS.gene030522:CDS 35.0%
ATTTGAGTCCGTCAAATGTT+TGG + chr4.2:7746886-7746905 MS.gene030522:intron 35.0%
ATTTGTGATGCTGATAGAGA+TGG + chr4.2:7744102-7744121 MS.gene030522:CDS 35.0%
CATGAGTTTCTCTACTTATG+GGG - chr4.2:7744922-7744941 None:intergenic 35.0%
CCAAAAGCAAATAATGAGTG+TGG + chr4.2:7746695-7746714 MS.gene030522:intron 35.0%
CTATGAATTTGTATGGTGTG+TGG + chr4.2:7745396-7745415 MS.gene030522:intron 35.0%
CTGGATCAATGCTTGAAAAT+CGG - chr4.2:7745157-7745176 None:intergenic 35.0%
CTTACAAATTCAGACTGGAA+AGG + chr4.2:7745947-7745966 MS.gene030522:CDS 35.0%
CTTTGTTGAGCATGTTGATA+AGG + chr4.2:7745680-7745699 MS.gene030522:CDS 35.0%
GAACCCTTACAAAGGATATA+TGG + chr4.2:7746273-7746292 MS.gene030522:CDS 35.0%
GAAGAAGGAAACACAAGAAA+TGG + chr4.2:7746951-7746970 MS.gene030522:intron 35.0%
GAGAAAATGAAACAAGGGAA+TGG - chr4.2:7745586-7745605 None:intergenic 35.0%
GATTCGACTTCAATCTTTGA+TGG + chr4.2:7745440-7745459 MS.gene030522:intron 35.0%
GGATCCATATATCCTTTGTA+AGG - chr4.2:7746280-7746299 None:intergenic 35.0%
GTACGAAACAAGACAACAAT+CGG + chr4.2:7744889-7744908 MS.gene030522:intron 35.0%
GTATTCTTCCTGAAGAACTT+TGG + chr4.2:7744220-7744239 MS.gene030522:CDS 35.0%
GTGACATAATTAACAAGAGG+GGG - chr4.2:7744277-7744296 None:intergenic 35.0%
GTGGCAAAAATATCATACCA+TGG - chr4.2:7746430-7746449 None:intergenic 35.0%
TAATGAGTGTGGGATGATAT+CGG + chr4.2:7746706-7746725 MS.gene030522:intron 35.0%
TACTTGCTTACTTTATCGTG+TGG + chr4.2:7745488-7745507 MS.gene030522:intron 35.0%
TCTGTAGTCATTCATAGGTT+TGG + chr4.2:7745295-7745314 MS.gene030522:intron 35.0%
TGATCCATTGAAATTGAACC+GGG - chr4.2:7743910-7743929 None:intergenic 35.0%
TGGGAAAATATCTCATATGG+TGG + chr4.2:7744850-7744869 MS.gene030522:intron 35.0%
TTGTAGTGCCAAACATTTGA+CGG - chr4.2:7746897-7746916 None:intergenic 35.0%
TTTGTAACTTGGGACCAAAA+TGG + chr4.2:7747029-7747048 MS.gene030522:intron 35.0%
TTTGTGATGCTGATAGAGAT+GGG + chr4.2:7744103-7744122 MS.gene030522:CDS 35.0%
! AGCAGATATTTTATTGCAGG+GGG + chr4.2:7745867-7745886 MS.gene030522:CDS 35.0%
! AGGAGCAGATATTTTATTGC+AGG + chr4.2:7745864-7745883 MS.gene030522:CDS 35.0%
! CACAAAGGTTCCTTCTAAAA+TGG + chr4.2:7744830-7744849 MS.gene030522:intron 35.0%
! CCACACTCATTATTTGCTTT+TGG - chr4.2:7746698-7746717 None:intergenic 35.0%
! CCTTATTTGTGTCAAAGATG+CGG - chr4.2:7745182-7745201 None:intergenic 35.0%
! CTTTTCTTCTTCATAGAACC+TGG + chr4.2:7746542-7746561 MS.gene030522:intron 35.0%
! GAGCAGATATTTTATTGCAG+GGG + chr4.2:7745866-7745885 MS.gene030522:CDS 35.0%
! GGAGCAGATATTTTATTGCA+GGG + chr4.2:7745865-7745884 MS.gene030522:CDS 35.0%
! GTGAATGCATGTTTCTTTTG+AGG + chr4.2:7745326-7745345 MS.gene030522:intron 35.0%
! GTTAGTATGTTGTTGGTTGT+TGG + chr4.2:7744625-7744644 MS.gene030522:intron 35.0%
! TTTTGGTCCCAAGTTACAAA+TGG - chr4.2:7747029-7747048 None:intergenic 35.0%
!! ACATTTGACGGACTCAAATA+TGG - chr4.2:7746885-7746904 None:intergenic 35.0%
!! CGCTACTAATAAAGGGTATT+TGG + chr4.2:7744002-7744021 MS.gene030522:CDS 35.0%
!! GGCACTACAATTTGTTGATT+AGG + chr4.2:7746907-7746926 MS.gene030522:intron 35.0%
!! TAATGGGTTGAATGTTGTGA+AGG + chr4.2:7746034-7746053 MS.gene030522:CDS 35.0%
!! TGGATCCTTAAGTTGTTTTC+AGG - chr4.2:7747087-7747106 None:intergenic 35.0%
!!! AGGGAATGTCTGATGTTTTT+TGG + chr4.2:7747217-7747236 MS.gene030522:CDS 35.0%
!!! GCTTGTTACTTTTCCTTGAT+TGG + chr4.2:7744647-7744666 MS.gene030522:intron 35.0%
AAATCTCCTCAAAGTTGTGC+CGG + chr4.2:7747290-7747309 MS.gene030522:CDS 40.0%
AAGTCAGATATTGGTACTGC+CGG + chr4.2:7746131-7746150 MS.gene030522:CDS 40.0%
ACTTGCATTGCCTATGATTG+TGG + chr4.2:7744710-7744729 MS.gene030522:intron 40.0%
ATGAAGATATGGCAACGAGA+CGG + chr4.2:7745990-7746009 MS.gene030522:CDS 40.0%
ATTACATTGCCATGCTTCTC+AGG + chr4.2:7747157-7747176 MS.gene030522:intron 40.0%
CAACACTTCTAGTGCTTACA+AGG + chr4.2:7747197-7747216 MS.gene030522:CDS 40.0%
CAACATTCAACCCATTACCT+CGG - chr4.2:7746031-7746050 None:intergenic 40.0%
CAAGGGAACAAGTCAGATAT+TGG + chr4.2:7746122-7746141 MS.gene030522:CDS 40.0%
CACCTTCAAGTAGAAGTTCA+TGG - chr4.2:7745106-7745125 None:intergenic 40.0%
CATGAACTTCTACTTGAAGG+TGG + chr4.2:7745104-7745123 MS.gene030522:intron 40.0%
CCGCATCTTTGACACAAATA+AGG + chr4.2:7745179-7745198 MS.gene030522:intron 40.0%
CGTAAATTAAGGGACCAAAG+TGG - chr4.2:7746828-7746847 None:intergenic 40.0%
CTCTAGTACAACTTGGATGT+GGG + chr4.2:7746567-7746586 MS.gene030522:CDS 40.0%
CTTCATTACTGCTGGCATAA+TGG - chr4.2:7745976-7745995 None:intergenic 40.0%
CTTGGTATGATTCCTTATGC+AGG + chr4.2:7746344-7746363 MS.gene030522:CDS 40.0%
CTTGTTCTCCAATGTCTACA+AGG - chr4.2:7745809-7745828 None:intergenic 40.0%
GACCATGAACTTCTACTTGA+AGG + chr4.2:7745101-7745120 MS.gene030522:intron 40.0%
GAGGTTCTGTAGTCATTCAT+AGG + chr4.2:7745290-7745309 MS.gene030522:intron 40.0%
GATTATGCTCACATTGAAGC+AGG + chr4.2:7744024-7744043 MS.gene030522:CDS 40.0%
GGAATCATACCAAGAAGAGA+TGG - chr4.2:7746338-7746357 None:intergenic 40.0%
GGCTGCAAGTATTACTTACA+TGG + chr4.2:7747311-7747330 MS.gene030522:CDS 40.0%
GTCATTGTCTGTGATAGACA+TGG + chr4.2:7744409-7744428 MS.gene030522:intron 40.0%
TACCAAGAAGAGATGGAACA+AGG - chr4.2:7746331-7746350 None:intergenic 40.0%
TATCCTTTGTAAGGGTTCCT+AGG - chr4.2:7746271-7746290 None:intergenic 40.0%
TCCTTCTTCTTCTTCTTGCT+GGG - chr4.2:7746940-7746959 None:intergenic 40.0%
TCGACTTCAATCTTTGATGG+TGG + chr4.2:7745443-7745462 MS.gene030522:intron 40.0%
TCGTGTGGGATAATATGTTC+AGG + chr4.2:7745503-7745522 MS.gene030522:intron 40.0%
TGCAGGGATTGAAATTGATG+AGG + chr4.2:7745644-7745663 MS.gene030522:intron 40.0%
TGCCAGCAGTAATGAAGATA+TGG + chr4.2:7745979-7745998 MS.gene030522:CDS 40.0%
TGCCATATCTTCATTACTGC+TGG - chr4.2:7745984-7746003 None:intergenic 40.0%
TTCCTTCTTCTTCTTCTTGC+TGG - chr4.2:7746941-7746960 None:intergenic 40.0%
TTTGTAAGGGTTCCTAGGTT+CGG - chr4.2:7746266-7746285 None:intergenic 40.0%
! CTTGTAAGCACTAGAAGTGT+TGG - chr4.2:7747199-7747218 None:intergenic 40.0%
! GGTTTATTAGGGTTTTTCCG+AGG + chr4.2:7746011-7746030 MS.gene030522:CDS 40.0%
! GTGGTCTTACAAATTCAGAC+TGG + chr4.2:7745942-7745961 MS.gene030522:CDS 40.0%
! TAAGGTGGTATTCCCTTTTG+TGG + chr4.2:7745551-7745570 MS.gene030522:intron 40.0%
! TAGGGTTTTTCCGAGGTAAT+GGG + chr4.2:7746018-7746037 MS.gene030522:CDS 40.0%
! TTAGGGTTTTTCCGAGGTAA+TGG + chr4.2:7746017-7746036 MS.gene030522:CDS 40.0%
!! TAAGCACTAGAAGTGTTGGT+AGG - chr4.2:7747195-7747214 None:intergenic 40.0%
!! TCATATGGTGGATTGATGCT+TGG + chr4.2:7744862-7744881 MS.gene030522:intron 40.0%
!! TGCCGGTTCAGTAAAAAACA+AGG + chr4.2:7744981-7745000 MS.gene030522:intron 40.0%
!!! TTGAACCGGGTTTTTTTCCA+CGG - chr4.2:7743897-7743916 None:intergenic 40.0%
AAGTCACTGCCTCTTCTGTA+CGG + chr4.2:7745079-7745098 MS.gene030522:intron 45.0%
AATATGGAGACAAGGCAGGA+AGG - chr4.2:7746869-7746888 None:intergenic 45.0%
ACCACCTTTAGACGATCAAG+AGG - chr4.2:7745927-7745946 None:intergenic 45.0%
ACCCAGCAAGAAGAAGAAGA+AGG + chr4.2:7746936-7746955 MS.gene030522:intron 45.0%
ACTTGGATGTGGGACAGTTT+CGG + chr4.2:7746577-7746596 MS.gene030522:CDS 45.0%
AGGGTATGCCTTGTAGACAT+TGG + chr4.2:7745798-7745817 MS.gene030522:CDS 45.0%
CAAATGTTGAGAGACTGCAG+AGG + chr4.2:7745271-7745290 MS.gene030522:intron 45.0%
CACTGCAGGTTATTCGTACA+AGG + chr4.2:7746627-7746646 MS.gene030522:CDS 45.0%
CCACATCCAAGTTGTACTAG+AGG - chr4.2:7746569-7746588 None:intergenic 45.0%
CCTCTAGTACAACTTGGATG+TGG + chr4.2:7746566-7746585 MS.gene030522:CDS 45.0%
CGGACTCAAATATGGAGACA+AGG - chr4.2:7746877-7746896 None:intergenic 45.0%
CTCAAATATGGAGACAAGGC+AGG - chr4.2:7746873-7746892 None:intergenic 45.0%
CTCCAAACCCAAATCATCTC+CGG + chr4.2:7743846-7743865 MS.gene030522:CDS 45.0%
CTTGTACGAATAACCTGCAG+TGG - chr4.2:7746629-7746648 None:intergenic 45.0%
GAACAAGCTGTCATTCCTGA+AGG + chr4.2:7745822-7745841 MS.gene030522:CDS 45.0%
GAACCTAGGAACCCTTACAA+AGG + chr4.2:7746265-7746284 MS.gene030522:CDS 45.0%
GACCTATGAAGCTCATACAC+CGG + chr4.2:7744325-7744344 MS.gene030522:intron 45.0%
GCGTGAGACTAAGGAAGAAA+GGG + chr4.2:7743945-7743964 MS.gene030522:CDS 45.0%
GGCAACGAGACGGTTTATTA+GGG + chr4.2:7746000-7746019 MS.gene030522:CDS 45.0%
GTGAGATCAATGCCTGCATA+AGG - chr4.2:7746359-7746378 None:intergenic 45.0%
GTTACAGCAGCCACAATCAT+AGG - chr4.2:7744723-7744742 None:intergenic 45.0%
GTTTCTCTACTTATGGGGAG+AGG - chr4.2:7744917-7744936 None:intergenic 45.0%
TACTTGTGTCTATCCACTGC+AGG + chr4.2:7746613-7746632 MS.gene030522:CDS 45.0%
TCCTCTTGATCGTCTAAAGG+TGG + chr4.2:7745923-7745942 MS.gene030522:CDS 45.0%
TCGAAAGCCTTCGTCCTTAA+GGG - chr4.2:7747247-7747266 None:intergenic 45.0%
TGCGTGAGACTAAGGAAGAA+AGG + chr4.2:7743944-7743963 MS.gene030522:CDS 45.0%
TGCTCCTCTTGATCGTCTAA+AGG + chr4.2:7745920-7745939 MS.gene030522:CDS 45.0%
TGGAAAACCCTTAAGGACGA+AGG + chr4.2:7747237-7747256 MS.gene030522:CDS 45.0%
TGGCAACGAGACGGTTTATT+AGG + chr4.2:7745999-7746018 MS.gene030522:CDS 45.0%
TTAAGGACGAAGGCTTTCGA+GGG + chr4.2:7747247-7747266 MS.gene030522:CDS 45.0%
TTACAGACTTGTGCGTCTGA+AGG + chr4.2:7746230-7746249 MS.gene030522:CDS 45.0%
TTTATTGCAGGGGGAATAGC+AGG + chr4.2:7745876-7745895 MS.gene030522:CDS 45.0%
! AAGACTTTTTGCAGGTGGCA+TGG + chr4.2:7746154-7746173 MS.gene030522:CDS 45.0%
! AGAGCATCCCAAAGTTCTTC+AGG - chr4.2:7744231-7744250 None:intergenic 45.0%
! CATTAATATTGGTTGGGGGG+TGG + chr4.2:7744556-7744575 MS.gene030522:intron 45.0%
! CTTCTGATTGAAGGCGTGTT+TGG - chr4.2:7744449-7744468 None:intergenic 45.0%
! GGCACAACTTTGAGGAGATT+TGG - chr4.2:7747291-7747310 None:intergenic 45.0%
!! ACTTTGGGATGCTCTTGTCA+AGG + chr4.2:7744236-7744255 MS.gene030522:CDS 45.0%
!! ATTGGCTTTGCGTGAGACTA+AGG + chr4.2:7743936-7743955 MS.gene030522:CDS 45.0%
!! TAAAACTTGATGGCGCTCTC+AGG - chr4.2:7746065-7746084 None:intergenic 45.0%
!! TTTTCAAGGGTTGCTTCGTG+AGG - chr4.2:7745759-7745778 None:intergenic 45.0%
!!! TTTTTTTCCACGGCCGTGAT+CGG - chr4.2:7743887-7743906 None:intergenic 45.0%
AACAGTGATCCAATCGGTGC+CGG + chr4.2:7744964-7744983 MS.gene030522:intron 50.0%
AAGGCCTCTATAGAAAGCCC+GGG - chr4.2:7746312-7746331 None:intergenic 50.0%
AATCCCTGCAGCATCAAAGC+TGG - chr4.2:7745634-7745653 None:intergenic 50.0%
AGAAGTCGCCGGAGATGATT+TGG - chr4.2:7743857-7743876 None:intergenic 50.0%
AGGCTTTCGAGGGTTCTACA+AGG + chr4.2:7747257-7747276 MS.gene030522:CDS 50.0%
CAAGGCCTCTATAGAAAGCC+CGG - chr4.2:7746313-7746332 None:intergenic 50.0%
CCAAGTTGTACTAGAGGACC+AGG - chr4.2:7746563-7746582 None:intergenic 50.0%
CCTGGTCCTCTAGTACAACT+TGG + chr4.2:7746560-7746579 MS.gene030522:CDS 50.0%
CTAGAAATGCGCTGCTTGAG+AGG + chr4.2:7745205-7745224 MS.gene030522:intron 50.0%
CTCGAAAGCCTTCGTCCTTA+AGG - chr4.2:7747248-7747267 None:intergenic 50.0%
CTTAAGGACGAAGGCTTTCG+AGG + chr4.2:7747246-7747265 MS.gene030522:CDS 50.0%
CTTCTTCTTCTTGCTGGGTG+AGG - chr4.2:7746935-7746954 None:intergenic 50.0%
CTTGGATGTGGGACAGTTTC+GGG + chr4.2:7746578-7746597 MS.gene030522:CDS 50.0%
GAAGTCGCCGGAGATGATTT+GGG - chr4.2:7743856-7743875 None:intergenic 50.0%
GCCACCTGCAAAAAGTCTTC+CGG - chr4.2:7746153-7746172 None:intergenic 50.0%
GGCTTTCGAGGGTTCTACAA+GGG + chr4.2:7747258-7747277 MS.gene030522:CDS 50.0%
GTCCGGTGTATGAGCTTCAT+AGG - chr4.2:7744330-7744349 None:intergenic 50.0%
GTTCATGGTCCGTACAGAAG+AGG - chr4.2:7745091-7745110 None:intergenic 50.0%
TTGTGCGTCTGAAGGTGGAA+AGG + chr4.2:7746238-7746257 MS.gene030522:CDS 50.0%
! AAAGCCAGCTTTGATGCTGC+AGG + chr4.2:7745627-7745646 MS.gene030522:intron 50.0%
! AAGCCAGCTTTGATGCTGCA+GGG + chr4.2:7745628-7745647 MS.gene030522:intron 50.0%
! ACATGCTTGCTGATGCCTTC+AGG - chr4.2:7745840-7745859 None:intergenic 50.0%
! ACTGCCGGAAGACTTTTTGC+AGG + chr4.2:7746146-7746165 MS.gene030522:CDS 50.0%
! GCGCTGACACTTCTGATTGA+AGG - chr4.2:7744458-7744477 None:intergenic 50.0%
! TGCAGCATCAAAGCTGGCTT+TGG - chr4.2:7745628-7745647 None:intergenic 50.0%
!! GGCCTTGTTCCATCTCTTCT+TGG + chr4.2:7746326-7746345 MS.gene030522:CDS 50.0%
!! TTTACTGAACCGGCACCGAT+TGG - chr4.2:7744976-7744995 None:intergenic 50.0%
ACCCACGTGGTCCATGTCTA+TGG - chr4.2:7743824-7743843 None:intergenic 55.0%
ACTTCTCCGACCACCGATCA+CGG + chr4.2:7743871-7743890 MS.gene030522:CDS 55.0%
AGGCCTCTATAGAAAGCCCG+GGG - chr4.2:7746311-7746330 None:intergenic 55.0%
ATCGGCCTTCACAAGTCCCA+CGG - chr4.2:7745423-7745442 None:intergenic 55.0%
CACGGCCGTGGAAAAAAACC+CGG + chr4.2:7743889-7743908 MS.gene030522:CDS 55.0%
CAGACTTGTGCGTCTGAAGG+TGG + chr4.2:7746233-7746252 MS.gene030522:CDS 55.0%
GCATCAGCAAGCATGTGCAC+AGG + chr4.2:7745844-7745863 MS.gene030522:CDS 55.0%
GCCATAGACATGGACCACGT+GGG + chr4.2:7743820-7743839 MS.gene030522:CDS 55.0%
TATGGATCCAAGAGGGACCC+CGG + chr4.2:7746291-7746310 MS.gene030522:CDS 55.0%
TGGGATGCTCTTGTCAAGGC+TGG + chr4.2:7744240-7744259 MS.gene030522:CDS 55.0%
TGGGTTTGGAGAAACCCACG+TGG - chr4.2:7743837-7743856 None:intergenic 55.0%
TTGCAGCCGGCACAACTTTG+AGG - chr4.2:7747299-7747318 None:intergenic 55.0%
TTGTATGGTGTGTGGGCCGT+GGG + chr4.2:7745404-7745423 MS.gene030522:intron 55.0%
TTGTGTCAAAGATGCGGCGC+TGG - chr4.2:7745176-7745195 None:intergenic 55.0%
TTTGTATGGTGTGTGGGCCG+TGG + chr4.2:7745403-7745422 MS.gene030522:intron 55.0%
! CGCCGGAGATGATTTGGGTT+TGG - chr4.2:7743851-7743870 None:intergenic 55.0%
! CTTTTTGCAGGTGGCATGGC+TGG + chr4.2:7746158-7746177 MS.gene030522:CDS 55.0%
! GCCGGAAGACTTTTTGCAGG+TGG + chr4.2:7746149-7746168 MS.gene030522:CDS 55.0%
ATGGATCCAAGAGGGACCCC+GGG + chr4.2:7746292-7746311 MS.gene030522:CDS 60.0%
CGGACACGACACTGACACAC+CGG + chr4.2:7744345-7744364 MS.gene030522:intron 60.0%
CGGTGTGTCAGTGTCGTGTC+CGG - chr4.2:7744347-7744366 None:intergenic 60.0%
GGACCCCGGGCTTTCTATAG+AGG + chr4.2:7746305-7746324 MS.gene030522:CDS 60.0%
GGCCATAGACATGGACCACG+TGG + chr4.2:7743819-7743838 MS.gene030522:CDS 60.0%
GGGACAGTTTCGGGAGCTCT+TGG + chr4.2:7746587-7746606 MS.gene030522:CDS 60.0%
GGTGGAAAGGCTCCGAACCT+AGG + chr4.2:7746251-7746270 MS.gene030522:CDS 60.0%
TGCCATGCTTCTCAGGCTGC+AGG + chr4.2:7747164-7747183 MS.gene030522:intron 60.0%
! TTTTCCACGGCCGTGATCGG+TGG - chr4.2:7743884-7743903 None:intergenic 60.0%
AGAAAGCCCGGGGTCCCTCT+TGG - chr4.2:7746301-7746320 None:intergenic 65.0%
CGCCTGCAGCCTGAGAAGCA+TGG - chr4.2:7747169-7747188 None:intergenic 65.0%
GTGGGCCGTGGGACTTGTGA+AGG + chr4.2:7745415-7745434 MS.gene030522:intron 65.0%
TCGGTGGTCGGAGAAGTCGC+CGG - chr4.2:7743868-7743887 None:intergenic 65.0%
CCACGGCCGTGATCGGTGGT+CGG - chr4.2:7743880-7743899 None:intergenic 70.0%
CCGACCACCGATCACGGCCG+TGG + chr4.2:7743877-7743896 MS.gene030522:CDS 75.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 7743811 7747371 7743811 ID=MS.gene030522
chr4.2 mRNA 7743811 7747371 7743811 ID=MS.gene030522.t1;Parent=MS.gene030522
chr4.2 exon 7743811 7744261 7743811 ID=MS.gene030522.t1.exon1;Parent=MS.gene030522.t1
chr4.2 CDS 7743811 7744261 7743811 ID=cds.MS.gene030522.t1;Parent=MS.gene030522.t1
chr4.2 exon 7745649 7746431 7745649 ID=MS.gene030522.t1.exon2;Parent=MS.gene030522.t1
chr4.2 CDS 7745649 7746431 7745649 ID=cds.MS.gene030522.t1;Parent=MS.gene030522.t1
chr4.2 exon 7746558 7746648 7746558 ID=MS.gene030522.t1.exon3;Parent=MS.gene030522.t1
chr4.2 CDS 7746558 7746648 7746558 ID=cds.MS.gene030522.t1;Parent=MS.gene030522.t1
chr4.2 exon 7747179 7747371 7747179 ID=MS.gene030522.t1.exon4;Parent=MS.gene030522.t1
chr4.2 CDS 7747179 7747371 7747179 ID=cds.MS.gene030522.t1;Parent=MS.gene030522.t1
Gene Sequence

>MS.gene030522

ATGTCTGGGGCCATAGACATGGACCACGTGGGTTTCTCCAAACCCAAATCATCTCCGGCGACTTCTCCGACCACCGATCACGGCCGTGGAAAAAAACCCGGTTCAATTTCAATGGATCATGTTCTATTGGCTTTGCGTGAGACTAAGGAAGAAAGGGATGTTCGTATTCGGAGTTTATTCAATTTCTTTGACGCTACTAATAAAGGGTATTTGGATTATGCTCACATTGAAGCAGGGTTATCTGCACTTCAGATTCCACCTGAATATAAATACGCTAAGGAGCTTTTTAAGATTTGTGATGCTGATAGAGATGGGAGAATTGATTATCATGATTTTAGACGGTATATGGATGATAAAGAACTTGAACTTTATAGAATTTTTCAAGCTATTGATGTTGAACATAATGGTTGTATTCTTCCTGAAGAACTTTGGGATGCTCTTGTCAAGGCTGGTATTCTTTTATCCCCCTCTTGTTAATTATGTCACTTACTTTGTTAATTATGTTTTTTCATCTGACCTATGAAGCTCATACACCGGACACGACACTGACACACCGGTTATAATTTTAAAAAATGGCATAATTGAAGTAATCGCATGTGTCATTGTCTGTGATAGACATGGACACATGTCAGACACCAAACACGCCTTCAATCAGAAGTGTCAGCGCTACATATTTTATAACAAATAGGGAGGCTAAGTATAATTATCACTATAGTAAATTTTTTTTTGAACAAGCTATAGTAAACATTAATATTGGTTGGGGGGTGGTATTGCTGTCTCTTTCATCCATTGCATGCTTATTCCTTTTTTTGATGTTAGTATGTTGTTGGTTGTTGGCTTGTTACTTTTCCTTGATTGGGACAAGAAATGTTGATATTTGATGTTGCTCTTTAACTCAAACTTGCATTGCCTATGATTGTGGCTGCTGTAACTGCAACCTTGCTCGAAGAAACTTAGATTGTAGTTGTATATAAGTATTTGTAGATTCTATGCAACCTTTTCTAAATGAGATTGAGTTTCACAAAGGTTCCTTCTAAAATGGGAAAATATCTCATATGGTGGATTGATGCTTGGATTTGTACGAAACAAGACAACAATCGGTGCCTCTCCCCATAAGTAGAGAAACTCATGTATTACTTGTACATACAATTGAAACAGTGATCCAATCGGTGCCGGTTCAGTAAAAAACAAGGAAAATGAACAATAGAGCATCAAAACACAACCTATATCCGTTTTCTCTTGTTTTTATTAAATTAATAACATCGATCAAGTCACTGCCTCTTCTGTACGGACCATGAACTTCTACTTGAAGGTGGTGACGTTGATCGATGCCAAAGTTTTGACCGATTTTCAAGCATTGATCCAGCGCCGCATCTTTGACACAAATAAGGAAGCTAGAAATGCGCTGCTTGAGAGGTCATTCGTAGCCATAGTTATAACTCATATATATCATGCGTGAACAAATGTTGAGAGACTGCAGAGGTTCTGTAGTCATTCATAGGTTTGGTAAACCTTGTGAATGCATGTTTCTTTTGAGGATGTTGTGTTGCTTATAGAAAAAATTTCAAAGGAAATTTGTAAATAACTATGAATTTGTATGGTGTGTGGGCCGTGGGACTTGTGAAGGCCGATTCGACTTCAATCTTTGATGGTGGATTCTATATATGTTTACTCAATTACTTGCTTACTTTATCGTGTGGGATAATATGTTCAGGCATTATTATTTATATACTAGGTCTTTAAGGTGGTATTCCCTTTTGTGGAAGATTTTTCCATTCCCTTGTTTCATTTTCTCATTGTAGTATTTATCATAACCAAAGCCAGCTTTGATGCTGCAGGGATTGAAATTGATGAGGTTGAACTTGCGCGCTTTGTTGAGCATGTTGATAAGGATAATAATGGAATTATCACTTTTGAAGAATGGAGAGATTTTCTTCTTCTTTATCCTCACGAAGCAACCCTTGAAAATATATATCAACATTGGGAGAGGGTATGCCTTGTAGACATTGGAGAACAAGCTGTCATTCCTGAAGGCATCAGCAAGCATGTGCACAGGAGCAGATATTTTATTGCAGGGGGAATAGCAGGAGCTGCTTCTCGCACAGCAACTGCTCCTCTTGATCGTCTAAAGGTGGTCTTACAAATTCAGACTGGAAAGGCATCCATTATGCCAGCAGTAATGAAGATATGGCAACGAGACGGTTTATTAGGGTTTTTCCGAGGTAATGGGTTGAATGTTGTGAAGGTTGCACCTGAGAGCGCCATCAAGTTTTATGCTTATGAAATGCTGAAAAATGTAATTGGAGATAGTCAAGGGAACAAGTCAGATATTGGTACTGCCGGAAGACTTTTTGCAGGTGGCATGGCTGGTGCCATTGCACAGATTGCTATCTATCCATTGGATCTTATCAAAACTAGGTTACAGACTTGTGCGTCTGAAGGTGGAAAGGCTCCGAACCTAGGAACCCTTACAAAGGATATATGGATCCAAGAGGGACCCCGGGCTTTCTATAGAGGCCTTGTTCCATCTCTTCTTGGTATGATTCCTTATGCAGGCATTGATCTCACTGCTTATGACACCTTGAAAGATATATCCAAGAAATATATTATATCTGACCATGGTATGATATTTTTGCCACTCTTGATCTCTTTAACTTATTTAATTTCGTTTGTACACCTTATATTCTTATTGATAAATTGACACTTCTAGCATATTTAACCTTTTTATGCTCTTTTCTTCTTCATAGAACCTGGTCCTCTAGTACAACTTGGATGTGGGACAGTTTCGGGAGCTCTTGGAGCTACTTGTGTCTATCCACTGCAGGTTATTCGTACAAGGTATTGTTTTGTGCCATAAGTAATGTTTTTCTCTGGTCTTCTCGCCCCAAAAGCAAATAATGAGTGTGGGATGATATCGGTTTTGTTCTTGATAGCTAGCTTTATAATGGCTAACTTGCACTTATATGTCCTTTAGTTATTTTAGGTTTCCCTTTGGTCCTTAAGTTTTTTTTGTTCCACTTTGGTCCCTTAATTTACGAATGTTAGACATTTTGGTCCTTCCTGCCTTGTCTCCATATTTGAGTCCGTCAAATGTTTGGCACTACAATTTGTTGATTAGGAGCCTCACCCAGCAAGAAGAAGAAGAAGGAAACACAAGAAATGGGAACATTTGACAGACTCAAATGAAAAACTGAAAGAAAGGACAAAAATCTGTACCATTTGTAACTTGGGACCAAAATGGAACGAAAAAAAACTTAAGGGACCAAAGTAAAACCTGAAAACAACTTAAGGATCCAAAATAAAATTTAACCTTTTAGAATTTATACAATGTATGTTCTTTAATTACATTACATTGCCATGCTTCTCAGGCTGCAGGCGCAACCTACCAACACTTCTAGTGCTTACAAGGGAATGTCTGATGTTTTTTGGAAAACCCTTAAGGACGAAGGCTTTCGAGGGTTCTACAAGGGACTCATTCCAAATCTCCTCAAAGTTGTGCCGGCTGCAAGTATTACTTACATGGTTTATGAAAATATGAAGAAGAATTTAGATCTTGATTAG
Protein sequence

>MS.gene030522.t1

MSGAIDMDHVGFSKPKSSPATSPTTDHGRGKKPGSISMDHVLLALRETKEERDVRIRSLFNFFDATNKGYLDYAHIEAGLSALQIPPEYKYAKELFKICDADRDGRIDYHDFRRYMDDKELELYRIFQAIDVEHNGCILPEELWDALVKAGIEIDEVELARFVEHVDKDNNGIITFEEWRDFLLLYPHEATLENIYQHWERVCLVDIGEQAVIPEGISKHVHRSRYFIAGGIAGAASRTATAPLDRLKVVLQIQTGKASIMPAVMKIWQRDGLLGFFRGNGLNVVKVAPESAIKFYAYEMLKNVIGDSQGNKSDIGTAGRLFAGGMAGAIAQIAIYPLDLIKTRLQTCASEGGKAPNLGTLTKDIWIQEGPRAFYRGLVPSLLGMIPYAGIDLTAYDTLKDISKKYIISDHEPGPLVQLGCGTVSGALGATCVYPLQVIRTRLQAQPTNTSSAYKGMSDVFWKTLKDEGFRGFYKGLIPNLLKVVPAASITYMVYENMKKNLDLD